Citrus Sinensis ID: 005365
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 700 | 2.2.26 [Sep-21-2011] | |||||||
| P13708 | 805 | Sucrose synthase OS=Glyci | yes | no | 1.0 | 0.869 | 0.814 | 0.0 | |
| Q01390 | 805 | Sucrose synthase OS=Vigna | N/A | no | 1.0 | 0.869 | 0.809 | 0.0 | |
| P31926 | 806 | Sucrose synthase OS=Vicia | N/A | no | 1.0 | 0.868 | 0.808 | 0.0 | |
| O65026 | 805 | Sucrose synthase OS=Medic | N/A | no | 1.0 | 0.869 | 0.798 | 0.0 | |
| Q9LXL5 | 808 | Sucrose synthase 4 OS=Ara | yes | no | 0.998 | 0.865 | 0.789 | 0.0 | |
| P49034 | 803 | Sucrose synthase OS=Alnus | N/A | no | 0.995 | 0.867 | 0.792 | 0.0 | |
| P49040 | 808 | Sucrose synthase 1 OS=Ara | no | no | 0.998 | 0.865 | 0.781 | 0.0 | |
| P10691 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.869 | 0.764 | 0.0 | |
| P49037 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.869 | 0.761 | 0.0 | |
| P49039 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.869 | 0.762 | 0.0 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/750 (81%), Positives = 660/750 (88%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+
Sbjct: 1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQ 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVHALVVEEL AEYLHFKE
Sbjct: 61 KLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFNA+FPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR+H KGK +MLNDRIQN ++LQHVLRKAEEYL TV PETP+SE +FQEIGLERGW
Sbjct: 181 FLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GD AER LE IQLLLDLLEAPDPCTLETFLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTG
Sbjct: 241 GDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EML RIKQQGLDI P+ILIITRLLPDAVGTTCGQRLEKV+GT++S
Sbjct: 301 GQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA E+AKELQGKPDLI+GNYSDGNIVA
Sbjct: 361 HILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYP+SDIYWK L+++YHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD +IYFP+TE RR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L SFHPEIEELLYS VEN+EH+
Sbjct: 541 LTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR IC
Sbjct: 601 LVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DT+GAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA+
Sbjct: 661 DTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+LVDFFEKCK DP++WDKIS GL+RIEEK
Sbjct: 721 LLVDFFEKCKLDPTHWDKISKAGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|Q01390|SUSY_VIGRR Sucrose synthase OS=Vigna radiata var. radiata GN=SS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/750 (80%), Positives = 654/750 (87%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA LTRVHSLRERLDETLSA+RNEILALLSRIEGKGKGILQ+HQ+IAEFE I EE+R+
Sbjct: 1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQ 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVHALVVE L AEYL FKE
Sbjct: 61 KLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR+H KGK +MLNDRIQN ++LQHVLRKAEEYL TV PETP+S +FQEIGLERGW
Sbjct: 181 FLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSAFEHKFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GD AER LE IQLLLDLLEAPDPCTLETFLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTG
Sbjct: 241 GDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EML RIKQQGLDI P+ILIITRLLPDAVGTTCGQRLEKV+GT++S
Sbjct: 301 GQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFRTE G+VRKWISRFEVWPYLETYTEDVA E+AKELQGKPDLI+GNYSDGNIVA
Sbjct: 361 HILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYP+SDIYWK L+++YHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD +IYFP+TE RR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L SFH EIEELLYS VEN+EH+
Sbjct: 541 LTSFHTEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKMYSLI+ YKLNGQFRWISSQMNRVRNGELYR I
Sbjct: 601 LVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIA 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA+
Sbjct: 661 DTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+LV+FFEK K DPS+WDKIS GL+RIEEK
Sbjct: 721 LLVEFFEKVKVDPSHWDKISQAGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vigna radiata var. radiata (taxid: 3916) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P31926|SUSY_VICFA Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/750 (80%), Positives = 654/750 (87%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+
Sbjct: 1 MATERLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQ 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVHALVVE L AE+L FKE
Sbjct: 61 KLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLE
Sbjct: 121 ELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR+H +KGK +MLNDRIQN +SLQHVLRKAEEYL+TV PETP+SE RFQEIGLERGW
Sbjct: 181 FLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTVDPETPYSEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GD+AER LE IQLLLDLLEAPDPCTLETFL RIPMVFNVVIL+PHGYFAQDDVLGYPDTG
Sbjct: 241 GDSAERVLESIQLLLDLLEAPDPCTLETFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE EML RIK+QGLDI P+ILIITRLLPDAVGTTCGQRLEKVYGT++
Sbjct: 301 GQVVYILDQVRALESEMLNRIKKQGLDIVPRILIITRLLPDAVGTTCGQRLEKVYGTEHC 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFR +KG+VRKWISRFEVWPYLETYTEDVA E+AKELQGKPDLI+GNYSDGNIVA
Sbjct: 361 HILRVPFRDQKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYP+SDIYWK ++KYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD +IYFPYTE RR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L SF+PEIEELLYS VEN+EH+
Sbjct: 541 LTSFYPEIEELLYSTVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR IC
Sbjct: 601 LVNLVVVAGDRRKESKDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPA+YEAFGLTVVEAM GLPTFAT GGPAEIIV+GKSG+HIDPYHG++AA+
Sbjct: 661 DTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+LV+FFEK KADPS+WDKISLGGL+RIEEK
Sbjct: 721 LLVEFFEKVKADPSHWDKISLGGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vicia faba (taxid: 3906) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|O65026|SUSY_MEDSA Sucrose synthase OS=Medicago sativa PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1233 bits (3189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/750 (79%), Positives = 649/750 (86%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA LTRVHSL+ERLDETL+A+RNEILALLSR+E KGKGILQ+HQ+IAEFE I EE+R+
Sbjct: 1 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQ 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPG+WEY+RVNVHALVVE L AE+L FKE
Sbjct: 61 KLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV FLNRHLSAKLFHDKES+HPLLE
Sbjct: 121 ELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR+H +KGK +MLNDRIQN +SLQHVLRKAEEYL+T+ PETP+SE RFQEIGLERGW
Sbjct: 181 FLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTIDPETPYSEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LE IQLLLDLLEAPDPCTLE+FL RIPMVFNVVIL+PHGYFAQDDVLGYPDTG
Sbjct: 241 GDTAERVLESIQLLLDLLEAPDPCTLESFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE EML RIK+QGLDI P+ILIITRLLPDAVGTTCGQRLEKVYGT++
Sbjct: 301 GQVVYILDQVRALESEMLSRIKKQGLDIIPRILIITRLLPDAVGTTCGQRLEKVYGTEHC 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFR EKG+VRKWISRFEVWPYLETYTEDVA E+AKELQ KPDLI+GNYSDGNIVA
Sbjct: 361 HILRVPFRDEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQSKPDLIVGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYP+SDIYWK ++KYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKD VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD +IYFPYTE RR
Sbjct: 481 FQEIAGSKDKVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L SF+PEIEELLYS VEN+EH+
Sbjct: 541 LTSFYPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR IC
Sbjct: 601 LVNLVVVAGDRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPA+YEAFGLTVVEAM GLPTFAT GGPAEIIV+GKSG+HIDPYHG++AA+
Sbjct: 661 DTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+LV+FFEK KADPS+WDKIS GGL+RIEEK
Sbjct: 721 LLVEFFEKVKADPSHWDKISQGGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Medicago sativa (taxid: 3879) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q9LXL5|SUS4_ARATH Sucrose synthase 4 OS=Arabidopsis thaliana GN=SUS4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/749 (78%), Positives = 645/749 (86%), Gaps = 50/749 (6%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERLD TL A +NE+ ALLSR+E KGKGILQ+HQ+IAEFE++ E +K
Sbjct: 4 AERVITRVHSQRERLDATLVAQKNEVFALLSRVEAKGKGILQHHQIIAEFEAMPLETQKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEE 121
L GAF E LR+ QEAIVLPP+VALAVRPRPGVWEY+RVN+H LVVEEL +EYL FKEE
Sbjct: 64 LKGGAFFEFLRSAQEAIVLPPFVALAVRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNA+FPRPTL+K IG+GVEFLNRHLSAKLFHDKES+HPLL+F
Sbjct: 124 LVDGIKNGNFTLELDFEPFNAAFPRPTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GK +MLN+RIQNLN+LQH LRKAEEYL + PET +SE +FQEIGLERGWG
Sbjct: 184 LRLHSHEGKTLMLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWG 243
Query: 242 DTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
DTAER L MI+LLLDLLEAPDPCTLE FLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DTAERVLNMIRLLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+ITP+ILIITRLLPDA GTTCGQRLEKVYG++Y D
Sbjct: 304 QVVYILDQVRALETEMLQRIKQQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLET+TEDVA EI+KELQGKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LD+KYHFSCQFTADLIAMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSKDTVGQYESH +FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF YTEEKRRL
Sbjct: 484 QEIAGSKDTVGQYESHRSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHL--------------------------------------- 562
+FH EIEELLYSDVEN+EHL
Sbjct: 544 TAFHLEIEELLYSDVENEEHLCVLKDKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLREL 603
Query: 563 -----------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 611
KES+D EE+AEMKKMY LI++YKLNGQFRWISSQMNRVRNGELYRYICD
Sbjct: 604 VNLVVVGGDRRKESQDNEEKAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICD 663
Query: 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671
TKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AAE
Sbjct: 664 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAES 723
Query: 672 LVDFFEKCKADPSYWDKISLGGLKRIEEK 700
L DFF KCK DPS+WD+ISLGGL+RI+EK
Sbjct: 724 LADFFTKCKHDPSHWDQISLGGLERIQEK 752
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49034|SUSY_ALNGL Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1209 bits (3127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/751 (79%), Positives = 646/751 (86%), Gaps = 54/751 (7%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAER LTRVHSLRERLDETL A+RNEI+ALLSRI GKGKGI +NHQLIAE E+I E RK
Sbjct: 1 MAERVLTRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAIPEATRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L +GAFGEVLR+ QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL V EYLHFKE
Sbjct: 61 KLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG +NGNFVLELDF+PFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSTNGNFVLELDFDPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHC+KGKNMMLNDRIQN+N+LQ+VLRKAEEYLTT+ PETP+ + +FQEIGL RGW
Sbjct: 181 FLRVHCYKGKNMMLNDRIQNVNALQYVLRKAEEYLTTIAPETPYVKFEHKFQEIGLVRGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAE LEMIQLLL LLEAP PCTLE FLG+ + NVVI++PHGYFAQD+V GYPDTG
Sbjct: 241 GDTAEGVLEMIQLLLVLLEAPVPCTLEKFLGK-SLWLNVVIMSPHGYFAQDNV-GYPDTG 298
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE EMLLRIKQQGLDITP+ILI+TRLLPDAVGTTCGQRLE+VYG++++
Sbjct: 299 GQVVYILDQVRALESEMLLRIKQQGLDITPRILIVTRLLPDAVGTTCGQRLERVYGSEHA 358
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VR+WISRFEVWPYLETYTEDV VE+ KELQGKPDLIIGNYSDGNIVA
Sbjct: 359 DILRVPFRTEKGIVRQWISRFEVWPYLETYTEDVGVELIKELQGKPDLIIGNYSDGNIVA 418
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHK GVTQCT AHALEKTKYP+SDIYWK +D+KYHFS QFTADLIAMNHTDFIITST
Sbjct: 419 SLLAHKFGVTQCTHAHALEKTKYPESDIYWKKMDEKYHFSSQFTADLIAMNHTDFIITST 478
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVH + + DPKFNIVSPGADMSIYFPYTE+++R
Sbjct: 479 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHELCI-DPKFNIVSPGADMSIYFPYTEKEKR 537
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L SFHPEIEELLYS VEN+EHL
Sbjct: 538 LTSFHPEIEELLYSPVENEEHLCVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNTRLRE 597
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKD EE+AEM KM+ LI+ YKLNGQFRWISSQMNRVRNGELYRYI
Sbjct: 598 LVNLVVVAGNLEKESKDNEEKAEMTKMHGLIETYKLNGQFRWISSQMNRVRNGELYRYIA 657
Query: 611 DTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669
DTKG PA+YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA
Sbjct: 658 DTKGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAA 717
Query: 670 EILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
++LVDFFEK KADPS+W KISLGGL+RI EK
Sbjct: 718 QLLVDFFEKTKADPSHWAKISLGGLQRIHEK 748
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Alnus glutinosa (taxid: 3517) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49040|SUS1_ARATH Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/749 (78%), Positives = 645/749 (86%), Gaps = 50/749 (6%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEE 121
L G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+HALVVEEL AE+LHFKEE
Sbjct: 64 LEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+F
Sbjct: 124 LVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GKN+ML+++IQNLN+LQH LRKAEEYL + ET + E +F+EIGLERGWG
Sbjct: 184 LRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG 243
Query: 242 DTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
D AER L+MI+LLLDLLEAPDPCTLETFLGR+PMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+I P+ILI+TRLLPDAVGTTCG+RLE+VY ++Y D
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLETYTED AVE++KEL GKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTAD+ AMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSK+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL
Sbjct: 484 QEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHL--------------------------------------- 562
FH EIEELLYSDVENKEHL
Sbjct: 544 TKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL 603
Query: 563 -----------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 611
KESKD EE+AEMKKMY LI++YKLNGQFRWISSQM+RVRNGELYRYICD
Sbjct: 604 ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICD 663
Query: 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671
TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+
Sbjct: 664 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADT 723
Query: 672 LVDFFEKCKADPSYWDKISLGGLKRIEEK 700
L DFF KCK DPS+WD+IS GGL+RIEEK
Sbjct: 724 LADFFTKCKEDPSHWDEISKGGLQRIEEK 752
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P10691|SUS1_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/750 (76%), Positives = 636/750 (84%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAER LTRVHSLRER+D TL+AHRNEIL LSRIE GKGIL+ H+L+AEF++I ++++
Sbjct: 1 MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKN 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L E AF E+L++TQEAIVLPPWVALA+R RPGVWEYIRVNV+ALVVEEL V EYL FKE
Sbjct: 61 KLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPEYLQFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLE
Sbjct: 121 ELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR H +KGK MMLNDRIQN N+LQ+VLRKAEEYL + PETP+ E +FQEIGLE+GW
Sbjct: 181 FLRAHHYKGKTMMLNDRIQNSNTLQNVLRKAEEYLIMLPPETPYFEFEHKFQEIGLEKGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEM+ +LLDLLEAPD CTLE FLGRIPMVFNVVIL+PHGYFAQ++VLGYPDTG
Sbjct: 241 GDTAERVLEMVCMLLDLLEAPDSCTLEKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQV ALE EML RIK+QGLDI P+ILI+TRLLPDAVGTTCGQR+EKVYG ++S
Sbjct: 301 GQVVYILDQVPALEREMLKRIKEQGLDIIPRILIVTRLLPDAVGTTCGQRIEKVYGAEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFRTEKG+VRKWISRFEVWPY+ET+ EDVA EI+ ELQ KPDLIIGNYS+GN+ A
Sbjct: 361 HILRVPFRTEKGIVRKWISRFEVWPYMETFIEDVAKEISAELQAKPDLIIGNYSEGNLAA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK D+KYHFS QFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSSQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESH AFT+PGLYRVVHGI+VFDPKFNIVSPGAD+++YF Y+E ++R
Sbjct: 481 FQEIAGSKDTVGQYESHMAFTMPGLYRVVHGINVFDPKFNIVSPGADINLYFSYSETEKR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L +FHPEI+ELLYSDVEN EHL
Sbjct: 541 LTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRG 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI
Sbjct: 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIA 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT GGPAEIIV+GKSG+HIDPYHGEQAA+
Sbjct: 661 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+L DFFEKCK DPS+W+ IS+GGLKRIEEK
Sbjct: 721 LLADFFEKCKKDPSHWETISMGGLKRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49037|SUSY_SOLLC Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/750 (76%), Positives = 633/750 (84%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAER LTRVH LRER+D TL AHRNEIL LSRIE GKGIL+ H+L+AEF++I ++++
Sbjct: 1 MAERVLTRVHRLRERVDATLCAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKD 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L E AF E+L++TQEAIVLPPWVALA+R RPGVWEY+RVNV+ALVVEEL V EYL FKE
Sbjct: 61 KLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALVVEELSVPEYLQFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLE
Sbjct: 121 ELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMAPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR H +KGK MMLNDRI N N+LQ+VLRKAEEYL + PETPF E +FQEIGLE+GW
Sbjct: 181 FLRAHHYKGKTMMLNDRIHNSNTLQNVLRKAEEYLIMLPPETPFFEFEHKFQEIGLEKGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEM+ +LLDLLEAPD CTLE FLGRIPMVFNVVIL+PHGYFAQ++VLGYPDTG
Sbjct: 241 GDTAERVLEMVCMLLDLLEAPDSCTLEKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQV ALE EML RIK+QGLDI P+ILI+TRLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVPALEREMLKRIKEQGLDIIPRILIVTRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPF TEKG+VRKWISRFEVWPY+ET+ EDVA EI+ ELQ KPDLIIGNYS+GN+ A
Sbjct: 361 HILRVPFGTEKGIVRKWISRFEVWPYMETFIEDVAKEISAELQAKPDLIIGNYSEGNLAA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK D+KYHFS QFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSSQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESH AFT+PGLYRVVHGI+VFDPKFNIVSPGAD+++YFPY+E ++R
Sbjct: 481 FQEIAGSKDTVGQYESHMAFTMPGLYRVVHGINVFDPKFNIVSPGADINLYFPYSESEKR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L +FHPEI+ELLYSDVEN EHL
Sbjct: 541 LTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRG 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI
Sbjct: 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIA 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT GGPAEIIV+GKSG+HIDPYHGEQAA+
Sbjct: 661 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+L DFFEKCK +PS+W+ IS GGLKRI+EK
Sbjct: 721 LLADFFEKCKKEPSHWETISTGGLKRIQEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49039|SUS2_SOLTU Sucrose synthase OS=Solanum tuberosum PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/750 (76%), Positives = 634/750 (84%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAER LTRVHSLRERLD TL+AHRNEIL LSRIE GKGIL+ HQL+AEFESI +E++
Sbjct: 1 MAERVLTRVHSLRERLDATLAAHRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKD 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L + AF EVL++TQEAIVLPPWVALA+R RPGVWEY+RVNV+AL+VEEL V E+L FKE
Sbjct: 61 KLNDHAFEEVLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALIVEELTVPEFLQFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELV+G SN NFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLE
Sbjct: 121 ELVNGTSNDNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVH +KGK MMLNDRIQNL +LQ VLRKAEEYLTT+ PET +S +FQEIGLERGW
Sbjct: 181 FLRVHHYKGKTMMLNDRIQNLYTLQKVLRKAEEYLTTLSPETSYSAFEHKFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMI +LLDLLEAPD CTLE FLGRIPMVFNVVIL+PHGYFAQ++VLGYPDTG
Sbjct: 241 GDTAERVLEMICMLLDLLEAPDSCTLEKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQV ALE EML RIK+QGLDI P+ILI+TRLLPDAVGTTCGQRLEKV+GT++S
Sbjct: 301 GQVVYILDQVPALEREMLKRIKEQGLDIKPRILIVTRLLPDAVGTTCGQRLEKVFGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFRTEKG+VRKWISRFEVWPY+ET+ EDV EI ELQ KPDLIIGNYS+GN+ A
Sbjct: 361 HILRVPFRTEKGIVRKWISRFEVWPYMETFIEDVGKEITAELQAKPDLIIGNYSEGNLAA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIY D+KYHFS QFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYLNKFDEKYHFSAQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGAD+++YFPY+E+++R
Sbjct: 481 FQEIAGSKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADVNLYFPYSEKEKR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
L +FHPEIE+LL+SDVEN+EHL
Sbjct: 541 LTTFHPEIEDLLFSDVENEEHLCVLKDRNKPIIFTMARLDRVKNLTGLVEWYAKNPRLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEEQAEMKKMY LI + LNGQFRWISSQMNRVRNGELYRYI
Sbjct: 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYELIKTHNLNGQFRWISSQMNRVRNGELYRYIA 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DT+GAFVQPA YEAFGLTVVEAM+CGLPTFAT +GGPAEIIV+GKSG+ IDPYHGEQAA+
Sbjct: 661 DTRGAFVQPAFYEAFGLTVVEAMSCGLPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+L DFFEKCK DPS+W+ IS GGLKRI+EK
Sbjct: 721 LLADFFEKCKVDPSHWEAISEGGLKRIQEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 700 | ||||||
| 6683114 | 805 | sucrose synthase [Citrus unshiu] | 1.0 | 0.869 | 0.930 | 0.0 | |
| 6682843 | 805 | sucrose synthase [Citrus unshiu] | 1.0 | 0.869 | 0.928 | 0.0 | |
| 345104483 | 805 | sucrose synthase Sus1 [Gossypium musteli | 1.0 | 0.869 | 0.852 | 0.0 | |
| 324984225 | 805 | sucrose synthase [Gossypium herbaceum su | 1.0 | 0.869 | 0.852 | 0.0 | |
| 359357829 | 805 | sucrose synthase 3 [Gossypium arboreum] | 1.0 | 0.869 | 0.850 | 0.0 | |
| 324984229 | 805 | sucrose synthase [Gossypium hirsutum] | 1.0 | 0.869 | 0.850 | 0.0 | |
| 324984221 | 805 | sucrose synthase [Gossypium barbadense] | 1.0 | 0.869 | 0.850 | 0.0 | |
| 345104479 | 805 | sucrose synthase Sus1 [Gossypium schwend | 1.0 | 0.869 | 0.849 | 0.0 | |
| 345104513 | 805 | sucrose synthase Sus1 [Gossypium klotzsc | 1.0 | 0.869 | 0.849 | 0.0 | |
| 345104515 | 805 | sucrose synthase Sus1 [Gossypium aridum] | 1.0 | 0.869 | 0.848 | 0.0 |
| >gi|6683114|dbj|BAA89049.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1427 bits (3693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/750 (93%), Positives = 699/750 (93%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK
Sbjct: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE
Sbjct: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTV PETPFSELALRFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVAPETPFSELALRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG
Sbjct: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQV+YILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS
Sbjct: 301 GQVIYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LKSFHPEIEELLYSDVENKEHL
Sbjct: 541 LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC
Sbjct: 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCKADPSYWDKISLGGLKRIEEK
Sbjct: 721 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 750
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6682843|dbj|BAA88905.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1419 bits (3674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/750 (92%), Positives = 698/750 (93%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK
Sbjct: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
HLTEGAFGEVLRATQEAIVL PWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE
Sbjct: 61 HLTEGAFGEVLRATQEAIVLAPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDV+GYPDTG
Sbjct: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVVGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS
Sbjct: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LKSFHPEIEELLYSDVENKEHL
Sbjct: 541 LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEEQAEMKKMYSLIDQ KLNGQFRWISSQMNRVRNGELYRYIC
Sbjct: 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQNKLNGQFRWISSQMNRVRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
+TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE
Sbjct: 661 ETKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCKADPSYWDKISLGGLKRIEEK
Sbjct: 721 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 750
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104483|gb|AEN71063.1| sucrose synthase Sus1 [Gossypium mustelinum] gi|345104487|gb|AEN71065.1| sucrose synthase Sus1 [Gossypium darwinii] gi|345104495|gb|AEN71069.1| sucrose synthase Sus1 [Gossypium barbadense var. brasiliense] gi|345104499|gb|AEN71071.1| sucrose synthase Sus1 [Gossypium barbadense var. peruvianum] gi|345104503|gb|AEN71073.1| sucrose synthase Sus1 [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
|---|
Score = 1313 bits (3397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/750 (85%), Positives = 671/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA+R +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MADRVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLANGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAERVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FHPEIE+LLYS VEN+EHL
Sbjct: 541 LKHFHPEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LID+Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIDKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium mustelinum Species: Gossypium mustelinum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|324984225|gb|ADY68846.1| sucrose synthase [Gossypium herbaceum subsp. africanum] | Back alignment and taxonomy information |
|---|
Score = 1313 bits (3397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/750 (85%), Positives = 671/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA+R +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MADRVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLANGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAERVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FHPEIE+LLYS VEN+EHL
Sbjct: 541 LKHFHPEIEDLLYSKVENEEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LID+Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIDKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium herbaceum subsp. africanum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359357829|gb|AEV40462.1| sucrose synthase 3 [Gossypium arboreum] gi|392050914|gb|AFM52234.1| putative sucrose synthase 3 [Gossypium arboreum] | Back alignment and taxonomy information |
|---|
Score = 1311 bits (3393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/750 (85%), Positives = 671/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA+R +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MADRVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLANGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAERVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILII+RLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIISRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FHPEIE+LLYS VEN+EHL
Sbjct: 541 LKHFHPEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LID+Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIDKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium arboreum Species: Gossypium arboreum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|324984229|gb|ADY68848.1| sucrose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/750 (85%), Positives = 670/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA+R +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MADRVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLANGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAERVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+E LLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVRALENETLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FHPEIE+LLYS VEN+EHL
Sbjct: 541 LKHFHPEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LID+Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIDKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|324984221|gb|ADY68844.1| sucrose synthase [Gossypium barbadense] | Back alignment and taxonomy information |
|---|
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/750 (85%), Positives = 670/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA+R +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MADRVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLANGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAER LEMIQLLL LLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAERVLEMIQLLLGLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT++S
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FHPEIE+LLYS VEN+EHL
Sbjct: 541 LKHFHPEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRAKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LID+Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIDKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium barbadense Species: Gossypium barbadense Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104479|gb|AEN71061.1| sucrose synthase Sus1 [Gossypium schwendimanii] | Back alignment and taxonomy information |
|---|
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/750 (84%), Positives = 669/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MANPVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L +GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLADGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTA+R LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG
Sbjct: 241 GDTAQRVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT+YS
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FH EIE+LLYS VEN+EHL
Sbjct: 541 LKHFHTEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LI++Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIEKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium schwendimanii Species: Gossypium schwendimanii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104513|gb|AEN71078.1| sucrose synthase Sus1 [Gossypium klotzschianum] | Back alignment and taxonomy information |
|---|
Score = 1307 bits (3382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/750 (84%), Positives = 669/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MANPVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L +GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLADGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTA+R LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAQRVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT+YS
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FH EIE+LLYS VEN+EHL
Sbjct: 541 LKHFHTEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LI++Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LANLVVVGGDRRKESKDLEEKAEMKKMFELIEKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium klotzschianum Species: Gossypium klotzschianum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104515|gb|AEN71079.1| sucrose synthase Sus1 [Gossypium aridum] | Back alignment and taxonomy information |
|---|
Score = 1306 bits (3381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/750 (84%), Positives = 670/750 (89%), Gaps = 50/750 (6%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA +TRVHSLRERLDETL AHRNEILALLSRIEGKGKGILQ+HQ+I EFE+I EENRK
Sbjct: 1 MANPVITRVHSLRERLDETLLAHRNEILALLSRIEGKGKGILQHHQIILEFEAIPEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
L +GAF EVL+A+QEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEEL VAEYLHFKE
Sbjct: 61 KLADGAFFEVLKASQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELTVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFN+SFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNSSFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLN+LQHVLRKAEEYL+T+ PETP +E RFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNALQHVLRKAEEYLSTLPPETPCAEFEHRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTA+R LEMIQLLLDLLEAPDPCTLE FLGRIPMVFNVVILTPHGYFAQD+VLGYPDTG
Sbjct: 241 GDTAQRVLEMIQLLLDLLEAPDPCTLEKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EMLLRIKQQGL+ITP+ILIITRLLPDAVGTTCGQRLEKVYGT+YS
Sbjct: 301 GQVVYILDQVRALENEMLLRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVYGTEYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA EI+KELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHEISKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWK L+DKYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLEDKYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL-------------------------------------- 562
LK FH EIE+LLYS VEN+EHL
Sbjct: 541 LKHFHTEIEDLLYSKVENEEHLCVLNDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 600
Query: 563 ------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610
KESKDLEE+AEMKKM+ LI++Y LNGQFRWISSQMNR+RNGELYRYIC
Sbjct: 601 LVNLVVVGGDRRKESKDLEEKAEMKKMFELIEKYNLNGQFRWISSQMNRIRNGELYRYIC 660
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG++IDPYHG+QAA+
Sbjct: 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAD 720
Query: 671 ILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
ILVDFFEKCK DPS+WDKIS GGLKRIEEK
Sbjct: 721 ILVDFFEKCKKDPSHWDKISQGGLKRIEEK 750
|
Source: Gossypium aridum Species: Gossypium aridum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 700 | ||||||
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.852 | 0.738 | 0.782 | 0.0 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.852 | 0.738 | 0.767 | 1.50000009901e-317 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.807 | 0.692 | 0.727 | 7e-290 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.844 | 0.730 | 0.655 | 1.7e-266 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.84 | 0.728 | 0.633 | 1.1e-258 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.854 | 0.634 | 0.515 | 7.4e-211 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.837 | 0.700 | 0.487 | 3.6e-198 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.191 | 0.127 | 0.35 | 2.1e-21 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.161 | 0.106 | 0.355 | 2.9e-18 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.19 | 0.127 | 0.354 | 5.3e-18 |
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2426 (859.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 470/601 (78%), Positives = 518/601 (86%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERLD TL A +NE+ ALLSR+E KGKGILQ+HQ+IAEFE++ E +K
Sbjct: 4 AERVITRVHSQRERLDATLVAQKNEVFALLSRVEAKGKGILQHHQIIAEFEAMPLETQKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEE 121
L GAF E LR+ QEAIVLPP+VALAVRPRPGVWEY+RVN+H YL FKEE
Sbjct: 64 LKGGAFFEFLRSAQEAIVLPPFVALAVRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNA+FPRPTL+K IG+GVEFLNRHLSAKLFHDKES+HPLL+F
Sbjct: 124 LVDGIKNGNFTLELDFEPFNAAFPRPTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GK +MLN+RIQNLN+LQH LRKAEEYL + PET +SE +FQEIGLERGWG
Sbjct: 184 LRLHSHEGKTLMLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWG 243
Query: 242 DTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
DTAER L MI+ EAPDPCTLE FLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DTAERVLNMIRLLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+ITP+ILIITRLLPDA GTTCGQRLEKVYG++Y D
Sbjct: 304 QVVYILDQVRALETEMLQRIKQQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLET+TEDVA EI+KELQGKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LD+KYHFSCQFTADLIAMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSKDTVGQYESH +FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF YTEEKRRL
Sbjct: 484 QEIAGSKDTVGQYESHRSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISSQMNRV 600
+FH EIEELLYSDVEN+EHL KD +++ + M L D+ K L+G W R+
Sbjct: 544 TAFHLEIEELLYSDVENEEHLCVLKD-KKKPIIFTMARL-DRVKNLSGLVEWYGKN-TRL 600
Query: 601 R 601
R
Sbjct: 601 R 601
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2413 (854.5 bits), Expect = 1.5e-317, Sum P(2) = 1.5e-317
Identities = 461/601 (76%), Positives = 517/601 (86%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEE 121
L G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+H +LHFKEE
Sbjct: 64 LEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+F
Sbjct: 124 LVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GKN+ML+++IQNLN+LQH LRKAEEYL + ET + E +F+EIGLERGWG
Sbjct: 184 LRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG 243
Query: 242 DTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
D AER L+MI+ EAPDPCTLETFLGR+PMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+I P+ILI+TRLLPDAVGTTCG+RLE+VY ++Y D
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLETYTED AVE++KEL GKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTAD+ AMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSK+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL
Sbjct: 484 QEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISSQMNRV 600
FH EIEELLYSDVENKEHL KD +++ + M L D+ K L+G W R+
Sbjct: 544 TKFHSEIEELLYSDVENKEHLCVLKD-KKKPILFTMARL-DRVKNLSGLVEWYGKN-TRL 600
Query: 601 R 601
R
Sbjct: 601 R 601
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2201 (779.8 bits), Expect = 7.0e-290, Sum P(2) = 7.0e-290
Identities = 412/566 (72%), Positives = 483/566 (85%)
Query: 3 ERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFES-ISEENRKH 61
+R L+R+HS+RER+ ++LSAH NE++A+ +R+ GKG+LQ HQ+IAE+ + ISE +R+
Sbjct: 7 DRVLSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAISEADREK 66
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEE 121
L +GAF +VLR+ QE IV+ PWVALA+RPRPGVWEY+RVNV YL FKE+
Sbjct: 67 LKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEYLQFKEQ 126
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LV+ G+N NFVLELDFEPFNASFPRP+LSKSIGNGV+FLNRHLS+KLFHDKESM+PLL F
Sbjct: 127 LVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNF 186
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR H +KG MMLNDRI++L++LQ LRKAEE+L+ + +TP+SE RFQE+GLE+GWG
Sbjct: 187 LRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWG 246
Query: 242 DTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
D A+R+ E I EAPDP TLE FLG IPMVFNVVI++PHGYFAQ +VLGYPDTGG
Sbjct: 247 DCAKRSQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVIMSPHGYFAQANVLGYPDTGG 306
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRA+E+EMLLRIKQQGL+ITP+ILI+TRLLPDA GTTCGQRLEKV GT+++
Sbjct: 307 QVVYILDQVRAMENEMLLRIKQQGLNITPRILIVTRLLPDATGTTCGQRLEKVLGTEHTH 366
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTE G+VRKWISRFEVWPYLET+T+DVA EIA ELQ PDLIIGNYSDGN+VA
Sbjct: 367 ILRVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVAC 426
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHK+GVT CTIAHALEKTKYP+SD+YWK +D YHFSCQFT DLIAMNH DFIITSTF
Sbjct: 427 LLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTF 486
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAG+KDTVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGADMSIYFPY+E ++RL
Sbjct: 487 QEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRL 546
Query: 542 KSFHPEIEELLYSDVENKEHLKESKD 567
S HPEIEELLYS+V+N EH KD
Sbjct: 547 TSLHPEIEELLYSEVDNNEHKFMLKD 572
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2051 (727.0 bits), Expect = 1.7e-266, Sum P(2) = 1.7e-266
Identities = 394/601 (65%), Positives = 475/601 (79%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESI--SEEN 58
MA LTRV S R+R+ +TLSAHRNE++ALLSR +GKGILQ H LI E ES+ +E
Sbjct: 1 MANPKLTRVLSTRDRVQDTLSAHRNELVALLSRYVDQGKGILQPHNLIDELESVIGDDET 60
Query: 59 RKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHF 118
+K L++G FGE+L++ EAIV+PP+VALAVRPRPGVWEY+RVNV YL F
Sbjct: 61 KKSLSDGPFGEILKSAMEAIVVPPFVALAVRPRPGVWEYVRVNVFELSVEQLTVSEYLRF 120
Query: 119 KEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPL 178
KEELVDG ++ F LELDFEPFNA+ PRP+ S SIGNGV+FLNRHLS+ +F +K+ + PL
Sbjct: 121 KEELVDGPNSDPFCLELDFEPFNANVPRPSRSSSIGNGVQFLNRHLSSVMFRNKDCLEPL 180
Query: 179 LEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238
L+FLRVH +KG +MLNDRIQ+++ LQ L KAE++++ + ETPFSE Q +G E+
Sbjct: 181 LDFLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEK 240
Query: 239 GWGDTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPD 298
GWGDTA R LEM+ +APDP +LE FLG +PMVFNVVIL+PHGYF Q +VLG PD
Sbjct: 241 GWGDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358
TGGQVVYILDQVRALE EMLLRIK+QGLDI+P ILI+TRL+PDA GTTC QRLE+V GT+
Sbjct: 301 TGGQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTE 360
Query: 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI 418
++ ILRVPFR+EKG++RKWISRF+VWPYLE Y +D A EI ELQG PD IIGNYSDGN+
Sbjct: 361 HTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNL 420
Query: 419 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478
VASL+AH++GVTQCTIAHALEKTKYPDSDIYWK+ D+KYHFSCQFTADLIAMN+ DFIIT
Sbjct: 421 VASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIIT 480
Query: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538
ST+QEIAG+K+TVGQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM+IYFPY+EE
Sbjct: 481 STYQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEET 540
Query: 539 RRLKSFHPEIEELLYSDVENKEHLKESKD-----LEEQAEMKKMYS---LIDQYKLNGQF 590
RRL + H IEE+LYS + EH+ D L A + K+ + L++ Y N +
Sbjct: 541 RRLTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKL 600
Query: 591 R 591
R
Sbjct: 601 R 601
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1974 (699.9 bits), Expect = 1.1e-258, Sum P(2) = 1.1e-258
Identities = 379/598 (63%), Positives = 473/598 (79%)
Query: 8 RVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEF-ESISEENR-KHLTEG 65
R ++RE + + +SA RNE+L+L SR +GKGILQ+HQLI EF +++ + + L +
Sbjct: 5 RFETMREWVYDAISAQRNELLSLFSRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKS 64
Query: 66 AFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDG 125
F +VL++ +EAIVLPP+VALA+RPRPGV EY+RVNV+ YL FKEELV+G
Sbjct: 65 PFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNG 124
Query: 126 GSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 185
+NG+++LELDFEPFNA+ PRPT S SIGNGV+FLNRHLS+ +F +KESM PLLEFLR H
Sbjct: 125 HANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTH 184
Query: 186 CHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAE 245
H G+ MMLNDRIQN+ LQ L +AEE+L+ + TP+SE Q +G ERGWGDTA+
Sbjct: 185 KHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQ 244
Query: 246 RALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVY 305
+ EM+ +APDP LETFLGRIPMVFNVVIL+PHGYF Q +VLG PDTGGQVVY
Sbjct: 245 KVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVY 304
Query: 306 ILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRV 365
ILDQVRALE+EMLLRI++QGL++ P+ILI+TRLLP+A GTTC QRLE+V GT+++ ILR+
Sbjct: 305 ILDQVRALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRI 364
Query: 366 PFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH 425
PFRTEKG++RKWISRF+VWPYLET+ ED + EI+ ELQG P+LIIGNYSDGN+VASLLA
Sbjct: 365 PFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLAS 424
Query: 426 KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485
KLGV QC IAHALEKTKYP+SDIYW+N +DKYHFS QFTADLIAMN+ DFIITST+QEIA
Sbjct: 425 KLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIA 484
Query: 486 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH 545
GSK+ VGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM+IYFPY++++RRL + H
Sbjct: 485 GSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALH 544
Query: 546 PEIEELLYSDVENKEHL----KESK----DLEEQAEMKKMYSLIDQYKLNGQFRWISS 595
IEELL+S +N EH+ +SK + +K + L++ Y N + R +++
Sbjct: 545 ESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELAN 602
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1565 (556.0 bits), Expect = 7.4e-211, Sum P(2) = 7.4e-211
Identities = 311/603 (51%), Positives = 400/603 (66%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
++ L + S+ E++ + L R + + G GK +++ L+ E E E++R+
Sbjct: 5 SQAMLQKSDSIAEKMPDALKQSRYHMKRCFASFVGGGKKLMKREHLMNEIEKCIEDSRER 64
Query: 62 --LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFK 119
+ EG FG +L TQEA V+PP+VALA RP PG WEY++VN YL K
Sbjct: 65 SKILEGLFGYILTCTQEAAVVPPFVALAARPNPGFWEYVKVNSGDLTVDEITATDYLKLK 124
Query: 120 EELVDGG-SNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPL 178
E + D S LE+DF + + PR +LS SIG G +++++ +S+KL + + PL
Sbjct: 125 ESVFDESWSKDENALEIDFGAIDFTSPRLSLSSSIGKGADYISKFISSKLGGKSDKLEPL 184
Query: 179 LEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238
L +L H G+N+M+ND + + LQ L A ++T TP+ A R +E+G E+
Sbjct: 185 LNYLLRLNHHGENLMINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEK 244
Query: 239 GWGDTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPD 298
GWGDTAER E + EAPD L+ R+P VFNVVI + HGYF Q DVLG PD
Sbjct: 245 GWGDTAERVKETMIILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPD 304
Query: 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358
TGGQVVYILDQVRALE+E+L+RI QQGL PQIL++TRL+P+A GT C Q LE + GTK
Sbjct: 305 TGGQVVYILDQVRALEEELLIRINQQGLGFKPQILVVTRLIPEARGTKCDQELEAIEGTK 364
Query: 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI 418
+S ILRVPF T KGV+R+W+SRF+++PYLE +T+D +I + L KPDLIIGNY+DGN+
Sbjct: 365 HSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNL 424
Query: 419 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478
VASL+A KLGVTQ TIAHALEKTKY DSD WK LD KYHFSCQFTADLIAMN TDFIIT
Sbjct: 425 VASLMATKLGVTQGTIAHALEKTKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIIT 484
Query: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538
ST+QEIAGSKD GQYESHTAFT+PGL RVV GIDVFDPKFNI +PGAD S+YFPYTE+
Sbjct: 485 STYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKD 544
Query: 539 RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 598
+R FHP I+ELLY++ +N EH+ D E+ + M L + G W
Sbjct: 545 KRFTKFHPSIQELLYNEKDNAEHMGYLADREKPI-IFSMARLDTVKNITGLVEWYGKD-K 602
Query: 599 RVR 601
R+R
Sbjct: 603 RLR 605
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1463 (520.1 bits), Expect = 3.6e-198, Sum P(2) = 3.6e-198
Identities = 290/595 (48%), Positives = 396/595 (66%)
Query: 11 SLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEE--NRKHLTEGAFG 68
SL + E + +R I L + G+ +++ ++L+ E E + + R+ + EG G
Sbjct: 7 SLGNGIPEAMGQNRGNIKRCLEKYIENGRRVMKLNELMDEMEIVINDVTQRRRVMEGDLG 66
Query: 69 EVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGG-S 127
++L TQ A+V+PP VA AVR PG W+Y++VN YL KE L D +
Sbjct: 67 KILCFTQ-AVVIPPNVAFAVRGTPGNWQYVKVNSSNLSVEALSSTQYLKLKEFLFDENWA 125
Query: 128 NGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCH 187
N LE+DF + + P +LS SIGNG+ F++ L +L + +S L+++L H
Sbjct: 126 NDENALEVDFGALDFTLPWLSLSSSIGNGLSFVSSKLGGRLNDNPQS---LVDYLLSLEH 182
Query: 188 KGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERA 247
+G+ +M+N+ + L+ L A+ +L+ + +TPF LRF+E G E+GWG++A R
Sbjct: 183 QGEKLMMNETLNTARKLEMSLILADVFLSELPKDTPFQAFELRFKECGFEKGWGESAGRV 242
Query: 248 LEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYIL 307
E ++ +APDP ++ F R+P +FNVVI + HGYF Q DVLG PDTGGQVVYIL
Sbjct: 243 KETMRILSEILQAPDPQNIDRFFARVPRIFNVVIFSVHGYFGQTDVLGLPDTGGQVVYIL 302
Query: 308 DQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPF 367
DQV+ALEDE+L RI QGL+ PQIL++TRL+PDA T C Q LE ++GTKYS+ILR+PF
Sbjct: 303 DQVKALEDELLQRINSQGLNFKPQILVVTRLIPDAKKTKCNQELEPIFGTKYSNILRIPF 362
Query: 368 RTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL 427
TE G++R+W+SRF+++PYLE +T+D +I L+GKPDLIIGNY+DGN+VASL+A+KL
Sbjct: 363 VTENGILRRWVSRFDIYPYLERFTKDATTKILDILEGKPDLIIGNYTDGNLVASLMANKL 422
Query: 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGS 487
G+TQ TIAHALEKTKY DSDI WK D KYHFS QFTADLI+MN DFII ST+QEIAGS
Sbjct: 423 GITQATIAHALEKTKYEDSDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGS 482
Query: 488 KDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPE 547
K+ GQYESH +FT+PGLYRVV GI+VFDP+FNI +PGAD SIYFP+T + RR F+
Sbjct: 483 KERAGQYESHMSFTVPGLYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTS 542
Query: 548 IEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 602
I+ELLYS EN EH+ D +++ + M L L G W + R+R+
Sbjct: 543 IDELLYSQSENDEHIGYLVD-KKKPIIFSMARLDVVKNLTGLTEWYAKN-KRLRD 595
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 199 (75.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 49/140 (35%), Positives = 71/140 (50%)
Query: 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 617
N++ ++E + + + LIDQY L GQ + + ++YR TKG F+
Sbjct: 543 NRDDIEEMPN-SSSVVLMNVLKLIDQYDLYGQVAY-PKHHKQSEVPDIYRLAAKTKGVFI 600
Query: 618 QPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677
PAL E FGLT++EA GLP AT GGP +I+ +G +DP H +QA + D
Sbjct: 601 NPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDP-HDQQA---ISDALL 656
Query: 678 KCKADPSYWDKISLGGLKRI 697
K A+ W + GLK I
Sbjct: 657 KLVANKHLWAECRKNGLKNI 676
|
|
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 172 (65.6 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 42/118 (35%), Positives = 61/118 (51%)
Query: 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 639
LID+Y L G + + ++YR +TKG F+ PAL E FGLT++EA GLP
Sbjct: 545 LIDKYDLYGSVAY-PKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAAAHGLPM 603
Query: 640 FATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697
AT GGP +I +G +DP+ E A L+ K ++ + W + + G K I
Sbjct: 604 VATKNGGPVDIHRALHNGLLVDPHDQEAIANALL----KLVSEKNLWHECRINGWKNI 657
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 50/141 (35%), Positives = 67/141 (47%)
Query: 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS-QMNRVRNGELYRYICDTKGAF 616
N+ + E + + LID+Y L GQ Q + V E+YR TKG F
Sbjct: 518 NRNDIDELSSTNSSV-LLSILKLIDKYDLYGQVAMPKHHQQSDVP--EIYRLAAKTKGVF 574
Query: 617 VQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676
+ PA E FGLT++EA GLPT AT GGP +I +G +DP H +QA + D
Sbjct: 575 INPAFIEPFGLTLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDP-HDQQA---IADAL 630
Query: 677 EKCKADPSYWDKISLGGLKRI 697
K +D W + GL I
Sbjct: 631 LKLVSDRQLWGRCRQNGLNNI 651
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.6657 | 0.9157 | 0.8368 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7040 | 0.9857 | 0.8614 | N/A | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.8093 | 1.0 | 0.8695 | N/A | no |
| Q43009 | SUS3_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7066 | 0.9985 | 0.8566 | no | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7261 | 0.99 | 0.8640 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.764 | 1.0 | 0.8695 | N/A | no |
| P49040 | SUS1_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7810 | 0.9985 | 0.8650 | no | no |
| P31924 | SUS1_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7093 | 0.9985 | 0.8566 | no | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.808 | 1.0 | 0.8684 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.6986 | 0.9985 | 0.8566 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7154 | 0.9885 | 0.8574 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.7986 | 1.0 | 0.8695 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7217 | 1.0 | 0.8536 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7097 | 0.9971 | 0.8670 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7626 | 1.0 | 0.8695 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.7922 | 0.9957 | 0.8679 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7433 | 1.0 | 0.8663 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.72 | 0.9985 | 0.8566 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.7613 | 1.0 | 0.8695 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.6550 | 0.9928 | 0.8590 | N/A | no |
| Q9LXL5 | SUS4_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7890 | 0.9985 | 0.8650 | yes | no |
| P30298 | SUS2_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7234 | 0.99 | 0.8576 | yes | no |
| P13708 | SUSY_SOYBN | 2, ., 4, ., 1, ., 1, 3 | 0.8146 | 1.0 | 0.8695 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 700 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 2e-93 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 8e-40 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-19 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-16 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 1e-14 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 9e-12 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-11 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-10 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-10 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 3e-10 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-09 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 2e-09 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 4e-09 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 1e-08 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-08 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 6e-08 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 9e-08 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 9e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 2e-07 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 3e-07 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 4e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 4e-07 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 4e-07 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 7e-07 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 1e-06 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 2e-05 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 4e-05 | |
| PRK09922 | 359 | PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo | 6e-05 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 1e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 3e-04 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 0.001 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 0.002 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.002 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.002 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 0.002 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 0.003 | |
| smart00893 | 185 | smart00893, ETF, Electron transfer flavoprotein do | 0.004 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1477 bits (3827), Expect = 0.0
Identities = 550/753 (73%), Positives = 612/753 (81%), Gaps = 53/753 (7%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESI--SEEN 58
A LTR HS+RER+ + LS HRNE+ ALLSR +GKGILQ HQLI E E++ +E
Sbjct: 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEE 61
Query: 59 RKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHF 118
RK L +G FG++LR+TQEAIVLPP+VALAVRPRPGVWEY+RVNV L VEEL V+EYL F
Sbjct: 62 RKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKF 121
Query: 119 KEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPL 178
KEELVDG N NFVLELDFEPFNASFPRPTLS SIGNGV+FLNRHLS+KLF DKES+ PL
Sbjct: 122 KEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPL 181
Query: 179 LEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238
L+FLR H HKG+ +MLNDRIQ L+ LQ LRKAEEYL+ + +TP+SE RFQE+GLE+
Sbjct: 182 LDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241
Query: 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPD 298
GWGDTAER LE I LLLDLL+APDP TLE FLGRIPMVFNVVI +PHGYF Q +VLG PD
Sbjct: 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPD 301
Query: 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358
TGGQVVYILDQVRALE+EMLLRIKQQGLDI PQILI+TRL+PDA GTTC QRLEKV GT+
Sbjct: 302 TGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTE 361
Query: 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI 418
+S ILRVPFRTEKG++RKWISRF+VWPYLET+ ED A EI ELQGKPDLIIGNYSDGN+
Sbjct: 362 HSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNL 421
Query: 419 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478
VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWK DDKYHFSCQFTADLIAMNH DFIIT
Sbjct: 422 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481
Query: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538
ST+QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTE++
Sbjct: 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541
Query: 539 RRLKSFHPEIEELLYSDVENKEHL------------------------------------ 562
+RL S HP IEELLYS +N EH+
Sbjct: 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL 601
Query: 563 ---------------KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607
+SKD EE AE+KKM+SLI++Y L GQFRWI++Q NRVRNGELYR
Sbjct: 602 RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYR 661
Query: 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 667
YI DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC+GGPAEIIV+G SG+HIDPYHG++
Sbjct: 662 YIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721
Query: 668 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
AA + DFFEKCK DPSYW+KIS GL+RI E
Sbjct: 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYEC 754
|
Length = 815 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 1247 bits (3228), Expect = 0.0
Identities = 498/731 (68%), Positives = 576/731 (78%), Gaps = 54/731 (7%)
Query: 24 RNEILALLSRIEGKGKGILQNHQLIAEFE-SISEENR-KHLTEGAFGEVLRATQEAIVLP 81
R E+ LLSR +GK L HQL+ EFE S+ ++ K L+E G+++ +TQEAIVLP
Sbjct: 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESPLGKLIFSTQEAIVLP 60
Query: 82 PWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFN 141
PWVALAVRPR GVWEY+RVNV L VEEL ++EYL FKE+LV+G +N VLELDFEPFN
Sbjct: 61 PWVALAVRPRIGVWEYVRVNVEELSVEELTISEYLDFKEQLVNGHANDPNVLELDFEPFN 120
Query: 142 ASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNL 201
ASFPRP+ SKSIGNGV+FLNRHLS+KLF D ESM PLL FLRVH + G +M+NDRIQ++
Sbjct: 121 ASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRIQSV 180
Query: 202 NSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAP 261
+ LQ LRKAEE+L+ + P+TP+SE QE+G E GWGDTA+R LE + LL DLLEAP
Sbjct: 181 SHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240
Query: 262 DPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRI 321
DP LE FLGRIPMVFNVVIL+PHGYF Q++VLG PDTGGQVVYILDQVRALE+EML RI
Sbjct: 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRI 300
Query: 322 KQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISR 380
K QGL+ITP+ILI+TRL+PDA GTTC QRLEKVYGT+++ ILRVPFRTE G ++R WISR
Sbjct: 301 KLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISR 360
Query: 381 FEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEK 440
FE+WPYLET+ ED EI ELQGKPDLIIGNYSDGN+VASLLA KLGVTQCTIAHALEK
Sbjct: 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEK 420
Query: 441 TKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAF 500
TKYPDSDIYW+ +DKYHFSCQFTADLIAMN DFIITST+QEIAG+KD+VGQYESH AF
Sbjct: 421 TKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480
Query: 501 TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560
T+PGLYRVVHGIDVFDPKFNIVSPGAD SIYFPY+++++RL + HPEIEELL+S +N E
Sbjct: 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDE 540
Query: 561 HL---------------------------------------------------KESKDLE 569
H KESKD E
Sbjct: 541 HYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDRE 600
Query: 570 EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629
EQAE++KM++LIDQY+L+GQ RWI +Q+NRVRNGELYRYI DTKG FVQPALYEAFGLTV
Sbjct: 601 EQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTV 660
Query: 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689
+EAMTCGLPTFAT GGP EII +G SG+HIDPYHGE+AAE +VDFFEKC DPSYW KI
Sbjct: 661 LEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720
Query: 690 SLGGLKRIEEK 700
S GGL+RI EK
Sbjct: 721 SQGGLQRIYEK 731
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 1077 bits (2787), Expect = 0.0
Identities = 459/550 (83%), Positives = 507/550 (92%), Gaps = 2/550 (0%)
Query: 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTE-- 64
TRVHSLRERLD+TLSAHRNE+LALLSRI +GKGILQ HQLIAE+E+I E+R L +
Sbjct: 1 TRVHSLRERLDDTLSAHRNELLALLSRIVAQGKGILQPHQLIAEYEAILGEDRAKLDDKN 60
Query: 65 GAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVD 124
GAFGEV+++ QEAIVLPPWVALAVRPRPGVWEY+RVNVH LVVEEL V EYL FKEELVD
Sbjct: 61 GAFGEVIKSAQEAIVLPPWVALAVRPRPGVWEYVRVNVHELVVEELSVPEYLQFKEELVD 120
Query: 125 GGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRV 184
G SN NFVLELDFEPFNASFPRPTLSKSIGNGV+FLNRHLS+K+FHDK+S+HPLLEFLR+
Sbjct: 121 GSSNDNFVLELDFEPFNASFPRPTLSKSIGNGVQFLNRHLSSKMFHDKDSLHPLLEFLRL 180
Query: 185 HCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244
H +KGK +MLNDRIQN+++LQ LRKAE+YL+T+ P+TP+SE +FQEIG ERGWGDTA
Sbjct: 181 HTYKGKTLMLNDRIQNISALQSALRKAEDYLSTLPPDTPYSEFEHKFQEIGFERGWGDTA 240
Query: 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVV 304
ER LEM+ LLLDLLEAPDP TLETFLGRIPMVFNVVIL+PHGYFAQ +VLGYPDTGGQVV
Sbjct: 241 ERVLEMMHLLLDLLEAPDPSTLETFLGRIPMVFNVVILSPHGYFAQANVLGYPDTGGQVV 300
Query: 305 YILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILR 364
YILDQVRALE EML+RIKQQGLDITP+ILI+TRLLPDAVGTTC QRLEKV+GT+++ ILR
Sbjct: 301 YILDQVRALESEMLVRIKQQGLDITPRILIVTRLLPDAVGTTCNQRLEKVFGTEHTHILR 360
Query: 365 VPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLA 424
VPFRTEKG++RKWISRFEVWPYLET+ EDVA EIA ELQ KPDLIIGNYSDGN+VASLLA
Sbjct: 361 VPFRTEKGILRKWISRFEVWPYLETFAEDVASEIAAELQAKPDLIIGNYSDGNLVASLLA 420
Query: 425 HKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484
HKLGVTQCTIAHALEKTKYPDSDIYWK + KYHFSCQFTADLIAMNH DFIITSTFQEI
Sbjct: 421 HKLGVTQCTIAHALEKTKYPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEI 480
Query: 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSF 544
AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM+IYFPYTE+++RL +
Sbjct: 481 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYTEKEKRLTAL 540
Query: 545 HPEIEELLYS 554
HPEIEELLYS
Sbjct: 541 HPEIEELLYS 550
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 2e-93
Identities = 117/453 (25%), Positives = 179/453 (39%), Gaps = 99/453 (21%)
Query: 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 337
+ +++ HG G DTGGQ VY+L+ RAL + ++ I TR
Sbjct: 1 RIALISLHGSPLAQP--GGADTGGQNVYVLELARAL------------ARLGHEVDIFTR 46
Query: 338 LLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVE 397
+ DA+ V ++RVP + + ++ E+WPYL+ + +D+
Sbjct: 47 RIDDALPPI-------VELAPGVRVVRVPAGPAEYLPKE-----ELWPYLDEFADDLLRF 94
Query: 398 IAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457
+ +E G+PDLI +Y D +VA LLA +LG+ H+L K Y
Sbjct: 95 LRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAAD-----TY 148
Query: 458 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517
+ + A+ + D +I ST QE G Y
Sbjct: 149 EPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRR-------------------- 188
Query: 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEE--LLYSD--VENK------------EH 561
+V PG D+ + PY + R + ++ +L K
Sbjct: 189 -IRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247
Query: 562 LKE---------------SKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606
L+E + D EE E+ + +ID+ G +++R LY
Sbjct: 248 LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPG-------RVSREDLPALY 300
Query: 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666
R FV PALYE FGLT +EAM CGLP AT GGP +I+V+G +G +DP E
Sbjct: 301 RA----ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPE 356
Query: 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
A L DP+ ++S GL+R
Sbjct: 357 ALAAALRRLL----TDPALRRRLSRAGLRRARA 385
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 8e-40
Identities = 130/462 (28%), Positives = 205/462 (44%), Gaps = 90/462 (19%)
Query: 279 VVILTPHGYFAQDDV-LGY-PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIIT 336
+++L+ HG D+ LG DTGGQ Y+L+ RAL + Q+ ++T
Sbjct: 3 LLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVE----------QVDLVT 52
Query: 337 RLLPDA-VGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 395
RL+ DA V Q +E++ + I+R+PF R+++ + +WPYL+ D
Sbjct: 53 RLIKDAKVSPDYAQPIERI-APG-ARIVRLPFGP-----RRYLRKELLWPYLDELA-DNL 104
Query: 396 VEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKN 452
++ ++ PDLI +Y+D V + L+ LGV H+L + K + + +
Sbjct: 105 LQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQ 164
Query: 453 LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512
++ +Y+ S + A+ + H +ITST QEI QY LY
Sbjct: 165 IEKQYNISRRIEAEEETLAHASLVITSTHQEI------EEQY---------ALY------ 203
Query: 513 DVFDP-KFNIVSPGADMSIYFPY--TEEKRR----LKSF--HPE---------------I 548
D + P + ++ PG D+S ++P +EE L F PE I
Sbjct: 204 DSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNI 263
Query: 549 EELLYSDVENKEHLKES-------------KDLEEQAE--MKKMYSLIDQYKLNGQFRWI 593
L+ + + L+E + +E Q ++K+ LID+Y L G+
Sbjct: 264 PSLVEAYGRS-PKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVA-Y 321
Query: 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 653
ELYR ++G FV PAL E FGLT++EA CGLP AT GGP +II N
Sbjct: 322 PKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN 381
Query: 654 GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695
++G +D E A L E +D S W S G++
Sbjct: 382 CRNGLLVDVLDLEAIASAL----EDALSDSSQWQLWSRNGIE 419
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 5e-19
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 570 EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629
+ E KK+ L + L ++ + ELYR I D FV P+ YE FGL +
Sbjct: 41 DGEEEKKLKKLALKLGLEDNVIFVG-FVPDEDLIELYR-IAD---LFVLPSRYEGFGLVL 95
Query: 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689
+EAM G+P AT GGPAEI+ +G++G +DP E AE + EK D +++
Sbjct: 96 LEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAI----EKLLKDEELRERL 151
Query: 690 SLGGLKR 696
KR
Sbjct: 152 GENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-16
Identities = 80/424 (18%), Positives = 138/424 (32%), Gaps = 93/424 (21%)
Query: 296 YPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355
P GG ++L+ RAL +G ++T ++T
Sbjct: 10 PPSVGGAERHVLELARAL--------AARGHEVT----VLTPGDGGLP------------ 45
Query: 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD 415
G+V L + + D++ +
Sbjct: 46 ----------DEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWL 95
Query: 416 GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDF 475
+ A+L A LG+ H LE L K + + A+ D
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLE----FGRPGNELGLLLKLARALER----RALRRADR 147
Query: 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT 535
II V + T L L V K ++ G D + P
Sbjct: 148 IIA------------VSEA---TREELRELGGV------PPEKITVIPNGVDTERFRPAP 186
Query: 536 EEKRRLKSFHPEIEELLY--SDVENK--EHL--------KESKDLE-----EQAEMKKMY 578
RR + +L+ V K + L KE D+ + +++
Sbjct: 187 RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELE 246
Query: 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTCG 636
+L + L + ++ V + +L D FV P+LYE FGL ++EAM G
Sbjct: 247 ALAAELGLGDRVTFLG----FVPDEDLPALYAAAD---VFVLPSLYEGFGLVLLEAMAAG 299
Query: 637 LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696
LP A+ GG E++ +G++G + P E AE ++ + DP ++ +R
Sbjct: 300 LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLD----DPELRRRLGEAARER 355
Query: 697 IEEK 700
+ E+
Sbjct: 356 VAER 359
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-14
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 639
LID+Y L GQ + + ++YR TKG F+ PA E FGLT++EA GLP
Sbjct: 540 LIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPM 598
Query: 640 FATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697
AT GGP +I +G +DP+ + A+ L+ K AD W + GLK I
Sbjct: 599 VATKNGGPVDIHRVLDNGLLVDPHDQQAIADALL----KLVADKQLWAECRQNGLKNI 652
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 9e-12
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Query: 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRN-GELYRYICDTKGA-FVQPALYEAFGLTVV 630
E + + +LI + L + + +N E Y K + FV + +E F + ++
Sbjct: 220 EREALEALIKELGLEDRVIL----LGFTKNIEEYYA-----KASIFVLTSRFEGFPMVLL 270
Query: 631 EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689
EAM GLP + C GP+EII +G +G + E AE L+ E D ++
Sbjct: 271 EAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLME----DEELRKRM 326
Query: 690 SLGGLKRIEE 699
+ E
Sbjct: 327 GANARESAER 336
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 66.9 bits (162), Expect = 1e-11
Identities = 57/334 (17%), Positives = 109/334 (32%), Gaps = 32/334 (9%)
Query: 374 VRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD---GNIVASLLAHKLGVT 430
V + S + + + + + D+I + G ++A LL LG+
Sbjct: 52 VLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIP 111
Query: 431 QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490
H L + + D +I S
Sbjct: 112 LVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLK---KALRLLADRVIAV-------SPAL 161
Query: 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMSIYFPYT---EEKRRLKSFHP 546
E+ + + +GID + Y + ++ L
Sbjct: 162 KELLEAL--GVPNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIE 219
Query: 547 EIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606
+L + K + + ++ L + L +++ V + EL
Sbjct: 220 AAAKLKKRGPDIKLVIVGDGPERRE----ELEKLAKKLGLEDNVKFL----GYVPDEELA 271
Query: 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666
+ FV P+L E FGL ++EAM G P A+ GG E++ +G++G + P E
Sbjct: 272 ELLASAD-VFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVE 330
Query: 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+ A+ L E DP +++ +R+EE+
Sbjct: 331 ELADALEQLLE----DPELREELGEAARERVEEE 360
|
Length = 381 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 1e-10
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674
FV P+ E FGL V+EAM GLP A GGPA+I+ +G++G ++P E A L
Sbjct: 269 VFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA 328
Query: 675 FFE 677
Sbjct: 329 LLA 331
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 1e-10
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 660
EL + FV P+L E FGL V+EAM CGLP AT GGP EI+ +G +G +
Sbjct: 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-10
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 604 ELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID 661
E+ Y D FV P+L E FGL ++EAM CGLP AT GG EII +G++G +
Sbjct: 271 EVPAYYAAAD---VFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVP 327
Query: 662 PYHGEQAAEILVDFFEK 678
P E AE ++
Sbjct: 328 PGDPEALAEAILRLLAD 344
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTCGL 637
L + L + ++ Q N Y Y+ D FV + YE F ++EAM G
Sbjct: 238 LAKELGLADRVHFLGFQSNP------YPYLKAAD---LFVLSSRYEGFPNVLLEAMALGT 288
Query: 638 PTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP 683
P AT C GP EI+ +G++G + P E A DP
Sbjct: 289 PVVATDC-PGPREILEDGENGL-LVPVGDEAALAAAALALLDLLLDP 333
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 2e-09
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 599 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658
RV + EL + AF+ PA E FG+ VEAM G P A KGG E +++G +G
Sbjct: 249 RVSDEELRDLYARAR-AFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGI 306
Query: 659 HIDPYHGEQAAEIL---VDFFEKCKA 681
+ EQ E L V+ FEK +
Sbjct: 307 LFE----EQTVESLAAAVERFEKNED 328
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 632
E+++ +L+D+ + WI+ + + EL + FV P++YE G+ +EA
Sbjct: 247 EVRQAVALLDRNR--TGIIWINKMLPKEELVELLSN-AE---VFVCPSIYEPLGIVNLEA 300
Query: 633 MTCGLPTFATCKGGPAEIIVNGKSGY--HIDPYHGEQAAEILVDFFEKCKADPSYWDKIS 690
M CG P A+ GG E++V+G++G+ D + L ADP K+
Sbjct: 301 MACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMG 360
Query: 691 LGGLKRIEE 699
+ G KR EE
Sbjct: 361 IAGRKRAEE 369
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 1e-08
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 614 GAFVQPALYEAFGLTVVEAMTCGLP--TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671
+ + E FGL+++EA++ GLP ++ GP+EII +G++GY + E AE
Sbjct: 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDV-NYGPSEIIEDGENGYLVPKGDIEALAEA 338
Query: 672 LVDFFEKCKADPSYWDKIS 690
+++ DP K S
Sbjct: 339 IIELLN----DPKLLQKFS 353
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675
F+ P+ E+FGL +EAM CG+P A+ GG E++ +G++G+ +D E AE +
Sbjct: 274 FLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSL 333
Query: 676 FEKCKADPSYWDKISLGGLKRIEE 699
E D W + S R E
Sbjct: 334 LE----DDELWQEFSRAARNRAAE 353
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 6e-08
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLP--TFATCKGGPAEIIVNGKSGYHIDPY 663
FV P+L E F T +EA+ CG P F GG +I+ +G +GY P
Sbjct: 268 FVVPSLQENFPNTAIEALACGTPVVAFDV--GGIPDIVDHGVTGYLAKPG 315
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 9e-08
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 29/148 (19%)
Query: 557 ENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616
EN E+L+E L+ AE + L Q ++ S + + L
Sbjct: 260 ENVEYLEE---LQRLAE--------ELLLLEDQVIFLPSISDSQKE-LLLS-SARA---- 302
Query: 617 VQPALY----EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672
LY E FG+ +EAM G P A GGP E +V+G++G+ +P E+ AE +
Sbjct: 303 ---LLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAM 358
Query: 673 VDFFEKCKADPSYWDKISLGGLKRIEEK 700
+ DP D++ G KR++EK
Sbjct: 359 LKLAN----DPDLADRMGAAGRKRVKEK 382
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 9e-08
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 539 RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 598
R LK+ P + LL D + + + I++ L G+ ++ + +
Sbjct: 211 RILKAKGPNVRLLLVGDGDEENPAAILE--------------IEKLGLEGRVEFLGFRDD 256
Query: 599 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658
V EL D FV P+ E ++EAM G P AT G E +++G +G+
Sbjct: 257 -VP--ELLA-AAD---VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGF 309
Query: 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+ P E A+ + E DP ++ KR EE+
Sbjct: 310 LVPPGDAEALADAIERLIE----DPELRARMGQAARKRAEEE 347
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 622 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA 681
E F L + EA+ G+P A+ GG AE++ +G +G P E A L E+
Sbjct: 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAAL----ERLID 328
Query: 682 DPSYWDKISLGGLKRI 697
DP +++ G
Sbjct: 329 DPDLLERLRAGIEPPR 344
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA--EIIVNGKSGYHIDPYHGEQAAEIL 672
AFV P+LYE FGL V+EAM CG P A+ + E+ G + + DP E A +
Sbjct: 275 AFVFPSLYEGFGLPVLEAMACGTPVIAS--NISSLPEVA--GDAALYFDPLDPEALAAAI 330
Query: 673 VDFFEKCKADPSYWDKISLGGLKRIE 698
E DP+ +++ GL R +
Sbjct: 331 ERLLE----DPALREELRERGLARAK 352
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 4e-07
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 24/116 (20%)
Query: 567 DLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR----NGELYRYI--CDTKGAFVQPA 620
D +A ++++ I L NRV+ ++ Y D FV +
Sbjct: 227 DGPLRATLERL---IKALGL----------SNRVKLLGLRDDIAAYYNAADL---FVLSS 270
Query: 621 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676
+E FGL V EAM C LP AT GG E++ G SG + E A + +
Sbjct: 271 AWEGFGLVVAEAMACELPVVATDAGGVREVV--GDSGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 4e-07
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 605 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664
Y D FV + E GL ++EAM GLP A G +++ +G++G+ P
Sbjct: 274 DYYKAAD---LFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGD 330
Query: 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
A +L + DP ++S + E+
Sbjct: 331 EALAEALL-----RLLQDPELRRRLSKNAEESAEK 360
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675
FV P+L E T++EAM GLP AT GG E++ +G +G + P A L +
Sbjct: 276 FVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPY 335
Query: 676 FEKCKADPSYWDKISLGGLKRIEEK 700
+DP+ G R E++
Sbjct: 336 V----SDPAARRAHGAAGRARAEQQ 356
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 7e-07
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 623 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
E FGL ++EAM CG P A +G E++ +G +G+ +D E+ A
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSV--EELAA 300
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 1e-06
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675
FV +L E F ++EAM CGLP AT G AE++ G +G+ + P E AE +
Sbjct: 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELV--GDTGFLVPPGDPEALAEAIEAL 329
Query: 676 FEKCKADPSYWDKISLGGLKRIEE 699
ADP+ + +RIEE
Sbjct: 330 L----ADPALRQALGEAARERIEE 349
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 623 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672
EAFG T VEA G P A+ GG E + G++G + P E A+ L
Sbjct: 275 EAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQAL 324
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 623 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682
E+FGL +EAM CG+P A+ GG E++ +G +G+ D E AE + E D
Sbjct: 283 ESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLLE----D 338
Query: 683 PSYWDKISLGGLKRIEEK 700
+ S +R +E+
Sbjct: 339 EELLQRFSAAARERAKER 356
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 4e-05
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 42/215 (19%)
Query: 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357
DTGGQV Y+++ RAL + + + L +T Q+ PD V + G+ E +
Sbjct: 193 DTGGQVKYVVELARALG--SMPGVYRVDL-LTRQVSS-----PD-VDWSYGEPTEMLTPR 243
Query: 358 KYSD------------ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA----VEIAKE 401
+ I+R+PF G K+I + E+WPY+ + D A V ++K
Sbjct: 244 SSENDGDEMGESSGAYIIRIPF----GPRDKYIPKEELWPYIPEFV-DGALSHIVNMSKV 298
Query: 402 L-----QGK---PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPD----SDIY 449
L G P +I G+Y+D A+LL+ L V H+L + K +
Sbjct: 299 LGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMS 358
Query: 450 WKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484
+ ++ Y + A+ ++++ ++ +ITST QEI
Sbjct: 359 KEEINSTYKIMRRIEAEELSLDASEIVITSTRQEI 393
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 615 AFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673
A + + +E F +T++EAM+ G+P ++ C GP +II G +G P + ++ L
Sbjct: 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLN 319
Query: 674 DFFEK 678
Sbjct: 320 KVISG 324
|
Length = 359 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 615 AFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668
F+QP++ E + ++EA G+P AT GG E + +G++G +
Sbjct: 267 IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAAL 326
Query: 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
A L ADP ++ G +R+EE
Sbjct: 327 AAALGRLL----ADPDLRARMGAAGRRRVEE 353
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 576 KMYSLIDQYKLNGQFRWISSQ-MNRVRNGELYRYICDTKGAFVQPAL------YEAFGLT 628
++ +LI + L + + ++ VR EL R D FV P++ E +
Sbjct: 224 ELEALIAELGLEDRVTLLGAKSQEEVR--ELLRA-AD---LFVLPSVTAADGDREGLPVV 277
Query: 629 VVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 688
++EAM GLP +T G E++ +G++G + P E A+ + + DP +
Sbjct: 278 LMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLD----DPELRRE 333
Query: 689 ISLGGLKRIEE 699
+ G R+EE
Sbjct: 334 MGEAGRARVEE 344
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 623 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 660
EAF + VEAM G P A+ KGG E ++ G +GYH+
Sbjct: 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL 325
|
Length = 380 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672
FV P+ E FG+ V EA+ CG P T K E+I G G+ +D AA +
Sbjct: 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEYG-CGWVVDDDVDALAAALR 340
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 617 VQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676
+Q ++ E FGLTV EA+ G P A GG I +G++G+ +D E+AA ++
Sbjct: 278 LQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILYLL 335
Query: 677 EKCKADPSYWDKISLGGLKRIEEK 700
DP K+ + + E
Sbjct: 336 ----RDPELRRKMGANAREHVREN 355
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGYHIDPYHGEQAAEIL 672
FV P+ E G V+EAM G+P A GG +II GK+G+ P + E L
Sbjct: 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKL 394
|
Length = 465 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.002
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 599 RVRNGELYRY--ICDTKGAFVQP--ALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVN 653
R+ + E CD FV P EAFG+ ++EAM G P +T G + + ++
Sbjct: 251 RLDDEEKAALLAACD---VFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLH 307
Query: 654 GKSGYHIDP 662
G +G + P
Sbjct: 308 GVTGLVVPP 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 629 VVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658
++EAM+ G+P AT GG EI+ NG +G
Sbjct: 327 IMEAMSFGIPVIATNVGGTPEIVDNGGNGL 356
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|214890 smart00893, ETF, Electron transfer flavoprotein domain | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 386 YLETYTEDVAVEIAKEL--QGKPDLII-GNYSDGNIVASLLAHKLGVTQCT 433
T E L + KPDL++ G SDG +A LA LGV Q T
Sbjct: 62 LAGYDTLATLAEALAALIKEEKPDLVLAGATSDGKQLAPRLAALLGVPQIT 112
|
Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II). ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs. Length = 185 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 700 | |||
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.98 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.98 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.97 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.97 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.96 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.96 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.96 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.96 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.95 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.91 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.9 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.9 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.89 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.89 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.88 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.86 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.86 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.85 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.85 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.79 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.79 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.73 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.72 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.71 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.69 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.68 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.68 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.67 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.66 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.62 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.6 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.59 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.57 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.52 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.48 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.44 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.42 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.35 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.31 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.28 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.27 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.23 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.18 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.13 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.09 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.02 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.92 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.91 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 98.84 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.79 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.75 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.75 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.69 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.55 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.52 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.48 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.41 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.34 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.31 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.3 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.98 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.92 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.91 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 97.77 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.64 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.5 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.39 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 97.35 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.35 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.34 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.31 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.29 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.07 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.99 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.89 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.86 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.79 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.71 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.55 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.52 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.49 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 96.49 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.47 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.43 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.42 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 96.08 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 95.67 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 95.64 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.0 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 94.99 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 94.95 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 94.3 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.26 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 94.12 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 93.8 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 93.66 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 93.29 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 93.28 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 93.26 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 93.24 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 93.17 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 92.59 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 92.42 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 91.1 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 90.77 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 90.59 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 89.7 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 89.38 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 88.92 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 88.44 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 87.78 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 87.17 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 86.4 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 86.11 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 86.09 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 84.53 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 84.44 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 82.58 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 82.48 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 80.07 |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-174 Score=1491.49 Aligned_cols=699 Identities=76% Similarity=1.209 Sum_probs=666.8
Q ss_pred CcccccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceee
Q 005365 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAI 78 (700)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (700)
|+.++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++. +.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 5668999999999999999999999999999999999999999999999999994 44577899999999999999999
Q ss_pred EcCCeEEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhh
Q 005365 79 VLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVE 158 (700)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (700)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||+|+||||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhHhhhhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCcc
Q 005365 159 FLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238 (700)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (700)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccHHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHH
Q 005365 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (700)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa 318 (700)
||||||+||+|||++|+++|++|||++||+|++||||+|||+|||+||||+|.+++|+||||||.+||++||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHH
Q 005365 319 LRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI 398 (700)
Q Consensus 319 ~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l 398 (700)
++|+++||+|+|+|+|+||.+++..++.|+++.|.+.++++++|+|+|+++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999998
Q ss_pred HHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 399 AKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 399 ~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
.+..+++|||||+|||+++++|.++++++|||+|+|+|++++.++..++.+|+..+..|++++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccC-------------------------
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP------------------------- 533 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g------------------------- 533 (700)
+|.++++++++.++||.+|..|++|++++++|||+++++++++||||+|...|+|
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 9999999999999999999999999999999999998999999999998766653
Q ss_pred -------------------CchhhhchhhHHHHHHHHhhcCCCccEEEEecC-Ch------hhHHHHHHHHHHHHHcCCC
Q 005365 534 -------------------YTEEKRRLKSFHPEIEELLYSDVENKEHLKESK-DL------EEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 534 -------------------~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~G-d~------ee~~~~~~l~~li~~l~L~ 587 (700)
|+.+.||++.+++|+..+....++.+++++|+| ++ ++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 334458999999999988766667888888876 22 2334567889999999999
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHH
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 667 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ea 667 (700)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||++||++|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999998768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 668 AAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 668 LAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|++|.+++++|..||+.|++|+++|++++.+
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e 753 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYE 753 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999888889999999999999999865
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-167 Score=1431.09 Aligned_cols=676 Identities=71% Similarity=1.150 Sum_probs=641.6
Q ss_pred HHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEe
Q 005365 24 RNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVN 101 (700)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (700)
|++|++||+||+++||++||+|||+++|++++ +.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999994 3346689999999999999999999999999999999999999999
Q ss_pred cCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCcchHHHH
Q 005365 102 VHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181 (700)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (700)
++||+||+||++|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCC
Q 005365 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAP 261 (700)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p 261 (700)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCC
Q 005365 262 DPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD 341 (700)
Q Consensus 262 ~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~ 341 (700)
||++||+|++||||+|||+|+|+||||+|.+++|+||+|||.+||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccceeEecCccceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHH
Q 005365 342 AVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (700)
Q Consensus 342 ~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva 420 (700)
..++.|+++.|.+.++++++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 8899999999999999999999999999877 799999999999999999999999998777789999999999999999
Q ss_pred HHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccc
Q 005365 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAF 500 (700)
Q Consensus 421 ~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~ 500 (700)
.++++++|||+|+|+|++.+.++..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||+++..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCCCCcceecCCCCccccccC--------------------------------------------Cch
Q 005365 501 TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP--------------------------------------------YTE 536 (700)
Q Consensus 501 ~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g--------------------------------------------~~~ 536 (700)
++|+++.+.|||+++++|+++||||+|..+|.| |+.
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 999999999999999999999999999665554 334
Q ss_pred hhhchhhHHHHHHHHhhcCCCccEEEEecCCh-------hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 537 EKRRLKSFHPEIEELLYSDVENKEHLKESKDL-------EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~-------ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
+.||++.+++|+..+....++.+++++|++.. ++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 45899999999987654445677888887642 34457789999999999999999999887677788999998
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++++|+||+||++|+||++++||||||+|||||++||++|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87689999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHh
Q 005365 690 SLGGLKRIEE 699 (700)
Q Consensus 690 s~~ar~ra~e 699 (700)
+++|++++.+
T Consensus 721 s~~a~~rV~~ 730 (784)
T TIGR02470 721 SQGGLQRIYE 730 (784)
T ss_pred HHHHHHHHHH
Confidence 9999999865
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-168 Score=1344.27 Aligned_cols=547 Identities=72% Similarity=1.187 Sum_probs=471.5
Q ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhc--ccCCCcHHHHHhhcceeeEcCCeE
Q 005365 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWV 84 (700)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (700)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 699999999999999999999999999999999999999999999999876655 557899999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHhh
Q 005365 85 ALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHL 164 (700)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (700)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccH
Q 005365 165 SAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244 (700)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 244 (700)
|||||+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHC
Q 005365 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ 324 (700)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~ 324 (700)
+||+|||++|+++|++|||++||+|++||||+++||++||||||+|+|++|+||||||++||+|||||||++|..++..+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCC
Q 005365 325 GLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQG 404 (700)
Q Consensus 325 GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~ 404 (700)
|.+|.|+|+|+||.+|+..++.|+++.|++.++++.+|+|+||++.++++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||+||++++++|.++++++|+|+|+|.|++++.||..++.+|+.++.+|||+|++++|.++|+.||+|||+|+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhh
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~ 553 (700)
++.++.+|||+++.+|++|++|+++|||++|+|||++||||+|..+|+|+.+++|++..+++.+++|++
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llf 549 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLF 549 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
|
4.1.13 from EC in the following reaction: |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=474.66 Aligned_cols=396 Identities=24% Similarity=0.428 Sum_probs=316.1
Q ss_pred ceEEEEEccccccccCCc-CCC-CCcCcchhhhHHHHHHHHHHHHHHHHHCC--CceeeccEEEeccCCC-CCCCCCccc
Q 005365 276 VFNVVILTPHGYFAQDDV-LGY-PDTGGQVVYILDQVRALEDEMLLRIKQQG--LDITPQILIITRLLPD-AVGTTCGQR 350 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~-lG~-p~~GG~~vyvld~araL~~eLa~~L~~~G--heV~~~i~VvT~~~p~-~~~~~~~~~ 350 (700)
.|+|++||.||.|.+++. +|+ +|+|||.+||+ +||++|+++| |+|+ |+||...+ ..+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999987776 885 99999999999 5555668898 8999 99998754 344556666
Q ss_pred eeEe------------cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHH-------c----CCCCe
Q 005365 351 LEKV------------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKE-------L----QGKPD 407 (700)
Q Consensus 351 ~e~i------------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~-------~----~~~pD 407 (700)
.|.+ ...++++|+|+|+++... ++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~----~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDK----YIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCCC----CcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5443 344689999999998633 5778999999999999999876541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCC----CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 408 lIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~----~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
|||+|||+++.++..+++.+++|+|+|.|++...++. .+...|..+...|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999998766643 222345566778899999999999999999999999999
Q ss_pred HHhhhhhhcccccc---------------ccccCCCeEEeecCCCCCCCccee---------------------------
Q 005365 484 IAGSKDTVGQYESH---------------TAFTLPGLYRVVHGIDVFDPKFNI--------------------------- 521 (700)
Q Consensus 484 ~~~~k~~~~~y~~~---------------~~~~~p~l~~v~nGId~~~~k~~v--------------------------- 521 (700)
++.+...++.|... .+..+|.+.+|++|+|+ .+|..
T Consensus 393 ~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~--~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l 470 (1050)
T TIGR02468 393 IEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEF--SHIVPHDGDMDGETEGNEEHPAKPDPPIWSEI 470 (1050)
T ss_pred HHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcH--HHccCCCccccchhcccccccccccchhhHHH
Confidence 87554444322110 01125678888999883 22211
Q ss_pred ----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE-EEEecCChhh------HHHHHHHHHHHHHcCCCCcE
Q 005365 522 ----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE-HLKESKDLEE------QAEMKKMYSLIDQYKLNGQF 590 (700)
Q Consensus 522 ----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l-~i~g~Gd~ee------~~~~~~l~~li~~l~L~~~V 590 (700)
..+.....+|+|++.+.||+..|++|+..+....+...+ +++|.++..+ .++...+.++++++++.++|
T Consensus 471 ~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V 550 (1050)
T TIGR02468 471 MRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQV 550 (1050)
T ss_pred HhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeE
Confidence 122333568899999999999999999998754333334 3455543211 23456788999999999999
Q ss_pred EEeccccCcCChhHHHHHHHccC----cEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 591 RWISSQMNRVRNGELYRYICDTK----GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~a----DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.|+| .++.+++..+|+. + |+||+||++|+||++++||||||+|||||+.||+.|+|.++.+|++++|+|++
T Consensus 551 ~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~e 625 (1050)
T TIGR02468 551 AYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQ 625 (1050)
T ss_pred EecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHH
Confidence 9999 5556888888875 5 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++|++|..++ +|++.|++|+++|++++.
T Consensus 626 aLA~AL~~LL----~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 626 AIADALLKLV----ADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred HHHHHHHHHh----hCHHHHHHHHHHHHHHHH
Confidence 9999999998 899999999999999875
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-51 Score=442.69 Aligned_cols=440 Identities=40% Similarity=0.588 Sum_probs=379.4
Q ss_pred ecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCccchhhhhcC
Q 005365 193 MLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (700)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 272 (700)
|.||++++.+.+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCcccee
Q 005365 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 352 (700)
Q Consensus 273 ~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e 352 (700)
++. ++|.||+||+++|+++++++|+.++..+.-+++.+++++|.|++...|...+ +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 454 8999999999999999999999999999999999998899999999887755 3445
Q ss_pred EecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 353 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 353 ~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
...++.+++|+++|++ ...+|. ..+||++..|+ .+...+.+.+.+ ||++|.++++++..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 5556668999999994 344566 77899999998 455566666666 999999999999999999999999999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCC-eEEeecC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG-LYRVVHG 511 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~-l~~v~nG 511 (700)
++.|.+...++...+.+|+.+...|+++++|+++...++.+| ++++++++++....+++|+++..++.|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999998 8888999
Q ss_pred CCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecC-----ChhhHHHHHHHHHHHHHcCC
Q 005365 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESK-----DLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 512 Id~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~G-----d~ee~~~~~~l~~li~~l~L 586 (700)
++.+.++++++++|.|..++++... .+.+.+.+ ...++..+.++|+. +.++.+++++|+++++++++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~i~~--~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDSIPE--PSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcccCC--CCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 9999999999999999998887221 11111111 11122333344422 66788899999999999999
Q ss_pred C-CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 587 N-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 587 ~-~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
. +.|.|+.. ....+.|++++++-.+|++|+. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.
T Consensus 344 ~g~~v~~~~s----~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~ 417 (495)
T KOG0853|consen 344 LGQFVWFLPS----TTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQ 417 (495)
T ss_pred cCceEEEecC----CchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-ch
Confidence 5 54555552 3345669999998889999999 9999999999999999999999999999999999999999 55
Q ss_pred H---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 666 E---QAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 666 e---aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ .+|+++.++. .||++|.+|+++|++++++
T Consensus 418 e~~~~~a~~~~kl~----~~p~l~~~~~~~G~~rV~e 450 (495)
T KOG0853|consen 418 EAVAELADALLKLR----RDPELWARMGKNGLKRVKE 450 (495)
T ss_pred HHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 5 4777777665 9999999999999999986
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=405.82 Aligned_cols=387 Identities=27% Similarity=0.485 Sum_probs=286.3
Q ss_pred eEEEEEccccccccCC-cCCC-CCcCcchhhhHHHHHHHHHHHHHHHHHCCC--ceeeccEEEeccCCCCC-CCCCccce
Q 005365 277 FNVVILTPHGYFAQDD-VLGY-PDTGGQVVYILDQVRALEDEMLLRIKQQGL--DITPQILIITRLLPDAV-GTTCGQRL 351 (700)
Q Consensus 277 mkI~iis~h~~~~~~~-~lG~-p~~GG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~i~VvT~~~p~~~-~~~~~~~~ 351 (700)
+||+++|+|++|+|.+ ++|+ |+.||+++|+. +|+++|+++|| +|+ |+|+..++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 7785 99999999999 67777799997 999 9998755421 22333333
Q ss_pred eEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE
Q 005365 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (700)
Q Consensus 352 e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~ 431 (700)
+.+ .++++++|+|+... .|.++..+++|+..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 24789999988653 23445667888888887777766543 23799999999888899999999999999
Q ss_pred EEEecCCccccCC---CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEe
Q 005365 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 508 (700)
Q Consensus 432 V~t~H~l~~~~~~---~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v 508 (700)
|+|.|+....... .....+..+...|++..+...|+.+++.+|.||++|..++. +.+..+ ..+....+.+|
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~---~~~~~~---~~~~~~ki~vI 214 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIE---EQYALY---DSYQPERMQVI 214 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHH---HHHHhc---cCCCccceEEE
Confidence 9999986433211 11111222223344445555678899999999999976543 222111 11222357788
Q ss_pred ecCCCCCCCccee------------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEE-EecCChh
Q 005365 509 VHGIDVFDPKFNI------------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL-KESKDLE 569 (700)
Q Consensus 509 ~nGId~~~~k~~v------------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~e 569 (700)
+||+|. .++.. .+++....+|+|++.+.||++.+++|+..+.......++++ +|.|+..
T Consensus 215 pnGvd~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~ 292 (439)
T TIGR02472 215 PPGVDL--SRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDI 292 (439)
T ss_pred CCCcCh--hhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCcccc
Confidence 999984 22211 12233457889999999999999999986432222334443 4444321
Q ss_pred h------HHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHcc---CcEEEeCCCCCCccHHHHHHHHcCCCEE
Q 005365 570 E------QAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTF 640 (700)
Q Consensus 570 e------~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~---aDvfV~PS~~E~fGl~vlEAMA~GlPVV 640 (700)
. .++.+++.++++++++.++|+|+| .++.+++..+|+.+ +|+||+||.+|+||++++||||||+|||
T Consensus 293 ~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV 368 (439)
T TIGR02472 293 RKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIV 368 (439)
T ss_pred ccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEE
Confidence 1 123455677889999999999999 55568888888752 2999999999999999999999999999
Q ss_pred EcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 641 ATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 641 AT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+++|++++.+
T Consensus 369 ~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 423 (439)
T TIGR02472 369 ATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNGIEGVRR 423 (439)
T ss_pred EeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999998865
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=339.90 Aligned_cols=371 Identities=20% Similarity=0.245 Sum_probs=267.8
Q ss_pred EEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCcc
Q 005365 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358 (700)
Q Consensus 279 I~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~ 358 (700)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. ..+ ..+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~~~---~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----VVE---VAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----ccc---cCC
Confidence 578888887653 355667799999999 77777899999999 999764322111 111 123
Q ss_pred ceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 359 ~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
++++++++.....+ .+...+..++..|.....+.+......+||+||+|.+.+++++..+++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654322 1111122223334333443333333458999999998888888888888999999999987
Q ss_pred ccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc
Q 005365 439 EKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518 (700)
Q Consensus 439 ~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k 518 (700)
...+. ..+..... .........|+..++.+|.|+++|+...+.+.+.++ .....+..++||++.. .
T Consensus 135 ~~~~~----~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~-------~~~~ki~vi~ngvd~~--~ 200 (405)
T TIGR03449 135 AAVKN----AALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYD-------ADPDRIDVVAPGADLE--R 200 (405)
T ss_pred HHHHH----HhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcC-------CChhhEEEECCCcCHH--H
Confidence 53220 01100000 000111223667899999999999876654443332 1123467889999741 1
Q ss_pred cee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC--ccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 519 FNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE--NKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 519 ~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~--~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
+.. ++++....+|.|++.+.||++.++++++.+....++ ..++++|+++++..++.+++++++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~ 280 (405)
T TIGR03449 201 FRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELG 280 (405)
T ss_pred cCCCcHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcC
Confidence 110 123344678999999999999999999999877665 5667777543221134467888999999
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
+.++|+|+| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||.+|++.++.+|++++++|+
T Consensus 281 l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~ 355 (405)
T TIGR03449 281 IADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDP 355 (405)
T ss_pred CCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCH
Confidence 999999999 5667899999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ +|++.+++|++++++.++
T Consensus 356 ~~la~~i~~~l----~~~~~~~~~~~~~~~~~~ 384 (405)
T TIGR03449 356 ADWADALARLL----DDPRTRIRMGAAAVEHAA 384 (405)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999998 899999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=325.63 Aligned_cols=372 Identities=28% Similarity=0.443 Sum_probs=278.9
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+|++.|++|.. .-|.|+.||.++++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6889998876532 235689999999999 66667799999999 998654322111 01112
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.++.+++++..... ..++..+++++..|...+.+.+.... .+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36778887765431 12233456666666666666665532 3899999999888888888999999999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
............|. +........|+.+++.+|.|+++|......+.+..... ......++||++..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~-------~~~~~vi~ng~~~~-- 199 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAY-------PRRIRVVPPGVDLE-- 199 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHcccc-------ccccEEECCCCCcc--
Confidence 76543222111111 11222233477889999999999987765544433211 12266788998732
Q ss_pred cce------------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhH-HHHHHHHHHHHHc
Q 005365 518 KFN------------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQ-AEMKKMYSLIDQY 584 (700)
Q Consensus 518 k~~------------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~-~~~~~l~~li~~l 584 (700)
.+. ..++.....+|.|++.+.||++.+++++..+....++..++++|++..... .....++++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~ 279 (398)
T cd03800 200 RFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELAREL 279 (398)
T ss_pred ceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhc
Confidence 111 112334467899999999999999999999987777788888887754322 2234567888889
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.||..|+++++.+|++++++|
T Consensus 280 ~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~ 354 (398)
T cd03800 280 GVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRD 354 (398)
T ss_pred CCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCC
Confidence 9999999999 6667899999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++++|.+++ +|++.+++|+++|++++++
T Consensus 355 ~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 385 (398)
T cd03800 355 PEALAAALRRLL----TDPALRRRLSRAGLRRARA 385 (398)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999998854
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=336.73 Aligned_cols=376 Identities=16% Similarity=0.184 Sum_probs=252.6
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe-
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV- 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i- 354 (700)
|||+++|.+.+|. ..+||...++. .|+++|+++||+|+ |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998864 34799999999 66667799999999 999876542111000 001110
Q ss_pred --------cCccceEEEEecCCCcccccccccccccchhhH---H---HHHHHHHHHHHHHcCCCCeEEEEcCCCchHHH
Q 005365 355 --------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYL---E---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (700)
Q Consensus 355 --------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l---~---~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva 420 (700)
...+++++++++.... ..+..++.+. . .|...+...+. ....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 1124677887765321 1222223222 1 23344444443 33458999999999999999
Q ss_pred HHHHHhc-----CCcEEEEecCCccccCCCC------chhhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHhhh
Q 005365 421 SLLAHKL-----GVTQCTIAHALEKTKYPDS------DIYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSK 488 (700)
Q Consensus 421 ~lla~~~-----giP~V~t~H~l~~~~~~~~------~~~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k 488 (700)
.++++.. ++|+|+|+|++........ +..+..+. ....+...+...+.+++.||.|+|+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 7999999999854321100 00111000 0000111122345678999999999987765443
Q ss_pred hhhccccc--cccccCCCeEEeecCCCCCCCccee------------------------------cC-CCCccccccCCc
Q 005365 489 DTVGQYES--HTAFTLPGLYRVVHGIDVFDPKFNI------------------------------VS-PGADMSIYFPYT 535 (700)
Q Consensus 489 ~~~~~y~~--~~~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip-~G~d~~~F~g~~ 535 (700)
+....+.- ........+..|+||||.. .++. ++ +.....+|+||+
T Consensus 214 ~~~~~~gl~~~~~~~~~ki~vI~NGid~~--~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl 291 (466)
T PRK00654 214 TPEFGYGLEGLLRARSGKLSGILNGIDYD--IWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRL 291 (466)
T ss_pred cccCCcChHHHHHhcccCceEecCCCCcc--ccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeecc
Confidence 31100000 0001123477899999842 1110 11 233467789999
Q ss_pred hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEE-eccccCcCChhHHHHHHHccCc
Q 005365 536 EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~d~v~~~el~~~la~~aD 614 (700)
.++||++.+++|++.+... +.+++++|.|+.+ +.+++++++++++ +++.+ .|+ +.+.+..+++. +|
T Consensus 292 ~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~~---~~~~l~~l~~~~~--~~v~~~~g~-----~~~~~~~~~~~-aD 358 (466)
T PRK00654 292 TEQKGLDLVLEALPELLEQ--GGQLVLLGTGDPE---LEEAFRALAARYP--GKVGVQIGY-----DEALAHRIYAG-AD 358 (466)
T ss_pred ccccChHHHHHHHHHHHhc--CCEEEEEecCcHH---HHHHHHHHHHHCC--CcEEEEEeC-----CHHHHHHHHhh-CC
Confidence 9999999999999998754 6778888877643 3456777887775 45665 452 23445567775 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC------CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|+++++++|.++++.. .|++.+.+
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~-~~~~~~~~ 437 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELY-RQPPLWRA 437 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 9999999999999999999999999999999999999988 8999999999999999999987322 47788999
Q ss_pred HHHHHHH
Q 005365 689 ISLGGLK 695 (700)
Q Consensus 689 ms~~ar~ 695 (700)
|+++|.+
T Consensus 438 ~~~~~~~ 444 (466)
T PRK00654 438 LQRQAMA 444 (466)
T ss_pred HHHHHhc
Confidence 9988863
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=326.13 Aligned_cols=382 Identities=15% Similarity=0.139 Sum_probs=257.5
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCcc-----ce
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQ-----RL 351 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~-----~~ 351 (700)
|||+++|...+|- -.+||...++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998763 34799999999 66666799999999 9998765432110000 00
Q ss_pred e--------E----ecCccceEEEEecCCCccccccc---ccc--cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC
Q 005365 352 E--------K----VYGTKYSDILRVPFRTEKGVVRK---WIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS 414 (700)
Q Consensus 352 e--------~----i~~~~~v~I~rvp~~~~~~~~~~---~ls--r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~ 414 (700)
+ . ....++++++++..... +.. ..+ ..+.......|...+...+.+ ...+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCc
Confidence 0 0 01113566666654321 000 000 011111223344555554443 3568999999999
Q ss_pred CchHHHHHHHHhcC---CcEEEEecCCccccCCCC-ch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 415 DGNIVASLLAHKLG---VTQCTIAHALEKTKYPDS-DI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 415 ~~~lva~lla~~~g---iP~V~t~H~l~~~~~~~~-~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
.+++++.++++..+ +|+|+|+|++........ .. .|..+. ..+.+...+...+.+++.||.|+++|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999998888776 999999999864321111 00 011000 001111123335678999999999998776
Q ss_pred Hhhhhhhccccccc--cccCCCeEEeecCCCCCCCccee------------------------------cC--CCCcccc
Q 005365 485 AGSKDTVGQYESHT--AFTLPGLYRVVHGIDVFDPKFNI------------------------------VS--PGADMSI 530 (700)
Q Consensus 485 ~~~k~~~~~y~~~~--~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip--~G~d~~~ 530 (700)
+.+......+.-.. ......+..|+||||.. .++. ++ ++....+
T Consensus 218 ~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~--~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~ 295 (473)
T TIGR02095 218 REILTPEFGYGLDGVLKARSGKLRGILNGIDTE--VWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFG 295 (473)
T ss_pred HHhcCCcCCccchhHHHhcCCCeEEEeCCCCcc--ccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEE
Confidence 54433210010000 00123577899999842 2210 11 1344578
Q ss_pred ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 531 YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 531 F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
|+|++.++||++.+++|++.+... +.+++++|.|+.+ ..+++++++++++ +++.|.+ ..+.+++..+++
T Consensus 296 ~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~---~~~~l~~~~~~~~--~~v~~~~----~~~~~~~~~~~~ 364 (473)
T TIGR02095 296 VISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDPE---LEEALRELAERYP--GNVRVII----GYDEALAHLIYA 364 (473)
T ss_pred EEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCHH---HHHHHHHHHHHCC--CcEEEEE----cCCHHHHHHHHH
Confidence 999999999999999999998754 4778888887642 3356677776654 6788887 445567778888
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC------CeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
. +|++|+||.+|+||++++|||+||+|||+|++||+.|+|.++ .+|++++++|+++++++|.++++....|++
T Consensus 365 ~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~ 443 (473)
T TIGR02095 365 G-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPS 443 (473)
T ss_pred h-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 6 999999999999999999999999999999999999999998 899999999999999999998854444999
Q ss_pred HHHHHHHHHHH
Q 005365 685 YWDKISLGGLK 695 (700)
Q Consensus 685 ~~~~ms~~ar~ 695 (700)
.|++|++++++
T Consensus 444 ~~~~~~~~~~~ 454 (473)
T TIGR02095 444 LWEALQKNAMS 454 (473)
T ss_pred HHHHHHHHHhc
Confidence 99999998864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=316.82 Aligned_cols=346 Identities=15% Similarity=0.190 Sum_probs=243.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.++ |..||.++++. +|++.|+++||+|+ |+|+..+...+. +.. .
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~~~--~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------RYL--T 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------ccc--c
Confidence 7999998776 45699999999 67777799999999 999764322111 111 2
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t~ 435 (700)
.++.++++|...... ...+ .....+...+.+.+.+. +|||||+|.....+ .+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~-~~~~~~~~~l~~~~~~~---~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTL-PTFFGTFPLLRNILIRE---RITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccc-cchhhhHHHHHHHHHhc---CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653210 0011 11111222233333333 89999999865543 46677888999999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV- 514 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~- 514 (700)
|+..... .....+ ..+ ..+..++++|.|+++|....+......+ ........++||+|.
T Consensus 121 h~~~~~~--~~~~~~---------~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~-------~~~~k~~vi~ngvd~~ 180 (398)
T cd03796 121 HSLFGFA--DASSIH---------TNK--LLRFSLADVDHVICVSHTSKENTVLRAS-------LDPERVSVIPNAVDSS 180 (398)
T ss_pred ccccccc--chhhHH---------hhH--HHHHhhccCCEEEEecHhHhhHHHHHhC-------CChhhEEEEcCccCHH
Confidence 9864211 000000 001 1345688999999999776542211111 112246788999983
Q ss_pred -CCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEe
Q 005365 515 -FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 593 (700)
Q Consensus 515 -~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~fl 593 (700)
+.+.....+++....+|.|+..+.||++.+++++..+....++..+.++|.|. ..+.++++++++++.++|+|+
T Consensus 181 ~f~~~~~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~ 255 (398)
T cd03796 181 DFTPDPSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP-----KRILLEEMREKYNLQDRVELL 255 (398)
T ss_pred HcCCCcccCCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc-----hHHHHHHHHHHhCCCCeEEEe
Confidence 11111112234446779999999999999999999988777778888887663 235688889999999999999
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
| .++.+++..+++. +|++|+||..|+||++++||||||+|||+|+.||.+|++.++. ++++++ |+++++++|.
T Consensus 256 G----~~~~~~~~~~l~~-ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 256 G----AVPHERVRDVLVQ-GHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAEP-DVESIVRKLE 328 (398)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecCC-CHHHHHHHHH
Confidence 9 6667899999997 9999999999999999999999999999999999999998764 455544 8999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 674 DFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 674 ~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++ .++.....+++++++++.+
T Consensus 329 ~~l----~~~~~~~~~~~~~~~~~~~ 350 (398)
T cd03796 329 EAI----SILRTGKHDPWSFHNRVKK 350 (398)
T ss_pred HHH----hChhhhhhHHHHHHHHHHh
Confidence 998 5666566778888887765
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=315.38 Aligned_cols=365 Identities=13% Similarity=0.118 Sum_probs=249.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC--CCCC-CCCCccceeE
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL--PDAV-GTTCGQRLEK 353 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~--p~~~-~~~~~~~~e~ 353 (700)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998776 45689999998 67777799999999 999652 2110 0000100001
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc--hHHHHHHHHhcCCcE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQ 431 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~--~lva~lla~~~giP~ 431 (700)
....++++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1112468999988643210 00000 11111 12333333333332225899999987543 456777888899999
Q ss_pred EEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC
Q 005365 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (700)
Q Consensus 432 V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG 511 (700)
++++|+.+........ .++. ....++.. ..|+.+++.||.|+++|...++.+++. + .....+.+++||
T Consensus 135 v~~~~d~~~~~~~~~~-~~~~-~~~~~~~~--~~~~~~~~~ad~ii~~S~~~~~~~~~~-~-------~~~~~i~vi~ng 202 (412)
T PRK10307 135 WLHIQDYEVDAAFGLG-LLKG-GKVARLAT--AFERSLLRRFDNVSTISRSMMNKAREK-G-------VAAEKVIFFPNW 202 (412)
T ss_pred EEEeccCCHHHHHHhC-CccC-cHHHHHHH--HHHHHHHhhCCEEEecCHHHHHHHHHc-C-------CCcccEEEECCC
Confidence 9999986532110000 0000 00011111 237788999999999997776544332 1 122346778999
Q ss_pred CCCCCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHH
Q 005365 512 IDVFDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKM 577 (700)
Q Consensus 512 Id~~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l 577 (700)
++. +.+.- ++++....+|.|++.+.||++.+++|++.+. ..++..++++|.|. ..+++
T Consensus 203 vd~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~-~~~~~~l~ivG~g~-----~~~~l 274 (412)
T PRK10307 203 SEV--ARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLR-DRPDLIFVICGQGG-----GKARL 274 (412)
T ss_pred cCH--hhcCCCCccchHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhc-cCCCeEEEEECCCh-----hHHHH
Confidence 984 22211 1233346789999999999999999998874 34566777777653 33567
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC----ccHHHHHHHHcCCCEEEcCCCC--ccccc
Q 005365 578 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA----FGLTVVEAMTCGLPTFATCKGG--PAEII 651 (700)
Q Consensus 578 ~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~----fGl~vlEAMA~GlPVVAT~~GG--~~EiI 651 (700)
+++++++++. +|+|+| .++.+++..+++. +|++|+||..|+ +|.+++|||+||+|||+|+.|| ..|++
T Consensus 275 ~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i 348 (412)
T PRK10307 275 EKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLV 348 (412)
T ss_pred HHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHH
Confidence 8888889987 699999 5567899999997 999999999998 5778899999999999999876 46888
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 652 VNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 652 ~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
. .+|++++++|++++|++|.+++ +|++.+++|+++|++++++
T Consensus 349 ~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~ 390 (412)
T PRK10307 349 E--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAREYAER 390 (412)
T ss_pred h--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 6 5999999999999999999998 8999999999999999875
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=322.90 Aligned_cols=408 Identities=15% Similarity=0.165 Sum_probs=267.5
Q ss_pred HHhhcCCCccchhhhhc--CC--CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceee
Q 005365 255 LDLLEAPDPCTLETFLG--RI--PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITP 330 (700)
Q Consensus 255 ~~~~~~p~~~~~~~~~~--~~--pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~ 330 (700)
.++.+.+|..-+..|+. +. .+.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~- 519 (977)
T PLN02939 456 LSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE- 519 (977)
T ss_pred HHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE-
Confidence 45666777666666653 22 2459999999988764 46899999988 56666799999999
Q ss_pred ccEEEeccCCCCCCCCC-cc-----cee-EecC-----------ccceEEEEecCCCcccccccccccccchh------h
Q 005365 331 QILIITRLLPDAVGTTC-GQ-----RLE-KVYG-----------TKYSDILRVPFRTEKGVVRKWISRFEVWP------Y 386 (700)
Q Consensus 331 ~i~VvT~~~p~~~~~~~-~~-----~~e-~i~~-----------~~~v~I~rvp~~~~~~~~~~~lsr~~i~~------~ 386 (700)
|+++.++....... .. ..+ .+.+ .+++.++.+...... .+..|..++. .
T Consensus 520 ---VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~R 592 (977)
T PLN02939 520 ---IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKR 592 (977)
T ss_pred ---EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHH
Confidence 99998753320000 00 000 0100 123444444211000 0122222331 1
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH------hcCCcEEEEecCCccccCCC------Cchhhhhcc
Q 005365 387 LETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH------KLGVTQCTIAHALEKTKYPD------SDIYWKNLD 454 (700)
Q Consensus 387 l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~------~~giP~V~t~H~l~~~~~~~------~~~~w~~~~ 454 (700)
+..|...++..+. ..+.+|||||+|.|..++++.++.+ ..++|+|+|+|++....... .+..|..+.
T Consensus 593 F~~FsrAaLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 593 FSYFSRAALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHH-hcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 2233444444443 3356899999999999997554433 23579999999986443211 111111110
Q ss_pred --ccc--chhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccc-cccccccCCCeEEeecCCCCC--CCcce-------
Q 005365 455 --DKY--HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQY-ESHTAFTLPGLYRVVHGIDVF--DPKFN------- 520 (700)
Q Consensus 455 --~~y--~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y-~~~~~~~~p~l~~v~nGId~~--~~k~~------- 520 (700)
... .+...+..-+..+..||.|+|+|+..+..+....+.- .......-..+..|+||||.. .+...
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Y 751 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQY 751 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCcccccccccc
Confidence 000 0111121223456679999999998887665422110 000111223578899999842 22100
Q ss_pred -------------------ecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHH
Q 005365 521 -------------------IVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 521 -------------------vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
-++ +......|+||+.++||++.+++|+..+.. .+..++++|.|.. ..+.+.++
T Consensus 752 s~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~--~~~e~eL~ 827 (977)
T PLN02939 752 NANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPV--PHIQREFE 827 (977)
T ss_pred ChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCc--HHHHHHHH
Confidence 011 123456789999999999999999988874 3567888887732 23456788
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc-----
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----- 653 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d----- 653 (700)
++++++++.++|.|+| ..+......+|+. +|+||+||++|+||++++|||+||+|+|++++||+.|+|.+
T Consensus 828 ~La~~l~l~drV~FlG----~~de~lah~IYAa-ADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~ 902 (977)
T PLN02939 828 GIADQFQSNNNIRLIL----KYDEALSHSIYAA-SDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDET 902 (977)
T ss_pred HHHHHcCCCCeEEEEe----ccCHHHHHHHHHh-CCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccc
Confidence 8999999999999999 4444556778886 99999999999999999999999999999999999999976
Q ss_pred ----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 654 ----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 654 ----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+.+||+++++|+++++++|.+++..+..||+.|++|++++.+
T Consensus 903 i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~ 948 (977)
T PLN02939 903 IPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN 948 (977)
T ss_pred cccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 579999999999999999999886556789999999988753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=312.08 Aligned_cols=259 Identities=18% Similarity=0.218 Sum_probs=203.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHH--hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~--~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~ 481 (700)
.+||+||+|++..+..+..+++ ..+.|.++++|+....... + ...+.. .....++++|.|+++|.
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-----~---~~~~~~-----~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-----V---LNHYTP-----EYQQLFRRGDLMLPISD 183 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-----h---hhhhhH-----HHHHHHHhCCEEEECCH
Confidence 4799999999887777776665 3445778899986432110 0 001110 12346789999999997
Q ss_pred HHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 482 ~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
..++.+.+. + .....+.+++||++. ..+.. .+......+|+|++.+.||++.++++++.+....++
T Consensus 184 ~~~~~l~~~-g-------~~~~ki~vi~nGvd~--~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~ 253 (406)
T PRK15427 184 LWAGRLQKM-G-------CPPEKIAVSRMGVDM--TRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVA 253 (406)
T ss_pred HHHHHHHHc-C-------CCHHHEEEcCCCCCH--HHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC
Confidence 765543321 1 111236678899983 22221 112223467899999999999999999999877777
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC------CCccHHHHH
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVE 631 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~------E~fGl~vlE 631 (700)
..+.++|.|+ ..++++++++++++.++|.|+| .++.+++..+|+. +|+||+||.. ||||++++|
T Consensus 254 ~~l~ivG~G~-----~~~~l~~~~~~~~l~~~V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llE 323 (406)
T PRK15427 254 FRYRILGIGP-----WERRLRTLIEQYQLEDVVEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALME 323 (406)
T ss_pred EEEEEEECch-----hHHHHHHHHHHcCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHH
Confidence 7888888763 3467889999999999999999 6667899999997 9999999974 999999999
Q ss_pred HHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHh
Q 005365 632 AMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 632 AMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-dp~~~~~ms~~ar~ra~e 699 (700)
|||||+|||+|+.||.+|+|.+|.+|++++++|++++|++|.+++ + ||+.+++|+++|++++.+
T Consensus 324 Ama~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~ 388 (406)
T PRK15427 324 AMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFS----QLDTDELAPVVKRAREKVET 388 (406)
T ss_pred HHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 7 999999999999999875
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=314.19 Aligned_cols=383 Identities=16% Similarity=0.151 Sum_probs=255.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc--ccee---
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG--QRLE--- 352 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~--~~~e--- 352 (700)
||+++|+..+|- ..+||...++. .|+++|+++||+|+ |+|+.++........ ....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987754 36899999999 56666799999999 999876543211000 0000
Q ss_pred ------------EecCccceEEEEecCCCccc--cc--ccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc
Q 005365 353 ------------KVYGTKYSDILRVPFRTEKG--VV--RKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG 416 (700)
Q Consensus 353 ------------~i~~~~~v~I~rvp~~~~~~--~~--~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~ 416 (700)
.....+++.+++++...... .+ ..+.....-...+..|...+...+.+ ...+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112356777665433210 00 00000011111122344445544444 246899999999999
Q ss_pred hHHHHHHHHhc------CCcEEEEecCCccccCCCCc------hhhh--hcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 417 NIVASLLAHKL------GVTQCTIAHALEKTKYPDSD------IYWK--NLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 417 ~lva~lla~~~------giP~V~t~H~l~~~~~~~~~------~~w~--~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
++++..+++.. ++|+|+|+|++......... ..|. .....+.+...+..++.++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 98888887763 89999999998654321110 0010 0000111222344577889999999999987
Q ss_pred HHHhhhhhhcccc--ccccccCCCeEEeecCCCCCCCccee------------------------------c--CCCCcc
Q 005365 483 EIAGSKDTVGQYE--SHTAFTLPGLYRVVHGIDVFDPKFNI------------------------------V--SPGADM 528 (700)
Q Consensus 483 ~~~~~k~~~~~y~--~~~~~~~p~l~~v~nGId~~~~k~~v------------------------------I--p~G~d~ 528 (700)
.++.+.+...-+. .........+..|+||++.. .+.. + .+....
T Consensus 221 ~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~--~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~ 298 (476)
T cd03791 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYD--VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPL 298 (476)
T ss_pred HHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCc--ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCE
Confidence 7654433210000 00001124688999999842 1110 0 134445
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRY 608 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~ 608 (700)
.+|+|++.+.||++.++++++.+... +.+++++|.|+.+ ..+.++++++++ .++|.|++ ..+.+++..+
T Consensus 299 i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~---~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~ 367 (476)
T cd03791 299 FGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDPE---YEEALRELAARY--PGRVAVLI----GYDEALAHLI 367 (476)
T ss_pred EEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCHH---HHHHHHHHHHhC--CCcEEEEE----eCCHHHHHHH
Confidence 68999999999999999999998764 3678888887543 345666666665 56788776 3344566677
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCC------eEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------SGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~------~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
++. +|++++||.+|+||++++|||+||+|||+|++||+.|+|.++. +|++++++|+++++++|.++++.+ .+
T Consensus 368 ~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~-~~ 445 (476)
T cd03791 368 YAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALY-RD 445 (476)
T ss_pred HHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHH-cC
Confidence 776 9999999999999999999999999999999999999999988 999999999999999999987432 46
Q ss_pred HHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLK 695 (700)
Q Consensus 683 p~~~~~ms~~ar~ 695 (700)
++.|.+|++++.+
T Consensus 446 ~~~~~~~~~~~~~ 458 (476)
T cd03791 446 PEAWRKLQRNAMA 458 (476)
T ss_pred HHHHHHHHHHHhc
Confidence 8999999998865
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=327.13 Aligned_cols=358 Identities=14% Similarity=0.050 Sum_probs=241.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCC-CCccce-eE
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT-TCGQRL-EK 353 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~-~~~~~~-e~ 353 (700)
+|||++||.+..|- ..+||...++. .|+++|+++||+|. |+|+.++..... ...... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998864 35799999999 66666799999999 999986531100 000000 00
Q ss_pred e-----------cCccceEEEEecCCCcccccccccccccch------hhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc
Q 005365 354 V-----------YGTKYSDILRVPFRTEKGVVRKWISRFEVW------PYLETYTEDVAVEIAKELQGKPDLIIGNYSDG 416 (700)
Q Consensus 354 i-----------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~------~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~ 416 (700)
+ ...+++.++.+.... + +..+..++ ..+..|...++..+. ....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 011245555554321 1 11111122 223334444444443 3355899999999999
Q ss_pred hHHHHHHHHh------cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhh
Q 005365 417 NIVASLLAHK------LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490 (700)
Q Consensus 417 ~lva~lla~~------~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~ 490 (700)
++++.++++. .++|+|+|+|++.... ++ -..++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9988888764 3589999999864211 00 1245788999999998876544331
Q ss_pred hccccccccccCCCeEEeecCCCCC--CCc---cee------------------------cC-CCCccccccCCchhhhc
Q 005365 491 VGQYESHTAFTLPGLYRVVHGIDVF--DPK---FNI------------------------VS-PGADMSIYFPYTEEKRR 540 (700)
Q Consensus 491 ~~~y~~~~~~~~p~l~~v~nGId~~--~~k---~~v------------------------Ip-~G~d~~~F~g~~~~~Kg 540 (700)
.. . ......+..|+||||.. .+. +-. ++ .......|+||+.++||
T Consensus 780 ~~-l----~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKG 854 (1036)
T PLN02316 780 SA-I----APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKG 854 (1036)
T ss_pred cC-c----ccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccC
Confidence 10 0 00113578999999852 111 000 11 12335678999999999
Q ss_pred hhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC--CCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 541 LKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 541 l~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L--~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
++.+++|+..++.. +.+++|+|.|. +..+.+.+.++++++++ +++|.|.|..+ ......+|+. +|+||+
T Consensus 855 vdlLi~Al~~ll~~--~~qlVIvG~Gp--d~~~e~~l~~La~~Lg~~~~~rV~f~g~~d----e~lah~iyaa-ADiflm 925 (1036)
T PLN02316 855 IHLIKHAIWRTLER--NGQVVLLGSAP--DPRIQNDFVNLANQLHSSHHDRARLCLTYD----EPLSHLIYAG-ADFILV 925 (1036)
T ss_pred HHHHHHHHHHHhhc--CcEEEEEeCCC--CHHHHHHHHHHHHHhCccCCCeEEEEecCC----HHHHHHHHHh-CcEEEe
Confidence 99999999998753 57788888762 22345778888888876 67899998432 2222367775 999999
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC-------------CeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG-------------KSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg-------------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
||++|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|+++++++|.+++... ++.
T Consensus 926 PS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~---~~~ 1002 (1036)
T PLN02316 926 PSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAW---YDG 1002 (1036)
T ss_pred CCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhh---hhh
Confidence 999999999999999999999999999999999884 6999999999999999999998422 233
Q ss_pred HHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRI 697 (700)
Q Consensus 686 ~~~ms~~ar~ra 697 (700)
...+++.+++.+
T Consensus 1003 ~~~~~~~~r~~m 1014 (1036)
T PLN02316 1003 RDWFNSLCKRVM 1014 (1036)
T ss_pred HHHHHHHHHHHH
Confidence 333444444443
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=313.79 Aligned_cols=347 Identities=16% Similarity=0.195 Sum_probs=236.1
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
.++|||+++. +..|. +..||.+.++. +++++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~~-------~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSPF-------SYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcCC-------cccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999997 32221 45699999999 66777799999999 998653211 01
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQC 432 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V 432 (700)
.. ++.++++..... +. ..+... .+ .+...+.+.+.+. +||+||+|.... .+.+..+++..++|+|
T Consensus 107 ~~---g~~v~~~~~~~~-~~----~~~~~~-~~--~~~~~l~~~i~~~---kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 FH---GAKVIGSWSFPC-PF----YQKVPL-SL--ALSPRIISEVARF---KPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred cc---CceeeccCCcCC-cc----CCCcee-ec--cCCHHHHHHHHhC---CCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 11 234433322111 00 000000 00 0111334444444 899999987543 3456667788899999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+............| . +... +..++..++.+|.|+++|....+.+.+... .....+.+++||+
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~-------~~~~kv~vi~nGv 238 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--L---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAAGV-------TAANRIRVWNKGV 238 (465)
T ss_pred EEEecCchhhhhcccchh--h---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHcCC-------CCcCeEEEeCCcc
Confidence 999976432211111111 0 0111 112456788999999999776654433210 1123467788999
Q ss_pred CCC--CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHH
Q 005365 513 DVF--DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLI 581 (700)
Q Consensus 513 d~~--~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li 581 (700)
|.. .+... ..++.....+|.|++.+.||++.++++++.+ ++..++++|.| ++ .+++++++
T Consensus 239 d~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~----~~~~l~ivG~G--~~---~~~l~~~~ 309 (465)
T PLN02871 239 DSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PGARLAFVGDG--PY---REELEKMF 309 (465)
T ss_pred CccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC----CCcEEEEEeCC--hH---HHHHHHHh
Confidence 842 11100 0122334578999999999999999888765 36677777755 32 34555555
Q ss_pred HHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc---CCeEE
Q 005365 582 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGY 658 (700)
Q Consensus 582 ~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d---g~~G~ 658 (700)
+. .+|.|+| .++.+++..+|+. +|+||+||..|+||++++||||||+|||+|+.||..|++++ +.+|+
T Consensus 310 ~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~ 380 (465)
T PLN02871 310 AG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGF 380 (465)
T ss_pred cc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceE
Confidence 43 4699999 5566899999997 99999999999999999999999999999999999999999 99999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|+++++++|.+++ +|++.+++|+++|++++++
T Consensus 381 lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 417 (465)
T PLN02871 381 LYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEVEK 417 (465)
T ss_pred EeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 8999999999999998753
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=299.21 Aligned_cols=340 Identities=20% Similarity=0.250 Sum_probs=236.3
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++. |..||.++++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 79999973 33599999999 67777799999999 99865332110 00
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh----cCCcEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK----LGVTQC 432 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~----~giP~V 432 (700)
.+++.+..++.... +. .....+.......+.+.+.+. +||+||+|++.....+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~l~~~i~~~---~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-PL-------FQYPPYDLALASKIAEVAKRY---KLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-ch-------hhcchhHHHHHHHHHHHHhcC---CccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332211 00 001112222233444444443 8999999986554433333332 379999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+........ ...+. ..++.+++.+|.|++.|....+.+.+.+. ....+.+++||+
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--------~~~~i~vi~n~~ 174 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYELFD--------ITKEIEVIPNFV 174 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHhcC--------CcCCEEEecCCc
Confidence 9999753321110 01111 12456788999999999877654443321 112366788888
Q ss_pred CCCC--Ccc--e-----ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH
Q 005365 513 DVFD--PKF--N-----IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ 583 (700)
Q Consensus 513 d~~~--~k~--~-----vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~ 583 (700)
+... +.. . -.+++....+|+|+..+.||++.+++++..+... .+..++++|.|.. .+.+++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~-----~~~~~~~~~~ 248 (371)
T cd04962 175 DEDRFRPKPDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPE-----RSPAERLARE 248 (371)
T ss_pred CHhhcCCCchHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc-CCceEEEEcCCcC-----HHHHHHHHHH
Confidence 7321 100 0 0122333467899999999999999999988755 3467777776633 2457778888
Q ss_pred cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 584 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 584 l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+++.++|.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+|+.||.+|++.++.+|++++++
T Consensus 249 ~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~ 321 (371)
T cd04962 249 LGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVG 321 (371)
T ss_pred cCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCC
Confidence 9999999999953 357888886 999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++++|..++ +||+.+.+|+++|++.+.+
T Consensus 322 ~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 353 (371)
T cd04962 322 DVEAMAEYALSLL----EDDELWQEFSRAARNRAAE 353 (371)
T ss_pred CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999999999998 8999999999999998654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=301.59 Aligned_cols=350 Identities=19% Similarity=0.269 Sum_probs=244.3
Q ss_pred eEEEEEccccccccCCcCCCCC-cCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEec
Q 005365 277 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~ 355 (700)
|||++++..+. |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987654 33 499999999 666666777 7888 77643211 0
Q ss_pred CccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEe
Q 005365 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~ 435 (700)
..+++.+.+.+..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1124666665432210 011112222222221 1111236999999998887777777778899999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+.......... .....+.+..+ .++.+++.+|.|+++|+...+.+.+.+.. +....+.+++||++..
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~------~~~~~i~vi~ng~~~~ 181 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPD------LDPEKVHVIYNGIDTK 181 (388)
T ss_pred eccccccccccc----ccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCC------CCcceEEEecCCCChh
Confidence 987543211000 01111223333 36778999999999998776655443311 1223467889999742
Q ss_pred CCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 516 DPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 516 ~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
.+.. ++++....+|.|++.+.||++.++++++.+. ++..++++|+|... .+..+++++.+.++
T Consensus 182 --~~~~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~~-~~~~~~~~~~~~~~ 255 (388)
T TIGR02149 182 --EYKPDDGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPDT-PEVAEEVRQAVALL 255 (388)
T ss_pred --hcCCCchHHHHHHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh---hcCcEEEEeCCCCc-HHHHHHHHHHHHHh
Confidence 1110 1233346789999999999999999999874 35567776654322 13446677777777
Q ss_pred CC-CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 585 KL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 585 ~L-~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+. .++|.|++. .++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|+++++.+|++++++
T Consensus 256 ~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~ 331 (388)
T TIGR02149 256 DRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPD 331 (388)
T ss_pred ccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCC
Confidence 65 345887652 5667999999997 999999999999999999999999999999999999999999999999999
Q ss_pred CH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HG------EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~------eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+ ++++++|.+++ +|++.+++|+++|++++.+
T Consensus 332 ~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 369 (388)
T TIGR02149 332 NSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAEE 369 (388)
T ss_pred CCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 98 99999999988 8999999999999998764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=309.44 Aligned_cols=385 Identities=15% Similarity=0.154 Sum_probs=250.6
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC--Ccc--
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--CGQ-- 349 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~--~~~-- 349 (700)
|| |||+++|....|- ..+||..=.+- .|.++|+++||+|. |+++.++.-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999988864 57899887777 55666799999999 9998765432110 000
Q ss_pred ceeEe--cCccceEEEEec---CC--Ccccc-c--ccccccccch-------------hhHHHHHHHHHHHHHHHcCCCC
Q 005365 350 RLEKV--YGTKYSDILRVP---FR--TEKGV-V--RKWISRFEVW-------------PYLETYTEDVAVEIAKELQGKP 406 (700)
Q Consensus 350 ~~e~i--~~~~~v~I~rvp---~~--~~~~~-~--~~~lsr~~i~-------------~~l~~f~~~~~~~l~~~~~~~p 406 (700)
....+ .......+.++- .. ...-+ + ..+..|..++ ..+..|...++..+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 00011 000011222110 00 00000 0 0111222222 112223333444443 334589
Q ss_pred eEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCCCCc-----hhhhhcccccchhhhhhHHHHHHhhCC
Q 005365 407 DLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDSD-----IYWKNLDDKYHFSCQFTADLIAMNHTD 474 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~~~~-----~~w~~~~~~y~~~~~~~~E~~al~~AD 474 (700)
||||+|.|.+++++.+++++. ++|+|+|+|++......... ..+............+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887654 79999999997543211100 001100000000011233566899999
Q ss_pred EEEecCHHHHHhhhhh-hccccccccc--cCCCeEEeecCCCCCCCcceec-----------------------------
Q 005365 475 FIITSTFQEIAGSKDT-VGQYESHTAF--TLPGLYRVVHGIDVFDPKFNIV----------------------------- 522 (700)
Q Consensus 475 ~IIt~S~~~~~~~k~~-~~~y~~~~~~--~~p~l~~v~nGId~~~~k~~vI----------------------------- 522 (700)
.|+|+|+..++.+++. ...|.-.... .-..+..|+||||.. .++..
T Consensus 223 ~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~--~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lg 300 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTR--QWNPSTDKLIKKRYSIERLDGKLENKKALLEEVG 300 (489)
T ss_pred cceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccc--ccCCcccccccccCCcchhhhHHHHHHHHHHHhC
Confidence 9999998877654431 0001100000 023578899999842 11100
Q ss_pred ---CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCc
Q 005365 523 ---SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 599 (700)
Q Consensus 523 ---p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~ 599 (700)
.++.....|+|++.+.||++.+++|+..+... +..++++|.|+.. +.+.++++++++ +++|.|+| .
T Consensus 301 l~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~~~lvivG~G~~~---~~~~l~~l~~~~--~~~V~~~g----~ 369 (489)
T PRK14098 301 LPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--DIQLVICGSGDKE---YEKRFQDFAEEH--PEQVSVQT----E 369 (489)
T ss_pred CCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--CcEEEEEeCCCHH---HHHHHHHHHHHC--CCCEEEEE----e
Confidence 11233567899999999999999999998753 6788888887643 346777888776 47899999 5
Q ss_pred CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc----CCeEEEECCCCHHHHHHHHHHH
Q 005365 600 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----GKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 600 v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d----g~~G~lv~p~D~eaLAeaI~~l 675 (700)
++.+++..+++. +|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|++++++|+++++++|.++
T Consensus 370 ~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~ 448 (489)
T PRK14098 370 FTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEA 448 (489)
T ss_pred cCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHH
Confidence 556788888986 99999999999999999999999999999999999999864 6799999999999999999987
Q ss_pred HHhccCCHHHHHHHHHHHH
Q 005365 676 FEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar 694 (700)
++ +..|++.|+++++++.
T Consensus 449 l~-~~~~~~~~~~~~~~~~ 466 (489)
T PRK14098 449 LA-LYHDEERWEELVLEAM 466 (489)
T ss_pred HH-HHcCHHHHHHHHHHHh
Confidence 63 2378999999988764
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=299.11 Aligned_cols=361 Identities=19% Similarity=0.214 Sum_probs=241.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+... +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~---~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPSH---CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCchh---cc--hhccCC
Confidence 79999976532 489999999 66677799999999 9986432110 00 011111
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHH--HHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIA--KELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~--~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t 434 (700)
.-.+++.+.+... .. .++. . .+..+.......+. .....++|+||+|....+... +....+.|++++
T Consensus 53 ~~~i~~~~~~~~~--~~----~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 TLPVRVRGDWLPR--SI----FGRF--H-ILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred eeEEEEEeEEEcc--hh----hHhH--H-HHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 0012222221110 00 0000 0 11111111111111 112348999999875544332 222334899999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
.|........... .++ ..++.. ....|+.+++.+|.|+++|...++.+.+.++... .....+++||++.
T Consensus 122 ~h~~~~~~~~~~~-~~~---~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~------~~~~~vi~n~vd~ 190 (392)
T cd03805 122 CHFPDQLLAQRGS-LLK---RLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLA------KNPREVVYPCVDT 190 (392)
T ss_pred EecChHHhcCCCc-HHH---HHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHhcccc------cCCcceeCCCcCH
Confidence 9943221100000 111 111111 1123778899999999999877665544433211 1112467888873
Q ss_pred CCCcce-----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcC---CCccEEEEecCChh---hHHHHHHH
Q 005365 515 FDPKFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD---VENKEHLKESKDLE---EQAEMKKM 577 (700)
Q Consensus 515 ~~~k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~---~~~~l~i~g~Gd~e---e~~~~~~l 577 (700)
..+. ..++.....+|.|+..+.||++.++++++.+.... ++..++++|.|+.. +..+.+++
T Consensus 191 --~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l 268 (392)
T cd03805 191 --DSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEEL 268 (392)
T ss_pred --HHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHH
Confidence 2221 12334445678899999999999999999998775 67888888877532 23456788
Q ss_pred HHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCe
Q 005365 578 YSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS 656 (700)
Q Consensus 578 ~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~ 656 (700)
++++++ +++.++|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.||..|++.++.+
T Consensus 269 ~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~ 343 (392)
T cd03805 269 QRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGET 343 (392)
T ss_pred HHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCc
Confidence 899999 99999999999 5667899999996 99999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 657 GYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 657 G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 344 g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 344 GFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred eEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999986 9999999999998 8999999999999998865
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=296.60 Aligned_cols=332 Identities=15% Similarity=0.219 Sum_probs=223.1
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHH---
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--- 392 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~--- 392 (700)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987643211 11 47788777553211 122233322211
Q ss_pred ---HHHHHHHH--HcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCC----chhhhhcccccchhhh
Q 005365 393 ---DVAVEIAK--ELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDS----DIYWKNLDDKYHFSCQ 462 (700)
Q Consensus 393 ---~~~~~l~~--~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~----~~~w~~~~~~y~~~~~ 462 (700)
.+.+.+.. ..+.+|||||+|...+. +..+.+. .++|+|...|.+........ ...... ....+...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSL-DDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCch-hHHHHHHHh
Confidence 12222222 22448999999975432 2334444 35888876653322111000 000000 000111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-------------cCCCCccc
Q 005365 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-------------VSPGADMS 529 (700)
Q Consensus 463 ~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-------------Ip~G~d~~ 529 (700)
.......++.+|.||++|...++.+.+.+. ..+.+|+||++. ..+.. ++++....
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~----------~ki~vI~ngvd~--~~f~~~~~~~~~~~~~~~~~~~~~~i 214 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPAELR----------SRISVIHDGIDT--DRLRPDPQARLRLPNGRVLTPGDEVI 214 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcHhhc----------cceEEeCCCccc--cccCCCchhhhcccccccCCCCCeEE
Confidence 111345789999999999877654333221 246788999984 22211 12233457
Q ss_pred cccCC-chhhhchhhHHHHHHHHhhcCCCccEEEEecCChh------hH-HHHHHHHHHHHHcC---CCCcEEEeccccC
Q 005365 530 IYFPY-TEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLE------EQ-AEMKKMYSLIDQYK---LNGQFRWISSQMN 598 (700)
Q Consensus 530 ~F~g~-~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~e------e~-~~~~~l~~li~~l~---L~~~V~flG~~~d 598 (700)
+|.|+ +.+.||++.+++|+..+....++..++++|.+... .. .+.+. ++++++ ..++|.|+|
T Consensus 215 ~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~V~f~G---- 287 (396)
T cd03818 215 TFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLDLSRVHFLG---- 287 (396)
T ss_pred EEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccCcceEEEeC----
Confidence 78997 89999999999999999887788888888864210 00 12222 233333 247899999
Q ss_pred cCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 599 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 599 ~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
.++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..|++.++.+|++++++|++++|++|.+++
T Consensus 288 ~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll-- 364 (396)
T cd03818 288 RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELL-- 364 (396)
T ss_pred CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHH--
Confidence 6667899999996 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 005365 679 CKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|++.+.+|+++|++++.+
T Consensus 365 --~~~~~~~~l~~~ar~~~~~ 383 (396)
T cd03818 365 --DDPARRARLRRAARRTALR 383 (396)
T ss_pred --hCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999875
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=301.10 Aligned_cols=387 Identities=16% Similarity=0.150 Sum_probs=241.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV 354 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i 354 (700)
.|||+++|....|- ..+||..-.+- .|.++|+++||+|. |+++.+..-...... .....+
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999988764 57899887777 55667799999999 999876443110000 001111
Q ss_pred cC--ccceEEEEecCCCccc-cc--cccccccc-ch------h------hHHHHHHHHHHHHHHH-cCCCCeEEEEcCCC
Q 005365 355 YG--TKYSDILRVPFRTEKG-VV--RKWISRFE-VW------P------YLETYTEDVAVEIAKE-LQGKPDLIIGNYSD 415 (700)
Q Consensus 355 ~~--~~~v~I~rvp~~~~~~-~~--~~~lsr~~-i~------~------~l~~f~~~~~~~l~~~-~~~~pDlIh~h~~~ 415 (700)
.. ...+++......+-.- ++ ..+..|.. ++ + .+..|...++..+... ...+|||||+|.|.
T Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~ 143 (485)
T PRK14099 64 PDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQ 143 (485)
T ss_pred eeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcH
Confidence 10 0011222111110000 00 01111111 11 1 1122333333322221 13589999999999
Q ss_pred chHHHHHHHH--hcCCcEEEEecCCccccCCCC------chhhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHh
Q 005365 416 GNIVASLLAH--KLGVTQCTIAHALEKTKYPDS------DIYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 416 ~~lva~lla~--~~giP~V~t~H~l~~~~~~~~------~~~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~ 486 (700)
+++++.++.. ..++|+|+|+|++........ +..+..+. ....+.......+.+++.||.|+|+|+..++.
T Consensus 144 ~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 144 AGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 9998877753 246899999999854321110 00111100 00000011112556789999999999877665
Q ss_pred hhhhhccccc--cccccCCCeEEeecCCCCC--CCcce-e-------------------------cC--CCCccccccCC
Q 005365 487 SKDTVGQYES--HTAFTLPGLYRVVHGIDVF--DPKFN-I-------------------------VS--PGADMSIYFPY 534 (700)
Q Consensus 487 ~k~~~~~y~~--~~~~~~p~l~~v~nGId~~--~~k~~-v-------------------------Ip--~G~d~~~F~g~ 534 (700)
+++...-+.- ........+..|+||||.. .+... . ++ +......|+||
T Consensus 224 i~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgR 303 (485)
T PRK14099 224 IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISR 303 (485)
T ss_pred HhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEec
Confidence 4432110000 0001123578899999842 11100 0 11 12234457899
Q ss_pred chhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcE-EEeccccCcCChhHHHHHHHccC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQF-RWISSQMNRVRNGELYRYICDTK 613 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V-~flG~~~d~v~~~el~~~la~~a 613 (700)
+.++||++.+++|+..+... +..++++|.|+.+ ..+.+++++++++ +++ .|+|+ .+++..+|..++
T Consensus 304 L~~~KG~d~Li~A~~~l~~~--~~~lvivG~G~~~---~~~~l~~l~~~~~--~~v~~~~G~------~~~l~~~~~a~a 370 (485)
T PRK14099 304 LSWQKGLDLLLEALPTLLGE--GAQLALLGSGDAE---LEARFRAAAQAYP--GQIGVVIGY------DEALAHLIQAGA 370 (485)
T ss_pred CCccccHHHHHHHHHHHHhc--CcEEEEEecCCHH---HHHHHHHHHHHCC--CCEEEEeCC------CHHHHHHHHhcC
Confidence 99999999999999988753 5788888888653 3356677777664 455 78884 367888775349
Q ss_pred cEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 614 GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 614 DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
|+||+||++|+||++++|||+||+|+|+|++||++|+|.++ .+|++++|+|+++++++|.+++. +.+|++
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~-l~~d~~ 449 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAA-LFADPV 449 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHH-HhcCHH
Confidence 99999999999999999999999999999999999999876 68999999999999999997431 127999
Q ss_pred HHHHHHHHHHH
Q 005365 685 YWDKISLGGLK 695 (700)
Q Consensus 685 ~~~~ms~~ar~ 695 (700)
.|++|+++|++
T Consensus 450 ~~~~l~~~~~~ 460 (485)
T PRK14099 450 AWRRLQRNGMT 460 (485)
T ss_pred HHHHHHHHhhh
Confidence 99999999863
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=289.32 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=207.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||+|....+..+..++++.|+|++++.|+........ +.... .+... ...++..++.+|.|+++|...+
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~-~~~~~--~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRS-RWALY--ARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhccc-chhHH--HHHHHHHHHhcCEEEECCHHHH
Confidence 89999999877778888888999999999999754322111 10000 01111 1235567899999999997665
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEE
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i 562 (700)
+.+.+. .+....+.+++||++. .++.. ........+|.|+..+.||.+.+++++..+....++..+++
T Consensus 155 ~~~~~~--------~~~~~~i~vi~~g~d~--~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i 224 (367)
T cd05844 155 DRLLAL--------GFPPEKVHVHPIGVDT--AKFTPATPARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVI 224 (367)
T ss_pred HHHHHc--------CCCHHHeEEecCCCCH--HhcCCCCCCCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEE
Confidence 433321 1222346778889873 22221 11223356789999999999999999999987777788888
Q ss_pred EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC------CCCccHHHHHHHHcC
Q 005365 563 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCG 636 (700)
Q Consensus 563 ~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~------~E~fGl~vlEAMA~G 636 (700)
+|.|+ +.++++++++++++.++|+|+| .++.+++..+++. +|++|+||. .|+||++++|||+||
T Consensus 225 vG~g~-----~~~~~~~~~~~~~~~~~v~~~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G 294 (367)
T cd05844 225 IGDGP-----LLAALEALARALGLGGRVTFLG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASG 294 (367)
T ss_pred EeCch-----HHHHHHHHHHHcCCCCeEEECC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcC
Confidence 87652 3356788889999999999999 5667899999997 999999997 599999999999999
Q ss_pred CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 637 LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 637 lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+|+.+|++++.+
T Consensus 295 ~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 353 (367)
T cd05844 295 VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLL----ADPDLRARMGAAGRRRVEE 353 (367)
T ss_pred CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 8999999999999998864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=285.74 Aligned_cols=327 Identities=17% Similarity=0.173 Sum_probs=241.7
Q ss_pred CcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccc
Q 005365 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (700)
Q Consensus 298 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ 377 (700)
..||.++++. +|+++|+++||+|. |+|...+.. ...+ ..++.+++++......
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AELE----AEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHHH----hcCCeEEEccccccch-----
Confidence 3499999999 67777799999999 887532111 1111 1135566665543211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccccc
Q 005365 378 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457 (700)
Q Consensus 378 lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y 457 (700)
+..+ .+...+.+.+.+. +||+||+|.....+.+.++++..++|++++.|+......
T Consensus 61 ------~~~~-~~~~~l~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRIL-LNVARLRRLIREE---KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhH-HHHHHHHHHHHHc---CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 1111 1222334444443 899999998777777888888889999999998643220
Q ss_pred chhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc-cee-------------cC
Q 005365 458 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK-FNI-------------VS 523 (700)
Q Consensus 458 ~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k-~~v-------------Ip 523 (700)
.....++.+|.++++|....+.+++.++ +.......++||++..... ... .+
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~~~~-------~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRENYG-------VDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLP 182 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHHhcC-------CChhhEEEecCCccccccCccccchHHHHHHHHHcCCC
Confidence 0123467899999999777654443222 1123467788998742111 000 12
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChh
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 603 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~ 603 (700)
+.....+|.|++.+.||++.+++++..+....++..++++|.++... ...+.+.+.++++++.++|.|+|+ .+
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~g~------~~ 255 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRR-FYYAELLELIKRLGLQDRVTFVGH------CS 255 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccc-hHHHHHHHHHHHcCCcceEEEcCC------cc
Confidence 33445778999999999999999999998776678888888876532 344666778888999999999995 35
Q ss_pred HHHHHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 604 ELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 604 el~~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|..++. .+
T Consensus 256 ~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~ 331 (355)
T cd03819 256 DMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILS---LL 331 (355)
T ss_pred cHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hC
Confidence 78899996 99999999 899999999999999999999999999999999999999999999999999976652 68
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 005365 683 PSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~e~ 700 (700)
++.+.+++++|++.+.++
T Consensus 332 ~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 332 PEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=291.63 Aligned_cols=342 Identities=16% Similarity=0.179 Sum_probs=243.2
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|+-||++++..-+|.|. ...||+++++. +++++|+. +|+ |+|...+.-. ..|.
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~~- 53 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYTK- 53 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chhh-
Confidence 67899999998888764 34699999999 56656643 999 9998765311 1111
Q ss_pred cCccceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 355 YGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~-~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
..+++.++++++....+ ...+|.+- .-. .|...+...+......++||||.|... .+...+..+..+.|++.
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 54 -VNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred -ccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 11256777776654321 11222221 112 233334444433323479999998744 34444455556789999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+.+.. ..++.++.||++|...++.+.+.+ ......+++||++
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~~~---------~~~~i~vIpngvd 171 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEERL---------PNADISIVPNGFC 171 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHhhC---------CCCCEEEecCCCC
Confidence 99964210 124468999999977655433321 1224678889998
Q ss_pred CCCCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh----hhHHHHHHHH
Q 005365 514 VFDPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL----EEQAEMKKMY 578 (700)
Q Consensus 514 ~~~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~----ee~~~~~~l~ 578 (700)
.. .+.. ++++....+|.|++.+.||++.+++|+..+....++..++++|.|.. +...+.++++
T Consensus 172 ~~--~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~ 249 (380)
T PRK15484 172 LE--TYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249 (380)
T ss_pred HH--HcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHH
Confidence 42 1110 12234457789999999999999999999988888888999987643 2234555677
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-CCccHHHHHHHHcCCCEEEcCCCCcccccccCCeE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSG 657 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G 657 (700)
+++++++ .+|.|+| .++.+++..+|+. +|++|+||.+ |+||++++||||||+|||+|+.||++|++.++.+|
T Consensus 250 ~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G 322 (380)
T PRK15484 250 EAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITG 322 (380)
T ss_pred HHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCce
Confidence 7776665 5799999 5567899999997 9999999975 99999999999999999999999999999999999
Q ss_pred E-EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 658 Y-HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 658 ~-lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ +++|.|++++|++|..++ +|++. .+|+++|++.+.+
T Consensus 323 ~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~ 360 (380)
T PRK15484 323 YHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFS 360 (380)
T ss_pred EEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHH
Confidence 9 568899999999999998 88885 7899999988754
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=289.10 Aligned_cols=335 Identities=15% Similarity=0.170 Sum_probs=234.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++..+. +.||.+.++. +|++.|.+.|+++. |++....+. ...... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~~----~~~~~~----~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVSA----FRKRIQ----R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCCh----hHHHHH----h
Confidence 677776543 3599999999 56666688999988 776322111 111111 1
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~-V~t~H 436 (700)
.++.+++++..... .+ .+...+.+.+.+. +||+||+|...+ ..+..+++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~~-----------~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPGK-----------DV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCCC-----------Ch----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 24667766543210 01 1123345555555 899999987543 34455666777775 45556
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+...... ....|. +.+ .++...+.+|.++++|....+.+.+.++ .....+..++||++.
T Consensus 113 ~~~~~~~--~~~~~~-----~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~~~-------~~~~~~~vi~ngvd~-- 171 (374)
T TIGR03088 113 GRDVFDL--DGSNWK-----YRW-----LRRLYRPLIHHYVAVSRDLEDWLRGPVK-------VPPAKIHQIYNGVDT-- 171 (374)
T ss_pred Ccccccc--hhhHHH-----HHH-----HHHHHHhcCCeEEEeCHHHHHHHHHhcC-------CChhhEEEeccCccc--
Confidence 4322111 011111 111 1334556789999999877665444332 112346789999984
Q ss_pred Cccee-------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC----CccEEEEecCChhhHHHHHHHHH
Q 005365 517 PKFNI-------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV----ENKEHLKESKDLEEQAEMKKMYS 579 (700)
Q Consensus 517 ~k~~v-------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~----~~~l~i~g~Gd~ee~~~~~~l~~ 579 (700)
..+.. .+......+|.|++.+.||+..+++++..+....+ +..++++|.| +. .+.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g--~~---~~~~~~ 246 (374)
T TIGR03088 172 ERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PA---RGACEQ 246 (374)
T ss_pred cccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCC--ch---HHHHHH
Confidence 22211 11223356789999999999999999999887654 3456666654 32 356788
Q ss_pred HHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEE
Q 005365 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYH 659 (700)
Q Consensus 580 li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~l 659 (700)
.++++++.+++.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++
T Consensus 247 ~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~ 319 (374)
T TIGR03088 247 MVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGAL 319 (374)
T ss_pred HHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEE
Confidence 88899999999999943 457888886 99999999999999999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 660 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 660 v~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++|++++|++|.+++ +|++.+.+++++|++++.+
T Consensus 320 ~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~ 355 (374)
T TIGR03088 320 VPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQ 355 (374)
T ss_pred eCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999999999998864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=280.81 Aligned_cols=339 Identities=14% Similarity=0.119 Sum_probs=233.6
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+|++.+++| |..||++.++. +++++|.++||+|+ |+|........ . ...
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~------~---~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK------E---TEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc------c---ccc
Confidence 69999998886 34699999999 67777799999999 99865432210 0 111
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.+++++++|.....+. .. .... ...+.+.+. ...++|+||...... ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~~--------~~--~~~~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGGL--------GT--IIYD-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccch--------hh--hHHH-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 3577887776532110 00 0000 011111111 123566666654444 33444556669999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
..... ..|.... ..+ ....++.+++.+|.|+++|....+.+++.++. +. ..++||++....
T Consensus 118 ~~~~~-----~~~~~~~--~~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~---------~~-~~i~ngv~~~~~ 178 (363)
T cd04955 118 LEWKR-----AKWGRPA--KRY--LKFGEKLAVKFADRLIADSPGIKEYLKEKYGR---------DS-TYIPYGADHVVS 178 (363)
T ss_pred cceee-----cccccch--hHH--HHHHHHHHHhhccEEEeCCHHHHHHHHHhcCC---------CC-eeeCCCcChhhc
Confidence 74332 1222111 111 12236678899999999997776655443331 22 678899984321
Q ss_pred cc--ee---c-CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH-HcCCCCcE
Q 005365 518 KF--NI---V-SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID-QYKLNGQF 590 (700)
Q Consensus 518 k~--~v---I-p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~-~l~L~~~V 590 (700)
.. .. . .......+|+|+..+.||++.+++++..+.. +..++++|.|+... .+.+.++ .+++.++|
T Consensus 179 ~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~~-----~~~~~~~~~~~~~~~V 250 (363)
T cd04955 179 SEEDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS---GKKLVIVGNADHNT-----PYGKLLKEKAAADPRI 250 (363)
T ss_pred chhhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc---CceEEEEcCCCCcc-----hHHHHHHHHhCCCCcE
Confidence 11 00 0 1122356799999999999999999988753 67788888774332 2223333 56788899
Q ss_pred EEeccccCcCChhHHHHHHHccCcEEEeCCCC-CCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 591 RWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
+|+| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|++++++|+ ++
T Consensus 251 ~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~ 321 (363)
T cd04955 251 IFVG----PIYDQELLELLRY-AALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LA 321 (363)
T ss_pred EEcc----ccChHHHHHHHHh-CCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HH
Confidence 9999 5667899999997 9999999998 9999999999999999999999999999966 7999988776 99
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|..++ +|++.+.+++++|++++.+
T Consensus 322 ~~i~~l~----~~~~~~~~~~~~~~~~~~~ 347 (363)
T cd04955 322 SLLEELE----ADPEEVSAMAKAARERIRE 347 (363)
T ss_pred HHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-30 Score=277.19 Aligned_cols=339 Identities=17% Similarity=0.194 Sum_probs=238.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.++ |+.||.+.++. +|+++|.++||+|+ |++......... ...
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hhc---
Confidence 6899987665 44699999999 77777899999999 887653322110 111
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.+..+.+++...... ..+... .....+. ....+||+||.|+..............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNVA----------STPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccccc----------cccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 133455554322100 000000 1111111 2234899999988655433333333368899999996
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
...... .. +.+... .++..++.||.|+++|....+.+..... + . .....++||++....
T Consensus 116 ~~~~~~----~~-------~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~-~------~-~~~~~i~~gi~~~~~ 174 (357)
T cd03795 116 DIVKQK----LL-------LKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRR-F------R-DKVRVIPLGLDPARY 174 (357)
T ss_pred hhhccc----hh-------hhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcC-C------c-cceEEecCCCChhhc
Confidence 422110 00 111111 2456789999999999776543332221 1 1 346778899984211
Q ss_pred cce--------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 KFN--------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k~~--------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... ..+......+|.|+..+.||++.+++++.++. +..++++|.|+. ...+.+.++++++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~----~~~l~i~G~g~~-----~~~~~~~~~~~~~~~~ 245 (357)
T cd03795 175 PRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP----DAPLVIVGEGPL-----EAELEALAAALGLLDR 245 (357)
T ss_pred CCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc----CcEEEEEeCChh-----HHHHHHHHHhcCCcce
Confidence 110 12334456789999999999999999999875 677888887632 3567778888899999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc-CCeEEEECCCCHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN-GKSGYHIDPYHGE 666 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d-g~~G~lv~p~D~e 666 (700)
|.|+| .++.+++..+++. ||++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|++
T Consensus 246 V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~ 320 (357)
T cd03795 246 VRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPA 320 (357)
T ss_pred EEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHH
Confidence 99999 6667899999996 999999996 59999999999999999999999999999986 8999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+++++|.+++ +|++.+++|+++|++++.++
T Consensus 321 ~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~ 350 (357)
T cd03795 321 ALAEAIRRLL----EDPELRERLGEAARERAEEE 350 (357)
T ss_pred HHHHHHHHHH----HCHHHHHHHHHHHHHHHHHh
Confidence 9999999998 89999999999999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.8e-30 Score=284.08 Aligned_cols=361 Identities=13% Similarity=0.069 Sum_probs=237.2
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcc-----
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEK----- 371 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~----- 371 (700)
-..||.++.+..+|-++.+...+.=+-.|+.|..+|-++|++.....+.++-...-.-...++..+-+++..-+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 346999999998887665554444444577787788899998766655544211111122233444444421111
Q ss_pred -cccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE-ecCCccccCCCCchh
Q 005365 372 -GVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI-AHALEKTKYPDSDIY 449 (700)
Q Consensus 372 -~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t-~H~l~~~~~~~~~~~ 449 (700)
+.++.+++. +.|..-.-...+...+++. +||+||+|...+++.+.++++..|+|++++ .|+..... ...
T Consensus 251 ~~~~~~~~~~--~~~~~~~~~~~l~~~ir~~---rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~----~~r 321 (578)
T PRK15490 251 SPELRLLLSH--LPPVCKYGIKHLVPHLCER---KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV----RKR 321 (578)
T ss_pred chHHHHHHhc--CChHHHHHHHHHHHHHHHc---CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc----hhh
Confidence 112222211 1111112223344555555 999999999888888888898899999654 66521111 000
Q ss_pred hhhcccccchhhhhhHHHHHHhhCCE------EEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee--
Q 005365 450 WKNLDDKYHFSCQFTADLIAMNHTDF------IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-- 521 (700)
Q Consensus 450 w~~~~~~y~~~~~~~~E~~al~~AD~------IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-- 521 (700)
+ +..|...+..++. +++.|....+.+.+.++ +....+.+|+||++.. .+..
T Consensus 322 ~------------~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~l~~~lg-------ip~~KI~VIyNGVD~~--rf~p~~ 380 (578)
T PRK15490 322 L------------FKPEYEPLYQALAVVPGVDFMSNNHCVTRHYADWLK-------LEAKHFQVVYNGVLPP--STEPSS 380 (578)
T ss_pred H------------HHHHHHHhhhhceeEecchhhhccHHHHHHHHHHhC-------CCHHHEEEEeCCcchh--hcCccc
Confidence 0 0011122333333 44455333332222222 2223478899999842 1111
Q ss_pred -------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCC
Q 005365 522 -------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNG 588 (700)
Q Consensus 522 -------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~ 588 (700)
+++......+++++.+.|+...+++++..+....++..++++|.| ++.++++++++++++.+
T Consensus 381 ~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG-----~~~eeLk~la~elgL~d 455 (578)
T PRK15490 381 EVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDG-----DLRAEAQKRAEQLGILE 455 (578)
T ss_pred hhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCc-----hhHHHHHHHHHHcCCCC
Confidence 122223455788999999999999999988877777778888765 23467888999999999
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHH
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaL 668 (700)
+|+|+|++ +++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||.+|+|.+|.+|++++++|++++
T Consensus 456 ~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aL 528 (578)
T PRK15490 456 RILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNL 528 (578)
T ss_pred cEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhH
Confidence 99999953 467888886 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
++++..+. ++..+...+..|+++|+++++++
T Consensus 529 a~ai~lA~-aL~~ll~~~~~mg~~ARe~V~e~ 559 (578)
T PRK15490 529 DQACRYAE-KLVNLWRSRTGICQQTQSFLQER 559 (578)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 88774321 12245556678999999998753
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-30 Score=273.34 Aligned_cols=256 Identities=20% Similarity=0.258 Sum_probs=203.3
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.+||+||+|+... ...+.+.++..++|++++.|+......... ..++..++.+|.++++|..
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCHH
Confidence 3899999998644 445555555568999999997532211000 1245678899999999987
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.++.+++.++ .......+++||++. ..+.. ........+|+|+..+.||++.+++++..+....++.
T Consensus 141 ~~~~l~~~~~-------~~~~~~~vi~~~~d~--~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~ 211 (355)
T cd03799 141 NRQQLIRLLG-------CDPDKIHVVHCGVDL--ERFPPRPPPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDF 211 (355)
T ss_pred HHHHHHHhcC-------CCcccEEEEeCCcCH--HHcCCccccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCe
Confidence 7765554432 122357788999973 22221 1223335678899999999999999999988776677
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC------CCccHHHHHH
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEA 632 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~------E~fGl~vlEA 632 (700)
.++++|.++. ...+.+.++++++.++|+|+| .++.+++..+++. +|++++||.. |+||++++||
T Consensus 212 ~l~i~G~~~~-----~~~~~~~~~~~~~~~~v~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea 281 (355)
T cd03799 212 RLDIVGDGPL-----RDELEALIAELGLEDRVTLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEA 281 (355)
T ss_pred EEEEEECCcc-----HHHHHHHHHHcCCCCeEEECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHH
Confidence 8888887743 356778888889999999999 5667899999997 9999999998 9999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++++
T Consensus 282 ~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~ 344 (355)
T cd03799 282 MAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLL----DDPELRREMGEAGRARVEE 344 (355)
T ss_pred HHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 8999999999999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=271.42 Aligned_cols=351 Identities=15% Similarity=0.131 Sum_probs=239.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++++.+ |..||.+.++. +|++.|+++||+|+ |+|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6889987664 45699999999 67777799999999 887653321100 0000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC--CchHHHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS--DGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~--~~~lva~lla~~~giP~V~t~ 435 (700)
............ ... .... ..+.......+ .....+||+||.|.. .....+...++..++|++++.
T Consensus 52 -~~~~~~~~~~~~--~~~-----~~~~---~~~~~~~~~~~-~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINVA--YGL-----NLAR---YLFPPSLLAWL-RLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccchh--hhh-----hhhh---hccChhHHHHH-HHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 000 0000 00001111111 122348999999873 334456666777899999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+....... ....+. .....+..+...++.++.++++|........... .......++||++..
T Consensus 120 ~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~---------~~~~~~vi~~~~~~~ 183 (375)
T cd03821 120 HGMLDPWAL-PHKALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG---------LKAPIAVIPNGVDIP 183 (375)
T ss_pred ccccccccc-ccchhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC---------CcccEEEcCCCcChh
Confidence 986433211 011111 1111223356778899999999966654322211 123467788998842
Q ss_pred CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 516 DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 516 ~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
..... ..++.....+|.|+..+.||++.+++++..+....++..++++|.++... ...++.+++++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~---~~~~~~~~~~~~~ 260 (375)
T cd03821 184 PFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGY---RAELKQIAAALGL 260 (375)
T ss_pred ccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcch---HHHHHHHHHhcCc
Confidence 21111 12344556789999999999999999999998877788899998876543 2445556688899
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|.|+| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.+ .+|+++++ +++
T Consensus 261 ~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 261 EDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred cceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 99999999 5566899999997 99999999999999999999999999999999999999998 78998876 559
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|.+++ +|++.+++++++|++.+.+
T Consensus 334 ~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 362 (375)
T cd03821 334 ALAAALRRAL----ELPQRLKAMGENGRALVEE 362 (375)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999999998 8999999999999998654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=278.25 Aligned_cols=335 Identities=14% Similarity=0.125 Sum_probs=236.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.. ..||.+.++. +++++|++.||+|+ +++...... ....... .
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~~----~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEIE----K 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHHH----H
Confidence 688887543 2499999999 56666688999999 888653221 0111111 1
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~-V~t~H 436 (700)
.++.+++++.... ..+ .+...+.+.+.+ .+||+||+|......++..+++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIKK---NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHhc---CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 1455665543321 111 122223333333 3899999998777667777777777775 55677
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
........... .... ...+...++.+|.++++|....+.+... .....+.+++||++...
T Consensus 113 ~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------~~~~~~~vi~ngvd~~~ 172 (358)
T cd03812 113 NTSDSHDKKKK--------ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---------VKNKKFKVIPNGIDLEK 172 (358)
T ss_pred cccccccccch--------hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------CCcccEEEEeccCcHHH
Confidence 65433211100 0000 1124567888999999997766543322 12234778899998421
Q ss_pred Ccce----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 517 PKFN----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 517 ~k~~----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
.... -...+....+|.|++.+.||++.+++++..+....++..++++|.|+. .+.+++.++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~-----~~~~~~~~~~~~~ 247 (358)
T cd03812 173 FIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL-----EEEIKKKVKELGL 247 (358)
T ss_pred cCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch-----HHHHHHHHHhcCC
Confidence 1110 022344457799999999999999999999988888888888887743 3567778888999
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|.|+|+ .+++..+++. ||++|+||.+|+||++++||||||+|||+|+.||.+|++.+ ..|++..+++++
T Consensus 248 ~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~ 319 (358)
T cd03812 248 EDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPE 319 (358)
T ss_pred CCcEEEecc------cCCHHHHHHh-cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHH
Confidence 999999995 3467888886 99999999999999999999999999999999999999998 467777777899
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
++|++|.+++ +||+.+++++..+....
T Consensus 320 ~~a~~i~~l~----~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 320 IWAEEILKLK----SEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHHHH----hCcchhhhhhhhhhccc
Confidence 9999999998 89999998888776543
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=285.15 Aligned_cols=353 Identities=12% Similarity=0.023 Sum_probs=233.5
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
|...||++++... +|.+..+. +++++|+++||+|+ |+|...+... . .
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~----~----~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH----D----E 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC----H----H
Confidence 3446888887522 45566667 67778899999999 9986532210 0 0
Q ss_pred ecCccceEEEEecCCC-cccccccccccccchhhHHHHHH---HHHHHHHHHcCCCCeEEEEcCCCc---hHHHHHHHHh
Q 005365 354 VYGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTE---DVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHK 426 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~-~~~~~~~~lsr~~i~~~l~~f~~---~~~~~l~~~~~~~pDlIh~h~~~~---~lva~lla~~ 426 (700)
.....++.+++++... ..+. ...+..+...... .+.+.+.. ..+||+||+|.... ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 0112357777776653 1110 0111112211111 12222222 23799999976433 3456666777
Q ss_pred cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeE
Q 005365 427 LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506 (700)
Q Consensus 427 ~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~ 506 (700)
.++|+|++.|+.+...... . .+ ......++..+ .|+..++.||.||++|....+.+.+ .+ .....+.
T Consensus 120 ~~~~~V~~~h~~~~~~~~~-~-~~-~~~~~~~~~~~--~e~~~~~~ad~ii~vS~~~~~~l~~-~~-------~~~~ki~ 186 (415)
T cd03816 120 RRTKLIIDWHNYGYTILAL-K-LG-ENHPLVRLAKW--YEKLFGRLADYNLCVTKAMKEDLQQ-FN-------NWKIRAT 186 (415)
T ss_pred hCCeEEEEcCCchHHHHhc-c-cC-CCCHHHHHHHH--HHHHHhhcCCEeeecCHHHHHHHHh-hh-------ccCCCee
Confidence 8999999999864321100 0 00 00111122222 3778899999999999776654433 22 1123456
Q ss_pred EeecCCCCCCCcceec-----------------------------CCCCccccccCCchhhhchhhHHHHHHHHhhc---
Q 005365 507 RVVHGIDVFDPKFNIV-----------------------------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYS--- 554 (700)
Q Consensus 507 ~v~nGId~~~~k~~vI-----------------------------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~--- 554 (700)
+|+||.+ ..+..+ ++.....++.|++.+.||++.+++|+..+...
T Consensus 187 vI~Ng~~---~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~ 263 (415)
T cd03816 187 VLYDRPP---EQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT 263 (415)
T ss_pred ecCCCCH---HHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc
Confidence 6777732 111110 11122345678999999999999999998753
Q ss_pred ---CCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCC---CCCCccHH
Q 005365 555 ---DVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLT 628 (700)
Q Consensus 555 ---~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS---~~E~fGl~ 628 (700)
.++..++++|.|. ..++++++++++++.+.+.+.| +++.+++..+|+. +|++|.|+ ..|+||++
T Consensus 264 ~~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~-aDv~v~~~~~~~~~~~p~~ 333 (415)
T cd03816 264 GPKLPKLLCIITGKGP-----LKEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS-ADLGVSLHTSSSGLDLPMK 333 (415)
T ss_pred cccCCCEEEEEEecCc-----cHHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh-CCEEEEccccccccCCcHH
Confidence 2456677777663 2367888889999976455556 5567999999997 99999753 34789999
Q ss_pred HHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC---HHHHHHHHHHHHHHHHh
Q 005365 629 VVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD---PSYWDKISLGGLKRIEE 699 (700)
Q Consensus 629 vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d---p~~~~~ms~~ar~ra~e 699 (700)
++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.+++|+++|++++++
T Consensus 334 ~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 334 VVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999994 9999999999998 67 99999999999998764
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=281.82 Aligned_cols=331 Identities=14% Similarity=0.168 Sum_probs=220.2
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHC--CCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|||+++++. + +..||+++++. +++++|.++ ||+|. ++++..+... . .....
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~--~---~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK--A---WLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh--H---HHHhc
Confidence 899999754 3 34599999999 666667999 77777 7776433110 0 00000
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc--EE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT--QC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP--~V 432 (700)
.-.......++++. ... .....+.+.+++. +||+||+|.....+.+..+++..++| ++
T Consensus 54 ~~~~~~~~~~~~~~----------~~~-------~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RRA-------KHVYNFSKWLKET---QPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------ccc-------HHHHHHHHHHHhc---CCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 000 1112334445444 89999999866666677677766665 45
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
.+.|...... + .+ +...+..+|.++++|....+.+.+. + .....+.+++||+
T Consensus 114 ~~~h~~~~~~-------~-----~~--------~~~~~~~~d~~i~~S~~~~~~~~~~-~-------~~~~ki~vi~N~i 165 (359)
T PRK09922 114 SWPHFSLDHK-------K-----HA--------ECKKITCADYHLAISSGIKEQMMAR-G-------ISAQRISVIYNPV 165 (359)
T ss_pred EEecCccccc-------c-----hh--------hhhhhhcCCEEEEcCHHHHHHHHHc-C-------CCHHHEEEEcCCC
Confidence 5556421110 0 00 0012367999999997765543321 1 1123467889999
Q ss_pred CCCCCccee-cC--CCCccccccCCch--hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC
Q 005365 513 DVFDPKFNI-VS--PGADMSIYFPYTE--EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 513 d~~~~k~~v-Ip--~G~d~~~F~g~~~--~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~ 587 (700)
+. +.+.. .+ ......+|+|++. +.||+..+++++..+. ++..++++|.|. + .+.++++++++++.
T Consensus 166 d~--~~~~~~~~~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~--~---~~~l~~~~~~~~l~ 235 (359)
T PRK09922 166 EI--KTIIIPPPERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGS--D---FEKCKAYSRELGIE 235 (359)
T ss_pred CH--HHccCCCcccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCc--c---HHHHHHHHHHcCCC
Confidence 73 21111 11 1123467889875 4599999999988763 256677777663 2 35678889999999
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHH
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
++|.|+|++.+ +.+++..+|+. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.+|.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999997653 24778888886 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHH--HHHHHHHHHHHHHHh
Q 005365 667 QAAEILVDFFEKCKADPS--YWDKISLGGLKRIEE 699 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~--~~~~ms~~ar~ra~e 699 (700)
++|++|.+++ +|++ ....+++++++...+
T Consensus 313 ~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKYQHDAIPNSIERFYEV 343 (359)
T ss_pred HHHHHHHHHH----hCcccCCHHHHHHHHHHhhHH
Confidence 9999999998 7776 355666666665543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=294.48 Aligned_cols=428 Identities=12% Similarity=0.110 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCchHH-------HHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCccchhhhhcCC
Q 005365 201 LNSLQHVLRKAEEYLTTVVPETPFSEL-------ALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRI 273 (700)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 273 (700)
.+.=..++++|.+..+.=. .-|.+. ..-+|.+|=|----++--|+.-+-+++...-+- .+...+..-
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRR-RNAEYDAGP--- 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhc-CcccccCCC---
Confidence 4444556666655544332 122221 224677777765556667777777777654421 111111100
Q ss_pred Ccce-EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCC------------ceeeccEEEeccCC
Q 005365 274 PMVF-NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGL------------DITPQILIITRLLP 340 (700)
Q Consensus 274 pm~m-kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~i~VvT~~~p 340 (700)
-.+. ||+++.+.. ..||.|++++ .|+.+|.++|. ++. |++....
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~----V~~~~~~ 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ----VVCRSLR 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE----EEEEecc
Confidence 0124 788886443 3599999999 55555677744 234 4332111
Q ss_pred CCCCC-CCccceeEecCccceEEEEecCCCccccc--cccccc-----ccchhhHHHHHHHHHHHHHHHcCCCCeEEEEc
Q 005365 341 DAVGT-TCGQRLEKVYGTKYSDILRVPFRTEKGVV--RKWISR-----FEVWPYLETYTEDVAVEIAKELQGKPDLIIGN 412 (700)
Q Consensus 341 ~~~~~-~~~~~~e~i~~~~~v~I~rvp~~~~~~~~--~~~lsr-----~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h 412 (700)
...++ .+...++ ..++.+..++.....+.. ..++.. ..+-.........+.+.+++. +|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~---kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSS---VPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHc---CCcEEEEe
Confidence 11111 1111111 124555555443321100 000000 000011122334455555554 89999999
Q ss_pred CCCchHHHHHHHHhcCCcEEE-EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhh
Q 005365 413 YSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 491 (700)
Q Consensus 413 ~~~~~lva~lla~~~giP~V~-t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~ 491 (700)
....++++.++++..++|+|+ +.|+....... ..|+ ..|.... ..+....++.+|++|....+.+.+.+
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~---~~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~~~ 477 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP---DRYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYADWL 477 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch---hHHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHHHc
Confidence 999888888888889999876 55764322111 0111 0111111 11112234566666755543333222
Q ss_pred ccccccccccCCCeEEeecCCCCCCCcce-------------e-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 492 GQYESHTAFTLPGLYRVVHGIDVFDPKFN-------------I-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 492 ~~y~~~~~~~~p~l~~v~nGId~~~~k~~-------------v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
+ +....+.+|+|||+.. ++. . .+.+.....++|++.+.||.+.+++|+..+....++
T Consensus 478 g-------~~~~kI~VI~NGVd~~--~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~ 548 (694)
T PRK15179 478 G-------VDERRIPVVYNGLAPL--KSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPK 548 (694)
T ss_pred C-------CChhHEEEECCCcCHH--hcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcC
Confidence 2 1223477899999842 111 0 122233556889999999999999999999888788
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 637 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl 637 (700)
..++|+|.|. ..++++++++++++.++|.|+|++. ++..+|+. +|+||+||.+|+||++++|||+||+
T Consensus 549 ~~LvIvG~G~-----~~~~L~~l~~~lgL~~~V~flG~~~------dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~ 616 (694)
T PRK15179 549 VRFIMVGGGP-----LLESVREFAQRLGMGERILFTGLSR------RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGV 616 (694)
T ss_pred eEEEEEccCc-----chHHHHHHHHHcCCCCcEEEcCCcc------hHHHHHHh-cCEEEeccccccchHHHHHHHHcCC
Confidence 8888888763 2367889999999999999999643 56778886 9999999999999999999999999
Q ss_pred CEEEcCCCCcccccccCCeEEEECCCCH--HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 638 PTFATCKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 638 PVVAT~~GG~~EiI~dg~~G~lv~p~D~--eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|||+|+.||++|+|.++.+|++++++|+ ++++++|.+++..+..+ ..++++|++++.+
T Consensus 617 PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~----~~l~~~ar~~a~~ 676 (694)
T PRK15179 617 PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAAD----PGIARKAADWASA 676 (694)
T ss_pred eEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhcc----HHHHHHHHHHHHH
Confidence 9999999999999999999999998874 68999999988433344 4566777777754
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=269.77 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=210.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++++..+|. +.|..||.++++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876652 2367899999999 66667799999999 99865432110 00
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
......+... ...............+.+.+.+ .+||+||+|....... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLRL---------DAPGRDRAEAEALALAERALAA---GDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCccc---------ccchhhHhhHHHHHHHHHHHhc---CCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0100000000 0000001111222223333333 3899999998777655 56778999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+....... + ........+.++++|....+.... .....+++||++ .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~~~------------~~~~~vi~ngvd--~ 161 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPWPP------------LPWVATVHNGID--L 161 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhccc------------ccccEEecCCcC--h
Confidence 86433210 0 012356678899999665432111 145778899998 3
Q ss_pred CcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC-CCCcEEEecc
Q 005365 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISS 595 (700)
Q Consensus 517 ~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~-L~~~V~flG~ 595 (700)
+.+...+...+..+|.|+..+.||.+.+++++... +..++++|.|+..+ .+...+.+.. +.++|.|+|
T Consensus 162 ~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-----~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~G- 230 (335)
T cd03802 162 DDYPFRGPKGDYLLFLGRISPEKGPHLAIRAARRA-----GIPLKLAGPVSDPD-----YFYREIAPELLDGPDIEYLG- 230 (335)
T ss_pred hhCCCCCCCCCEEEEEEeeccccCHHHHHHHHHhc-----CCeEEEEeCCCCHH-----HHHHHHHHhcccCCcEEEeC-
Confidence 34443455666788999999999999999887543 56788888875432 2233333332 568899999
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
.++.+++..+++. +|++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|..
T Consensus 231 ---~~~~~~~~~~~~~-~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~ 304 (335)
T cd03802 231 ---EVGGAEKAELLGN-ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVAR 304 (335)
T ss_pred ---CCCHHHHHHHHHh-CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHH
Confidence 5566899999997 999999997 59999999999999999999999999999999999999986 9999999998
Q ss_pred HH
Q 005365 675 FF 676 (700)
Q Consensus 675 ll 676 (700)
+.
T Consensus 305 l~ 306 (335)
T cd03802 305 AD 306 (335)
T ss_pred Hh
Confidence 86
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=268.82 Aligned_cols=347 Identities=18% Similarity=0.230 Sum_probs=240.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++..++ |+.||...++. .++++|+++||+|+ ++|...+...... ...
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE------EVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc------ccc--
Confidence 6899987654 56789999998 77777899999999 8886644321110 000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H 436 (700)
.....+.+.... ......+. +...+...+.. .+||+||++... .+..+..++++.++|++++.|
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFKY-------PDFRLPLP----IPRALIIILKE---LGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccchh-------hhhhcccc----HHHHHHHHHhh---cCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 111111111100 00000111 11112222333 389999998743 345677788889999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhh-hHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQF-TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~-~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
+..... ....... ......... ..++..++.||.|++.|....+. +..+. .. .....+++|++..
T Consensus 117 ~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~----~~~~~----~~-~~~~vi~~~~~~~ 182 (374)
T cd03817 117 TMYEDY-THYVPLG----RLLARAVVRRKLSRRFYNRCDAVIAPSEKIADL----LREYG----VK-RPIEVIPTGIDLD 182 (374)
T ss_pred CCHHHH-HHHHhcc----cchhHHHHHHHHHHHHhhhCCEEEeccHHHHHH----HHhcC----CC-CceEEcCCccchh
Confidence 864311 1000000 000000011 23667889999999999765443 32221 11 1266778888732
Q ss_pred CCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 516 DPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 516 ~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
.+.. ..+.....+|.|+..+.||++.+++++..+....++..++++|.|. ..+.+.++++++
T Consensus 183 --~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~-----~~~~~~~~~~~~ 255 (374)
T cd03817 183 --RFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP-----EREELEELAREL 255 (374)
T ss_pred --ccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc-----hHHHHHHHHHHc
Confidence 2111 1223345678999999999999999999988776677888888763 235677788888
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+| .++.+++..+++. +|++++||..|++|++++|||+||+|||+|+.|+..|++.++.+|++++++|
T Consensus 256 ~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~ 330 (374)
T cd03817 256 GLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGD 330 (374)
T ss_pred CCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCC
Confidence 9999999999 5667899999997 9999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
. +++++|..++ +|++.+++|++++++.+.+
T Consensus 331 ~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 331 E-ALAEALLRLL----QDPELRRRLSKNAEESAEK 360 (374)
T ss_pred H-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 7 9999999998 8999999999999998765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=267.61 Aligned_cols=366 Identities=17% Similarity=0.171 Sum_probs=245.4
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999976653 3488899999 66667799999999 8886533221111000 001112
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC--CchHHHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS--DGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~--~~~lva~lla~~~giP~V~t~ 435 (700)
.++++++++...... ..++.+ +..+ ..|.......+.. ...+||+||++.+ .....+..+++..++|++++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777776554321 000000 1111 1222222333321 2348999999862 233455666677799999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+.+............. ...+.+.. ..++..++.+|.++++|....+.+. ..+ ........++||++..
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~-~~~-------~~~~~~~~i~~~~~~~ 200 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLLR--KLERLIYRRADAIVVISPGMREYLV-RRG-------VPPEKISVIPNGVDLE 200 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH-hcC-------CCcCceEEcCCCCCHH
Confidence 98754332111100000 00011122 2366789999999999977765443 111 1223467778888631
Q ss_pred CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 516 DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 516 ~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
..... ....+....+|.|+..+.||++.+++++..+... ++..++++|.|.. .+.+.+.+...++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~-----~~~~~~~~~~~~~ 274 (394)
T cd03794 201 LFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPE-----KEELKELAKALGL 274 (394)
T ss_pred HcCCccchhhhhhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCccc-----HHHHHHHHHHcCC
Confidence 11100 1123344567899999999999999999998776 6677888776643 2345555556666
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCc-----cHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF-----GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~f-----Gl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~ 661 (700)
++|.|+| .++.+++..+++. +|++++|+..|++ |++++|||+||+|||+|+.+|..+++.++.+|++++
T Consensus 275 -~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 275 -DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred -CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeC
Confidence 4699999 6667899999997 9999999998875 888999999999999999999999999989999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 662 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 662 p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|+++++++|.+++ .|++.+++|+++|++++.+
T Consensus 349 ~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 349 PGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred CCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999999999999998 8999999999999998874
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=260.83 Aligned_cols=350 Identities=19% Similarity=0.266 Sum_probs=246.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++... |..||...++. .|++.|.+.||+|+ +++......... .....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~------~~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDE------EEVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCce------eeecC-
Confidence 6899987654 22589999999 66777789999999 888654332111 00000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.......... ..........+...+...+... +||+||.+...........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLRRE---RFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhhhc---CCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 0001111112222233333333 899999998777766657778889999999999
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
......... .. .........+...++.+|.+++.|....+.+.+.... .......+++|++....
T Consensus 118 ~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~ 182 (374)
T cd03801 118 LEFGRPGNE--LG------LLLKLARALERRALRRADRIIAVSEATREELRELGGV-------PPEKITVIPNGVDTERF 182 (374)
T ss_pred chhhccccc--hh------HHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC-------CCCcEEEecCccccccc
Confidence 765432211 00 0001111235677999999999997776544443321 11246778888874221
Q ss_pred c--------ceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 K--------FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k--------~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
. .....+.....+|.|+....||++.+++++..+....++..+++.|.+ .....+.+.+++++..++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~-----~~~~~~~~~~~~~~~~~~ 257 (374)
T cd03801 183 RPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG-----PLREELEALAAELGLGDR 257 (374)
T ss_pred CccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCc-----HHHHHHHHHHHHhCCCcc
Confidence 1 111123334678999999999999999999999877677888888855 334567777788889999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+|+.++..|++.++.+|+++++.|+++++
T Consensus 258 v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 258 VTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred eEEEe----ccChhhHHHHHHh-cCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 99999 5567899999997 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|.+++ +|++.+.+|++++++.+.+
T Consensus 333 ~~i~~~~----~~~~~~~~~~~~~~~~~~~ 358 (374)
T cd03801 333 EAILRLL----DDPELRRRLGEAARERVAE 358 (374)
T ss_pred HHHHHHH----cChHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999866553
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=264.27 Aligned_cols=337 Identities=14% Similarity=0.144 Sum_probs=229.4
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++. + |..||.+.++. +|+++|++.||+|+ +++............ ..
T Consensus 1 kI~~v~~~-~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPY-P---------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCC-C---------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 68999864 2 34699999999 67777799999999 777543221110000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc---hH---HHHHHHHhcCCcE
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG---NI---VASLLAHKLGVTQ 431 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~---~l---va~lla~~~giP~ 431 (700)
....... . .... ....+.+.+... +||+||++.+.+ .. ......+..++|+
T Consensus 52 ~~~~~~~--~-------------~~~~-----~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV--L-------------DNPL-----DYRRAARAIRLS---GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee--c-------------CCch-----hHHHHHHHHhhc---CCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0 0000 011223333333 899999976322 12 2222234479999
Q ss_pred EEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC
Q 005365 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (700)
Q Consensus 432 V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG 511 (700)
|++.|+..... . .+. ....++..++.+|.|+++|... .++.+.... .....+++||
T Consensus 109 i~~~h~~~~~~----~-~~~----------~~~~~~~~~~~~d~ii~~s~~~---~~~~~~~~~------~~~~~~i~~~ 164 (366)
T cd03822 109 VVTLHTVLLHE----P-RPG----------DRALLRLLLRRADAVIVMSSEL---LRALLLRAY------PEKIAVIPHG 164 (366)
T ss_pred EEEEecCCccc----c-chh----------hhHHHHHHHhcCCEEEEeeHHH---HHHHHhhcC------CCcEEEeCCC
Confidence 99999861110 0 000 0112446688999999997222 233333221 1346778889
Q ss_pred CCCCCCcce------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 512 IDVFDPKFN------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 512 Id~~~~k~~------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
++....... ..++.....+|+|+..+.||++.+++++..+....++..++++|.+............+++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~ 244 (366)
T cd03822 165 VPDPPAEPPESLKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLG 244 (366)
T ss_pred CcCcccCCchhhHhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcC
Confidence 873222111 02334456789999999999999999999998877778888888765432211111114578889
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC--CccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E--~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+.++|.|+|. .++.+++..+++. +|++++||.+| +||++++|||+||+|||+|+.|+ .+.+.++.+|++++++
T Consensus 245 ~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 245 LADRVIFINR---YLPDEELPELFSA-ADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPG 319 (366)
T ss_pred CCCcEEEecC---cCCHHHHHHHHhh-cCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCC
Confidence 9999999982 2667899999997 99999999999 99999999999999999999999 7777888899999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++++|..++ +|++.+.+|++++++.+.+
T Consensus 320 d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 320 DPAALAEAIRRLL----ADPELAQALRARAREYARA 351 (366)
T ss_pred CHHHHHHHHHHHH----cChHHHHHHHHHHHHHHhh
Confidence 9999999999998 8999999999999988754
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=275.49 Aligned_cols=257 Identities=16% Similarity=0.157 Sum_probs=188.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.+||+||+|.+....+ ..+.+..++|+|++.|+..... ....|+ + .+..++.+|.+++.|...
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~~ 146 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPEY 146 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHHh
Confidence 4899999998764332 2223334899999999753211 111111 1 234578899999888332
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCC---cce-----------ecCCCCccccccCCchhhhchhhHHHHHH
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP---KFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIE 549 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~---k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~ 549 (700)
+. ..+ .+...+++||+|.... .++ -++++....+|.|++.+.||++.++++++
T Consensus 147 ~~---~~~----------~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 213 (372)
T cd03792 147 VP---PQV----------PPRKVIIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYR 213 (372)
T ss_pred cC---CCC----------CCceEEeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHH
Confidence 21 111 1223378899985321 000 02334456789999999999999999999
Q ss_pred HHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 550 ELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 550 ~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
.+....++..++++|.|........+.++++.+..++.++|.|+|... ++.+++..+++. +|+||+||.+|+||+++
T Consensus 214 ~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~-ad~~v~~s~~Eg~g~~~ 290 (372)
T cd03792 214 KVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPP--VSDLEVNALQRA-STVVLQKSIREGFGLTV 290 (372)
T ss_pred HHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCC--CCHHHHHHHHHh-CeEEEeCCCccCCCHHH
Confidence 988776788899998875422122234455555678888999999542 356888899886 99999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+||||||+|||+|+.||..++|.++.+|++++ ++++++++|.+++ .|++.+++|+++|++++.+
T Consensus 291 lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll----~~~~~~~~~~~~a~~~~~~ 354 (372)
T cd03792 291 TEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLL----RDPELRRKMGANAREHVRE 354 (372)
T ss_pred HHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999987 4678889999988 8999999999999998754
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-28 Score=257.93 Aligned_cols=343 Identities=15% Similarity=0.203 Sum_probs=238.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.. .||.+.++. .|++.|.++||+|+ +++....... . ...
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~------~----~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE------E----LEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc------c----ccc
Confidence 57888754 278888888 67777799999999 8886533211 0 011
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH-hcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~-~~giP~V~t~H 436 (700)
.++.++.+|..... .+ .+..+. ....+.+.+.+ .+||+||++.......+.+.++ ..+.+++++.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~~---~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLRK---ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHHh---cCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654311 01 111111 11223333433 3899999998777777776666 44567788888
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+......... ..+ .. ....++..++.+|.+++.|....+.+.+..... ........++|++...
T Consensus 113 ~~~~~~~~~~-~~~-------~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 176 (359)
T cd03808 113 GLGFVFTSGG-LKR-------RL--YLLLERLALRFTDKVIFQNEDDRDLALKLGIIK------KKKTVLIPGSGVDLDR 176 (359)
T ss_pred Ccchhhccch-hHH-------HH--HHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCC------cCceEEecCCCCChhh
Confidence 7643321111 000 11 112356778899999999977765443332110 0122344456666321
Q ss_pred Cccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEec
Q 005365 517 PKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 594 (700)
Q Consensus 517 ~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG 594 (700)
..... .+++....+|.|+..+.||++.+++++..+....++..++++|.+...+. .... ++.+.+..++|+|+|
T Consensus 177 ~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~--~~~~--~~~~~~~~~~v~~~g 252 (359)
T cd03808 177 FSPSPEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENP--AAIL--EIEKLGLEGRVEFLG 252 (359)
T ss_pred cCccccccCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchh--hHHH--HHHhcCCcceEEEee
Confidence 11111 13345577899999999999999999999987777888899888765432 1111 466677888999999
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
+ .+++..+++. +|++++||..|+||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+
T Consensus 253 ~------~~~~~~~~~~-adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~ 325 (359)
T cd03808 253 F------RDDVPELLAA-ADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER 325 (359)
T ss_pred c------cccHHHHHHh-ccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH
Confidence 5 3568888886 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 675 FFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 675 ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++ .|++.+.+++++|++++.+
T Consensus 326 l~----~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 326 LI----EDPELRARMGQAARKRAEE 346 (359)
T ss_pred HH----hCHHHHHHHHHHHHHHHHH
Confidence 87 8999999999999999754
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=261.80 Aligned_cols=336 Identities=15% Similarity=0.177 Sum_probs=233.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
++|+|+|++.|| .+||.+.++. .|++.|.+.||.|. |+|..+.+..|-. ..
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~gir------yl-- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIR------YL-- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCcccee------ee--
Confidence 479999999995 4699999999 88889999999999 9998887765432 22
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t 434 (700)
+.+..++.+|+... .+....|.+...+.-+...+.++ +..+||+|.+.+.+ -+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lrE---~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLRE---RIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhhh---ceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 23578888887542 12223333322222233344444 78999999987766 4777888999999999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
-|++.-..-..+ .|- ..... ..+...|.+||+|+..++.+ +- . .......+.+|+|.++.
T Consensus 121 dHSlfGfad~~s--i~~--n~ll~---------~sL~~id~~IcVshtskent---vl-r---~~L~p~kvsvIPnAv~~ 180 (426)
T KOG1111|consen 121 DHSLFGFADIGS--ILT--NKLLP---------LSLANIDRIICVSHTSKENT---VL-R---GALAPAKVSVIPNAVVT 180 (426)
T ss_pred ccccccccchhh--hhh--cceee---------eeecCCCcEEEEeecCCCce---EE-E---eccCHhHeeeccceeec
Confidence 999743321111 111 11111 24667899999996554311 00 0 00111123334444331
Q ss_pred --CCC-cceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE
Q 005365 515 --FDP-KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR 591 (700)
Q Consensus 515 --~~~-k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~ 591 (700)
|.| ....-+++.-+.+..+|+-..||.+.+++.++++....|+.++.++|. |+ ....+++..+++.+.++|.
T Consensus 181 ~~f~P~~~~~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GD--GP---k~i~lee~lEk~~l~~rV~ 255 (426)
T KOG1111|consen 181 HTFTPDAADKPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGD--GP---KRIDLEEMLEKLFLQDRVV 255 (426)
T ss_pred cccccCccccCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecC--Cc---ccchHHHHHHHhhccCceE
Confidence 111 111111222344455566778999999999999999888877766654 44 3356777888899999999
Q ss_pred EeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHH
Q 005365 592 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671 (700)
Q Consensus 592 flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAea 671 (700)
++| .++.+++-+.+.+ .|+|++||+.|+||++++|||+||+|||+|.+||++|++.++ -......++++++++
T Consensus 256 ~lG----~v~h~~Vr~vl~~-G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~ 328 (426)
T KOG1111|consen 256 MLG----TVPHDRVRDVLVR-GDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGA 328 (426)
T ss_pred Eec----ccchHHHHHHHhc-CcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHH
Confidence 999 7778999999997 999999999999999999999999999999999999999664 222444589999999
Q ss_pred HHHHHHhccCCHH
Q 005365 672 LVDFFEKCKADPS 684 (700)
Q Consensus 672 I~~ll~~~~~dp~ 684 (700)
+.+.+.+....|.
T Consensus 329 v~~ai~~~~~~p~ 341 (426)
T KOG1111|consen 329 VEKAITKLRTLPL 341 (426)
T ss_pred HHHHHHHhccCch
Confidence 9999988877755
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=258.28 Aligned_cols=333 Identities=14% Similarity=0.151 Sum_probs=232.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++...+ .||.+.++. +|+++|+++||+|+ +++....+. ... ...
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~--~~~-------~~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP--PFY-------ELD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC--Ccc-------ccC
Confidence 68888866542 589999999 67777799999999 888654320 000 011
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCC-cEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGV-TQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~gi-P~V~t~H 436 (700)
.++.+..++....... +.+ ..+...+.+.+.. .+||+||.+... ..........+. |++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~l~~---~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSKL----------LAR-FKKLRRLRKLLKN---NKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccch----------hcc-ccchHHHHHhhcc---cCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 2344444443321100 000 0111223333333 389999998866 222223333444 9999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+....... ...| ...++..++.+|.+++.|..... .... ........++||++...
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~---~~~~-------~~~~~~~vi~~~~~~~~ 169 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRA---LYYK-------KFNKNVVVIPNPLPFPP 169 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHH---Hhhc-------cCCCCeEEecCCcChhh
Confidence 76432210 0011 00255779999999999976641 1111 12234777888987422
Q ss_pred CcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 517 ~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
.... .+......+|+|+..+.||++.+++++..+....++..++++|.+... ..+.++++++++.++|.|.|.
T Consensus 170 ~~~~-~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~v~~~g~- 242 (348)
T cd03820 170 EEPS-SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPER-----EALEALIKELGLEDRVILLGF- 242 (348)
T ss_pred cccc-CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCH-----HHHHHHHHHcCCCCeEEEcCC-
Confidence 2111 245556788999999999999999999999877778888888876432 456677888999999999994
Q ss_pred cCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 597 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.++
T Consensus 243 -----~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~l 316 (348)
T cd03820 243 -----TKNIEEYYAK-ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRL 316 (348)
T ss_pred -----cchHHHHHHh-CCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHH
Confidence 4678889987 999999999999999999999999999999864 567788887899999999999999999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHH
Q 005365 676 FEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+ +||+.+++|+++|++.++
T Consensus 317 l----~~~~~~~~~~~~~~~~~~ 335 (348)
T cd03820 317 M----EDEELRKRMGANARESAE 335 (348)
T ss_pred H----cCHHHHHHHHHHHHHHHH
Confidence 8 899999999999977654
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-28 Score=259.93 Aligned_cols=338 Identities=14% Similarity=0.128 Sum_probs=226.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++...| ..+||.+.++. .|+++|+++||+|+ |++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999866543 23689999999 66666789999999 888653322111000
Q ss_pred cceEEEEecC--CCcccccccccccccchhhH-HHHHHHHHHHHHHHcCCCCeEEEEcCCCch-HHHHHHHHhcCCcEEE
Q 005365 358 KYSDILRVPF--RTEKGVVRKWISRFEVWPYL-ETYTEDVAVEIAKELQGKPDLIIGNYSDGN-IVASLLAHKLGVTQCT 433 (700)
Q Consensus 358 ~~v~I~rvp~--~~~~~~~~~~lsr~~i~~~l-~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~-lva~lla~~~giP~V~ 433 (700)
.+..+...+. ........ .......+. ..+...+.+.+.+. +||+||+|..... ......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPR---DLFHLSDYDNPAVVAEFARLLEDF---RPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchh---hhhHHHhccCHHHHHHHHHHHHHc---CCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111100 00000000 000000010 11222233334333 8999999875332 3344556778899999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+.+..... . .......|.++++|....+.+.+... .......++||++
T Consensus 126 ~~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~~~~--------~~~~~~vi~n~~~ 176 (359)
T cd03823 126 TLHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVANGL--------FAEKISVIRNGID 176 (359)
T ss_pred EEeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHHcCC--------CccceEEecCCcC
Confidence 99976432210 0 01122339999999776554333211 1234678889988
Q ss_pred CCCCccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE
Q 005365 514 VFDPKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR 591 (700)
Q Consensus 514 ~~~~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~ 591 (700)
........ .+......+|.|+..+.||++.+++++..+.. ++..++++|.+..... ..... +..++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~-----~~~~~---~~~~~v~ 246 (359)
T cd03823 177 LDRAKRPRRAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEE-----ESYEL---EGDPRVE 246 (359)
T ss_pred hhhccccccCCCCCceEEEEEecCccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhH-----HHHhh---cCCCeEE
Confidence 43221111 23334456789999999999999999998876 5778888887754321 11111 5668899
Q ss_pred EeccccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHH
Q 005365 592 WISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670 (700)
Q Consensus 592 flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAe 670 (700)
|+| .++.+++..+++. +|++++||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|++++++
T Consensus 247 ~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 247 FLG----AYPQEEIDDFYAE-IDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 999 5667999999997 999999997 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 671 ILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 671 aI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+|.+++ +|++.+++++++++++..
T Consensus 322 ~i~~l~----~~~~~~~~~~~~~~~~~~ 345 (359)
T cd03823 322 ALERLI----DDPDLLERLRAGIEPPRS 345 (359)
T ss_pred HHHHHH----hChHHHHHHHHhHHHhhh
Confidence 999998 799999999999988764
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=263.06 Aligned_cols=345 Identities=18% Similarity=0.176 Sum_probs=237.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.+..++ ..||++.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 688888665531 4699999999 66677799999999 877653322111000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.... . ... .....+.............+.. .+||+||++.+..... +..++|+++++|+
T Consensus 54 -~~~~--~-~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL--L-LRL---------PRRLLWGLLFLLRAGDRLLLLL---LGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc--c-ccc---------ccccccchhhHHHHHHHHHhhh---cCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0 000 0011111111111112222222 3899999988665544 5678999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
............+ ........++..++.+|.+++.|...++.+.+.++.. ...+..++||++....
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~-------~~~~~vi~~~~~~~~~ 178 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVP-------PDKIVVIPLGVDPRFR 178 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcC-------HHHEEeeccccCcccc
Confidence 7654433221111 0011112356789999999999987776555544311 1235677888874222
Q ss_pred cce--------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 KFN--------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k~~--------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... ..+......+|.|+..+.||++.+++++..+....++..++++|.+...... ..+.+++.++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~~~~~~~~~~ 254 (365)
T cd03809 179 PPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEE----LLARLRELGLGDR 254 (365)
T ss_pred CCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHH----HHHHHHHcCCCCe
Confidence 111 2233445678999999999999999999999887667788888876544322 2233366788999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.|+..|++. .+|++++++|+++++
T Consensus 255 v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~ 327 (365)
T cd03809 255 VRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALA 327 (365)
T ss_pred EEECC----CCChhHHHHHHhh-hhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHH
Confidence 99999 5667899999997 9999999999999999999999999999999999999994 579999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|.+++ +|++.+.+++++|++.+.+
T Consensus 328 ~~i~~l~----~~~~~~~~~~~~~~~~~~~ 353 (365)
T cd03809 328 AAIERLL----EDPALREELRERGLARAKR 353 (365)
T ss_pred HHHHHHh----cCHHHHHHHHHHHHHHHHh
Confidence 9999987 8999999999999876653
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-28 Score=260.13 Aligned_cols=336 Identities=18% Similarity=0.213 Sum_probs=230.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++..+. |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987654 34589999999 67777899999999 888653221110 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H 436 (700)
....+...+......+ . .... ....+.+.+... +||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~-~-----~~~~-----~~~~~~~~~~~~---~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI-R-----LALP-----PRRRVRRLLDAF---APDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce-E-----eccc-----chhhHHHHHHhc---CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111110 0 0000 011122233333 899999976433 45667778889999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+............+ ...+. ...++...+.+|.+++.|....+ .+.. ...+....+++|++.
T Consensus 116 ~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~d~i~~~s~~~~~----~~~~------~~~~~~~~~~~g~~~-- 176 (364)
T cd03814 116 TDFPEYLRYYGLGP-----LSWLA--WAYLRWFHNRADRVLVPSPSLAD----ELRA------RGFRRVRLWPRGVDT-- 176 (364)
T ss_pred cChHHHhhhcccch-----HhHhh--HHHHHHHHHhCCEEEeCCHHHHH----HHhc------cCCCceeecCCCccc--
Confidence 76432111000000 00000 11245678899999999977654 1111 112345667778763
Q ss_pred Ccceec-----------CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 517 PKFNIV-----------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 517 ~k~~vI-----------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
..+... +++....+|.|+..+.||.+.+++++..+... ++..++++|.|... ..++ +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~~l~i~G~~~~~-----~~~~------~ 244 (364)
T cd03814 177 ELFHPRRRDEALRARLGPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPVRLVIVGDGPAR-----ARLE------A 244 (364)
T ss_pred cccCcccccHHHHHHhCCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCceEEEEeCCchH-----HHHh------c
Confidence 111100 12234567999999999999999999999876 67788888876432 2222 4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
..++|.|+| .++.+++..+++. +|++++||..|+||++++||||||+|||+++.|+..|+++++.+|++++++|.
T Consensus 245 ~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 245 RYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred cCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 567899999 5667899999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ .|++.+++|++++++.+.
T Consensus 320 ~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~ 348 (364)
T cd03814 320 EAFAAALAALL----ADPELRRRMAARARAEAE 348 (364)
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHh
Confidence 99999999998 899999999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-28 Score=270.33 Aligned_cols=210 Identities=17% Similarity=0.165 Sum_probs=165.9
Q ss_pred HHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceec----CCCCccccccCCchhhhc
Q 005365 465 ADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV----SPGADMSIYFPYTEEKRR 540 (700)
Q Consensus 465 ~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI----p~G~d~~~F~g~~~~~Kg 540 (700)
.++.+++.||.|+++|....+.+++.++.. ....+++||+++. .+... ..+....+|.|+..+.||
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~--------~~~~vi~~gvd~~--~~~~~~~~~~~~~~~il~vgr~~~~K~ 251 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSLWKRN--------TKPSIVYPPCDVE--ELLKLPLDEKTRENQILSIAQFRPEKN 251 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHHhCcC--------CCcEEEcCCCCHH--HhcccccccccCCcEEEEEEeecCCCC
Confidence 477889999999999987766554443211 2467888998842 22111 223446789999999999
Q ss_pred hhhHHHHHHHHhhcCCC-----ccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 541 LKSFHPEIEELLYSDVE-----NKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 541 l~~Ll~Ai~~Ll~~~~~-----~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
+..+++|+..+....++ .+++++|++.. ++.++.++++++++++++.++|.|+| .++.+++..+|+. +|
T Consensus 252 ~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~-ad 326 (419)
T cd03806 252 HPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST-AS 326 (419)
T ss_pred HHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-Ce
Confidence 99999999999876544 67788876532 22346788999999999999999999 6678999999997 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc-ccccc---cCCeEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIV---NGKSGYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKI 689 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~-~EiI~---dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d-p~~~~~m 689 (700)
++|+||..|+||++++||||||+|||+++.||+ .|++. +|.+|++++ |++++|++|.+++ ++ +..++.+
T Consensus 327 v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~~~ 400 (419)
T cd03806 327 IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERLRI 400 (419)
T ss_pred EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHHHH
Confidence 999999999999999999999999999999886 57887 899999985 9999999999998 54 4455555
Q ss_pred HHHHHH
Q 005365 690 SLGGLK 695 (700)
Q Consensus 690 s~~ar~ 695 (700)
++++++
T Consensus 401 ~~~~~~ 406 (419)
T cd03806 401 RRAARS 406 (419)
T ss_pred HHHHHH
Confidence 444444
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-28 Score=255.73 Aligned_cols=342 Identities=16% Similarity=0.200 Sum_probs=234.3
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++... .||...++. +++++|+++||+|+ +++............. ..
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~~------~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLPS------NV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCcccccccc------ch
Confidence 6788876432 489999999 67777799999999 8876533221110000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H 436 (700)
............ ... ..+...+.+.+... +||+||++.. ...+.+.+..+. ++|++++.|
T Consensus 52 ~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLKS-----------LRD----LLAILRLRRLLRKE---KPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeeccc-----------ccc----hhHHHHHHHHHHhc---CCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 000000000000 001 11122334444443 8999999887 555555544444 899999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+............+ ..+...++.+|.+++.|....+.+.+.++. .......++||++...
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------~~~~~~vi~~~~~~~~ 172 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKLLGI-------PPDKIEVIYNPIDIEE 172 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHhhcC-------CccccEEecCCcChhh
Confidence 87654322111000 124567899999999997776544444331 1234677888887321
Q ss_pred Ccc--e-----ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 517 PKF--N-----IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 517 ~k~--~-----vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... . ..++.....+|.|+..+.||++.+++++..+....++..++++|.+.. .+.+.++++++++.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----~~~~~~~~~~~~~~~~ 247 (353)
T cd03811 173 IRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----REELEALAKELGLADR 247 (353)
T ss_pred cCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----HHHHHHHHHhcCCCcc
Confidence 111 1 112334467889999999999999999999987767788888887643 2456688888999999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+|.. +++..+++. +|++++||.+|++|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++
T Consensus 248 v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~ 320 (353)
T cd03811 248 VHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALA 320 (353)
T ss_pred EEEeccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHH
Confidence 9999953 346778886 999999999999999999999999999999999999999999999999999999995
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+.+..+ ..+..+++.+.++++++++.+.++
T Consensus 321 ~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 321 AAALAL-LDLLLDPELRERLAAAARERVARE 350 (353)
T ss_pred HHHHHH-HhccCChHHHHHHHHHHHHHHHHH
Confidence 444433 244589999999999888887653
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=283.10 Aligned_cols=271 Identities=17% Similarity=0.205 Sum_probs=208.7
Q ss_pred CCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCC--CCchhhhh--ccc-ccchhhhhhHHHHHHhhCCEEE
Q 005365 404 GKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKN--LDD-KYHFSCQFTADLIAMNHTDFII 477 (700)
Q Consensus 404 ~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~--~~~~~w~~--~~~-~y~~~~~~~~E~~al~~AD~II 477 (700)
.++|+||+|.. ..++.+.+++++.|+|+|+|.|+....... .....|.. +.. ..++. ...++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 47899999864 456778888999999999999997432100 00000110 000 01111 123667899999999
Q ss_pred ecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----cCCCCccccccCCchhhhchhhHHHHHHHHh
Q 005365 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----VSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (700)
Q Consensus 478 t~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll 552 (700)
++|....+...+ .+ .....+.+|+||++. ..+.. .++.....+|.|+..+.||++.+++|++.+.
T Consensus 250 ~~s~~~~~~~~~-~g-------~~~~ki~vIpNgid~--~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 319 (475)
T cd03813 250 TLYEGNRERQIE-DG-------ADPEKIRVIPNGIDP--ERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR 319 (475)
T ss_pred ecCHHHHHHHHH-cC-------CCHHHeEEeCCCcCH--HHcCCccccccCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 999766442211 11 112246788999984 22221 1233446789999999999999999999998
Q ss_pred hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHH
Q 005365 553 YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 632 (700)
Q Consensus 553 ~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEA 632 (700)
...++..++++|.++. ...+.++++++++++++.++|+|+| . .++..+++. +|++|+||..|+||++++||
T Consensus 320 ~~~p~~~l~IvG~g~~-~~~~~~e~~~li~~l~l~~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEA 390 (475)
T cd03813 320 KKIPDAEGWVIGPTDE-DPEYAEECRELVESLGLEDNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEA 390 (475)
T ss_pred HhCCCeEEEEECCCCc-ChHHHHHHHHHHHHhCCCCeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHH
Confidence 8888888999888752 2356788999999999999999999 2 456778886 99999999999999999999
Q ss_pred HHcCCCEEEcCCCCccccccc------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVN------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~d------g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
||||+|||+|+.||.+|++.+ |.+|++++++|++++|++|.+++ +|++.+++|+++|++++++
T Consensus 391 ma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~ 459 (475)
T cd03813 391 MAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLL----KDPELRRAMGEAGRKRVER 459 (475)
T ss_pred HHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 67999999999999999999998 8999999999999999875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-27 Score=263.06 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=169.8
Q ss_pred HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC-cceec-CCCCccccccCCchhhhchhh
Q 005365 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP-KFNIV-SPGADMSIYFPYTEEKRRLKS 543 (700)
Q Consensus 466 E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~-k~~vI-p~G~d~~~F~g~~~~~Kgl~~ 543 (700)
+....+.||.|+++|...++.+++.++. .....++++|++.... ....- +++....+|.|++.++||++.
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~~~--------~~~i~vvyp~vd~~~~~~~~~~~~~~~~~il~vGR~~~~Kg~~l 285 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALWRI--------PERIKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHAL 285 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHcCC--------CCCeEEEcCCCCHHHcccCCccccCCCCEEEEEEeeeccCCHHH
Confidence 5566799999999998776555443321 1235678888873111 11110 123345789999999999999
Q ss_pred HHHHHHHHhhc----CCCccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 544 FHPEIEELLYS----DVENKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 544 Ll~Ai~~Ll~~----~~~~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
+++|+..+... .++.+++++|++.. ++.++.++++++++++++.++|+|+| .++.+++..+|+. ++++|+
T Consensus 286 lI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g----~v~~~el~~ll~~-a~~~v~ 360 (463)
T PLN02949 286 QLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHK----NVSYRDLVRLLGG-AVAGLH 360 (463)
T ss_pred HHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeC----CCCHHHHHHHHHh-CcEEEe
Confidence 99999987653 35678888887642 23356688999999999999999999 5667899999997 999999
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEcCCCCcc-ccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~-EiI~d---g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
||.+|+||++++||||||+|||+++.||+. |++.+ |.+|++++ |++++|++|.++++ .+++.+++|+++|+
T Consensus 361 ~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~---~~~~~r~~m~~~ar 435 (463)
T PLN02949 361 SMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLR---MRETERLEIAAAAR 435 (463)
T ss_pred CCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHh---CCHHHHHHHHHHHH
Confidence 999999999999999999999999999985 77765 67899985 99999999999982 36889999999999
Q ss_pred HHHHh
Q 005365 695 KRIEE 699 (700)
Q Consensus 695 ~ra~e 699 (700)
+++.+
T Consensus 436 ~~~~~ 440 (463)
T PLN02949 436 KRANR 440 (463)
T ss_pred HHHHH
Confidence 98853
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=264.45 Aligned_cols=333 Identities=14% Similarity=0.094 Sum_probs=207.4
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCC-CceeeccEEEeccCCCCCC-C------C
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQG-LDITPQILIITRLLPDAVG-T------T 346 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~G-heV~~~i~VvT~~~p~~~~-~------~ 346 (700)
+.|||+|++..+. |..+|+.+.++ .++..|+++| |+|+ |+.+..+.... . .
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4699999998776 56789999999 7777889999 7999 99876543210 0 0
Q ss_pred Cccce--e-EecCccceEEEEecCCCcccccccccc--cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHH-
Q 005365 347 CGQRL--E-KVYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIV- 419 (700)
Q Consensus 347 ~~~~~--e-~i~~~~~v~I~rvp~~~~~~~~~~~ls--r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lv- 419 (700)
++... | .+....+-++.|+|.-.... .+...+ +..+++ ..++.+.+.+. +|||||.+.... ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~~---~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPDE---EADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHhc---CCCEEEEcCchhhhhHH
Confidence 00000 0 00000012444544322110 000000 011111 23455566555 899999988543 443
Q ss_pred -HHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhcccccc
Q 005365 420 -ASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESH 497 (700)
Q Consensus 420 -a~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~ 497 (700)
+..++++.++ +|.++|+-.. .|... ...+.. ....++..++ ..-.++|.+++.|.... +....
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~-~~l~~~~~~~----~~r~~~d~vi~pS~~~~----~l~~~---- 197 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVK-AFLLKYINSW----VVDIYCHKVIRLSAATQ----DYPRS---- 197 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHH-HHHHHHHHHH----HHHHhcCEEEccCHHHH----HHhhC----
Confidence 6667777765 8889998421 11100 000000 0001111111 11234899999996432 21110
Q ss_pred ccccCCCeEEeecCCCCC--CCc---ceecCCCCc----cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh
Q 005365 498 TAFTLPGLYRVVHGIDVF--DPK---FNIVSPGAD----MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL 568 (700)
Q Consensus 498 ~~~~~p~l~~v~nGId~~--~~k---~~vIp~G~d----~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ 568 (700)
....++||+.. .+. .....++.+ ..+|+||+.++||++.+++++..+....++.++.|+|.|
T Consensus 198 -------~i~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdG-- 268 (462)
T PLN02846 198 -------IICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSG-- 268 (462)
T ss_pred -------EEecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCC--
Confidence 12234688731 111 111112222 256999999999999999999998876667667777666
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcc
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 648 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~ 648 (700)
++ .++++++++++++..++ |.|.. +.+ .+++. +|+||+||.+|+||++++||||||+|||+++.++ .
T Consensus 269 p~---~~~L~~~a~~l~l~~~v-f~G~~----~~~---~~~~~-~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~ 335 (462)
T PLN02846 269 ED---SDEVKAAAEKLELDVRV-YPGRD----HAD---PLFHD-YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-N 335 (462)
T ss_pred cc---HHHHHHHHHhcCCcEEE-ECCCC----CHH---HHHHh-CCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-c
Confidence 33 35778888888887555 77732 233 35554 8999999999999999999999999999999998 5
Q ss_pred cccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 649 EIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 649 EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+++.++.+|+.++ |+++++++|..++
T Consensus 336 ~~v~~~~ng~~~~--~~~~~a~ai~~~l 361 (462)
T PLN02846 336 EFFKQFPNCRTYD--DGKGFVRATLKAL 361 (462)
T ss_pred ceeecCCceEecC--CHHHHHHHHHHHH
Confidence 9999999999985 8999999999998
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=256.31 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=211.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++... ..||.+.++. .++++|+++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997532 2489999999 66667799999999 8764311
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc--CCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL--GVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~--giP~V~t 434 (700)
. +.+.+... +||+||.|......+......+. ++|+|++
T Consensus 42 ------------~------------------------~~~~~~~~---~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIEII---NADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChhcc---cCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 01112222 89999998866555444444444 9999999
Q ss_pred ecCCccccCC----CCchhhhh------ccccc---chhhhhhH--HHHHHhhCCEEEecCHHHHHhhhhhhcccccccc
Q 005365 435 AHALEKTKYP----DSDIYWKN------LDDKY---HFSCQFTA--DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 499 (700)
Q Consensus 435 ~H~l~~~~~~----~~~~~w~~------~~~~y---~~~~~~~~--E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~ 499 (700)
.|+.+..... .....|.. ....+ .+..+... .......++.++++|....+.+++.+ .
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~-------~ 155 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSS-------L 155 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhcc-------c
Confidence 9987543211 00001100 00000 01111111 11122557788888866554333321 1
Q ss_pred ccCCCeEEeecCCCCCCCc-c--------eecCCCCccccccCCch--hhhchhhHHHHHHHHhhc-CCCccEEEEecCC
Q 005365 500 FTLPGLYRVVHGIDVFDPK-F--------NIVSPGADMSIYFPYTE--EKRRLKSFHPEIEELLYS-DVENKEHLKESKD 567 (700)
Q Consensus 500 ~~~p~l~~v~nGId~~~~k-~--------~vIp~G~d~~~F~g~~~--~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd 567 (700)
+.-..+.+++||++....+ . .-+++......|.++.. +.||+..++++++.+... .++..++++|.++
T Consensus 156 ~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~ 235 (365)
T cd03825 156 FKGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASD 235 (365)
T ss_pred cCCCceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCc
Confidence 2224577888898742110 0 00122222233444443 379999999999988764 3455666666553
Q ss_pred hhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc
Q 005365 568 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 647 (700)
Q Consensus 568 ~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~ 647 (700)
... . .++..+|.|+|+..+ .+++..+++. +|++++||..|+||++++|||+||+|||+++.||.
T Consensus 236 ~~~-----~-------~~~~~~v~~~g~~~~---~~~~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~ 299 (365)
T cd03825 236 PEI-----P-------PDLPFPVHYLGSLND---DESLALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGI 299 (365)
T ss_pred hhh-----h-------ccCCCceEecCCcCC---HHHHHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCC
Confidence 321 0 145678999995442 5788899986 99999999999999999999999999999999999
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 648 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 648 ~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|++.++.+|+++++.|+++++++|.+++ +|++.+.+|++++++++.+
T Consensus 300 ~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 347 (365)
T cd03825 300 PDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDEREELGEAARELAEN 347 (365)
T ss_pred hhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 8999999999999998764
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-27 Score=251.24 Aligned_cols=330 Identities=18% Similarity=0.197 Sum_probs=222.0
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++++. ..||.+.++. +|++.|+++||+|+ |++...... .... ..
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~~~-------~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VKPP-------ID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-ccch-------hh-
Confidence 477776542 2499999999 66777799999999 887542211 0000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H 436 (700)
......++.... .+.++. ....+.+.+++. +||+||+|......++.++.+. .++|++++.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~---~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLL-ALWKLRKILRQF---KPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHH-HHHHHHHHHHhc---CCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222111 011111 112233334443 8999999987776666655544 3678999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+..... .+ ... ..+.....++.++++|....+.+.+... +....+..++||++...
T Consensus 112 ~~~~~~------~~------~~~-----~~~~~~~~~~~~~~~s~~~~~~~~~~~~-------~~~~~~~~i~ng~~~~~ 167 (360)
T cd04951 112 SKNEGG------RL------RML-----AYRLTDFLSDLTTNVSKEALDYFIASKA-------FNANKSFVVYNGIDTDR 167 (360)
T ss_pred ccCchh------HH------HHH-----HHHHHhhccCceEEEcHHHHHHHHhccC-------CCcccEEEEccccchhh
Confidence 753211 00 000 1123344578888888666543332211 22235778899987321
Q ss_pred Ccce-----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 517 PKFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 517 ~k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
-... -++++....+|.|+..+.||++.+++++..+....++..++++|.|.. .+.+.+.+++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----~~~~~~~~~~~~ 242 (360)
T cd04951 168 FRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----RATLERLIKALG 242 (360)
T ss_pred cCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----HHHHHHHHHhcC
Confidence 1000 012334457889999999999999999999987777788888886643 246777888889
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
+.++|.|+|++ +++..+++. +|++++||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+
T Consensus 243 ~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~ 313 (360)
T cd04951 243 LSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDP 313 (360)
T ss_pred CCCcEEEeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCH
Confidence 98999999953 457788886 99999999999999999999999999999999999999976 8999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.++++ .+++.+..++++ ++.+.
T Consensus 314 ~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~ 342 (360)
T cd04951 314 EALANKIDEILK---MSGEERDIIGAR-RERIV 342 (360)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHH-HHHHH
Confidence 999999999983 567777777766 65554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=250.24 Aligned_cols=336 Identities=15% Similarity=0.149 Sum_probs=235.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++.+... .||.++++. .|+++|.++||+|. +++...... .......
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~~---- 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELEE---- 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHHh----
Confidence 5777775442 289999999 67777799999999 887543211 1111110
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H 436 (700)
.++.++.++..... ..+ .+...+.+.+.+. +||+||++.......+...++. .++|++++.|
T Consensus 50 ~~i~v~~~~~~~~~----------~~~----~~~~~~~~~~~~~---~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPGR----------PDP----GALLRLYKLIRRL---RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEeccccc----------ccH----HHHHHHHHHHHhh---CCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 24556555443210 011 1122334444444 8999999877766666666665 6889999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+...... .|.. .. ....+....+.+|.++++|....+...+. .+.......++||++...
T Consensus 113 ~~~~~~~-----~~~~-----~~--~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--------~~~~~~~~vi~~~~~~~~ 172 (365)
T cd03807 113 HSDLDLG-----KKST-----RL--VARLRRLLSSFIPLIVANSAAAAEYHQAI--------GYPPKKIVVIPNGVDTER 172 (365)
T ss_pred CCccccc-----chhH-----hH--HHHHHHHhccccCeEEeccHHHHHHHHHc--------CCChhheeEeCCCcCHHh
Confidence 8754421 1110 00 11124456778999999997765533332 122234667888887421
Q ss_pred Cc--ce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH-Hc
Q 005365 517 PK--FN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID-QY 584 (700)
Q Consensus 517 ~k--~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~-~l 584 (700)
.. .. -+++.....+|.|+..+.||++.+++++..+....++..++++|.+... . ....... ++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~--~---~~~~~~~~~~ 247 (365)
T cd03807 173 FSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR--A---NLELLALKEL 247 (365)
T ss_pred cCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch--h---HHHHHHHHhc
Confidence 10 00 0123344567999999999999999999999877777788888776433 2 2333343 78
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+|.+ +++..+++. +|++++||.+|+||++++|||+||+|||+|+.||..|++.+ +|++++++|
T Consensus 248 ~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~ 318 (365)
T cd03807 248 GLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGD 318 (365)
T ss_pred CCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCC
Confidence 889999999943 467888886 99999999999999999999999999999999999999977 899999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++++|.+++ +|++.+.++++++++++.+
T Consensus 319 ~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 319 PEALAEAIEALL----ADPALRQALGEAARERIEE 349 (365)
T ss_pred HHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999998875
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=247.17 Aligned_cols=257 Identities=23% Similarity=0.367 Sum_probs=197.6
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.+||+||+|+.. ....+..+++..++|++++.|+.......... .....++..++.+|.+++.|..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~~ 158 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSEA 158 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCHH
Confidence 489999998744 34566777788899999999987554422111 0111245678999999999977
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----------cCCCCccccccCCchhhhchhhHHHHHHHHh
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll 552 (700)
..+.+++.. ..-.....+++|++. ..+.. ........+|.|+..+.||++.++++++.+.
T Consensus 159 ~~~~~~~~~--------~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 159 LADELKALG--------IDPEKVTVIPNGVDT--ERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred HHHHHHHhc--------CCCCceEEcCCCcCc--ccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 765444331 112346677788873 22211 1223445688999999999999999999998
Q ss_pred hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHH
Q 005365 553 YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 632 (700)
Q Consensus 553 ~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEA 632 (700)
...++..+++.|.+.. .+.+.+.++++++.++|.++| .++.+++..+++. ||++++||..|++|++++||
T Consensus 229 ~~~~~~~l~i~g~~~~-----~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea 298 (377)
T cd03798 229 KKRPDVHLVIVGDGPL-----REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEA 298 (377)
T ss_pred hcCCCeEEEEEcCCcc-----hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHH
Confidence 7766777777776532 245677777888989999999 6667999999997 99999999999999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++ +++.. +++.++++.+.+
T Consensus 299 ~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~ 359 (377)
T cd03798 299 MACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAE 359 (377)
T ss_pred HhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 77775 666666666543
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-27 Score=260.46 Aligned_cols=267 Identities=15% Similarity=0.160 Sum_probs=199.3
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHhcCCc-EEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecC
Q 005365 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (700)
Q Consensus 403 ~~~pDlIh~h~~~~-~lva~lla~~~giP-~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S 480 (700)
..++|++|+++... +..+..+.++.+.+ +|.++|+....... ....+. ...+.+++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDR--------YPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhh--------ccccch-----HHHHHHHhcCCEEEECC
Confidence 35778999965433 34455566777766 89999976432100 001111 11234578999999999
Q ss_pred HHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 481 ~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
....+.+++.++... .....+++|++...........+....+|.|++.+.||++.+++++..+....++.++
T Consensus 192 ~~~~~~l~~~~~~~~-------~ki~vi~~gv~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l 264 (407)
T cd04946 192 EQGRNYLQKRYPAYK-------EKIKVSYLGVSDPGIISKPSKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKI 264 (407)
T ss_pred HHHHHHHHHHCCCcc-------ccEEEEECCcccccccCCCCCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceE
Confidence 888776666554332 2356788898742211111123344567899999999999999999999887665554
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCE
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPT 639 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPV 639 (700)
.+...|+++. .+.+++++++.+..++|.|+| .++.+++.++++. .+|+||+||.+||+|++++||||||+||
T Consensus 265 ~~~iiG~g~~---~~~l~~~~~~~~~~~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PV 337 (407)
T cd04946 265 KWTHIGGGPL---EDTLKELAESKPENISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPV 337 (407)
T ss_pred EEEEEeCchH---HHHHHHHHHhcCCCceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCE
Confidence 4433333332 356777787888888999999 5667899999964 3789999999999999999999999999
Q ss_pred EEcCCCCcccccccCCeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 640 FATCKGGPAEIIVNGKSGYHIDPY-HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 640 VAT~~GG~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
|+|++||.+|+|.++.+|++++++ |+++++++|.+++ +||+.+++|+++|++++.++
T Consensus 338 Ias~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~ 395 (407)
T cd04946 338 IATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFI----DNEEEYQTMREKAREKWEEN 395 (407)
T ss_pred EeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874 8999999999998 79999999999999998763
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-27 Score=255.90 Aligned_cols=314 Identities=11% Similarity=-0.007 Sum_probs=200.6
Q ss_pred HHHHHHHHCCC-ceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchh---hHHHH-
Q 005365 316 EMLLRIKQQGL-DITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLETY- 390 (700)
Q Consensus 316 eLa~~L~~~Gh-eV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~---~l~~f- 390 (700)
.++.+|+++|| +|+ |+|...+. . ........+++++|+|......- + ..++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~~---~-----~~~~~~~~~v~v~r~~~~~~~~~----~--~~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGSE---P-----IPALLNHPSIHIHLMVQPRLLQR----L--PRVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCCC---C-----CHHHhcCCcEEEEECCCcccccc----c--ccchHHHHHHHHHH
Confidence 45666788886 799 88753211 1 01111223689999975211100 1 11222 22221
Q ss_pred --HHHHHHHHHHHcCCCCeEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhH
Q 005365 391 --TEDVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA 465 (700)
Q Consensus 391 --~~~~~~~l~~~~~~~pDlIh~h~~~~---~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~ 465 (700)
...+.+.+.. ...+||+||+|.... ...+.++++..++|+|++.|+.+......+. . .....+++..+ .
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~-~--~~~~~~~~~~~--~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSL-G--RSHPLVRLYRW--Y 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhccc-C--CCCHHHHHHHH--H
Confidence 1122222211 134899999976433 3466677788899999999987421110000 0 00011122222 3
Q ss_pred HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-CCCcc--eecCCCC-ccccccCCchhhhch
Q 005365 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV-FDPKF--NIVSPGA-DMSIYFPYTEEKRRL 541 (700)
Q Consensus 466 E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~-~~~k~--~vIp~G~-d~~~F~g~~~~~Kgl 541 (700)
|+..++.||.||++|....+.+.+.++ .+ ..+++||+.. +.+.. .-..++. ...++.|++.+.||+
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~~g---------~~-i~vi~n~~~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQNWG---------IR-ATVLYDQPPEFFRPASLEIRLRPNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHhcC---------CC-eEEECCCCHHHcCcCCchhcccCCCcEEEEEeCceeccCCH
Confidence 778899999999999776654433222 12 4566777421 11100 0011111 234566999999999
Q ss_pred hhHHHHHHHHhh-----------------cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhH
Q 005365 542 KSFHPEIEELLY-----------------SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE 604 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~-----------------~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~e 604 (700)
+.+++|+..+.. ..++..++++|.| + +.++++++++++++.+ +.|.|. .++.++
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G--~---~~~~l~~~~~~~~l~~-v~~~~~---~~~~~~ 299 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG--P---QKAMYEEKISRLNLRH-VAFRTM---WLEAED 299 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCC--C---CHHHHHHHHHHcCCCc-eEEEcC---CCCHHH
Confidence 999999987742 2345666676665 3 2367888999999987 888662 355789
Q ss_pred HHHHHHccCcEEEeCC---CCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 605 LYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 605 l~~~la~~aDvfV~PS---~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
+..+|+. +|++|.|+ ..|+||++++||||||+|||+|+.||.+|+|++|.+|++++ |++++|++|.++
T Consensus 300 ~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 300 YPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred HHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 9999997 99999863 24899999999999999999999999999999999999997 799999999876
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=257.92 Aligned_cols=255 Identities=18% Similarity=0.167 Sum_probs=181.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCC------CchhhhhcccccchhhhhhHHHHHHhhCCEEE
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPD------SDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 477 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~------~~~~w~~~~~~y~~~~~~~~E~~al~~AD~II 477 (700)
.++|+||.+..... ..+.+..++|.+..+|+.....+.. ....+......+........|..+++++|.|+
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 48999998654222 2222456789999888742211110 00000000000011111223667789999999
Q ss_pred ecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 478 t~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
++|...++.+++.++. ...+++||++ ...+...+...+..+|.|++.+.||++.+++++..+.
T Consensus 159 ~~S~~~~~~~~~~~~~----------~~~vi~~~~d--~~~~~~~~~~~~~il~~G~~~~~K~~~~li~a~~~~~----- 221 (351)
T cd03804 159 ANSRFVARRIKKYYGR----------DATVIYPPVD--TDRFTPAEEKEDYYLSVGRLVPYKRIDLAIEAFNKLG----- 221 (351)
T ss_pred ECCHHHHHHHHHHhCC----------CcEEECCCCC--HhhcCcCCCCCCEEEEEEcCccccChHHHHHHHHHCC-----
Confidence 9998877655443321 2356788887 3333333334456789999999999999999998762
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 637 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl 637 (700)
.+++++|.|... +.+++ +..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+
T Consensus 222 ~~l~ivG~g~~~-----~~l~~-----~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~ 285 (351)
T cd03804 222 KRLVVIGDGPEL-----DRLRA-----KAGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGT 285 (351)
T ss_pred CcEEEEECChhH-----HHHHh-----hcCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCC
Confidence 568888876321 22332 4568899999 6667999999997 999999999 999999999999999
Q ss_pred CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHHHH
Q 005365 638 PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKRIE 698 (700)
Q Consensus 638 PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~ra~ 698 (700)
|||+|+.||..|++.++.+|++++++|++++|++|..++ +|+ ..+++++++++++..
T Consensus 286 Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~ 343 (351)
T cd03804 286 PVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFE----KNEDFDPQAIRAHAERFSE 343 (351)
T ss_pred CEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHH----hCcccCHHHHHHHHHhcCH
Confidence 999999999999999999999999999999999999998 677 667778887765543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=260.22 Aligned_cols=236 Identities=15% Similarity=0.083 Sum_probs=156.8
Q ss_pred CCCeEEEEcCCCch---HHHH------HHHHhcCCcEEEEecCCcccc----CCCCchhhhhcc-----------cccch
Q 005365 404 GKPDLIIGNYSDGN---IVAS------LLAHKLGVTQCTIAHALEKTK----YPDSDIYWKNLD-----------DKYHF 459 (700)
Q Consensus 404 ~~pDlIh~h~~~~~---lva~------lla~~~giP~V~t~H~l~~~~----~~~~~~~w~~~~-----------~~y~~ 459 (700)
.+|||||.|...+. +... +..+..++|+|.|.|+.+... |...-..|+.-- ..+..
T Consensus 93 ~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~ 172 (405)
T PRK10125 93 PGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDR 172 (405)
T ss_pred cCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccch
Confidence 38999999886653 3111 112345799999999997542 111111222100 00011
Q ss_pred hhhh-hH----HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc----cee--cCCCCcc
Q 005365 460 SCQF-TA----DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK----FNI--VSPGADM 528 (700)
Q Consensus 460 ~~~~-~~----E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k----~~v--Ip~G~d~ 528 (700)
+.+. .. -..+.+.++.+|++|...++.+...++ .....+|+||||..... ... .+++...
T Consensus 173 ~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~---------~~~i~vI~NGid~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T PRK10125 173 AHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG---------PGRCRIINNGIDMATEAILAELPPVRETQGKPK 243 (405)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC---------CCCEEEeCCCcCcccccccccccccccCCCCCE
Confidence 1000 00 112245578999999777654433222 23477899999842111 111 1233445
Q ss_pred ccccCCc--hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYT--EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~--~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+|.++. .+.||+..+++|+..+. ++..++++|.|+.. ...+|.++|+..+ ..++.
T Consensus 244 il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~----------------~~~~v~~~g~~~~---~~~l~ 301 (405)
T PRK10125 244 IAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPF----------------TAGNVVNHGFETD---KRKLM 301 (405)
T ss_pred EEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCcc----------------cccceEEecCcCC---HHHHH
Confidence 6777873 46789999999998762 35667777765321 0246899996543 47888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.+|+. +|+||+||.+|+||++++||||||+|||+|++||++|++.++ +|++++|+|+++||+.+
T Consensus 302 ~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 302 SALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS 365 (405)
T ss_pred HHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhcc
Confidence 88986 999999999999999999999999999999999999999875 99999999999999854
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=261.57 Aligned_cols=262 Identities=21% Similarity=0.215 Sum_probs=192.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCC--chhhhhcccccchhhhhhHHHHHHhhCCEEEecCH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS--DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~--~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~ 481 (700)
.++||+|++-......+ ++....++|.+.+.|+-........ ...|.. .|.+ -...++.+|.||++|.
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~------~~~~~~~~D~iI~~S~ 279 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEY------QFSNADYIDFFITATD 279 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHH------HHhchhhCCEEEECCH
Confidence 37999999654443333 3455568899999997543222111 111321 1111 1123677899999998
Q ss_pred HHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 482 ~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
..++.+.+.++++.. ..+.++.+++|++ ...... ........+|+|++.+.||++.+++|+..+....++..+
T Consensus 280 ~~~~~l~~~~~~~~~----~~~ki~viP~g~~--~~~~~~~~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l 353 (500)
T TIGR02918 280 IQNQILKNQFKKYYN----IEPRIYTIPVGSL--DELQYPEQERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTF 353 (500)
T ss_pred HHHHHHHHHhhhhcC----CCCcEEEEcCCCc--ccccCcccccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEE
Confidence 887777666654421 1245678888865 211111 111223568899999999999999999999888888888
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEE
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 640 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVV 640 (700)
.++|.|+ ..+.++++++++++.++|.|+|.+ ++..+++. +|+||+||.+|+||++++||||||+|||
T Consensus 354 ~i~G~G~-----~~~~l~~~i~~~~l~~~V~f~G~~-------~~~~~~~~-adv~v~pS~~Egfgl~~lEAma~G~PVI 420 (500)
T TIGR02918 354 DIYGEGG-----EKQKLQKIINENQAQDYIHLKGHR-------NLSEVYKD-YELYLSASTSEGFGLTLMEAVGSGLGMI 420 (500)
T ss_pred EEEECch-----hHHHHHHHHHHcCCCCeEEEcCCC-------CHHHHHHh-CCEEEEcCccccccHHHHHHHHhCCCEE
Confidence 8888763 236788999999999999999942 24555665 9999999999999999999999999999
Q ss_pred EcCCC-CcccccccCCeEEEECCC----C----HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 641 ATCKG-GPAEIIVNGKSGYHIDPY----H----GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 641 AT~~G-G~~EiI~dg~~G~lv~p~----D----~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|+++ |++|+|++|.+|++++++ | ++++|++|..++ + ++.+++|+++|++.+++
T Consensus 421 ~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 421 GFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIAEG 483 (500)
T ss_pred EecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHHHh
Confidence 99986 899999999999999843 3 888999999987 4 45789999999987653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=254.01 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=179.3
Q ss_pred CCCeEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCccccCCCCc--hhhhhcccccch--hhhhhHHHHHHhhCCEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHF--SCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla-~~~giP~V~t~H~l~~~~~~~~~--~~w~~~~~~y~~--~~~~~~E~~al~~AD~IIt 478 (700)
.++|+||++..... ..+. +..++|.|++.|+.+...+.... ..|. ....|+. ......|+.+++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 38999999764432 2222 34589999999986432211000 0000 0001111 0111247888999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-------cCCCCccccccCCchhhhchhhHH----HH
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-------VSPGADMSIYFPYTEEKRRLKSFH----PE 547 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-------Ip~G~d~~~F~g~~~~~Kgl~~Ll----~A 547 (700)
+|..+++.+++.... ....+.+++||+|.. .+.. .+++....+|.|++...||++.++ ++
T Consensus 179 ~S~~~~~~l~~~~~~-------~~~~v~vipngvd~~--~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~ 249 (397)
T TIGR03087 179 VSRAEAELFRRLAPE-------AAGRITAFPNGVDAD--FFSPDRDYPNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERV 249 (397)
T ss_pred cCHHHHHHHHHhCCC-------CCCCeEEeecccchh--hcCCCccccCCCCCCCcEEEEEEecCCccCHHHHHHHHHHH
Confidence 998877655433211 112467889999842 2211 122335678999999999999887 44
Q ss_pred HHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC-CCCcc
Q 005365 548 IEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFG 626 (700)
Q Consensus 548 i~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fG 626 (700)
+..+....++..++++|.|..+ .+ ++++..++|+|+|+++ ++..+++. +|++|+||. .||+|
T Consensus 250 ~~~l~~~~p~~~l~ivG~g~~~------~~----~~l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~ 312 (397)
T TIGR03087 250 FPAVRARRPAAEFYIVGAKPSP------AV----RALAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQ 312 (397)
T ss_pred HHHHHHHCCCcEEEEECCCChH------HH----HHhccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcc
Confidence 5556666678888888876431 12 2334456799999553 46788886 999999997 59999
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 627 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++||||||+|||+|+.|+. .+...+.+|++++ +|++++|++|.+++ +|++.+++|+++|++++.+
T Consensus 313 ~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~ 379 (397)
T TIGR03087 313 NKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALL----ANPAEREELGQAARRRVLQ 379 (397)
T ss_pred cHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 999999999999999997643 3334456799997 89999999999998 8999999999999999865
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=240.60 Aligned_cols=259 Identities=21% Similarity=0.268 Sum_probs=196.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.++|+||++....... ..+......+.+.+.|+......... ...|+. .+.. ....++++|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 4899999977554433 23344445677888887543221110 111211 1111 11236789999999988
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee---cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCcc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI---VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v---Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~ 559 (700)
.++.+.+.++.. ..+.++++|++. ..+.. .+......+|.|++.+.||++.+++++..+....++..
T Consensus 168 ~~~~l~~~~~~~--------~~v~~ip~g~~~--~~~~~~~~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~ 237 (372)
T cd04949 168 QKQDLQKQFGNY--------NPIYTIPVGSID--PLKLPAQFKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT 237 (372)
T ss_pred HHHHHHHHhCCC--------CceEEEcccccC--hhhcccchhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE
Confidence 877665555421 126678888873 22222 23344567899999999999999999999998888899
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCE
Q 005365 560 EHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 639 (700)
Q Consensus 560 l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPV 639 (700)
++++|.|... ..+.++++++++.++|.|.|+. +++.++++. +|++|+||..|+||++++|||+||+||
T Consensus 238 l~i~G~g~~~-----~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~Pv 305 (372)
T cd04949 238 LDIYGYGDEE-----EKLKELIEELGLEDYVFLKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPV 305 (372)
T ss_pred EEEEEeCchH-----HHHHHHHHHcCCcceEEEcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCE
Confidence 9999887542 4566777889999999999943 357788886 999999999999999999999999999
Q ss_pred EEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 640 FATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 640 VAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
|+|+.+ |+.+++.++.+|++++++|++++|++|..++ +|++.+++|+++|++.+.
T Consensus 306 I~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 306 ISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELL----NDPKLLQKFSEAAYENAE 361 (372)
T ss_pred EEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH
Confidence 999987 8999999999999999999999999999998 899999999999998754
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-24 Score=239.74 Aligned_cols=244 Identities=10% Similarity=0.059 Sum_probs=165.8
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCC-chHH--HHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHH
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSD-GNIV--ASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~-~~lv--a~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
++.+.+... +|||||.+.+. .++. |..+|++++ |+|.++|+.... |... ...+ ...+.... .. .
T Consensus 425 dI~~~L~~f---~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y~~g~-----L~~~llk~-l~-~ 492 (794)
T PLN02501 425 DTSQFIPSK---DADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKREKNGA-----LQAFFVKH-IN-N 492 (794)
T ss_pred HHHHHhhcc---CCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHhcchh-----HHHHHHHH-HH-H
Confidence 444555544 89999997743 3556 888999999 999999986532 2110 0000 00100000 01 1
Q ss_pred HHhh--CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceec-------CCCC----ccccccCCc
Q 005365 469 AMNH--TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-------SPGA----DMSIYFPYT 535 (700)
Q Consensus 469 al~~--AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI-------p~G~----d~~~F~g~~ 535 (700)
.+.. ||.|++.|..... +. . .....+||||. ..|..- ..|. ...+|+|++
T Consensus 493 ~v~r~hcD~VIaPS~atq~-----L~---~-------~vI~nVnGVDt--e~F~P~~r~~~~r~lgi~~~~kgiLfVGRL 555 (794)
T PLN02501 493 WVTRAYCHKVLRLSAATQD-----LP---K-------SVICNVHGVNP--KFLKIGEKVAEERELGQQAFSKGAYFLGKM 555 (794)
T ss_pred HHHHhhCCEEEcCCHHHHH-----hc---c-------cceeecccccc--cccCCcchhHHHHhcCCccccCceEEEEcc
Confidence 2222 8999999944431 11 0 11222369983 222210 0111 236899999
Q ss_pred hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcE
Q 005365 536 EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 615 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDv 615 (700)
.++||+..+++|+..+....++..++|+|.| +. .+.++++++++++ +|.|+|.+.+ ...+|+. +|+
T Consensus 556 a~EKGld~LLeAla~L~~~~pnvrLvIVGDG--P~---reeLe~la~eLgL--~V~FLG~~dd------~~~lyas-aDV 621 (794)
T PLN02501 556 VWAKGYRELIDLLAKHKNELDGFNLDVFGNG--ED---AHEVQRAAKRLDL--NLNFLKGRDH------ADDSLHG-YKV 621 (794)
T ss_pred cccCCHHHHHHHHHHHHhhCCCeEEEEEcCC--cc---HHHHHHHHHHcCC--EEEecCCCCC------HHHHHHh-CCE
Confidence 9999999999999998776666667777655 33 3567788888887 4999995443 2356775 999
Q ss_pred EEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHH
Q 005365 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYW 686 (700)
Q Consensus 616 fV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~ 686 (700)
||+||.+|+||++++||||||+|||+|+.+|. +++.++.+|+++ +|+++++++|.+++ .|+..+
T Consensus 622 FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LL----sd~~~r 685 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEAL----ANEPQP 685 (794)
T ss_pred EEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHH----hCchhh
Confidence 99999999999999999999999999999986 447778888865 69999999999998 565543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-22 Score=218.04 Aligned_cols=322 Identities=14% Similarity=0.085 Sum_probs=206.2
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+|++.. .||.+.... +|++.|.++||+|+ ++|..... .. ...+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~~----~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-EA----RLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-hh----hcccc---
Confidence 898888632 278777777 67777899999999 88864311 00 01111
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
.++++++++.....+. ...++.............+.+.+++. +||+||+|.+..++.+.++++..++|+|++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ik~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKILKRF---KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2567777776432110 00000000111111122233334433 89999999877777777888889999998766
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+.... ..+++.++.+|.++++++.... + .....+.+++||++...
T Consensus 123 ~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---~----------~~~~~i~vi~n~v~~~~ 167 (357)
T PRK00726 123 NAVPG----------------------LANKLLARFAKKVATAFPGAFP---E----------FFKPKAVVTGNPVREEI 167 (357)
T ss_pred CCCcc----------------------HHHHHHHHHhchheECchhhhh---c----------cCCCCEEEECCCCChHh
Confidence 42110 0134567789999999864321 1 22345778889987311
Q ss_pred Ccc---e---ecCCCCccccccCCchhhhchhhHH-HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 517 PKF---N---IVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 517 ~k~---~---vIp~G~d~~~F~g~~~~~Kgl~~Ll-~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... . .++++....+++|+....|+...++ ++++++... + ..+.++|.| +. +.+.+..+ +++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-~~~~~~G~g--~~----~~~~~~~~-~~~~-- 236 (357)
T PRK00726 168 LALAAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-QVIHQTGKG--DL----EEVRAAYA-AGIN-- 236 (357)
T ss_pred hcccchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-EEEEEcCCC--cH----HHHHHHhh-cCCc--
Confidence 000 0 1122333456778777777765555 888777532 2 223344444 32 23344444 6664
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEEC
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHID 661 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~ 661 (700)
|.|+|++ +++..+|+. +|+++.+|- +.+++|||+||+|||++..++ ..+.+.+..+|++++
T Consensus 237 v~~~g~~------~~~~~~~~~-~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 237 AEVVPFI------DDMAAAYAA-ADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred EEEeehH------hhHHHHHHh-CCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 9999954 467888886 999999862 689999999999999997653 235677778999999
Q ss_pred CCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++| +++++++|.+++ +|++.+++|++++++++.
T Consensus 306 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~ 340 (357)
T PRK00726 306 QSDLTPEKLAEKLLELL----SDPERLEAMAEAARALGK 340 (357)
T ss_pred cccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcCC
Confidence 888 999999999998 899999999999988754
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-22 Score=213.89 Aligned_cols=301 Identities=13% Similarity=0.078 Sum_probs=192.7
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhh---HHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPY---LETYTE 392 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~---l~~f~~ 392 (700)
+|+++|.++||+|+ ++|+..... .+.. ...++++++++.....+ .+.....+. ......
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--------~~~~-~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--------KRLV-PKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--------hccc-ccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67788899999999 988532110 0000 11256777777643211 000111111 112223
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+++. +||+||+|....++.+.++++..++|+|+..++... .+ .+++..+.
T Consensus 81 ~l~~~i~~~---~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------~~--------------~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILKKF---KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP--------GL--------------TNKLLSRF 135 (348)
T ss_pred HHHHHHHhc---CCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------cH--------------HHHHHHHH
Confidence 344444444 899999998777777777888889999854332110 00 13456778
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcc------eecCCCCccccccCCchhhhchhh-HH
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKF------NIVSPGADMSIYFPYTEEKRRLKS-FH 545 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~------~vIp~G~d~~~F~g~~~~~Kgl~~-Ll 545 (700)
+|.+++.|+...+ .+. ...++||++...... .-++++....++.|+....|++.. +.
T Consensus 136 ~d~ii~~~~~~~~----~~~------------~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~ 199 (348)
T TIGR01133 136 AKKVLISFPGAKD----HFE------------AVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLGGSQGAKILNELVP 199 (348)
T ss_pred hCeeEECchhHhh----cCC------------ceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEECCchhHHHHHHHHH
Confidence 9999999965543 111 245677775211000 012333445667877766777654 45
Q ss_pred HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCc
Q 005365 546 PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 625 (700)
Q Consensus 546 ~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~f 625 (700)
++++.+... +..++ ...|+++. +.+++.++++++.+.+.|.. .++..+|+. +|++|.+| +
T Consensus 200 ~a~~~l~~~--~~~~~-~~~g~~~~----~~l~~~~~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g- 259 (348)
T TIGR01133 200 KALAKLAEK--GIQIV-HQTGKNDL----EKVKNVYQELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G- 259 (348)
T ss_pred HHHHHHhhc--CcEEE-EECCcchH----HHHHHHHhhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-
Confidence 777776542 34443 34444422 46677777787766555652 156778886 99999875 2
Q ss_pred cHHHHHHHHcCCCEEEcCCCC-------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 626 GLTVVEAMTCGLPTFATCKGG-------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 626 Gl~vlEAMA~GlPVVAT~~GG-------~~EiI~dg~~G~lv~p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
|++++|||+||+|+|+++.+| ..+++.++.+|++++++| +++++++|.+++ +||+.+++|+++++++
T Consensus 260 ~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 260 ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKL 335 (348)
T ss_pred hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhc
Confidence 789999999999999998754 235788899999999876 999999999998 8999999999999987
Q ss_pred HHh
Q 005365 697 IEE 699 (700)
Q Consensus 697 a~e 699 (700)
+.+
T Consensus 336 ~~~ 338 (348)
T TIGR01133 336 AKP 338 (348)
T ss_pred CCc
Confidence 653
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-21 Score=216.83 Aligned_cols=384 Identities=16% Similarity=0.164 Sum_probs=243.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe--
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV-- 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i-- 354 (700)
|||+.+|...+|- -++||..-.+- .|.++|++.|++|+ |+.+.++ .....+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 7899999887753 47899888888 55666799999999 9888776 3222222211110
Q ss_pred ----c-CccceEEEEecC-CC-ccc-cc--cccccc--------ccchhhHHHHHHHHHHHHHHHcC--CCCeEEEEcCC
Q 005365 355 ----Y-GTKYSDILRVPF-RT-EKG-VV--RKWISR--------FEVWPYLETYTEDVAVEIAKELQ--GKPDLIIGNYS 414 (700)
Q Consensus 355 ----~-~~~~v~I~rvp~-~~-~~~-~~--~~~lsr--------~~i~~~l~~f~~~~~~~l~~~~~--~~pDlIh~h~~ 414 (700)
. +.....+..... .. ... ++ ....+| .+-.-.+..|...+...+.. .. ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~-~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPL-GLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhh-cCCCCCCCEEEeecH
Confidence 0 000011111111 00 000 00 111222 11112233333333333212 12 36999999999
Q ss_pred CchHHHHHHHHh----cCCcEEEEecCCccccCCC-Cchhhhhcc-cccc-----hhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 415 DGNIVASLLAHK----LGVTQCTIAHALEKTKYPD-SDIYWKNLD-DKYH-----FSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 415 ~~~lva~lla~~----~giP~V~t~H~l~~~~~~~-~~~~w~~~~-~~y~-----~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
..+++..+++.. ..+|.|+|+|++....... ....|..+. ..|. +..+...++..+..||.|.++|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999884 4789999999985543221 111111111 0111 1122334667788999999999988
Q ss_pred HHhhhhhhcccc----ccccccCCCeEEeecCCCCC--CCc-c---------eec----------------C--CCCccc
Q 005365 484 IAGSKDTVGQYE----SHTAFTLPGLYRVVHGIDVF--DPK-F---------NIV----------------S--PGADMS 529 (700)
Q Consensus 484 ~~~~k~~~~~y~----~~~~~~~p~l~~v~nGId~~--~~k-~---------~vI----------------p--~G~d~~ 529 (700)
+..+. ...|. +......-.+.-|.||+|.. .++ - ... + ......
T Consensus 220 a~Ei~--t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~ 297 (487)
T COG0297 220 AGEIY--TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLF 297 (487)
T ss_pred HHhhc--cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEE
Confidence 76544 12221 00000113467788999842 110 0 011 1 112234
Q ss_pred cccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 530 IYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 530 ~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
.+.+|+..+||++.+++++..++... .++++.|.||.. ....+..+++.+.. ++...- .. ++.+...+
T Consensus 298 ~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~~---le~~~~~la~~~~~--~~~~~i----~~-~~~la~~i 365 (487)
T COG0297 298 GFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDPE---LEEALRALASRHPG--RVLVVI----GY-DEPLAHLI 365 (487)
T ss_pred EEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcHH---HHHHHHHHHHhcCc--eEEEEe----ee-cHHHHHHH
Confidence 56789999999999999999999765 778999999653 44667777776654 444443 11 34566666
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc--------CCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--------GKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--------g~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
...+|++++||++|+||++-++||..|+++|++.+||.++.|.+ ..+||++.+.++++++.+|...+.-...
T Consensus 366 ~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~ 445 (487)
T COG0297 366 YAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRA 445 (487)
T ss_pred HhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhC
Confidence 55799999999999999999999999999999999999999986 4799999999999999999998866666
Q ss_pred CHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLK 695 (700)
Q Consensus 682 dp~~~~~ms~~ar~ 695 (700)
++..|+.+..++..
T Consensus 446 ~~~~w~~~~~~~m~ 459 (487)
T COG0297 446 PPLLWRKVQPNAMG 459 (487)
T ss_pred CHHHHHHHHHhhcc
Confidence 67769998888763
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=211.00 Aligned_cols=312 Identities=14% Similarity=0.124 Sum_probs=200.3
Q ss_pred CcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccc--ccc
Q 005365 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG--VVR 375 (700)
Q Consensus 298 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~--~~~ 375 (700)
.+||.+.++. +|++.|.++||+|+ |+|...... .+... ..++++.++|+....+ .++
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~ 66 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLVP-KAGIPLHTIPVGGLRRKGSLK 66 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhccc-ccCCceEEEEecCcCCCChHH
Confidence 3588888777 67777899999999 988653211 01111 1246778887653211 111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccc
Q 005365 376 KWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDD 455 (700)
Q Consensus 376 ~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~ 455 (700)
.+. ..+.. ......+.+.+++. +||+||+|....++.+.++++..++|+++..|+....
T Consensus 67 ~~~---~~~~~-~~~~~~~~~~i~~~---~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~-------------- 125 (350)
T cd03785 67 KLK---APFKL-LKGVLQARKILKKF---KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG-------------- 125 (350)
T ss_pred HHH---HHHHH-HHHHHHHHHHHHhc---CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc--------------
Confidence 000 00111 11122233444443 8999999887767777788888999998765542110
Q ss_pred ccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--------ecCCCCc
Q 005365 456 KYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--------IVSPGAD 527 (700)
Q Consensus 456 ~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--------vIp~G~d 527 (700)
+ .++..++.+|.|++.|+...+. +....+..++||++. ..+. .+++...
T Consensus 126 ---~-----~~~~~~~~~~~vi~~s~~~~~~-------------~~~~~~~~i~n~v~~--~~~~~~~~~~~~~~~~~~~ 182 (350)
T cd03785 126 ---L-----ANRLLARFADRVALSFPETAKY-------------FPKDKAVVTGNPVRE--EILALDRERARLGLRPGKP 182 (350)
T ss_pred ---H-----HHHHHHHhhCEEEEcchhhhhc-------------CCCCcEEEECCCCch--HHhhhhhhHHhcCCCCCCe
Confidence 0 1334567799999999765431 111346677888863 1111 1233333
Q ss_pred cccccCCchhhhchhh-HHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKS-FHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
..++.++....|+... +.++++.+.. ++..++ ...|+++ .+++.+.++++ .++|.|.|++ +++.
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~-~i~G~g~----~~~l~~~~~~~--~~~v~~~g~~------~~~~ 247 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLR--KRLQVI-HQTGKGD----LEEVKKAYEEL--GVNYEVFPFI------DDMA 247 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEE-EEcCCcc----HHHHHHHHhcc--CCCeEEeehh------hhHH
Confidence 4556666556666654 4477776652 233322 2233332 14455666655 4689999954 4678
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEECCC--CHHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPY--HGEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll 676 (700)
.+|+. +|++|.+|- +++++|||+||+|||+++.++ ..+.+.++.+|++++++ |+++++++|.+++
T Consensus 248 ~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 248 AAYAA-ADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred HHHHh-cCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 88886 999998762 689999999999999987654 34667777899999987 8999999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHHH
Q 005365 677 EKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
.|++.+++|+++|++++.
T Consensus 323 ----~~~~~~~~~~~~~~~~~~ 340 (350)
T cd03785 323 ----SDPERLKAMAEAARSLAR 340 (350)
T ss_pred ----cCHHHHHHHHHHHHhcCC
Confidence 899999999999998764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=220.54 Aligned_cols=275 Identities=17% Similarity=0.159 Sum_probs=175.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCccccCCCCc---hh-------hhhcccccchhhhhhHHHHHHh
Q 005365 403 QGKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD---IY-------WKNLDDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla-~~~giP~V~t~H~l~~~~~~~~~---~~-------w~~~~~~y~~~~~~~~E~~al~ 471 (700)
..++||+|+|.|..+..+..+. +..++|.|+|.|+.....+...+ .+ |.+-.....+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 3579999999999999888888 55789999999988766642111 11 1111122333444556999999
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecC------------------------CCC-
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS------------------------PGA- 526 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp------------------------~G~- 526 (700)
.||.++|+|......++..++.. |+. +++||+++ .+|.-.. -+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~~~--------pd~-ViPNGid~--~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~ 294 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLKRK--------PDV-VLPNGLNV--KKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFD 294 (590)
T ss_pred hCCEEEECChHHHHHHHHHhCCC--------CCE-EeCCCcch--hhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCC
Confidence 99999999998888777776632 233 89999984 2221111 122
Q ss_pred --cccc-c-cCCchh-hhchhhHHHHHHHHhhc----CCCccEE---EEecCCh---h----hHHHHHHHH---------
Q 005365 527 --DMSI-Y-FPYTEE-KRRLKSFHPEIEELLYS----DVENKEH---LKESKDL---E----EQAEMKKMY--------- 578 (700)
Q Consensus 527 --d~~~-F-~g~~~~-~Kgl~~Ll~Ai~~Ll~~----~~~~~l~---i~g~Gd~---e----e~~~~~~l~--------- 578 (700)
++.+ | .||.+. .||++.+++|+..+-.. ..+..++ ++-++.. . ..+-.++++
T Consensus 295 ~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~ 374 (590)
T cd03793 295 LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEK 374 (590)
T ss_pred CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHH
Confidence 2333 4 599988 99999999999887662 2222222 1111100 0 001011111
Q ss_pred ----------------------------------------------------------HHHHHcCCC----Cc--EEEec
Q 005365 579 ----------------------------------------------------------SLIDQYKLN----GQ--FRWIS 594 (700)
Q Consensus 579 ----------------------------------------------------------~li~~l~L~----~~--V~flG 594 (700)
..+.+.+|. ++ |.|++
T Consensus 375 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P 454 (590)
T cd03793 375 IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHP 454 (590)
T ss_pred hhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcc
Confidence 112222232 22 44444
Q ss_pred c---ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccC-CeEEEEC-----
Q 005365 595 S---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNG-KSGYHID----- 661 (700)
Q Consensus 595 ~---~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg-~~G~lv~----- 661 (700)
. ..|.+-..+.+++++. ||+||+||++|+||++++||||||+|||+|+.+|+ .|++.++ ..|+++.
T Consensus 455 ~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~ 533 (590)
T cd03793 455 EFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFK 533 (590)
T ss_pred cccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCcc
Confidence 1 1123334457777775 99999999999999999999999999999999999 5666555 3677776
Q ss_pred --CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 662 --PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 662 --p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+.++++++++|.+++ . .+.++.+.++++
T Consensus 534 ~~~e~v~~La~~m~~~~----~-~~~r~~~~~r~~ 563 (590)
T cd03793 534 SPDESVQQLTQYMYEFC----Q-LSRRQRIIQRNR 563 (590)
T ss_pred chHHHHHHHHHHHHHHh----C-CcHHHHHHHHHH
Confidence 345677777777765 3 356666666655
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=214.23 Aligned_cols=234 Identities=16% Similarity=0.147 Sum_probs=160.7
Q ss_pred EcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHH-HhhCCEEEecCHHHHHhhhh
Q 005365 411 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 411 ~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~a-l~~AD~IIt~S~~~~~~~k~ 489 (700)
.|+....+.++...++.|+|+++++|+... +... .+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISHT--ALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhHH--HHHHHhhccCCEEEECCHHHHHHHHH
Confidence 555555555666666778999999998211 1111 13345 67899999999776654332
Q ss_pred hhcccccccccc-CCCeEEeecCCCCCCCcceecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEec
Q 005365 490 TVGQYESHTAFT-LPGLYRVVHGIDVFDPKFNIVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKES 565 (700)
Q Consensus 490 ~~~~y~~~~~~~-~p~l~~v~nGId~~~~k~~vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~ 565 (700)
. .+. ...+.+|+||+|. +.+...+ .+.....|.++..+.||++.+++|++.+....++..++++|.
T Consensus 112 ~--------g~~~~~~i~vIpNGVd~--~~f~~~~~~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~ 181 (331)
T PHA01630 112 S--------GLKIPQPIYVIPHNLNP--RMFEYKPKEKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSS 181 (331)
T ss_pred c--------CCCCCCCEEEECCCCCH--HHcCCCccccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeC
Confidence 2 111 1246788999983 2222111 111123355677899999999999999987766777777774
Q ss_pred CChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC
Q 005365 566 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 645 (700)
Q Consensus 566 Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G 645 (700)
+..+ ..+ .++.+ +.| .++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.|
T Consensus 182 ~~~~-----~~l------~~~~~---~~~----~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 182 NMLD-----PRL------FGLNG---VKT----PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cccc-----hhh------ccccc---eec----cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 3211 111 12222 234 4667999999997 999999999999999999999999999999999
Q ss_pred CcccccccCCeEEEECC-------------------CCHHHHHHHHHHHHHhccCC---HHHHHHHHHHHHHHH
Q 005365 646 GPAEIIVNGKSGYHIDP-------------------YHGEQAAEILVDFFEKCKAD---PSYWDKISLGGLKRI 697 (700)
Q Consensus 646 G~~EiI~dg~~G~lv~p-------------------~D~eaLAeaI~~ll~~~~~d---p~~~~~ms~~ar~ra 697 (700)
|..|++.++.+|+++++ .|.+++++++.+++ .| ++.++.++.+++...
T Consensus 243 g~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~ 312 (331)
T PHA01630 243 AWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYR 312 (331)
T ss_pred CchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHH
Confidence 99999999988887753 27788888888887 44 345555555554443
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-20 Score=199.84 Aligned_cols=221 Identities=14% Similarity=0.108 Sum_probs=152.7
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEE
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYR 507 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~ 507 (700)
+.|+++|+|+..... .| ...|.+.+.+|++|...++.+++. + +.. . ..
T Consensus 70 ~~~~~tt~~g~~~~~-------------~y---------~~~m~~~~~vIavS~~t~~~L~~~-G-------~~~-~-i~ 117 (335)
T PHA01633 70 KKYFYTTCDGIPNIE-------------IV---------NKYLLQDVKFIPNSKFSAENLQEV-G-------LQV-D-LP 117 (335)
T ss_pred CCceEEeeCCcCchH-------------HH---------HHHHhcCCEEEeCCHHHHHHHHHh-C-------CCC-c-ee
Confidence 468899999864210 11 123556779999997776544432 1 111 1 34
Q ss_pred eecCCCCC--CCcc----------eecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc--cEEEEecCChhhHHH
Q 005365 508 VVHGIDVF--DPKF----------NIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN--KEHLKESKDLEEQAE 573 (700)
Q Consensus 508 v~nGId~~--~~k~----------~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i~g~Gd~ee~~~ 573 (700)
+++|+|.. .+.- ....+.....+|+|++.++||++.+++|++.+....++. ++++.+.|+.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----- 192 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----- 192 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH-----
Confidence 77899842 1110 000022234567899999999999999999998766543 2344444421
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 653 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d 653 (700)
..+++++.++|+|+|+.. .++.+++.++|+. +|+||+||.+|+||++++||||||+|||+|+.||+.|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 134567888999996432 4556899999997 99999999999999999999999999999999999997542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 654 ------------------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 654 ------------------g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
..+||.+++.|++++|++|..+++. .|++.+ +.+++++++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~~---~~~~~~~a~ 322 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREER---SMKLKELAK 322 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhhh---hHHHHHHHH
Confidence 2257889999999999999998631 344333 555555554
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=210.33 Aligned_cols=261 Identities=14% Similarity=0.079 Sum_probs=171.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||.+...........+++.|+|++++.|.+... +...|.. ..+ ..+..++.+|.|++.|...+
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~-------~~~--~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQK-------FKR--FYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHH-------HHH--HHHHHHHhCCEEEECCHHHH
Confidence 8999998754432223344677899999876644211 1112211 111 24567889999999997776
Q ss_pred HhhhhhhccccccccccCCC-eEEeecC-CCCCCCcce------e---cCCCCccccccCCchhhhchhhHHHHHHHHhh
Q 005365 485 AGSKDTVGQYESHTAFTLPG-LYRVVHG-IDVFDPKFN------I---VSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~-l~~v~nG-Id~~~~k~~------v---Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~ 553 (700)
+.+.+. + .+. +.++.|. ++.+..... . ..++....+|.+. ..|+...+++|+..+..
T Consensus 191 ~~l~~~-g---------~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~--~~~~~~~ll~A~~~l~~ 258 (425)
T PRK05749 191 ERFLAL-G---------AKNEVTVTGNLKFDIEVPPELAARAATLRRQLAPNRPVWIAAST--HEGEEELVLDAHRALLK 258 (425)
T ss_pred HHHHHc-C---------CCCCcEecccccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCC--CchHHHHHHHHHHHHHH
Confidence 543321 1 111 3333442 221111000 0 0022233445554 35778889999999887
Q ss_pred cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCc--------CChhHHHHHHHccCcEEEe-CCCCCC
Q 005365 554 SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR--------VRNGELYRYICDTKGAFVQ-PALYEA 624 (700)
Q Consensus 554 ~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~--------v~~~el~~~la~~aDvfV~-PS~~E~ 624 (700)
..++..++++|.| ++. .+++.++++++|+.. +.|.|..... -..+++..+|+. +|++++ +|..|+
T Consensus 259 ~~~~~~liivG~g--~~r--~~~l~~~~~~~gl~~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~ 332 (425)
T PRK05749 259 QFPNLLLILVPRH--PER--FKEVEELLKKAGLSY-VRRSQGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKR 332 (425)
T ss_pred hCCCcEEEEcCCC--hhh--HHHHHHHHHhCCCcE-EEccCCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCC
Confidence 6677666666544 321 256788888888863 5555521100 024689999996 999554 788899
Q ss_pred ccHHHHHHHHcCCCEEEcCC-CCcccccccC-CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 625 FGLTVVEAMTCGLPTFATCK-GGPAEIIVNG-KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg-~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+|.+++|||+||+|||+++. ++..|+++.. .+|++++++|+++++++|..++ +||+.+++|+++|++++.++
T Consensus 333 ~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 333 GGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999864 6677776553 4688888999999999999998 89999999999999998753
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=187.29 Aligned_cols=159 Identities=24% Similarity=0.421 Sum_probs=138.8
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhc-CCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYS-DVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 602 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~ 602 (700)
......+|+|+..+.||++.+++++..+... .++..++++|.++ +...+...++.+++.++|+|+| .++.
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~i~~~~----~~~~ 83 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----YKKELKNLIEKLNLKENIIFLG----YVPD 83 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----HHHHHHHHHHHTTCGTTEEEEE----SHSH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----cccccccccccccccccccccc----cccc
Confidence 3444568899999999999999999998864 5677788887443 3356788889999999999999 5556
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..++ .|
T Consensus 84 ~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l----~~ 158 (172)
T PF00534_consen 84 DELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKLL----ND 158 (172)
T ss_dssp HHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHHH----HH
T ss_pred ccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHHH----CC
Confidence 899999997 9999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred HHHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLKR 696 (700)
Q Consensus 683 p~~~~~ms~~ar~r 696 (700)
++.++.|+++|++|
T Consensus 159 ~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 159 PELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=209.93 Aligned_cols=271 Identities=13% Similarity=0.047 Sum_probs=185.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
+.|+|+.|.+...+++..+.++. +.|+++..|..++.. . .|..+. +...-...+-.+|.|...+...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~----e-~~~~lp-------~~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSS----E-IFRCLP-------WREELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCCh----H-HHhhCC-------ChHHHHHHHhcCCEEEECCHHH
Confidence 57999999988777777776543 579999999765332 1 122111 1001123466699999998665
Q ss_pred HHhhhhhhccc--ccc---ccc---c-CCCeEEeecCCCCCCCcce----------------ecCCCCccccccCCchhh
Q 005365 484 IAGSKDTVGQY--ESH---TAF---T-LPGLYRVVHGIDVFDPKFN----------------IVSPGADMSIYFPYTEEK 538 (700)
Q Consensus 484 ~~~~k~~~~~y--~~~---~~~---~-~p~l~~v~nGId~~~~k~~----------------vIp~G~d~~~F~g~~~~~ 538 (700)
...+.+..... .+. ... . ...+..+++|||. ..+. -..++....+|.+++.+.
T Consensus 199 ~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~ 276 (460)
T cd03788 199 ARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDP--DAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYS 276 (460)
T ss_pred HHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcH--HHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCcccc
Confidence 44332221110 000 000 0 0135677889973 2211 112344567889999999
Q ss_pred hchhhHHHHHHHHhhcCCC----ccEEEEecC---Chhh-HHHHHHHHHHHHHcCCC------CcEEEeccccCcCChhH
Q 005365 539 RRLKSFHPEIEELLYSDVE----NKEHLKESK---DLEE-QAEMKKMYSLIDQYKLN------GQFRWISSQMNRVRNGE 604 (700)
Q Consensus 539 Kgl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G---d~ee-~~~~~~l~~li~~l~L~------~~V~flG~~~d~v~~~e 604 (700)
||+..+++|++.++...++ ..++++|.+ ++++ ....+++.+++++++.. ..|.+++ ..++.++
T Consensus 277 Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~e 353 (460)
T cd03788 277 KGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLY---RSLPREE 353 (460)
T ss_pred CCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEe---CCCCHHH
Confidence 9999999999999887765 345556543 3332 23345555665554321 2355553 1567899
Q ss_pred HHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhcc
Q 005365 605 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCK 680 (700)
Q Consensus 605 l~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~ 680 (700)
+..+|+. ||+||+||..|+||++++||||||+| ||+|+.+|..+. +.+|++++|.|++++|++|.++++
T Consensus 354 l~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~--- 426 (460)
T cd03788 354 LAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALT--- 426 (460)
T ss_pred HHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHc---
Confidence 9999996 99999999999999999999999999 999998888887 468999999999999999999982
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 005365 681 ADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 681 ~dp~~~~~ms~~ar~ra~e 699 (700)
.+++.++.+++++++++.+
T Consensus 427 ~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 427 MPLEERRERHRKLREYVRT 445 (460)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4568889999999988764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=202.75 Aligned_cols=281 Identities=12% Similarity=0.078 Sum_probs=187.4
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
++..+.+.. ..-|+|+.|.+.-.+++..+.++. ..++.+..|..++.. . .| +...+...-...|-.
T Consensus 117 fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~----e-~f-------~~lp~r~~il~gll~ 183 (456)
T TIGR02400 117 FAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSS----E-IY-------RTLPWRRELLEGLLA 183 (456)
T ss_pred HHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCCh----H-HH-------hhCCcHHHHHHHHhc
Confidence 333444432 245899999999888888887664 357778888654332 1 11 111111112346888
Q ss_pred CCEEEecCHHHHHhhhhhhccccc----cccc----cCCCeEEeecCCCCCCCcceec----------------CCCCcc
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYES----HTAF----TLPGLYRVVHGIDVFDPKFNIV----------------SPGADM 528 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~----~~~~----~~p~l~~v~nGId~~~~k~~vI----------------p~G~d~ 528 (700)
||.|-..|+...+.+.......-. .... ..-.+..+++|||. ..|.-. -.+...
T Consensus 184 ~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~v 261 (456)
T TIGR02400 184 YDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDV--DRFAEQAKKPSVQKRIAELRESLKGRKL 261 (456)
T ss_pred CCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCH--HHHHHHhcChhHHHHHHHHHHHcCCCeE
Confidence 999999999887655443321100 0000 01124456677763 222100 012335
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCc----cEEEEecCChhhHHHHHHHHHHHHHc----CC-CC-----cEEEec
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVEN----KEHLKESKDLEEQAEMKKMYSLIDQY----KL-NG-----QFRWIS 594 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~----~l~i~g~Gd~ee~~~~~~l~~li~~l----~L-~~-----~V~flG 594 (700)
.++++|+.+.||+..+++|++.++...|+. .+++++++.....++.+++++.++++ +. .+ .|.+++
T Consensus 262 Il~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~ 341 (456)
T TIGR02400 262 IIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLN 341 (456)
T ss_pred EEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEc
Confidence 678889999999999999999998877653 24444432211112233444444433 11 11 145554
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHH
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAe 670 (700)
..++.+++..+|+. +|+||+||..||||++++||||||+| +|+|+.+|..+.+. +|++++|.|++++|+
T Consensus 342 ---~~~~~~el~aly~a-aDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~ 414 (456)
T TIGR02400 342 ---RSYDREELMALYRA-ADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMAD 414 (456)
T ss_pred ---CCCCHHHHHHHHHh-CcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHH
Confidence 25668999999996 99999999999999999999999999 99999999888883 799999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 671 ILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 671 aI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|.++++ .+++.++++.+++++++.+
T Consensus 415 aI~~aL~---~~~~er~~r~~~~~~~v~~ 440 (456)
T TIGR02400 415 AIARALT---MPLEEREERHRAMMDKLRK 440 (456)
T ss_pred HHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 9999983 5788999999999998765
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=182.98 Aligned_cols=121 Identities=27% Similarity=0.417 Sum_probs=99.4
Q ss_pred ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 531 YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 531 F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
|.|+..+.||++.+++++..+....++..+.++|.+.... ...+.+.+.+..++|.++|.. +..+....+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~-----~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~ 179 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPERE-----YLEELLAALLLLDRVIFLGGL----DPEELLALLL 179 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChH-----HHHHHHHhcCCcccEEEeCCC----CcHHHHHHHh
Confidence 8889999999999999999998777788888888775432 223335667788899999943 2334444444
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEE
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 660 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv 660 (700)
+.+|++++||..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 180 ~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 180 AAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred hcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 35999999999999999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=198.66 Aligned_cols=276 Identities=12% Similarity=0.103 Sum_probs=189.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++ ...++.+-.|..++..-. |+...+...-...|-.||.|-..|...
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~------------fr~lp~r~~il~gll~aDligF~t~~y 214 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI------------YKTLPSRSELLRAVLTADLIGFHTYDF 214 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH------------HhhCCCHHHHHHHHhcCCEEEeCCHHH
Confidence 3489999998888888877765 356888888876544311 111111111234677899999999876
Q ss_pred HHhhhhhhccc---c-cccccc----CCCeEEeecCCCCCCCccee----------------cCCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQY---E-SHTAFT----LPGLYRVVHGIDVFDPKFNI----------------VSPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y---~-~~~~~~----~p~l~~v~nGId~~~~k~~v----------------Ip~G~d~~~F~g~~~~~K 539 (700)
..-+.+..... + ...... ...+..+++||+. ..+.. ...+....++++++.+.|
T Consensus 215 ~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~K 292 (797)
T PLN03063 215 ARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDP--ERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIK 292 (797)
T ss_pred HHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCH--HHHHHHhcChhHHHHHHHHHHhcCCCeEEEEeccccccc
Confidence 65443322111 0 000010 1235577888873 22210 123445677899999999
Q ss_pred chhhHHHHHHHHhhcCCCcc--EEEE--ecCChhhHHHHHHHHHHHHHcC--CCC---cEEEec--cccCcCChhHHHHH
Q 005365 540 RLKSFHPEIEELLYSDVENK--EHLK--ESKDLEEQAEMKKMYSLIDQYK--LNG---QFRWIS--SQMNRVRNGELYRY 608 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~--l~i~--g~Gd~ee~~~~~~l~~li~~l~--L~~---~V~flG--~~~d~v~~~el~~~ 608 (700)
|+..+++|++.++...|+.. ++++ +++...+.++.+++++.++++. +.+ .+.|.| +....++.+++..+
T Consensus 293 Gi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~al 372 (797)
T PLN03063 293 GIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCAL 372 (797)
T ss_pred CHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHH
Confidence 99999999999998877653 3332 2222222234455666666653 322 223333 11135678999999
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
|+. ||+||+||..||||++++||||||+| +|+|..+|.++.+ +.+|++++|.|++++|++|.++++ .+++
T Consensus 373 y~~-ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~ 446 (797)
T PLN03063 373 YAI-TDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDE 446 (797)
T ss_pred HHh-CCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHH
Confidence 996 99999999999999999999999999 9999999999987 567999999999999999999983 4888
Q ss_pred HHHHHHHHHHHHHHhC
Q 005365 685 YWDKISLGGLKRIEEK 700 (700)
Q Consensus 685 ~~~~ms~~ar~ra~e~ 700 (700)
.+++..+++++++.++
T Consensus 447 er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 447 ERETRHRHNFQYVKTH 462 (797)
T ss_pred HHHHHHHHHHHhhhhC
Confidence 8888888888887653
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-18 Score=187.02 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=150.1
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+.+. +||+||++++..+......++..++|+++..++..... . ++.+.
T Consensus 95 ~l~~~l~~~---~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------~------------------~~~~~ 147 (380)
T PRK13609 95 RLKLLLQAE---KPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------I------------------WVHRE 147 (380)
T ss_pred HHHHHHHHh---CcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------c------------------cccCC
Confidence 344445444 89999998766555444444556789886665431110 1 23667
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce------------ecCCCCcc-ccccCCchhhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN------------IVSPGADM-SIYFPYTEEKR 539 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~------------vIp~G~d~-~~F~g~~~~~K 539 (700)
+|.+++.|....+.+.+ +. .....+.. .|+++.. .+. -++++... .++.|+....|
T Consensus 148 ad~i~~~s~~~~~~l~~----~g----i~~~ki~v--~G~p~~~-~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k 216 (380)
T PRK13609 148 VDRYFVATDHVKKVLVD----IG----VPPEQVVE--TGIPIRS-SFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLG 216 (380)
T ss_pred CCEEEECCHHHHHHHHH----cC----CChhHEEE--ECcccCh-HHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCc
Confidence 99999999766543322 11 11111222 2444311 110 01112222 23446666678
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
++..+++++.+ .++..++++++++++ ..+++++++++++ ++|+|+|+++ ++.++|+. +|++|.
T Consensus 217 ~~~~li~~l~~----~~~~~~viv~G~~~~---~~~~l~~~~~~~~--~~v~~~g~~~------~~~~l~~~-aD~~v~- 279 (380)
T PRK13609 217 NVKELCQSLMS----VPDLQVVVVCGKNEA---LKQSLEDLQETNP--DALKVFGYVE------NIDELFRV-TSCMIT- 279 (380)
T ss_pred CHHHHHHHHhh----CCCcEEEEEeCCCHH---HHHHHHHHHhcCC--CcEEEEechh------hHHHHHHh-ccEEEe-
Confidence 88777776643 245566666544432 2355666666554 6799999653 46778886 999985
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcC-CCCc----ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATC-KGGP----AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~-~GG~----~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+...|+++++++|.+++ +||+.+++|+++++
T Consensus 280 ---~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll----~~~~~~~~m~~~~~ 350 (380)
T PRK13609 280 ---KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALL----QDDMKLLQMKEAMK 350 (380)
T ss_pred ---CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 466999999999999999985 5552 223432 455555679999999999998 89999999999987
Q ss_pred HHH
Q 005365 695 KRI 697 (700)
Q Consensus 695 ~ra 697 (700)
+..
T Consensus 351 ~~~ 353 (380)
T PRK13609 351 SLY 353 (380)
T ss_pred HhC
Confidence 654
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=172.30 Aligned_cols=238 Identities=14% Similarity=0.079 Sum_probs=148.0
Q ss_pred CCeEEEEcCCCc-hHHHHHHHH-----hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KPDLIIGNYSDG-NIVASLLAH-----KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~pDlIh~h~~~~-~lva~lla~-----~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
+||+||++++.. ...+..+++ ..++|+++++.++.... .. +..+.+|.+++
T Consensus 100 ~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----~~------------------w~~~~~d~~~~ 156 (382)
T PLN02605 100 KPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----PT------------------WFHKGVTRCFC 156 (382)
T ss_pred CcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----cc------------------cccCCCCEEEE
Confidence 899999965332 222222332 24789988777642110 11 23567999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-CCCcc---------eecCCCCccccccCCchhhhchhhHHHHH
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV-FDPKF---------NIVSPGADMSIYFPYTEEKRRLKSFHPEI 548 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~-~~~k~---------~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai 548 (700)
.|...++.+.+. + +....+.++.++++. +.... .-++++....+|.|+....|++..+++++
T Consensus 157 ~s~~~~~~l~~~-g-------~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l 228 (382)
T PLN02605 157 PSEEVAKRALKR-G-------LEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARAL 228 (382)
T ss_pred CCHHHHHHHHHc-C-------CCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHH
Confidence 997665433222 1 111223333334421 10000 01234445677889888888888888888
Q ss_pred HHHhh----cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 549 EELLY----SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 549 ~~Ll~----~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
..+.. ..++..+.++. |+++ ...+.+.+. ....+|+|+|+++ ++..+|+. +|++|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~vi~-G~~~--~~~~~L~~~----~~~~~v~~~G~~~------~~~~l~~a-aDv~V~~~---- 290 (382)
T PLN02605 229 GDSLYDKNLGKPIGQVVVIC-GRNK--KLQSKLESR----DWKIPVKVRGFVT------NMEEWMGA-CDCIITKA---- 290 (382)
T ss_pred HHhhccccccCCCceEEEEE-CCCH--HHHHHHHhh----cccCCeEEEeccc------cHHHHHHh-CCEEEECC----
Confidence 76541 12334333332 3222 112333332 2345799999653 57888886 99999865
Q ss_pred ccHHHHHHHHcCCCEEEcCC------CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFATCK------GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKISLGGLKRI 697 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~------GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d-p~~~~~ms~~ar~ra 697 (700)
.|++++|||+||+|+|+|+. |+...+ .++..|+.+ +|+++++++|.+++ .| ++.+++|++++++++
T Consensus 291 g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 291 GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA 363 (382)
T ss_pred CcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc
Confidence 48899999999999999983 444444 445567665 69999999999998 66 999999999998876
Q ss_pred H
Q 005365 698 E 698 (700)
Q Consensus 698 ~ 698 (700)
.
T Consensus 364 ~ 364 (382)
T PLN02605 364 R 364 (382)
T ss_pred C
Confidence 4
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-15 Score=165.82 Aligned_cols=223 Identities=13% Similarity=0.017 Sum_probs=145.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
+.+.++++.+.+....++ +...+.++|+.+++..... .... .+ ....|+.++++||.|+++|..
T Consensus 100 ~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~-~~-----------~~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGP-PE-----------LLEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCC-HH-----------HHHHHHHHHHhCCEEEECCHH
Confidence 445666666554443333 3356789999998754322 1110 10 013477889999999999966
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHH
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~L 551 (700)
..+ .+..+. +....++||+|. ..+.. ...+.....|+|++.+.++++.+. + +
T Consensus 164 l~~----~~~~~~-------~~i~~i~ngvd~--~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ll~-~---l 226 (373)
T cd04950 164 LYE----AKRRLN-------PNVVLVPNGVDY--EHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLELLE-A---L 226 (373)
T ss_pred HHH----HHhhCC-------CCEEEcccccCH--HHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHHHH-H---H
Confidence 543 333221 457778999983 22211 112334678999998866654333 3 3
Q ss_pred hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-----CCcc
Q 005365 552 LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-----EAFG 626 (700)
Q Consensus 552 l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-----E~fG 626 (700)
....++..++++|.++... . ... +...++|+|+| .++.+++..|++. +|++++|+.. +++|
T Consensus 227 a~~~p~~~~vliG~~~~~~--~---~~~----~~~~~nV~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P 292 (373)
T cd04950 227 AKARPDWSFVLIGPVDVSI--D---PSA----LLRLPNVHYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSP 292 (373)
T ss_pred HHHCCCCEEEEECCCcCcc--C---hhH----hccCCCEEEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCc
Confidence 3345678888888773211 1 111 11246799999 6667999999997 9999999863 4689
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
++++||||||+|||+|+.++. ++.+..+++ .++|+++++++|.+++
T Consensus 293 ~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~~~~~ai~~~l 338 (373)
T cd04950 293 LKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPEEFVAAIEKAL 338 (373)
T ss_pred chHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHHHHHHHHHHHH
Confidence 999999999999999986544 444444444 4569999999999976
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=165.47 Aligned_cols=235 Identities=14% Similarity=0.090 Sum_probs=150.5
Q ss_pred CC-eEEEEcCCCch---HHHHH--HHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KP-DLIIGNYSDGN---IVASL--LAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~p-DlIh~h~~~~~---lva~l--la~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
++ |+||.+++... +...+ ..++.|+|+|+++|+.++....... + + ...|+..+++||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 56 99999885442 11222 2234479999999998654321110 0 0 1236778999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.|...++.+++ +. +....+..+.+............+......+|.|++.+.+.+ .. ..++.
T Consensus 130 ~S~~~~~~l~~----~g----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~yaG~l~k~~~l-------~~---~~~~~ 191 (333)
T PRK09814 130 HSKKMKDRLVE----EG----LTTDKIIVQGIFDYLNDIELVKTPSFQKKINFAGNLEKSPFL-------KN---WSQGI 191 (333)
T ss_pred CCHHHHHHHHH----cC----CCcCceEecccccccccccccccccCCceEEEecChhhchHH-------Hh---cCCCC
Confidence 99766554432 21 111112222221111000111012233467899998843321 11 23456
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC-CC----------CCCccH
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP-AL----------YEAFGL 627 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P-S~----------~E~fGl 627 (700)
.++++|.|.... ...++|.|+| .++.+|+..+++. |+.+.+ +. .-++|.
T Consensus 192 ~l~i~G~g~~~~--------------~~~~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~ 251 (333)
T PRK09814 192 KLTVFGPNPEDL--------------ENSANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPH 251 (333)
T ss_pred eEEEECCCcccc--------------ccCCCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchH
Confidence 677777663211 2457899999 6667999999985 433332 11 136789
Q ss_pred HHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 628 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 628 ~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++.|+||||+|||+++.++.+++|+++.+|++++ +.++++++|..+ +++.+++|++++++.+.
T Consensus 252 K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 252 KLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKISK 314 (333)
T ss_pred HHHHHHHCCCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 778899988874 45778999999998775
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.6e-16 Score=182.82 Aligned_cols=279 Identities=14% Similarity=0.086 Sum_probs=181.0
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
++..+.+... .-|+|..|.+...+++..+.++. ..++.+-.|..++........+| ...-...|-.
T Consensus 123 fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~------------~~~ll~~ll~ 189 (726)
T PRK14501 123 FAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPW------------REEILEGLLG 189 (726)
T ss_pred HHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCC------------hHHHHHHHhc
Confidence 3334444332 45999999999888888886653 45788888876543311111111 1112346778
Q ss_pred CCEEEecCHHHHHhhhhhhccc---c-ccccccC----CCeEEeecCCCCCCCcce----------------ecCCCCcc
Q 005365 473 TDFIITSTFQEIAGSKDTVGQY---E-SHTAFTL----PGLYRVVHGIDVFDPKFN----------------IVSPGADM 528 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y---~-~~~~~~~----p~l~~v~nGId~~~~k~~----------------vIp~G~d~ 528 (700)
+|.|-..+......+.+..... . ....... ..+..+++|||. .++. -..++...
T Consensus 190 ~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~~ 267 (726)
T PRK14501 190 ADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDY--DKFHNSAQDPEVQEEIRRLRQDLRGRKI 267 (726)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcH--HHHHHHhcCchHHHHHHHHHHHcCCCEE
Confidence 9999988877654433322111 0 0000111 125566788873 2221 11234446
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCC----ccEEEEecC--Ch-h-hHHHHHHHHHHHHHcC----C---CCcEEEe
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVE----NKEHLKESK--DL-E-EQAEMKKMYSLIDQYK----L---NGQFRWI 593 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G--d~-e-e~~~~~~l~~li~~l~----L---~~~V~fl 593 (700)
.++++|+...||+..+++|++.++...|+ ..+++++.+ ++ + ..+..+++.+++.+.+ . .+-+.|.
T Consensus 268 il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~ 347 (726)
T PRK14501 268 ILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFY 347 (726)
T ss_pred EEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEe
Confidence 77899999999999999999999887775 345666544 22 2 1223334444444432 1 1223455
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHc-----CCCEEEcCCCCcccccccCCeEEEECCCCHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~-----GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaL 668 (700)
| .++.+++..+|+. ||+||+||..||||++++||||| |+||++...|+..+++ .|++++|.|++++
T Consensus 348 ~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~l 418 (726)
T PRK14501 348 R----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGI 418 (726)
T ss_pred C----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHH
Confidence 6 6678999999996 99999999999999999999999 5577777888888876 3899999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|++|.+++. .+++.+.+..+++++++.+
T Consensus 419 a~ai~~~l~---~~~~e~~~r~~~~~~~v~~ 446 (726)
T PRK14501 419 AAAIKRALE---MPEEEQRERMQAMQERLRR 446 (726)
T ss_pred HHHHHHHHc---CCHHHHHHHHHHHHHHHHh
Confidence 999999982 2344555555677777653
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.2e-15 Score=164.42 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=148.2
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+.+. +||+||++.+...+.....++..++|+++...+... ...| ..+.
T Consensus 95 ~l~~~l~~~---kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~------~~~w------------------~~~~ 147 (391)
T PRK13608 95 KLINLLIKE---KPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRL------HKNW------------------ITPY 147 (391)
T ss_pred HHHHHHHHh---CcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCc------cccc------------------ccCC
Confidence 444555554 899999976554433333334568898764443210 0112 2456
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce------------ecCCCCcc-ccccCCchhhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN------------IVSPGADM-SIYFPYTEEKR 539 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~------------vIp~G~d~-~~F~g~~~~~K 539 (700)
+|.+++.|+..++.+.+. + ++.-...+.|+++.. .+. -++++... .++.|+....|
T Consensus 148 ~d~~~v~s~~~~~~l~~~-g---------i~~~ki~v~GiPv~~-~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k 216 (391)
T PRK13608 148 STRYYVATKETKQDFIDV-G---------IDPSTVKVTGIPIDN-KFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSK 216 (391)
T ss_pred CCEEEECCHHHHHHHHHc-C---------CCHHHEEEECeecCh-HhcccccHHHHHHHcCCCCCCCEEEEECCCcccch
Confidence 999999997765543321 1 111112223444311 111 01122222 34578888789
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
++..+++++. ...++..++++++++.+ ..+++. +.++..++|.|+|++ +++..+|+. ||++|.
T Consensus 217 ~~~~li~~~~---~~~~~~~~vvv~G~~~~---l~~~l~---~~~~~~~~v~~~G~~------~~~~~~~~~-aDl~I~- 279 (391)
T PRK13608 217 GFDTMITDIL---AKSANAQVVMICGKSKE---LKRSLT---AKFKSNENVLILGYT------KHMNEWMAS-SQLMIT- 279 (391)
T ss_pred hHHHHHHHHH---hcCCCceEEEEcCCCHH---HHHHHH---HHhccCCCeEEEecc------chHHHHHHh-hhEEEe-
Confidence 9988887752 23345556555433321 122333 333445689999964 357888886 999997
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcCC-CC----cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATCK-GG----PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~~-GG----~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
.+.|+++.|||+||+|+|+++. +| ....+.+...|+.+ +|+++++++|.+++ +|++.+++|+++++
T Consensus 280 ---k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~l~~~i~~ll----~~~~~~~~m~~~~~ 350 (391)
T PRK13608 280 ---KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEEAIKIVASLT----NGNEQLTNMISTME 350 (391)
T ss_pred ---CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 3579999999999999999963 33 22334455566654 59999999999998 89999999999998
Q ss_pred HHHH
Q 005365 695 KRIE 698 (700)
Q Consensus 695 ~ra~ 698 (700)
+.+.
T Consensus 351 ~~~~ 354 (391)
T PRK13608 351 QDKI 354 (391)
T ss_pred HhcC
Confidence 8653
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=6e-15 Score=161.38 Aligned_cols=256 Identities=13% Similarity=0.108 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH-
Q 005365 391 TEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI- 468 (700)
Q Consensus 391 ~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~- 468 (700)
...+.+.+.+. +||+||+|. +...+.+.+++++.|+|++++-++. .+. .....|... . .+.
T Consensus 75 ~~~l~~~l~~~---~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~--~~~~~~~~~------~-----~r~~ 137 (365)
T TIGR00236 75 LEGLEELLLEE---KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTG--DRYSPMPEE------I-----NRQL 137 (365)
T ss_pred HHHHHHHHHHc---CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcC--CCCCCCccH------H-----HHHH
Confidence 34455555555 899999986 4556778889999999998765443 110 000011100 0 112
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----C-ccee---cCCCCccccccC-C-ch
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----P-KFNI---VSPGADMSIYFP-Y-TE 536 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~-k~~v---Ip~G~d~~~F~g-~-~~ 536 (700)
..+.+|.++++|...++.+.+. | .....+..+.|++ |... . +-.+ ........++.+ + ..
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~~-G-------~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~ 209 (365)
T TIGR00236 138 TGHIADLHFAPTEQAKDNLLRE-N-------VKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRREN 209 (365)
T ss_pred HHHHHHhccCCCHHHHHHHHHc-C-------CCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhh
Confidence 2335899999997766544321 2 1112355666664 3100 0 0000 011112233333 2 23
Q ss_pred hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 537 EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
..|++..+++++.++....++..+++.+.++... .+. +.+.++..++|.|+| .+...++..++++ +|++
T Consensus 210 ~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~---~~~---~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~v 278 (365)
T TIGR00236 210 VGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVV---REP---LHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLI 278 (365)
T ss_pred hhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHH---HHH---HHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEE
Confidence 4588999999999987666666666665544321 122 333445667899998 5556788888887 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+.+| |..++|||+||+|||++ +.|+..|++.+| +|++++ .|++++++++..++ +|++.+++|++++
T Consensus 279 v~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d~~~i~~ai~~ll----~~~~~~~~~~~~~ 345 (365)
T TIGR00236 279 LTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TDKENITKAAKRLL----TDPDEYKKMSNAS 345 (365)
T ss_pred EECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CCHHHHHHHHHHHH----hChHHHHHhhhcC
Confidence 9987 66789999999999996 778899998876 566664 79999999999998 7999888887654
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.4e-15 Score=153.85 Aligned_cols=268 Identities=19% Similarity=0.224 Sum_probs=181.3
Q ss_pred CeEEEEcCCCchH---HHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 406 PDLIIGNYSDGNI---VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 406 pDlIh~h~~~~~l---va~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
+|++|.+...... .........+.+.+...|.............-. ...... .............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLL--LGLLRL-LLKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhh--HHHHHH-HHHHHHHhccccccEEEECCHH
Confidence 5999986644433 344555566788888888775433211110000 000000 0000011112247888888866
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCc---ceecCCC-CccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK---FNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k---~~vIp~G-~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.....+..... .....++++++...-. +.+.+.. ....+|+|+..+.|++..+++++..+....++.
T Consensus 161 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~ 231 (381)
T COG0438 161 LKELLEALGVP---------NKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDI 231 (381)
T ss_pred HHHHHHHhCCC---------CCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCe
Confidence 52221111110 1345566777632111 2222222 256789999999999999999999998766556
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 638 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP 638 (700)
.+.++|.++.. .+.+.+++.+++..+.|.|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|
T Consensus 232 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~p 302 (381)
T COG0438 232 KLVIVGDGPER----REELEKLAKKLGLEDNVKFLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTP 302 (381)
T ss_pred EEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCc
Confidence 77888877542 234555778888888899999 4445788888876 99999999999999999999999999
Q ss_pred EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 639 TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 639 VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
||+|+.++..|++.++.+|+++++.|++++++++..++ ++++.++.+++.+++++.
T Consensus 303 vi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~ 358 (381)
T COG0438 303 VIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLL----EDPELREELGEAARERVE 358 (381)
T ss_pred EEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHH
Confidence 99999999999999887899888778999999999998 777888888876665553
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-15 Score=160.58 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=148.3
Q ss_pred HHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
+.+.+++. +||+||++.+. ........+++.|+|+++..+.. .|..... .. +...+.
T Consensus 77 ~~~~l~~~---kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~---~~------~~~~~~ 134 (380)
T PRK00025 77 LKRRLLAE---PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG---RA------FKIAKA 134 (380)
T ss_pred HHHHHHHc---CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch---HH------HHHHHH
Confidence 44444444 89999997543 22222334566799988765432 1110000 00 123667
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC------c------ceecCCCCccc-cccC-Cchhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP------K------FNIVSPGADMS-IYFP-YTEEK 538 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~------k------~~vIp~G~d~~-~F~g-~~~~~ 538 (700)
+|.|+++|+...+.+ .++. .+ .++.|.++.+. + +. ++++.... ++.| +....
T Consensus 135 ~d~i~~~~~~~~~~~----~~~g------~~---~~~~G~p~~~~~~~~~~~~~~~~~l~-~~~~~~~il~~~gsr~~~~ 200 (380)
T PRK00025 135 TDHVLALFPFEAAFY----DKLG------VP---VTFVGHPLADAIPLLPDRAAARARLG-LDPDARVLALLPGSRGQEI 200 (380)
T ss_pred HhhheeCCccCHHHH----HhcC------CC---eEEECcCHHHhcccccChHHHHHHcC-CCCCCCEEEEECCCCHHHH
Confidence 899999996654422 2111 11 12233322110 0 11 11222222 2333 23333
Q ss_pred -hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 539 -RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-KLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 539 -Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
+.+..++++++.+....++..++++++ +++ ..+++.+.++++ ++. +.+.. +++..+|+. +|++
T Consensus 201 ~~~~~~l~~a~~~l~~~~~~~~~ii~~~-~~~---~~~~~~~~~~~~~~~~--v~~~~--------~~~~~~~~~-aDl~ 265 (380)
T PRK00025 201 KRLLPPFLKAAQLLQQRYPDLRFVLPLV-NPK---RREQIEEALAEYAGLE--VTLLD--------GQKREAMAA-ADAA 265 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecC-Chh---hHHHHHHHHhhcCCCC--eEEEc--------ccHHHHHHh-CCEE
Confidence 346788899988876666666666543 232 224556666665 543 55542 467888886 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-----------------CCCCcccccccCC--eEEEECCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEIIVNGK--SGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-----------------~~GG~~EiI~dg~--~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
|.+| |.+.+|||+||+|+|++ +.+++++++.++. .+++.+..|++++++++.+++
T Consensus 266 v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll- 339 (380)
T PRK00025 266 LAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLL- 339 (380)
T ss_pred EECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHh-
Confidence 9997 88889999999999987 5677788887764 557778889999999999998
Q ss_pred hccCCHHHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLGGL 694 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ar 694 (700)
+|++.+++|++++.
T Consensus 340 ---~~~~~~~~~~~~~~ 353 (380)
T PRK00025 340 ---ADGARRQALLEGFT 353 (380)
T ss_pred ---cCHHHHHHHHHHHH
Confidence 89999999999864
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-13 Score=141.43 Aligned_cols=272 Identities=17% Similarity=0.166 Sum_probs=181.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCcccc--------CCCC-chhhhhcccccchhhhhhHHHHHHhhC
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTK--------YPDS-DIYWKNLDDKYHFSCQFTADLIAMNHT 473 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~--------~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~A 473 (700)
+..||+.+-....+- .-...++..++|++.-+|-....+ .+.+ -..|.++.-.-.|++. -..+-..|
T Consensus 148 r~~Pdi~IDtMGY~f-s~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G~~a 223 (465)
T KOG1387|consen 148 RFPPDIFIDTMGYPF-SYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAGSKA 223 (465)
T ss_pred hCCchheEecCCCcc-hhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhccccc
Confidence 348999887442221 122344467899999999432111 0011 2223322111111111 12345689
Q ss_pred CEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc--ceecCCCCccccccCCchhhhchhhHHHHHHHH
Q 005365 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK--FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (700)
Q Consensus 474 D~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k--~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~L 551 (700)
|.++++|.....-++..++.. ...+|++..++.+-+ +..-.......++.+..+|+|+.. +++..+..
T Consensus 224 d~vm~NssWT~nHI~qiW~~~---------~~~iVyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 224 DIVMTNSSWTNNHIKQIWQSN---------TCSIVYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred eEEEecchhhHHHHHHHhhcc---------ceeEEcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 999999977654444444321 233444444421111 111011223456788899999988 44433332
Q ss_pred hhcC------CCccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 552 LYSD------VENKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 552 l~~~------~~~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
.... +..++.++|+--+ ++.+..+.|++++++++++++|.|.- .++.+++..++.. |.+.|+.-+.|-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEH 368 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEH 368 (465)
T ss_pred HhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhh
Confidence 2222 3467888887544 34567789999999999999999987 6788999999997 999999999999
Q ss_pred ccHHHHHHHHcCCCEEEcCCCCc-cccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFATCKGGP-AEIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~GG~-~EiI~d---g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
||+.|+|+||+|+-.|+.+.||+ -+||.+ ..+||+.+ +.++.|++|.++.. .|++.+..|+++||..+.
T Consensus 369 FGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~~ 441 (465)
T KOG1387|consen 369 FGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSLA 441 (465)
T ss_pred cchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 566663 34799985 67889999999984 789989999999998765
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-13 Score=150.08 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=154.6
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ...+.+..+++..|+|++++.|+... +... ..|.. . -....
T Consensus 78 ~~l~~~l~~~---~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~-~~~~~-------~-----r~~~~ 139 (363)
T cd03786 78 IGLEAVLLEE---KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRG-MPDEE-------N-----RHAID 139 (363)
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCC-CCchH-------H-----HHHHH
Confidence 3444555554 8999999863 34566778888899999876665321 1001 01110 0 11235
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----C--cc----eecCCCCccccccCCchh-
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----P--KF----NIVSPGADMSIYFPYTEE- 537 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~--k~----~vIp~G~d~~~F~g~~~~- 537 (700)
+.+|.++++|...++.+. ++ +.....++.+.|++ +... . .. .-+++..-..++.++...
T Consensus 140 ~~ad~~~~~s~~~~~~l~----~~----G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~ 211 (363)
T cd03786 140 KLSDLHFAPTEEARRNLL----QE----GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENV 211 (363)
T ss_pred HHhhhccCCCHHHHHHHH----Hc----CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCcccc
Confidence 678999999977654332 22 11222344555653 3110 0 00 011121112335555543
Q ss_pred --hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 538 --KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 538 --~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L-~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
.|++..++++++.+... ++.+++.++++. .+.+++.++++++ .++|+|+| .....++..+++. ||
T Consensus 212 ~~~k~~~~l~~al~~l~~~----~~~vi~~~~~~~---~~~l~~~~~~~~~~~~~v~~~~----~~~~~~~~~l~~~-ad 279 (363)
T cd03786 212 DDGEQLEEILEALAELAEE----DVPVVFPNHPRT---RPRIREAGLEFLGHHPNVLLIS----PLGYLYFLLLLKN-AD 279 (363)
T ss_pred CChHHHHHHHHHHHHHHhc----CCEEEEECCCCh---HHHHHHHHHhhccCCCCEEEEC----CcCHHHHHHHHHc-Cc
Confidence 68999999999888532 345555444432 2456666777776 67899998 4445788888886 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPY-HGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++|.||. | ++.|||+||+|||+++. +..++.+++| ..+..+ |+++++++|.+++ +|+..+.+|
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 280 LVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTDPEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred EEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCCHHHHHHHHHHHh----cCchhhhcC
Confidence 9999984 4 47999999999999964 4466766544 434333 7999999999998 788777665
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.3e-13 Score=154.80 Aligned_cols=204 Identities=10% Similarity=0.118 Sum_probs=159.3
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--ecCCCCccccccC--CchhhhchhhH
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--IVSPGADMSIYFP--YTEEKRRLKSF 544 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--vIp~G~d~~~F~g--~~~~~Kgl~~L 544 (700)
.+..+|.+|+.|.+..+.++.+++++. ....+++|+.+. .+.. .-..-....++++ |+ ++|.++.+
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~-----~~~~v~~Ip~~~----~~~~~~~s~r~~~~~I~v~idrL-~ek~~~~~ 338 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENYRENY-----VEFDISRITPFD----TRLRLGQSQQLYETEIGFWIDGL-SDEELQQI 338 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHhhhcc-----cCCcceeeCccc----eEEecChhhcccceEEEEEcCCC-ChHHHHHH
Confidence 467899999999877777777776421 001122222211 1111 1112234567888 99 99999999
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-----------------------------CcEEEecc
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-----------------------------GQFRWISS 595 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-----------------------------~~V~flG~ 595 (700)
++++..+....|+..+.+.|.++.+ ...+.++++++++++. ++|.|.|+
T Consensus 339 I~av~~~~~~~p~~~L~~~gy~~~~--~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy 416 (519)
T TIGR03713 339 LQQLLQYILKNPDYELKILTYNNDN--DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL 416 (519)
T ss_pred HHHHHHHHhhCCCeEEEEEEecCch--hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec
Confidence 9999999999999999999988642 2345677777777666 79999995
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
+. ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+.++|+||+||+++ +|..+|+++|..+
T Consensus 417 ~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~ 485 (519)
T TIGR03713 417 TN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYY 485 (519)
T ss_pred CC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHH
Confidence 44 3578888887 99999999999999 9999999999999 67789999999999999 6999999999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHh
Q 005365 676 FEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
| .++..|++++..+.+.+.+
T Consensus 486 L----~~~~~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 486 L----DNLKNWNYSLAYSIKLIDD 505 (519)
T ss_pred H----hCHHHHHHHHHHHHHHHHH
Confidence 9 8999999999999987654
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.6e-13 Score=148.89 Aligned_cols=270 Identities=9% Similarity=-0.021 Sum_probs=181.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+...+++..+.++. ..++-+-.|..++..-.....+| ...-...|-.||.|=.-|...
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~------------r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPW------------REQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCc------------hHHHHHHHhcCCeEEeCCHHH
Confidence 45899999988888888886653 35777777866443311111112 111234577899999998877
Q ss_pred HHhhhhhhccccc----cc-----c----------------ccCC----CeEEeecCCCCCCCcceec------------
Q 005365 484 IAGSKDTVGQYES----HT-----A----------------FTLP----GLYRVVHGIDVFDPKFNIV------------ 522 (700)
Q Consensus 484 ~~~~k~~~~~y~~----~~-----~----------------~~~p----~l~~v~nGId~~~~k~~vI------------ 522 (700)
..-+.+.....-. .. . .... .+-.++.|||. .+|.-.
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~--~~f~~~~~~~~~~~~~~~ 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDP--ERIRSALAAASIREMMER 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecH--HHHHHHhcCchHHHHHHH
Confidence 6544443321100 00 0 0000 13445566662 222110
Q ss_pred ----CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc----cEEEEecCChh----hHHHHHHHHHHHHHc------
Q 005365 523 ----SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN----KEHLKESKDLE----EQAEMKKMYSLIDQY------ 584 (700)
Q Consensus 523 ----p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~----~l~i~g~Gd~e----e~~~~~~l~~li~~l------ 584 (700)
-.+....++++|++..||+...+.|++.++...|+. .++.++.+... ..+..+++.+++.+.
T Consensus 278 lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~ 357 (487)
T TIGR02398 278 IRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFAR 357 (487)
T ss_pred HHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCC
Confidence 013345667888999999999999999999988863 56666665432 233445666666654
Q ss_pred -CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEE
Q 005365 585 -KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYH 659 (700)
Q Consensus 585 -~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~l 659 (700)
+..+-+.|.+ .++.+++..+|+. |||++.+|..||++++..|+|||+. |+|.|..+|.++.+. .+++
T Consensus 358 ~~~~pv~~~~~----~v~~~el~alYr~-ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~---~All 429 (487)
T TIGR02398 358 IGWTPLQFFTR----SLPYEEVSAWFAM-ADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELK---GALL 429 (487)
T ss_pred CCCccEEEEcC----CCCHHHHHHHHHh-CCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcC---CCEE
Confidence 3344456666 7788999999996 9999999999999999999999999 999999999987773 4899
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 660 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 660 v~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+|.|++++|++|.+.++ ..++.+++--+.-++++.+
T Consensus 430 VNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v~~ 466 (487)
T TIGR02398 430 TNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAVNY 466 (487)
T ss_pred ECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 999999999999999983 4555555555555555543
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.7e-12 Score=147.88 Aligned_cols=299 Identities=12% Similarity=0.122 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh--------------cCCcEEEEecCCccccC---CCC-------
Q 005365 391 TEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK--------------LGVTQCTIAHALEKTKY---PDS------- 446 (700)
Q Consensus 391 ~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~--------------~giP~V~t~H~l~~~~~---~~~------- 446 (700)
.....+.++ .++.+||+||+|.+.++++...+.+. .+.++++|.|++.+... +..
T Consensus 148 ~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~ 226 (601)
T TIGR02094 148 GIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFG 226 (601)
T ss_pred HHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhh
Confidence 334444443 34569999999999999877765332 13678999999865442 211
Q ss_pred ------chhhhhc---ccccc-hhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 447 ------DIYWKNL---DDKYH-FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 447 ------~~~w~~~---~~~y~-~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
++.|..+ ...+. ...++..-+.++..||.|.++|+...+..++..+.+..-.....-.+..|.|||+...
T Consensus 227 ~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~ 306 (601)
T TIGR02094 227 DYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPT 306 (601)
T ss_pred hhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccc
Confidence 0111110 00000 0012333457899999999999877664443333210000000112567889997521
Q ss_pred --C-------------c---------------------c---------ee----------------------------cC
Q 005365 517 --P-------------K---------------------F---------NI----------------------------VS 523 (700)
Q Consensus 517 --~-------------k---------------------~---------~v----------------------------Ip 523 (700)
+ . + .. +.
T Consensus 307 W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~d 386 (601)
T TIGR02094 307 WVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLD 386 (601)
T ss_pred cCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccC
Confidence 0 0 0 00 12
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhh--cC--CCccEEEEecCChh---hHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLY--SD--VENKEHLKESKDLE---EQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~--~~--~~~~l~i~g~Gd~e---e~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
+.+.++.|+.|+...||.+.++.+++.+.. .. ....+++.|.++.. .++.++.+.+++++...+++|.|+-
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~-- 464 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLE-- 464 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEc--
Confidence 333356678899999999999999888874 21 24667888877643 2345677777777656778999985
Q ss_pred cCcCChhHHHHHHHccCcEEEe-CCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECC------------
Q 005365 597 MNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP------------ 662 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~-PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p------------ 662 (700)
+ -+..+.+.+..++|++++ ||+ +|++|++-+-||..|.+.+++-.|...|.. ++.|||.+.+
T Consensus 465 -~--Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~ 540 (601)
T TIGR02094 465 -N--YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDR 540 (601)
T ss_pred -C--CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccC
Confidence 1 246777777777999999 999 999999999999999999999999999987 6779999984
Q ss_pred CCHHHHHHHHHHHH-HhccCC-----HHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFF-EKCKAD-----PSYWDKISLGGLKR 696 (700)
Q Consensus 663 ~D~eaLAeaI~~ll-~~~~~d-----p~~~~~ms~~ar~r 696 (700)
.|+++|.++|.+.+ ....++ |..|.+|.++|.+.
T Consensus 541 ~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~ 580 (601)
T TIGR02094 541 LDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIAT 580 (601)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhc
Confidence 89999999997655 323343 66799999998875
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.6e-12 Score=130.20 Aligned_cols=350 Identities=12% Similarity=0.064 Sum_probs=208.8
Q ss_pred HHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHH
Q 005365 318 LLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVE 397 (700)
Q Consensus 318 a~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~ 397 (700)
|..|++.|++|+ ++.-..+. +.+.+-..++++|+.+|..+.....++.+ +....-+..|..-+...
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~~p~~~--~l~lKvf~Qfl~Ll~aL 98 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQGGPRVL--FLPLKVFWQFLSLLWAL 98 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCCCchhh--hhHHHHHHHHHHHHHHH
Confidence 456899999999 77644321 22233335678888887654322111100 00111112222111211
Q ss_pred HHHHcCCCCeEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC
Q 005365 398 IAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 474 (700)
Q Consensus 398 l~~~~~~~pDlIh~h~~~~---~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD 474 (700)
+. .+.+|+|....+.+ -.++.+.+...|.+++.+.|++..+. . -...........++..+ .|+..-+.||
T Consensus 99 ~~---~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl-~-l~~~~g~~h~lV~l~~~--~E~~fgk~a~ 171 (444)
T KOG2941|consen 99 FV---LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL-Q-LKLKLGFQHPLVRLVRW--LEKYFGKLAD 171 (444)
T ss_pred Hh---ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH-H-HHhhcCCCCchHHHHHH--HHHHhhcccc
Confidence 11 34799988844322 23566666778999999999875431 0 00000111122233333 3888889999
Q ss_pred EEEecCHHHHHhhhhhhccccccccccCCCe-----------EEeecCC-CCCCCcc------------eecCCCCcc--
Q 005365 475 FIITSTFQEIAGSKDTVGQYESHTAFTLPGL-----------YRVVHGI-DVFDPKF------------NIVSPGADM-- 528 (700)
Q Consensus 475 ~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l-----------~~v~nGI-d~~~~k~------------~vIp~G~d~-- 528 (700)
.-.|+|....+.+.+.++--..+..+.-|.. +.-..|- ..|..+. .-.++|...
T Consensus 172 ~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~ 251 (444)
T KOG2941|consen 172 YNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLL 251 (444)
T ss_pred cchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhc
Confidence 9999998777666666653222222222221 0000000 0000000 000011100
Q ss_pred ----cccc--CCchhhhchhhHHHHHHHH-----hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005365 529 ----SIYF--PYTEEKRRLKSFHPEIEEL-----LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 597 (700)
Q Consensus 529 ----~~F~--g~~~~~Kgl~~Ll~Ai~~L-----l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 597 (700)
.+++ -.-.+..++..|++|+... .+...-+.++++..|.|+.+ +++.+.++++++.. |.+.-
T Consensus 252 ~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlk---E~Y~~~I~~~~~~~-v~~~t--- 324 (444)
T KOG2941|consen 252 PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLK---EKYSQEIHEKNLQH-VQVCT--- 324 (444)
T ss_pred cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchh---HHHHHHHHHhcccc-eeeee---
Confidence 0111 1113456777788888733 22222346777777777654 56778888888864 66553
Q ss_pred CcCChhHHHHHHHccCcEEEeC--CC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 598 NRVRNGELYRYICDTKGAFVQP--AL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 598 d~v~~~el~~~la~~aDvfV~P--S~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
.+...++...+++. ||..|+- |. -=..|++|+....||+||+|-+...+.|+|+||+||++++ |.+++|+.+..
T Consensus 325 pWL~aEDYP~ll~s-aDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~ 401 (444)
T KOG2941|consen 325 PWLEAEDYPKLLAS-ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQM 401 (444)
T ss_pred cccccccchhHhhc-cccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHH
Confidence 37777888888885 9977664 33 2357999999999999999999999999999999999997 89999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHH
Q 005365 675 FFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 675 ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+++..-.|.+..+++.+++++..+
T Consensus 402 lf~~fp~~a~~l~~lkkn~~e~~e 425 (444)
T KOG2941|consen 402 LFKNFPDNADELNQLKKNLREEQE 425 (444)
T ss_pred HHhcCCCCHHHHHHHHHhhHHHHh
Confidence 997666699999999999887643
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-11 Score=145.84 Aligned_cols=272 Identities=11% Similarity=0.066 Sum_probs=179.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. ..++.+-.|..++..-. ++...+...-...|-.||.|=..|...
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Ei------------fr~LP~r~elL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEI------------HRTLPSRSELLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHH------------HhhCCcHHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999888888887664 46888888876544311 111122222234677899999999877
Q ss_pred HHhhhhhhccc---c-ccccccCCC----eEEeecCCCCCCCccee----------------cCCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQY---E-SHTAFTLPG----LYRVVHGIDVFDPKFNI----------------VSPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y---~-~~~~~~~p~----l~~v~nGId~~~~k~~v----------------Ip~G~d~~~F~g~~~~~K 539 (700)
..-+....... + ........+ +...+-||| ..++.- ...|....+.+.+++..|
T Consensus 299 ~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID--~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~K 376 (934)
T PLN03064 299 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGID--SDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIK 376 (934)
T ss_pred HHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEc--HHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeecccccc
Confidence 65433322111 0 001111111 223345665 222211 112444667788899999
Q ss_pred chhhHHHHHHHHhhcCCCcc--EEEE--ec---CChh-hHHHHHHHHHHHHHcC----CCC--cEEEeccccCcCChhHH
Q 005365 540 RLKSFHPEIEELLYSDVENK--EHLK--ES---KDLE-EQAEMKKMYSLIDQYK----LNG--QFRWISSQMNRVRNGEL 605 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~--l~i~--g~---Gd~e-e~~~~~~l~~li~~l~----L~~--~V~flG~~~d~v~~~el 605 (700)
|+...+.|++.++...|+.. ++++ .. ++.+ ......++.+++.+.+ -.+ -|.++. ..++.+++
T Consensus 377 GI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL 453 (934)
T PLN03064 377 GIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHAL 453 (934)
T ss_pred CHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHH
Confidence 99999999999998888753 4443 11 2222 2222233444444433 111 144443 34788999
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
..+|+. |||||.||..|||+++..|||+|+. ++|.|..+|.++.+ +..+++|+|.|++++|++|.+++. .
T Consensus 454 ~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M 527 (934)
T PLN03064 454 CALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---M 527 (934)
T ss_pred HHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---C
Confidence 999996 9999999999999999999999954 44559999988888 556899999999999999999983 5
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 005365 682 DPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~e 699 (700)
+++.+++..+++++++..
T Consensus 528 ~~~Er~~r~~~~~~~V~~ 545 (934)
T PLN03064 528 PEEEREKRHRHNFMHVTT 545 (934)
T ss_pred CHHHHHHHHHHHHhhccc
Confidence 899999999999888764
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-13 Score=125.23 Aligned_cols=127 Identities=19% Similarity=0.221 Sum_probs=92.4
Q ss_pred ccccCCchhhhchhhHHH-HHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHP-EIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~-Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..|.|+..+.|+++.+++ +++.+....++..+++.|.+.. +++++ ..++|+|+| .+ +++..
T Consensus 5 i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------~l~~~-----~~~~v~~~g----~~--~e~~~ 66 (135)
T PF13692_consen 5 IGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------ELKRL-----RRPNVRFHG----FV--EELPE 66 (135)
T ss_dssp EE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------HHCCH-----HHCTEEEE-----S---HHHHH
T ss_pred ccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------HHHHh-----cCCCEEEcC----CH--HHHHH
Confidence 456788889999999999 9999998888888888887532 12222 235899999 44 58999
Q ss_pred HHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 608 YICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 608 ~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 67 ~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 67 ILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp HHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred HHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 9997 999999985 68999999999999999999999 677777666678887 789999999999987
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.2e-10 Score=126.58 Aligned_cols=246 Identities=15% Similarity=0.148 Sum_probs=141.6
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+++. +||+|++....+ ++.....++.+|+|+++.+ +.+-. .|... . -+...
T Consensus 79 ~~~~~~l~~~---kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~--~---------~r~l~ 136 (385)
T TIGR00215 79 KEVVQLAKQA---KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKW--R---------AKKIE 136 (385)
T ss_pred HHHHHHHHhc---CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcc--h---------HHHHH
Confidence 3445555554 899999977433 4445557788999988643 21111 12110 0 12345
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CC-C---CC------cceecCCCCccccccC--Cchh
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DV-F---DP------KFNIVSPGADMSIYFP--YTEE 537 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~-~---~~------k~~vIp~G~d~~~F~g--~~~~ 537 (700)
+.+|.|+++++.+.+.+++ +. .+ ...+-|++ +. . .. ++. ++++....++.| +..+
T Consensus 137 ~~~d~v~~~~~~e~~~~~~----~g------~~-~~~vGnPv~~~~~~~~~~~~~~r~~lg-l~~~~~~Ilvl~GSR~ae 204 (385)
T TIGR00215 137 KATDFLLAILPFEKAFYQK----KN------VP-CRFVGHPLLDAIPLYKPDRKSAREKLG-IDHNGETLALLPGSRGSE 204 (385)
T ss_pred HHHhHhhccCCCcHHHHHh----cC------CC-EEEECCchhhhccccCCCHHHHHHHcC-CCCCCCEEEEECCCCHHH
Confidence 6799999999776543221 11 01 11122222 10 0 00 111 122223334443 4444
Q ss_pred -hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 538 -KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 538 -~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
.|.+..++++++.+....++..+++.+.+ +.. .+.+.++.+.++...+|.+.+ +++..+|+. ||++
T Consensus 205 i~k~~~~ll~a~~~l~~~~p~~~~vi~~~~-~~~---~~~~~~~~~~~~~~~~v~~~~--------~~~~~~l~a-ADl~ 271 (385)
T TIGR00215 205 VEKLFPLFLKAAQLLEQQEPDLRRVLPVVN-FKR---RLQFEQIKAEYGPDLQLHLID--------GDARKAMFA-ADAA 271 (385)
T ss_pred HHHhHHHHHHHHHHHHHhCCCeEEEEEeCC-chh---HHHHHHHHHHhCCCCcEEEEC--------chHHHHHHh-CCEE
Confidence 57888899999988777666666554443 221 134455556666666777765 234567775 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEcC-----------------CCCcccccccCCeEE-EE-CCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFATC-----------------KGGPAEIIVNGKSGY-HI-DPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT~-----------------~GG~~EiI~dg~~G~-lv-~p~D~eaLAeaI~~ll~ 677 (700)
|++| |.+.+|||+||+|+|.+. .-+++.++.+....- +. +.-+++.+++.+.+++
T Consensus 272 V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll- 345 (385)
T TIGR00215 272 LLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLL- 345 (385)
T ss_pred eecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHh-
Confidence 9999 888889999999999872 112233333222111 11 2347889999999998
Q ss_pred hccCCH----HHHHHHHHHH
Q 005365 678 KCKADP----SYWDKISLGG 693 (700)
Q Consensus 678 ~~~~dp----~~~~~ms~~a 693 (700)
.|+ +.++++.+.-
T Consensus 346 ---~~~~~~~~~~~~~~~~~ 362 (385)
T TIGR00215 346 ---ENGLKAYKEMHRERQFF 362 (385)
T ss_pred ---cCCcccHHHHHHHHHHH
Confidence 888 7776665543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.31 E-value=3e-10 Score=133.45 Aligned_cols=295 Identities=12% Similarity=0.124 Sum_probs=193.6
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHH-----HHHHh----------cCCcEEEEecCCcccc---CCCC---------
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVAS-----LLAHK----------LGVTQCTIAHALEKTK---YPDS--------- 446 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~-----lla~~----------~giP~V~t~H~l~~~~---~~~~--------- 446 (700)
..+.+ +.++.+||+||+|.+.++++.. ++... .+..+|+|.|++.+.. ++..
T Consensus 238 gl~~L-r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~ 316 (778)
T cd04299 238 GVRAL-RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPY 316 (778)
T ss_pred HHHHH-HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHH
Confidence 33334 3345689999999999998877 44321 1457899999985433 1110
Q ss_pred ----chhhhhc---ccccc--hhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhcc-ccccccccCCCeEEeecCCCCCC
Q 005365 447 ----DIYWKNL---DDKYH--FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 447 ----~~~w~~~---~~~y~--~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~-y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+..|..+ ..... -...+..-..+++.|+.|.++|+-.-+..++.+.. |..... ..-.+..|.|||+...
T Consensus 317 ~~~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-~~~~i~~ITNGVh~~~ 395 (778)
T cd04299 317 ARELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-EEVPIGHVTNGVHVPT 395 (778)
T ss_pred HHHcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-ccCceeceeCCcchhh
Confidence 1111111 00000 00123334578999999999998764444443332 111100 0113667889987421
Q ss_pred ---Cc----c-e----------------------------------------e-------------------------cC
Q 005365 517 ---PK----F-N----------------------------------------I-------------------------VS 523 (700)
Q Consensus 517 ---~k----~-~----------------------------------------v-------------------------Ip 523 (700)
+. + . . +.
T Consensus 396 W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ld 475 (778)
T cd04299 396 WVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLD 475 (778)
T ss_pred hcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccC
Confidence 00 0 0 0 11
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcC----CCccEEEEecCCh---hhHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSD----VENKEHLKESKDL---EEQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~----~~~~l~i~g~Gd~---ee~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
+.+-++.|..|+...||.+.++..++.+.... ....+++.|.+.. ..+..++.+.+++++....++|.|+-
T Consensus 476 pd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle-- 553 (778)
T cd04299 476 PNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLE-- 553 (778)
T ss_pred CCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEc--
Confidence 22225667888999999999998887775421 2356777776653 22456677777777667778999985
Q ss_pred cCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECC------------
Q 005365 597 MNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP------------ 662 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p------------ 662 (700)
+ -+..+.+.+-..+|++++||+ +|++|++=+-||.-|.+.+++-.|...|.. +|.|||.+.+
T Consensus 554 -~--Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~ 629 (778)
T cd04299 554 -D--YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDA 629 (778)
T ss_pred -C--CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcch
Confidence 2 246777777778999999999 999999999999999999999999999998 7899999988
Q ss_pred CCHHHHHHHHHHHHH-hccC-----CHHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFE-KCKA-----DPSYWDKISLGGLKR 696 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~-~~~~-----dp~~~~~ms~~ar~r 696 (700)
.|+++|.+.|.+-+- ...+ .|..|.+|.+++.+.
T Consensus 630 ~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~ 669 (778)
T cd04299 630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMAT 669 (778)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHh
Confidence 567777777754331 2223 378899999988775
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.8e-10 Score=125.02 Aligned_cols=274 Identities=16% Similarity=0.160 Sum_probs=149.7
Q ss_pred eEEEEcCCCchHHHHHHHH-hcCCcEEEEecCCccccCCCC----------chhhhhcccccchhhhhhHHHHHHhhCCE
Q 005365 407 DLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKYPDS----------DIYWKNLDDKYHFSCQFTADLIAMNHTDF 475 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~-~~giP~V~t~H~l~~~~~~~~----------~~~w~~~~~~y~~~~~~~~E~~al~~AD~ 475 (700)
=+.|+|-|..+....++.+ +..|..|+|.|+.-..++... ...+.+....+....+...|+.+...||.
T Consensus 145 ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~Adv 224 (633)
T PF05693_consen 145 VIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADV 224 (633)
T ss_dssp EEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSE
T ss_pred EEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCe
Confidence 3468899988764443332 235778999998643322111 11122223334445566779999999999
Q ss_pred EEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee------------------c----CCCC----ccc
Q 005365 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI------------------V----SPGA----DMS 529 (700)
Q Consensus 476 IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v------------------I----p~G~----d~~ 529 (700)
..|+|...+...+..++.. |+ .+++||+++. ++.. + .... |..
T Consensus 225 FTTVSeITa~Ea~~LL~r~--------pD-vV~pNGl~v~--~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~t 293 (633)
T PF05693_consen 225 FTTVSEITAKEAEHLLKRK--------PD-VVTPNGLNVD--KFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKT 293 (633)
T ss_dssp EEESSHHHHHHHHHHHSS----------S-EE----B-GG--GTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGE
T ss_pred eeehhhhHHHHHHHHhCCC--------CC-EEcCCCcccc--ccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccce
Confidence 9999988887777777643 22 4568998742 1110 0 0111 112
Q ss_pred cc---cCCch-hhhchhhHHHHHHHHhhc----CCCccEEE---------------------------------------
Q 005365 530 IY---FPYTE-EKRRLKSFHPEIEELLYS----DVENKEHL--------------------------------------- 562 (700)
Q Consensus 530 ~F---~g~~~-~~Kgl~~Ll~Ai~~Ll~~----~~~~~l~i--------------------------------------- 562 (700)
+| .||.+ ..||.+.+++|+..|-.. ..+..++.
T Consensus 294 l~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~ 373 (633)
T PF05693_consen 294 LYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKR 373 (633)
T ss_dssp EEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22 24443 359999999999887532 22332222
Q ss_pred -------------------------------------------EecCChhhHHHHHHHHHHHHHcCCC----Cc--EEEe
Q 005365 563 -------------------------------------------KESKDLEEQAEMKKMYSLIDQYKLN----GQ--FRWI 593 (700)
Q Consensus 563 -------------------------------------------~g~Gd~ee~~~~~~l~~li~~l~L~----~~--V~fl 593 (700)
.-..+. . +.+-..+.++++. ++ |.|+
T Consensus 374 ~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~-~----DpILn~irr~~L~N~~~drVKVIF~ 448 (633)
T PF05693_consen 374 LFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDS-N----DPILNMIRRLGLFNNPEDRVKVIFH 448 (633)
T ss_dssp HHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTT-T-----HHHHHHHHTT----TT-SEEEEE-
T ss_pred HHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCc-c----CHHHHHHHhCCCCCCCCCceEEEEe
Confidence 111111 1 2334445556663 34 4555
Q ss_pred cc---ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc-----CCeEEEE-C--C
Q 005365 594 SS---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN-----GKSGYHI-D--P 662 (700)
Q Consensus 594 G~---~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d-----g~~G~lv-~--p 662 (700)
+. ..|.+-+-+.+.++.. +|+.|+||+||++|.|.+|+.++|+|.|+|+..|..-.+.+ ...|+.| + .
T Consensus 449 P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~ 527 (633)
T PF05693_consen 449 PEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRD 527 (633)
T ss_dssp -S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSS
T ss_pred eccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCC
Confidence 42 1233434567788886 99999999999999999999999999999999998765553 3456554 2 3
Q ss_pred CCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFEK-CKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~-~~~dp~~~~~ms~~ar~ra 697 (700)
.+.++.+++|.+.+.+ |..++..+..++.++.+.+
T Consensus 528 ~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS 563 (633)
T PF05693_consen 528 KNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS 563 (633)
T ss_dssp S-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4666666666655544 4567777777777776544
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-11 Score=114.68 Aligned_cols=146 Identities=14% Similarity=0.203 Sum_probs=79.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccc
Q 005365 300 GGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWIS 379 (700)
Q Consensus 300 GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ls 379 (700)
||.++|+. +|+++|+++||+|+ |+|+..++.. .... ..++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 79999999 67777899999999 9986644321 1111 23688888887654210
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccch
Q 005365 380 RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHF 459 (700)
Q Consensus 380 r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~ 459 (700)
...+. +...+.+.+ .....+||+||+|.+..++++.++++..++|+|++.|+...... ..|.. .+
T Consensus 54 -~~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~-----~~ 118 (160)
T PF13579_consen 54 -LRLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR-----RL 118 (160)
T ss_dssp -GGHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-----HH
T ss_pred -hhhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh-----HH
Confidence 01111 112223333 22345899999998766667766665789999999998542221 12211 11
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHHhhhh
Q 005365 460 SCQFTADLIAMNHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 460 ~~~~~~E~~al~~AD~IIt~S~~~~~~~k~ 489 (700)
.. ..++..++.||.|+++|+..++.+.+
T Consensus 119 ~~--~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 119 YR--WLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp HH--HHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred HH--HHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 12 23778899999999999777665444
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=112.23 Aligned_cols=166 Identities=17% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccccccc
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (700)
+..||.++++. +|+++|+++||+|+ |+|....+..... . .......+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~----~-------~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE----L-------VKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST----E-------EEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh----c-------cceeeeeecccc------
Confidence 45699999999 67777799999999 9986654432111 0 011111111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccc--cCCCCchhhhhcc
Q 005365 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKT--KYPDSDIYWKNLD 454 (700)
Q Consensus 377 ~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~--~~~~~~~~w~~~~ 454 (700)
....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ..... .|
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~--~~---- 123 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSK--LS---- 123 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTS--CC----
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccc--cc----
Confidence 01111122334455566666 899999988665544444444 99999999987631 10000 00
Q ss_pred cccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccc
Q 005365 455 DKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (700)
Q Consensus 455 ~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F 531 (700)
.+.... ...+....+.+|.+|++|...++.+.+ ++ ++ ..++.+|+||+|+..|
T Consensus 124 -~~~~~~-~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~-------------------~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 124 -PYSYLN-FRIERKLYKKADRIIAVSESTKDELIK-FG-------------------IP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp -CHHHHH-HCTTHHHHCCSSEEEESSHHHHHHHHH-HT-----------------------SS-EEE----B-CCCH
T ss_pred -hhhhhh-hhhhhhHHhcCCEEEEECHHHHHHHHH-hC-------------------Cc--ccCCEEEECCccHHHc
Confidence 000000 111334578999999999877765555 43 22 4577788888887766
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-09 Score=117.98 Aligned_cols=187 Identities=13% Similarity=0.080 Sum_probs=131.1
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHH
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEE 550 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~ 550 (700)
++.|.||++|+++.+.+++++.. ....+..|.-+. ++ ++ +-+ ......+.++ ....+++++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~--~~~~~~ip~g~i-~~-~~----~~~---r~~~~~l~~t-------~s~~I~~i~~ 299 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN--EYQEQISQLGYL-YP-FK----KDN---KYRKQALILT-------NSDQIEHLEE 299 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc--ccCceEEEEEEE-Ee-ec----ccc---CCcccEEEEC-------CHHHHHHHHH
Confidence 67899999998888877777753 122233333332 11 10 000 0111122222 1678899999
Q ss_pred HhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHH
Q 005365 551 LLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV 630 (700)
Q Consensus 551 Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vl 630 (700)
|....|+..++| |.++.-. .+|.++ +++ ++-+.+.|+.+ ..+-..+.. ||+++-.|..|+|++++.
T Consensus 300 Lv~~lPd~~f~I-ga~te~s----~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~~-~dlyLdin~~e~~~~al~ 365 (438)
T TIGR02919 300 IVQALPDYHFHI-AALTEMS----SKLMSL-DKY--DNVKLYPNITT-----QKIQELYQT-CDIYLDINHGNEILNAVR 365 (438)
T ss_pred HHHhCCCcEEEE-EecCccc----HHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHHh-ccEEEEccccccHHHHHH
Confidence 999999999999 6664411 456666 555 67677777443 245566665 999999999999999999
Q ss_pred HHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 631 EAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 631 EAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
||++.|+|||+.+ .-|+.+++.+ |.+++.+|+++|+++|.+++ .||+.+++.-..-++.
T Consensus 366 eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 366 RAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQREH 425 (438)
T ss_pred HHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence 9999999999985 4567788866 88999999999999999998 8997777654444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-10 Score=100.05 Aligned_cols=80 Identities=21% Similarity=0.362 Sum_probs=75.0
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+++.|+..++++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 45779989999999999999999999999999999999999999998 9999999999998 89999999999999
Q ss_pred HHHHhC
Q 005365 695 KRIEEK 700 (700)
Q Consensus 695 ~ra~e~ 700 (700)
+++.++
T Consensus 75 ~~v~~~ 80 (92)
T PF13524_consen 75 ERVLKR 80 (92)
T ss_pred HHHHHh
Confidence 999853
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-09 Score=104.43 Aligned_cols=165 Identities=19% Similarity=0.209 Sum_probs=107.9
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEec
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~ 355 (700)
|.||+|+...|.|.. .||.|+++. +|+..|+++||+|+ |.|+...... .. .
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~~---~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------KE---F 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------CC---c
Confidence 358999999999853 599999999 88888999999999 9998643211 11 1
Q ss_pred CccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHH-----HcCCCCeEEEEcCCC-chHHHHHHHH--hc
Q 005365 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAK-----ELQGKPDLIIGNYSD-GNIVASLLAH--KL 427 (700)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~-----~~~~~pDlIh~h~~~-~~lva~lla~--~~ 427 (700)
.-.+++++.+|.....+ +..+..++...+.. .-..+.|+||.+... ++++..++.+ +.
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 12368899988765321 11222222221111 111257899987655 5555554443 34
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhc
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVG 492 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~ 492 (700)
|+|++++.|++++.+ .+|.....+|. ...|+.+.+.||.+|+-|....+-+++.++
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHcC
Confidence 779999999997665 46665544442 335889999999999999666554444443
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.9e-07 Score=98.53 Aligned_cols=308 Identities=14% Similarity=0.088 Sum_probs=167.6
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHCCCc-eeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccc--ccc
Q 005365 299 TGGQVVYILDQVRALEDEMLLRIKQQGLD-ITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG--VVR 375 (700)
Q Consensus 299 ~GG~~vyvld~araL~~eLa~~L~~~Ghe-V~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~--~~~ 375 (700)
|||-..-.+ -++++|.++|++ |. ++.....- .+......++.+..++.....+ .++
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~~---------e~~l~~~~~~~~~~I~~~~~~~~~~~~ 68 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDGL---------EAFLVKQYGIEFELIPSGGLRRKGSLK 68 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eecccccc---------eeeeccccCceEEEEecccccccCcHH
Confidence 577555545 678889999996 44 44222110 0111111245666666554322 111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccc
Q 005365 376 KWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDD 455 (700)
Q Consensus 376 ~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~ 455 (700)
++.+- -++......+.+.+++. +||+|++........+.++++.+|+|+++.-.+.... ..|+
T Consensus 69 ~~~~~----~~~~~~~~~a~~il~~~---kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G------~ank---- 131 (357)
T COG0707 69 LLKAP----FKLLKGVLQARKILKKL---KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPG------LANK---- 131 (357)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHc---CCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcc------hhHH----
Confidence 10000 11222233444555555 9999999777777778888999999998866654222 2232
Q ss_pred ccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce----ecC----CCCc
Q 005365 456 KYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN----IVS----PGAD 527 (700)
Q Consensus 456 ~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~----vIp----~G~d 527 (700)
+..+.|+.|.+.-... ..+. +.-..+.-|+++..+-.. .++ .+..
T Consensus 132 ------------~~~~~a~~V~~~f~~~--------~~~~-------~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~~~~~ 184 (357)
T COG0707 132 ------------ILSKFAKKVASAFPKL--------EAGV-------KPENVVVTGIPVRPEFEELPAAEVRKDGRLDKK 184 (357)
T ss_pred ------------HhHHhhceeeeccccc--------cccC-------CCCceEEecCcccHHhhccchhhhhhhccCCCc
Confidence 2244466655544211 1110 000111223332111111 000 1233
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCC-ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVE-NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~-~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
+.+.+|... |...+-+++.++.....+ ..++ .-.|... .+++++.-.+++. ++..++.+ +|.
T Consensus 185 ~ilV~GGS~---Ga~~ln~~v~~~~~~l~~~~~v~-~~~G~~~----~~~~~~~~~~~~~---~~v~~f~~------dm~ 247 (357)
T COG0707 185 TILVTGGSQ---GAKALNDLVPEALAKLANRIQVI-HQTGKND----LEELKSAYNELGV---VRVLPFID------DMA 247 (357)
T ss_pred EEEEECCcc---hhHHHHHHHHHHHHHhhhCeEEE-EEcCcch----HHHHHHHHhhcCc---EEEeeHHh------hHH
Confidence 444444433 333333444433333222 2222 2233321 2344444444444 78887654 478
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEECCCC--HHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~p~D--~eaLAeaI~~ll 676 (700)
++|+. +|+.|.=+ =++|+-|..++|+|+|--.... .+..+++...|..++..+ ++.+++.|.+++
T Consensus 248 ~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~ 322 (357)
T COG0707 248 ALLAA-ADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL 322 (357)
T ss_pred HHHHh-ccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh
Confidence 88886 99998864 3689999999999999864332 234445555677776544 889999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHH
Q 005365 677 EKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra 697 (700)
++|+..++|++++++..
T Consensus 323 ----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 323 ----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred ----cCHHHHHHHHHHHHhcC
Confidence 89999999999988753
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-07 Score=106.24 Aligned_cols=270 Identities=13% Similarity=0.065 Sum_probs=148.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. +.++.+-.|..++.. .. ++...+...-...|-.||.|-..++..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~-----e~-------fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS-----EI-------FRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H-----HH-------HTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH-----HH-------HhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 56999999988888887777664 568888888765433 11 111112212234677899999999887
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccc-----------------------------cccCC
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMS-----------------------------IYFPY 534 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~-----------------------------~F~g~ 534 (700)
..-+.......-... .....-.+.++|- .-++.+.|-|+|.. +=+.+
T Consensus 209 ~~nFl~~~~r~lg~~-~~~~~~~v~~~Gr---~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDr 284 (474)
T PF00982_consen 209 ARNFLSCCKRLLGLE-VDSDRGTVEYNGR---RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDR 284 (474)
T ss_dssp HHHHHHHHHHHS-EE-EEETTE-EEETTE---EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--
T ss_pred HHHHHHHHHHHcCCc-ccCCCceEEECCE---EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 654433332211000 0000000111111 00122233333322 22345
Q ss_pred chhhhchhhHHHHHHHHhhcCCCc--cEEE--EecCChh----hHHHHHHHHHHHHHc----CCCC--cEEEeccccCcC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDLE----EQAEMKKMYSLIDQY----KLNG--QFRWISSQMNRV 600 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~e----e~~~~~~l~~li~~l----~L~~--~V~flG~~~d~v 600 (700)
++..||+..-+.|++.++...|+. ++++ +....+. .....+++.+++.+. |-.+ -|.++- ..+
T Consensus 285 ld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~ 361 (474)
T PF00982_consen 285 LDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIY---RSL 361 (474)
T ss_dssp B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S--
T ss_pred chhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCC
Confidence 677799999999999999988764 2333 2222211 223344455554443 3222 366665 357
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+.++++.+|+. ||+++.+|..+|+.++..|+.+|..+ +|.|...|.++.+.+ ..++|+|.|.+++|++|.+.+
T Consensus 362 ~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL 438 (474)
T PF00982_consen 362 SFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHEAL 438 (474)
T ss_dssp -HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHHHH
Confidence 78999999997 99999999999999999999999876 777888888888854 348999999999999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHHHh
Q 005365 677 EKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ ..++.++..-+.-++.+.+
T Consensus 439 ~---M~~~Er~~r~~~~~~~v~~ 458 (474)
T PF00982_consen 439 T---MPPEERKERHARLREYVRE 458 (474)
T ss_dssp T-----HHHHHHHHHHHHHHHHH
T ss_pred c---CCHHHHHHHHHHHHHHhHh
Confidence 4 5667777766666666654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.3e-09 Score=109.15 Aligned_cols=185 Identities=12% Similarity=0.073 Sum_probs=99.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe--
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV-- 354 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i-- 354 (700)
||+++|....|- -.+||...++- .|+++|+++||+|. |+++.++........ ......
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988652 36799999999 56666799999999 999875321111000 000000
Q ss_pred --------c----------CccceEEEEecCCCcccccccccccccch-----------hhHHHHHHHHHHHHHHHcCCC
Q 005365 355 --------Y----------GTKYSDILRVPFRTEKGVVRKWISRFEVW-----------PYLETYTEDVAVEIAKELQGK 405 (700)
Q Consensus 355 --------~----------~~~~v~I~rvp~~~~~~~~~~~lsr~~i~-----------~~l~~f~~~~~~~l~~~~~~~ 405 (700)
. ..+++.++-+.... +.+|..++ .....|+..+...+. .++.+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~-~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLK-KLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHC-TCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHH-hhCCC
Confidence 0 00234444333221 11122222 112223333333333 34458
Q ss_pred CeEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCCC------Cchhhhh--cccccchhhhhhHHHHHH
Q 005365 406 PDLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPD------SDIYWKN--LDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 406 pDlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~~------~~~~w~~--~~~~y~~~~~~~~E~~al 470 (700)
|||||+|.|.+++++.++.... ++|+|+|+|++....... .+..|.. ....+.+...+...+..+
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999888765 599999999975442111 1112211 011122222333456789
Q ss_pred hhCCEEEecCHHHHHhhhh
Q 005365 471 NHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~ 489 (700)
..||.|+|+|+..++.+..
T Consensus 214 ~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp HHSSEEEESSHHHHHHTTS
T ss_pred HhcCEeeeCCHHHHHHHhC
Confidence 9999999999887764433
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-06 Score=95.20 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=54.7
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-----C----cccccccCCeEEEECC--CCHHHHHHH
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-----G----PAEIIVNGKSGYHIDP--YHGEQAAEI 671 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-----G----~~EiI~dg~~G~lv~p--~D~eaLAea 671 (700)
+++..+|+. ||++|.-+ -+.|+.|++++|+|.|..... + ..+.+.+...|..+.. -+++.++++
T Consensus 244 ~~m~~~~~~-adlvIsr~----G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~ 318 (352)
T PRK12446 244 GELPDILAI-TDFVISRA----GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKH 318 (352)
T ss_pred hhHHHHHHh-CCEEEECC----ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHH
Confidence 467788886 99988863 478999999999999987432 1 2234444445666543 357889999
Q ss_pred HHHHHHhccCCHHHHHH
Q 005365 672 LVDFFEKCKADPSYWDK 688 (700)
Q Consensus 672 I~~ll~~~~~dp~~~~~ 688 (700)
+.+++ .|++.+++
T Consensus 319 l~~ll----~~~~~~~~ 331 (352)
T PRK12446 319 VEELS----HNNEKYKT 331 (352)
T ss_pred HHHHH----cCHHHHHH
Confidence 99887 78766543
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-07 Score=102.10 Aligned_cols=93 Identities=19% Similarity=0.118 Sum_probs=65.3
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.++++|.+.++ ++..+++ . .+|++|.- +-..++.||+++|+|+|.....+ .++.++....|..+
T Consensus 285 ~~~~~v~~~~~----~p~~~ll---~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l 352 (401)
T cd03784 285 DLPDNVRVVDF----VPHDWLL---P-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL 352 (401)
T ss_pred CCCCceEEeCC----CCHHHHh---h-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC
Confidence 35678999984 4455554 4 49999965 23479999999999999987665 34555555678777
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++. +++++++++.+++ ++ ..+++..+.+.
T Consensus 353 ~~~~~~~~~l~~al~~~l----~~-~~~~~~~~~~~ 383 (401)
T cd03784 353 DPRELTAERLAAALRRLL----DP-PSRRRAAALLR 383 (401)
T ss_pred CcccCCHHHHHHHHHHHh----CH-HHHHHHHHHHH
Confidence 665 6899999999987 54 44444444433
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.75 E-value=2e-07 Score=87.27 Aligned_cols=123 Identities=22% Similarity=0.213 Sum_probs=78.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 395 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~ 395 (700)
++++.|+++|++|+ |+|...... .....+++.+++++.... ...+++. + ..+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~~----------~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~-~~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDYE----------KYEIIEGIKVIRLPSPRK-----------SPLNYIK-Y-FRLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCch----------hhhHhCCeEEEEecCCCC-----------ccHHHHH-H-HHHH
Confidence 56667799999999 998732210 111123677888764421 1344443 2 2455
Q ss_pred HHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcC-CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhC
Q 005365 396 VEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (700)
Q Consensus 396 ~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~g-iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~A 473 (700)
+.+.+. +||+||+|...+ ++++.++++..+ +|++++.|+..... ... .. .+..+ ..+.++++|
T Consensus 68 k~ik~~---~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~-------~~~~~--~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKKE---KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KK-------KLKKF--IIKFAFKRA 132 (139)
T ss_pred HHhccC---CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hH-------HHHHH--HHHHHHHhC
Confidence 555554 899999999776 778888888888 99999999864422 110 10 01111 255789999
Q ss_pred CEEEecC
Q 005365 474 DFIITST 480 (700)
Q Consensus 474 D~IIt~S 480 (700)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1e-06 Score=98.61 Aligned_cols=271 Identities=13% Similarity=-0.006 Sum_probs=167.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. ..++.+-.|..++..-.....+| ...-...|-.+|.|=.-|...
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~------------r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPP------------HDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCC------------hHHHHHHHHhCccceeCCHHH
Confidence 34899999988888887776553 45777778876443311111112 111234577899999999877
Q ss_pred HHhhhhhhcccc-----ccccccCC----CeEEeecCCCCCCCcceec---------------CCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQYE-----SHTAFTLP----GLYRVVHGIDVFDPKFNIV---------------SPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y~-----~~~~~~~p----~l~~v~nGId~~~~k~~vI---------------p~G~d~~~F~g~~~~~K 539 (700)
..-+.+...... ........ .+...+-|||. ..+.-. -.|....+=+.|++..|
T Consensus 191 ~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~--~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytK 268 (474)
T PRK10117 191 RLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEP--DEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSK 268 (474)
T ss_pred HHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcH--HHHHHHhhchHHHHHHHHHHHcCCCeEEEEeccccccc
Confidence 654433332110 00000000 01122334441 111100 01111122223667779
Q ss_pred chhhHHHHHHHHhhcCCCc--cEEE--EecCChhh----HHHHHHHHHHHHHcCC----CC--cEEEeccccCcCChhHH
Q 005365 540 RLKSFHPEIEELLYSDVEN--KEHL--KESKDLEE----QAEMKKMYSLIDQYKL----NG--QFRWISSQMNRVRNGEL 605 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~ee----~~~~~~l~~li~~l~L----~~--~V~flG~~~d~v~~~el 605 (700)
|+..=+.|++.++..+|+. ++++ +....+.+ .....++.+++.+.|- .+ -|+++- ..++.+++
T Consensus 269 Gi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l 345 (474)
T PRK10117 269 GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLL 345 (474)
T ss_pred CHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEec---CCCCHHHH
Confidence 9999999999999988764 2222 22332222 2333444444444332 22 144443 46788999
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhcc
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCK 680 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~ 680 (700)
..+|+. |||++..+.-+|+.++..|+.||-. ++|.|...|.++.+. ..++|+|.|.+++|++|.+.++
T Consensus 346 ~alyr~-ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~--- 418 (474)
T PRK10117 346 MKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALT--- 418 (474)
T ss_pred HHHHHh-ccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCCHHHHHHHHHHHHc---
Confidence 999996 9999999999999999999999976 378899988888884 3789999999999999999984
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 005365 681 ADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 681 ~dp~~~~~ms~~ar~ra~e 699 (700)
..++.+++--+.-++.+.+
T Consensus 419 Mp~~Er~~R~~~l~~~v~~ 437 (474)
T PRK10117 419 MPLAERISRHAEMLDVIVK 437 (474)
T ss_pred CCHHHHHHHHHHHHHHhhh
Confidence 5666666666666666543
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.6e-06 Score=92.65 Aligned_cols=254 Identities=19% Similarity=0.182 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEE-EecCCccccCCCCchhhhhcccccchh------hhhhHHHHHHhhCCE
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFS------CQFTADLIAMNHTDF 475 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~-t~H~l~~~~~~~~~~~w~~~~~~y~~~------~~~~~E~~al~~AD~ 475 (700)
.++||+|.+ .+++++.++|+..|+|+++ -.|-... +..+...|. ....|+-. -| ..-+..-+.||.
T Consensus 91 ~~~p~~v~~---~Gg~v~~~aA~~~~~p~~~~~~~esn~--~~~~~~~~~-~~~~~~~~~G~~~~p~-e~n~l~~~~a~~ 163 (396)
T TIGR03492 91 AKKGDLIVA---VGDIVPLLFAWLSGKPYAFVGTAKSDY--YWESGPRRS-PSDEYHRLEGSLYLPW-ERWLMRSRRCLA 163 (396)
T ss_pred hhcCCEEEE---ECcHHHHHHHHHcCCCceEEEeeccce--eecCCCCCc-cchhhhccCCCccCHH-HHHHhhchhhCE
Confidence 348999998 4556678888889999876 2342211 101111111 01111110 01 112344567898
Q ss_pred EEecCHHHHHhhhhhhccccccccc-cCCCeEEeecCCCCCCCcceecCCCCccccccCCc---hhhhchhhHHHHHHHH
Q 005365 476 IITSTFQEIAGSKDTVGQYESHTAF-TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT---EEKRRLKSFHPEIEEL 551 (700)
Q Consensus 476 IIt~S~~~~~~~k~~~~~y~~~~~~-~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~---~~~Kgl~~Ll~Ai~~L 551 (700)
|.+......+.++ ++.....+ +.|-.- .+.. ..+. -++++....+..|-. +..+.+..++++++.+
T Consensus 164 v~~~~~~t~~~l~----~~g~k~~~vGnPv~d----~l~~-~~~~-~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L 233 (396)
T TIGR03492 164 VFVRDRLTARDLR----RQGVRASYLGNPMMD----GLEP-PERK-PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEAL 233 (396)
T ss_pred EeCCCHHHHHHHH----HCCCeEEEeCcCHHh----cCcc-cccc-ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHH
Confidence 8888866554332 22111111 111000 0000 0000 011122223333322 2235667888999888
Q ss_pred hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC--------------CcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 552 LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 552 l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~--------------~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
... ++..+++...++... +.+.+..++.+.. +++.++.+ ..++..+++. ||++|
T Consensus 234 ~~~-~~~~~v~~~~~~~~~----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~l~~-ADlvI 301 (396)
T TIGR03492 234 PDS-QPFVFLAAIVPSLSL----EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG------RGAFAEILHW-ADLGI 301 (396)
T ss_pred hhC-CCeEEEEEeCCCCCH----HHHHHHHHhcCceecCCccccchhhccCceEEEec------hHhHHHHHHh-CCEEE
Confidence 654 455554444333221 3344444444442 22555442 2467888886 99999
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEcCCCCc---cccccc-----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFATCKGGP---AEIIVN-----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~---~EiI~d-----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
..| |.+..|++++|+|+|.....+. ..+.+. | .+..+...+++.+++++.+++ +|++.+++|
T Consensus 302 ~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~ 371 (396)
T TIGR03492 302 AMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERC 371 (396)
T ss_pred ECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHH
Confidence 985 5666999999999999874333 122222 3 344555678899999999998 899988888
Q ss_pred HHHHHH
Q 005365 690 SLGGLK 695 (700)
Q Consensus 690 s~~ar~ 695 (700)
.+++++
T Consensus 372 ~~~~~~ 377 (396)
T TIGR03492 372 RRNGQE 377 (396)
T ss_pred HHHHHH
Confidence 854443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.6e-05 Score=88.89 Aligned_cols=270 Identities=13% Similarity=0.072 Sum_probs=167.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcC-CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~g-iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
+=|+|..|.+.-.+++..+..+.. .++.+..|..++..- .++...+...-...+-.||.|=..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE------------vfr~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE------------VFRCLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH------------HHhhCchHHHHHHHhhcCCeeEecCHHH
Confidence 349999999888888777776543 477788887655441 1122222222234577899999998877
Q ss_pred HHhhhhhhccccc---cccccCC-------CeEEeecCCCCCCCccee-----------------cCCCCccccccCCch
Q 005365 484 IAGSKDTVGQYES---HTAFTLP-------GLYRVVHGIDVFDPKFNI-----------------VSPGADMSIYFPYTE 536 (700)
Q Consensus 484 ~~~~k~~~~~y~~---~~~~~~p-------~l~~v~nGId~~~~k~~v-----------------Ip~G~d~~~F~g~~~ 536 (700)
+.-+-+...+... ......+ .....+-|||+ +.+.- ..++....+=+-|++
T Consensus 215 ~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~--~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlD 292 (486)
T COG0380 215 ARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDP--EEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLD 292 (486)
T ss_pred HHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCH--HHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcc
Confidence 6555444432210 0000111 12223345552 11110 001111222234567
Q ss_pred hhhchhhHHHHHHHHhhcCCCc--cEEE--EecCChhhHH----HHHHHHHHHHHcC-CCCc-----EEEeccccCcCCh
Q 005365 537 EKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDLEEQA----EMKKMYSLIDQYK-LNGQ-----FRWISSQMNRVRN 602 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~ee~~----~~~~l~~li~~l~-L~~~-----V~flG~~~d~v~~ 602 (700)
..||+..=+.|+++|+..+|+. ++++ +.....++.+ ...++.+++.+.+ .-+. |.|+- ..++.
T Consensus 293 y~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~ 369 (486)
T COG0380 293 YSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLH---RDLDR 369 (486)
T ss_pred cccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEe---ccCCH
Confidence 7799999999999999887764 2222 3333333322 3344444444432 1222 44443 35778
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
++++.+++. +|+++..++-+|+.++..|+-||-- |.|-|...|.+..+.+ .++++|.|.+++|++|...+.
T Consensus 370 ~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~- 444 (486)
T COG0380 370 NELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVADAIKRALT- 444 (486)
T ss_pred HHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHHHHHHHhc-
Confidence 999999996 9999999999999999999999854 7888888888777744 799999999999999999984
Q ss_pred ccCCHHHHHHHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra~ 698 (700)
..++.+++.-+.-++.+.
T Consensus 445 --m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 445 --MSLEERKERHEKLLKQVL 462 (486)
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 566665555555555544
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-05 Score=96.37 Aligned_cols=269 Identities=13% Similarity=0.070 Sum_probs=165.3
Q ss_pred eEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 407 DLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
|+|..|.+.-.+++..+.++. ..++.+-.|..++..- .|+...+...-...|-.||.|=..+...+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e------------ifr~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE------------IYKTLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH------------HHhhCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999998888887776654 4688888887654431 122222222233567789999999987765
Q ss_pred hhhhhhcc-----cccccc---ccCC----CeEEeecCCCCCCCcceec-----------------C-CCCccccccCCc
Q 005365 486 GSKDTVGQ-----YESHTA---FTLP----GLYRVVHGIDVFDPKFNIV-----------------S-PGADMSIYFPYT 535 (700)
Q Consensus 486 ~~k~~~~~-----y~~~~~---~~~p----~l~~v~nGId~~~~k~~vI-----------------p-~G~d~~~F~g~~ 535 (700)
-+...... |....+ .... .+...+-||+. ..+.-. . .|....+=+.++
T Consensus 271 ~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrl 348 (854)
T PLN02205 271 HFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHM--GQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDM 348 (854)
T ss_pred HHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcH--HHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCc
Confidence 44332221 111100 0000 01122234431 111100 0 011122222355
Q ss_pred hhhhchhhHHHHHHHHhhcCCCc--cEEE--EecCCh----hhHHHHHHHHHHHHHcC----CCC--cEEEeccccCcCC
Q 005365 536 EEKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDL----EEQAEMKKMYSLIDQYK----LNG--QFRWISSQMNRVR 601 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~----ee~~~~~~l~~li~~l~----L~~--~V~flG~~~d~v~ 601 (700)
+..||+..=+.|++.++..+|+. ++++ +....+ +..+...++.+++.+.+ -.+ -|.++- ..++
T Consensus 349 D~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~ 425 (854)
T PLN02205 349 DIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID---APLK 425 (854)
T ss_pred ccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCC
Confidence 66789999999999999988875 3333 222222 22233334445554432 222 366664 3678
Q ss_pred hhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-------------------CEEEcCCCCcccccccCCeEEEECC
Q 005365 602 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-------------------PTFATCKGGPAEIIVNGKSGYHIDP 662 (700)
Q Consensus 602 ~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-------------------PVVAT~~GG~~EiI~dg~~G~lv~p 662 (700)
.+|+..+|+. |||++..+..+|+.++..|+.+|.. .+|.|...|.+..+. ..++|+|
T Consensus 426 ~~e~~aly~~-ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP 501 (854)
T PLN02205 426 FYERVAYYVV-AECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNP 501 (854)
T ss_pred HHHHHHHHHh-ccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCeEECC
Confidence 8999999996 9999999999999999999999964 377788877777763 3699999
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 663 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|.+++|++|.+.+. ..++.++.--+.-++++.+
T Consensus 502 ~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~~ 535 (854)
T PLN02205 502 WNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVST 535 (854)
T ss_pred CCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 999999999999984 5555555555555555543
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.7e-05 Score=85.09 Aligned_cols=91 Identities=23% Similarity=0.295 Sum_probs=64.3
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg~~G~lv~ 661 (700)
++++|.+.+ +++..++ +. .+|++|..+- ..+++||+++|+|+|+....+- .+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899988 4444444 45 4999998742 2489999999999999754443 33344555777776
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
.. ++++++++|.+++ .|+++++++.+-
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l 369 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM 369 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 43 5789999999998 888766665443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.0001 Score=80.21 Aligned_cols=249 Identities=15% Similarity=0.117 Sum_probs=149.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+.+.--...-..-..-+++.|+|++..---+.. .|...|+.+ ..+ .+..+...|.|++-|+.++
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~-------~~~--~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKL-------KFL--ARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHH-------HHH--HHHHHHhcceeeecCHHHH
Confidence 899977744332222334556789998773221111 122233322 111 3356888999999997776
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCC----------------CCccccccCCchhhhchhhHHHHH
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP----------------GADMSIYFPYTEEKRRLKSFHPEI 548 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~----------------G~d~~~F~g~~~~~Kgl~~Ll~Ai 548 (700)
+ ++.+.+ .+.+. .-| .-|+.+.++ +-...++.+ ..+..-+.++++.
T Consensus 190 ~----Rf~~LG------a~~v~--v~G----NlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaS--TH~GEeei~l~~~ 251 (419)
T COG1519 190 Q----RFRSLG------AKPVV--VTG----NLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAS--THEGEEEIILDAH 251 (419)
T ss_pred H----HHHhcC------CcceE--Eec----ceeecCCCChhhHHHHHHHHHhcCCCCceEEEec--CCCchHHHHHHHH
Confidence 4 333222 12211 111 002222221 112222222 1222234577888
Q ss_pred HHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCC------------cEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 549 EELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNG------------QFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 549 ~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~------------~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
..++...++..+.++ .-.+| ..+...+++++.|+.- .=.++| | ..+||..+|.- +|+.
T Consensus 252 ~~l~~~~~~~llIlV--PRHpE--Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~---D--tmGEL~l~y~~-adiA 321 (419)
T COG1519 252 QALKKQFPNLLLILV--PRHPE--RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLG---D--TMGELGLLYGI-ADIA 321 (419)
T ss_pred HHHHhhCCCceEEEe--cCChh--hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEE---e--cHhHHHHHHhh-ccEE
Confidence 999888876544443 33343 3577888888887731 012333 2 36899999996 8865
Q ss_pred Ee-CCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 005365 617 VQ-PALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISL 691 (700)
Q Consensus 617 V~-PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~ 691 (700)
.. -|+.+-=|-.++|+.++|+|||.- +...+.+-+.....|+.|+ |.+.+++++..++ .|++.+++|++
T Consensus 322 FVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~ 395 (419)
T COG1519 322 FVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLL----ADEDKREAYGR 395 (419)
T ss_pred EECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHH
Confidence 44 577776678899999999999995 4444445555566788887 5777888777776 88999999999
Q ss_pred HHHHHHHhC
Q 005365 692 GGLKRIEEK 700 (700)
Q Consensus 692 ~ar~ra~e~ 700 (700)
+|...+.++
T Consensus 396 ~~~~~v~~~ 404 (419)
T COG1519 396 AGLEFLAQN 404 (419)
T ss_pred HHHHHHHHh
Confidence 999988753
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.5e-05 Score=82.52 Aligned_cols=113 Identities=14% Similarity=0.177 Sum_probs=72.3
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..+|+|..... .++++++. .++..+++.|.+..+ .-.++|++.++. ..++.+
T Consensus 195 iLv~~gg~~~~----~~~~~l~~----~~~~~~~v~g~~~~~---------------~~~~ni~~~~~~-----~~~~~~ 246 (318)
T PF13528_consen 195 ILVYFGGGGPG----DLIEALKA----LPDYQFIVFGPNAAD---------------PRPGNIHVRPFS-----TPDFAE 246 (318)
T ss_pred EEEEeCCCcHH----HHHHHHHh----CCCCeEEEEcCCccc---------------ccCCCEEEeecC-----hHHHHH
Confidence 44566655444 34444444 346677777554211 015679988743 256788
Q ss_pred HHHccCcEEEeCCCCCCccHH-HHHHHHcCCCEEEcCCCCccc------ccccCCeEEEECC--CCHHHHHHHHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLT-VVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHIDP--YHGEQAAEILVD 674 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~-vlEAMA~GlPVVAT~~GG~~E------iI~dg~~G~lv~p--~D~eaLAeaI~~ 674 (700)
+|+. ||++|.-+ |.+ +.||+++|+|++.-...+..| .+++-..|..+++ -+++.++++|.+
T Consensus 247 ~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 247 LMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred HHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhc
Confidence 8986 99999873 555 999999999999987655333 3334445666553 367888777764
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00023 Score=78.30 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=66.9
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|++++ +++..++..+++. |+++|--| +..+.||.++|+|||+ .|.-+|.++.|.+++++. .|++
T Consensus 261 ~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg-~~~~ 327 (365)
T TIGR03568 261 HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDVD-PDKE 327 (365)
T ss_pred CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEeC-CCHH
Confidence 35799999 7778999999997 99998654 2234899999999995 567888888888888884 5899
Q ss_pred HHHHHHHHHHHhccCCHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++.+++.+++ +++.++.+
T Consensus 328 ~I~~a~~~~~-----~~~~~~~~ 345 (365)
T TIGR03568 328 EIVKAIEKLL-----DPAFKKSL 345 (365)
T ss_pred HHHHHHHHHh-----ChHHHHHH
Confidence 9999999853 55554444
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=5e-05 Score=81.85 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=56.5
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccc------ccccCCeEEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYH 659 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~E------iI~dg~~G~l 659 (700)
+.+++.+.++. + +++..+|.. ||++|.-+-+ .++.||+++|+|++.....+..| .+++...|..
T Consensus 227 ~~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~ 296 (321)
T TIGR00661 227 YNENVEIRRIT----T-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIA 296 (321)
T ss_pred cCCCEEEEECC----h-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEE
Confidence 35678888743 2 568888886 9999998522 47999999999999987765333 4556567888
Q ss_pred ECCCCHHHHHHHHHHH
Q 005365 660 IDPYHGEQAAEILVDF 675 (700)
Q Consensus 660 v~p~D~eaLAeaI~~l 675 (700)
++..+. ++.+++.+.
T Consensus 297 l~~~~~-~~~~~~~~~ 311 (321)
T TIGR00661 297 LEYKEL-RLLEAILDI 311 (321)
T ss_pred cChhhH-HHHHHHHhc
Confidence 887777 444444444
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0022 Score=73.65 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv~ 661 (700)
++++|.+.+ +++..++..- . .+++||.= |=..++.||+.+|+|+|+.... ..+..++.-..|..++
T Consensus 344 ~p~Nv~i~~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~ 413 (507)
T PHA03392 344 LPANVLTQK----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD 413 (507)
T ss_pred CCCceEEec----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec
Confidence 456666666 4555555420 1 26777764 2346899999999999997543 3455555556788876
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
.. +.+++.++|.+++ +||+++++..+-+..
T Consensus 414 ~~~~t~~~l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 414 TVTVSAAQLVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred cCCcCHHHHHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 53 5688999999988 888887776554433
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00032 Score=76.55 Aligned_cols=252 Identities=16% Similarity=0.200 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCC-ccccCCCCchhhhhcccccchhhhhhHHH
Q 005365 390 YTEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHAL-EKTKYPDSDIYWKNLDDKYHFSCQFTADL 467 (700)
Q Consensus 390 f~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l-~~~~~~~~~~~w~~~~~~y~~~~~~~~E~ 467 (700)
....+...+.+. +||+|..+. ....+.+.++|..++||+++ +|+. -......+. .+...+.
T Consensus 55 ~~~~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~~g~-----~de~~R~-------- 117 (346)
T PF02350_consen 55 AIIELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRTEGM-----PDEINRH-------- 117 (346)
T ss_dssp HHHHHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TTSST-----THHHHHH--------
T ss_pred HHHHHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccCCCC-----chhhhhh--------
Confidence 334445555555 899998865 45567788899999999665 5543 111111000 1111111
Q ss_pred HHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCC-------CCCcc---eec-CCCCc--cccccC
Q 005365 468 IAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDV-------FDPKF---NIV-SPGAD--MSIYFP 533 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~-------~~~k~---~vI-p~G~d--~~~F~g 533 (700)
.+-+.||.-.++|...++.+.+. |. +.. .++.+-+ ++|. ...++ .+. ....+ ...+.+
T Consensus 118 ~i~~la~lhf~~t~~~~~~L~~~-G~-~~~------rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~ 189 (346)
T PF02350_consen 118 AIDKLAHLHFAPTEEARERLLQE-GE-PPE------RIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHP 189 (346)
T ss_dssp HHHHH-SEEEESSHHHHHHHHHT-T---GG------GEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-
T ss_pred hhhhhhhhhccCCHHHHHHHHhc-CC-CCC------eEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCc
Confidence 23345788888886665433221 11 011 1111110 1110 01111 110 01111 111222
Q ss_pred Cchh--hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc
Q 005365 534 YTEE--KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 534 ~~~~--~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~ 611 (700)
.... ......+..+++.+... .+..+++........ ...+.+.++++ ++++++. .+...++..+++.
T Consensus 190 ~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p~~---~~~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~ 258 (346)
T PF02350_consen 190 VTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNPRG---SDIIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN 258 (346)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-HHH---HHHHHHHHTT----TTEEEE--------HHHHHHHHHH
T ss_pred chhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCchH---HHHHHHHhccc---CCEEEEC----CCCHHHHHHHHhc
Confidence 2211 34566777777777766 455566555433322 23444545444 3899998 6778999999997
Q ss_pred cCcEEEeCCCCCCccHHHH-HHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 612 TKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vl-EAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
|+++|-=| | .+. ||.++|+|||.- +.|--.+.+..+.+-+ ++ .|++++.++|.+++ .+++.+.++
T Consensus 259 -a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 259 -ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp -ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHH
T ss_pred -ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHHHHHHHHHHHH----hChHHHHhh
Confidence 88887653 6 677 999999999998 5566677777776555 77 69999999999998 555666665
Q ss_pred H
Q 005365 690 S 690 (700)
Q Consensus 690 s 690 (700)
.
T Consensus 326 ~ 326 (346)
T PF02350_consen 326 K 326 (346)
T ss_dssp H
T ss_pred c
Confidence 4
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0064 Score=69.04 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=57.5
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCcccccccC-CeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNG-KSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI~dg-~~G~lv 660 (700)
+++.+.+ +++..++.. ..++ ||.= +=-++++||+++|+|+|+-.. ......+.+. ..|+-+
T Consensus 323 ~~~~v~~----w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~ 390 (459)
T PLN02448 323 DMGLVVP----WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRV 390 (459)
T ss_pred CCEEEec----cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEE
Confidence 3566666 555566554 2443 5443 223589999999999999644 3444445442 356665
Q ss_pred C-------CCCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHH
Q 005365 661 D-------PYHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKR 696 (700)
Q Consensus 661 ~-------p~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~r 696 (700)
. .-+.+++++++.+++ .++ +..++|++++.+.
T Consensus 391 ~~~~~~~~~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 391 KREVGEETLVGREEIAELVKRFM----DLESEEGKEMRRRAKEL 430 (459)
T ss_pred ecccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHHH
Confidence 3 136789999999998 554 3444555555443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0022 Score=67.95 Aligned_cols=94 Identities=14% Similarity=0.207 Sum_probs=60.8
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
.+.+|.....+....+++++..+ ..+..+.+ .|.+.. . .+++++.++.. .+|++.++. +++.+
T Consensus 174 Li~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~-~---~~~l~~~~~~~---~~i~~~~~~------~~m~~ 237 (279)
T TIGR03590 174 LVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNP-N---LDELKKFAKEY---PNIILFIDV------ENMAE 237 (279)
T ss_pred EEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCc-C---HHHHHHHHHhC---CCEEEEeCH------HHHHH
Confidence 45566555544344556666543 23344444 444332 2 24555555543 468888843 46788
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 644 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~ 644 (700)
+|+. ||++|.+ .|.|+.|++++|+|+|+...
T Consensus 238 lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 238 LMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 8886 9999996 57999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0036 Score=68.76 Aligned_cols=245 Identities=17% Similarity=0.147 Sum_probs=136.2
Q ss_pred HHHHHHHHHHcCCCCeEEEEc-CCCchHHHHHHHHhcCCc--EEEEec-CCccccCCCCchhhhhcccccchhhhhhHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGN-YSDGNIVASLLAHKLGVT--QCTIAH-ALEKTKYPDSDIYWKNLDDKYHFSCQFTADL 467 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h-~~~~~lva~lla~~~giP--~V~t~H-~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~ 467 (700)
..+.+.+... +||+++.- +++.|+-.....++.|+| +|+-+- ..| .|+.- + -+
T Consensus 72 ~~~~~~~~~~---~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvW---------AWr~~--R---------~~ 128 (373)
T PF02684_consen 72 RKLVERIKEE---KPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVW---------AWRPG--R---------AK 128 (373)
T ss_pred HHHHHHHHHc---CCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCcee---------eeCcc--H---------HH
Confidence 3344444444 99998884 466677666667777877 665322 111 12210 0 11
Q ss_pred HHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC---CCC-----cceecCCCCccccccCCchh--
Q 005365 468 IAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV---FDP-----KFNIVSPGADMSIYFPYTEE-- 537 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~---~~~-----k~~vIp~G~d~~~F~g~~~~-- 537 (700)
..-+..|.+.+.=+.|.+..++ +. ++..|+=+.=+|. ..+ +.. ++.+.....+.|..++
T Consensus 129 ~i~~~~D~ll~ifPFE~~~y~~----~g------~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~E 197 (373)
T PF02684_consen 129 KIKKYVDHLLVIFPFEPEFYKK----HG------VPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSE 197 (373)
T ss_pred HHHHHHhheeECCcccHHHHhc----cC------CCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHH
Confidence 2345578898888877643222 21 1111110000110 000 011 3444444555554332
Q ss_pred h-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 538 K-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 538 ~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
- +-+..++++++.+....++..+++...... ..+.+.+.....+....+.+.. ++-++.++. ||+.
T Consensus 198 I~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~m~~-ad~a 264 (373)
T PF02684_consen 198 IKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----HEELIEEILAEYPPDVSIVIIE--------GESYDAMAA-ADAA 264 (373)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----HHHHHHHHHHhhCCCCeEEEcC--------CchHHHHHh-Ccch
Confidence 2 345788899999998888887776655422 1123445555554443344332 345778886 9988
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-----------------CCCCcccccccCC-e-EEEECCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEIIVNGK-S-GYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-----------------~~GG~~EiI~dg~-~-G~lv~p~D~eaLAeaI~~ll~ 677 (700)
+..| |.+.+|++.+|+|.|.. +.-|++.++-+.. . =++-+.-+++.+++++..++
T Consensus 265 l~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll- 338 (373)
T PF02684_consen 265 LAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELL- 338 (373)
T ss_pred hhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHh-
Confidence 8875 99999999999999884 2233344432211 0 12223458999999999998
Q ss_pred hccCCHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLG 692 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ 692 (700)
.|++.++.....
T Consensus 339 ---~~~~~~~~~~~~ 350 (373)
T PF02684_consen 339 ---ENPEKRKKQKEL 350 (373)
T ss_pred ---cCHHHHHHHHHH
Confidence 788765444333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.003 Score=70.44 Aligned_cols=94 Identities=19% Similarity=0.142 Sum_probs=72.0
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv 660 (700)
++++++...+ +++..++.. .+|++|+. -|+ .++.||+..|+|+|+-..+ ..++.+++-.+|...
T Consensus 281 ~~p~n~~v~~----~~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 281 NVPDNVIVAD----YVPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred cCCCceEEec----CCCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 5778888887 555666555 59999998 233 4899999999999996443 355667777788887
Q ss_pred C--CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 D--PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~--p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+ .-+++.++++|.+++ .|+.+++...+...
T Consensus 349 ~~~~l~~~~l~~av~~vL----~~~~~~~~~~~~~~ 380 (406)
T COG1819 349 PFEELTEERLRAAVNEVL----ADDSYRRAAERLAE 380 (406)
T ss_pred CcccCCHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 7 578999999999998 88887776655443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0018 Score=72.57 Aligned_cols=154 Identities=12% Similarity=0.035 Sum_probs=96.8
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~~ 607 (700)
.+|.......|=-...++...++++..|+..+++...+... .+.+++.+++.|++ +++.|.+ ..+.++..+
T Consensus 286 vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~----~~~l~~~~~~~Gv~~~Ri~f~~----~~~~~ehl~ 357 (468)
T PF13844_consen 286 VVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG----EARLRRRFAAHGVDPDRIIFSP----VAPREEHLR 357 (468)
T ss_dssp EEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH----HHHHHHHHHHTTS-GGGEEEEE-------HHHHHH
T ss_pred eEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH----HHHHHHHHHHcCCChhhEEEcC----CCCHHHHHH
Confidence 44544455567677788889999999899988776554322 25677888889985 7899998 555677777
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc------cCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV------NGKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~------dg~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
.+.. +|+++=+-. =+-|.+.+||+.+|+|||+-....++.-+. =|-.-+++. |.++..+.-..+. .
T Consensus 358 ~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s~~eYv~~Av~La----~ 429 (468)
T PF13844_consen 358 RYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--SEEEYVEIAVRLA----T 429 (468)
T ss_dssp HGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--SHHHHHHHHHHHH----H
T ss_pred Hhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--CHHHHHHHHHHHh----C
Confidence 7776 999998732 334689999999999999964333322221 122223343 7888888877776 8
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
|++.+++++++-+++..
T Consensus 430 D~~~l~~lR~~Lr~~~~ 446 (468)
T PF13844_consen 430 DPERLRALRAKLRDRRS 446 (468)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999998887654
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00022 Score=77.01 Aligned_cols=83 Identities=27% Similarity=0.305 Sum_probs=57.3
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccc----ccc-CCeEEEE-C------CCCHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEI----IVN-GKSGYHI-D------PYHGEQA 668 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~Ei----I~d-g~~G~lv-~------p~D~eaL 668 (700)
+.+|..+ .|++.|+||+||++|.+..|.-.+|.|-|+|+..|..-. |++ ...|+++ + .++.++|
T Consensus 493 DYeeFVR----GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVR----GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhc----cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 3445544 599999999999999999999999999999998886544 433 2356554 2 2345666
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHH
Q 005365 669 AEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
++-+.++. ....|+++-++
T Consensus 569 ~~~m~~F~-----~qsRRQRIiqR 587 (692)
T KOG3742|consen 569 ASFMYEFC-----KQSRRQRIIQR 587 (692)
T ss_pred HHHHHHHH-----HHHHHHHHHHh
Confidence 66666664 33445544443
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.15 Score=57.86 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=58.8
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~lv~ 661 (700)
.++....+ +++..++... . +.++||.= -|+ ++++||+++|+|+|+. |....+..+.+. ..|+-+.
T Consensus 323 ~~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 392 (451)
T PLN02410 323 SGRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE 392 (451)
T ss_pred cCCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC
Confidence 35566666 6666666552 1 13335554 222 5899999999999996 444445555443 5776663
Q ss_pred -CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 -PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 -p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
.-+.++++++|.+++ .+++ .+++++++++.
T Consensus 393 ~~~~~~~v~~av~~lm----~~~~-~~~~r~~a~~l 423 (451)
T PLN02410 393 GDLDRGAVERAVKRLM----VEEE-GEEMRKRAISL 423 (451)
T ss_pred CcccHHHHHHHHHHHH----cCCc-HHHHHHHHHHH
Confidence 347789999999998 5653 34455544443
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.17 Score=57.80 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=45.8
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccccc-CCeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI~d-g~~G~lv 660 (700)
.++...+ +++..++.. .+++ ||.= -| -++++||+++|+|+|+... .-.+..+.+ -..|+-+
T Consensus 345 ~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~ 412 (482)
T PLN03007 345 KGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSV 412 (482)
T ss_pred CCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEe
Confidence 4566666 555555544 2433 5543 22 3589999999999999643 333332221 1233332
Q ss_pred --------C--CCCHHHHHHHHHHHH
Q 005365 661 --------D--PYHGEQAAEILVDFF 676 (700)
Q Consensus 661 --------~--p~D~eaLAeaI~~ll 676 (700)
+ .-+.++++++|.+++
T Consensus 413 ~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 413 GAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred ccccccccccCcccHHHHHHHHHHHh
Confidence 1 137789999999998
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.026 Score=61.18 Aligned_cols=63 Identities=13% Similarity=0.171 Sum_probs=44.8
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC---CcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
..+++- ||++|-- -|....||...|+|+|.+-.| +.-+.+.+ .|++..-.|++++.+.+....
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHhh
Confidence 345554 8888865 366679999999999997544 33333322 477887789999998776665
|
They are found in archaea and some bacteria and have no known function. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.086 Score=59.57 Aligned_cols=66 Identities=6% Similarity=-0.005 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCEEEcC----CCCccccccc-CCeEEEECC-----CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHIDP-----YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLK 695 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~----~GG~~EiI~d-g~~G~lv~p-----~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~ 695 (700)
++++||+++|+|+|+-. .-.....+.+ -..|..++. -+.++++++|.+++ .++ +..+++.+++++
T Consensus 340 nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 58999999999999964 3334444433 356777753 26789999999998 554 445666666654
Q ss_pred H
Q 005365 696 R 696 (700)
Q Consensus 696 r 696 (700)
.
T Consensus 416 ~ 416 (442)
T PLN02208 416 L 416 (442)
T ss_pred H
Confidence 3
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.2 Score=56.79 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=57.6
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~lv 660 (700)
+++.+.+ +++..++.. ... +||.= -| -++++||+.+|+|+|+. |....+..+.+. ..|+-+
T Consensus 328 ~~~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~ 395 (448)
T PLN02562 328 KQGKVVS----WAPQLEVLK----HQAVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI 395 (448)
T ss_pred cCEEEEe----cCCHHHHhC----CCccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe
Confidence 4566666 555555554 233 34432 22 35899999999999996 444455555442 567777
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKIS 690 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms 690 (700)
..-+.++++++|.+++ .|++++++..
T Consensus 396 ~~~~~~~l~~~v~~~l----~~~~~r~~a~ 421 (448)
T PLN02562 396 SGFGQKEVEEGLRKVM----EDSGMGERLM 421 (448)
T ss_pred CCCCHHHHHHHHHHHh----CCHHHHHHHH
Confidence 6568899999999998 7776665543
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.37 Score=55.12 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCCEEEcCC----CCcc-cccccCCeEEEECC-------------CCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCK----GGPA-EIIVNGKSGYHIDP-------------YHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~----GG~~-EiI~dg~~G~lv~p-------------~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
++++||+.+|+|+|+... -..+ .+++.-..|..++. -+.++++++|.+++. .|++++++
T Consensus 371 nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 371 NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 589999999999999643 3333 33444445766531 267889999999882 26555544
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.49 Score=53.21 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=57.6
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCccccccc
Q 005365 578 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN 653 (700)
Q Consensus 578 ~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~d 653 (700)
+++.+.+.-..+++.+. +..+..|+..+++. +|++|-.-. -.++=|++.|+|+|+-. +-|..+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444444555543 12345688899987 999887633 25677899999999953 34444444
Q ss_pred CCeEEEEC--CCCHHHHHHHHHHHHHhccCCHHH
Q 005365 654 GKSGYHID--PYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 654 g~~G~lv~--p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
|...++++ .-+++++.+++.+++ +|.+.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~ 395 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPA 395 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHH
Confidence 22334443 345678888888887 66544
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.86 E-value=1 Score=50.94 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYH 659 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~l 659 (700)
++++.+.+ +++..++.. ... +||.= +=.++++||+++|+|+|+- |..-....+.+. ..|.-
T Consensus 316 ~~~~~i~~----W~PQ~~iL~----H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~ 383 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLS----NKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVR 383 (449)
T ss_pred CCceEEeC----CCCHHHHhC----CCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEE
Confidence 35577777 555555554 233 44443 2246999999999999996 444455566553 46766
Q ss_pred ECCC------CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDPY------HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p~------D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+..+ +.+++++++.+++ .+++ .++++++|++.
T Consensus 384 v~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 384 VKAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGKW 421 (449)
T ss_pred EeecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHHH
Confidence 5321 6799999999998 5533 24555555443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.048 Score=59.23 Aligned_cols=239 Identities=16% Similarity=0.127 Sum_probs=123.7
Q ss_pred CCCCeEEEEcC-CCchHHHHHHHHhcC--CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEec
Q 005365 403 QGKPDLIIGNY-SDGNIVASLLAHKLG--VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (700)
Q Consensus 403 ~~~pDlIh~h~-~~~~lva~lla~~~g--iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~ 479 (700)
..+||++++-+ ++.++-.....|+.+ +|+|+-+-- +--.|+.- + -....+..|.+.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~----R-------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPK----R-------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechh----h-------HHHHHHHhhHeeee
Confidence 34999988854 555664444445555 787764321 11123211 0 11346678999999
Q ss_pred CHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC------cceecCCCCccccccCCc--hh-hhchhhHHHHHHH
Q 005365 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP------KFNIVSPGADMSIYFPYT--EE-KRRLKSFHPEIEE 550 (700)
Q Consensus 480 S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~------k~~vIp~G~d~~~F~g~~--~~-~Kgl~~Ll~Ai~~ 550 (700)
=+.|.+.+++.-. ...+.+.++-+ -+++.+. ++. ++.........|.. ++ .+-...+.++++.
T Consensus 144 lPFE~~~y~k~g~-~~~yVGHpl~d------~i~~~~~r~~ar~~l~-~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~ 215 (381)
T COG0763 144 LPFEPAFYDKFGL-PCTYVGHPLAD------EIPLLPDREAAREKLG-IDADEKTLALLPGSRRSEIRRLLPPFVQAAQE 215 (381)
T ss_pred cCCCHHHHHhcCC-CeEEeCChhhh------hccccccHHHHHHHhC-CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 8888654433211 11111111111 0100000 111 22223333344432 22 2445677889999
Q ss_pred HhhcCCCccEEEEecCChhhHHHHHHHH-HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 551 LLYSDVENKEHLKESKDLEEQAEMKKMY-SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 551 Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~-~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
+....++.++++--.... .+... +.++.......+... .++.+..++. ||+.+..| |.+.
T Consensus 216 l~~~~~~~~~vlp~~~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~a~~~-aD~al~aS-----GT~t 276 (381)
T COG0763 216 LKARYPDLKFVLPLVNAK-----YRRIIEEALKWEVAGLSLILI--------DGEKRKAFAA-ADAALAAS-----GTAT 276 (381)
T ss_pred HHhhCCCceEEEecCcHH-----HHHHHHHHhhccccCceEEec--------CchHHHHHHH-hhHHHHhc-----cHHH
Confidence 988888877776554421 12222 222222221223333 2455677775 99877765 9999
Q ss_pred HHHHHcCCCEEEcC-----------------CCCcccccccCCeE--EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 005365 630 VEAMTCGLPTFATC-----------------KGGPAEIIVNGKSG--YHIDPYHGEQAAEILVDFFEKCKADPSYWDKIS 690 (700)
Q Consensus 630 lEAMA~GlPVVAT~-----------------~GG~~EiI~dg~~G--~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms 690 (700)
+|+|.+|+|.|.+- ..+++.|+-+.... ++=+.-.++.+++++..++ .|...+.++.
T Consensus 277 LE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll----~~~~~~~~~~ 352 (381)
T COG0763 277 LEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELL----LNGDRREALK 352 (381)
T ss_pred HHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHh----cChHhHHHHH
Confidence 99999999999862 23444444321100 0001225788999998887 7775544444
Q ss_pred H
Q 005365 691 L 691 (700)
Q Consensus 691 ~ 691 (700)
+
T Consensus 353 ~ 353 (381)
T COG0763 353 E 353 (381)
T ss_pred H
Confidence 3
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.71 E-value=1.6 Score=49.50 Aligned_cols=86 Identities=8% Similarity=0.021 Sum_probs=55.3
Q ss_pred cCChhHHHHHHHccC--cEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccc-cCCeEEEECC-----CCHH
Q 005365 599 RVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIV-NGKSGYHIDP-----YHGE 666 (700)
Q Consensus 599 ~v~~~el~~~la~~a--DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~-dg~~G~lv~p-----~D~e 666 (700)
+++..++.+ .. ++||.= +=-++++||+++|+|+|+-. .--.+..+. .-..|..+.. -+.+
T Consensus 319 w~PQ~~vL~----h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 390 (446)
T PLN00414 319 WVEQPLILS----HPSVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKE 390 (446)
T ss_pred cCCHHHHhc----CCccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHH
Confidence 455555554 24 445553 22368999999999999964 333445553 3457777642 3788
Q ss_pred HHHHHHHHHHHhccCCH-HHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADP-SYWDKISLGGLKR 696 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp-~~~~~ms~~ar~r 696 (700)
++++++.+++ .++ +..+++.+++++.
T Consensus 391 ~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 391 SLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 9999999998 553 4455666666543
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.55 E-value=1.2 Score=50.81 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECC------CCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP------YHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p------~D~eaLAeaI~~ll 676 (700)
++++||+++|+|+|+. |.......++.-..|..++. -+.++++++|.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm 427 (472)
T PLN02670 368 NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM 427 (472)
T ss_pred chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence 6899999999999996 44445555555667887753 25889999999998
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.097 Score=59.29 Aligned_cols=149 Identities=14% Similarity=0.150 Sum_probs=103.1
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L-~~~V~flG~~~d~v~~~el~ 606 (700)
..+|.......|-...+.....+++...|+..+++.++|+.++ -...+++++++.|+ .++++|++ +.++++..
T Consensus 430 avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~--~~~~l~~la~~~Gv~~eRL~f~p----~~~~~~h~ 503 (620)
T COG3914 430 AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE--INARLRDLAEREGVDSERLRFLP----PAPNEDHR 503 (620)
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH--HHHHHHHHHHHcCCChhheeecC----CCCCHHHH
Confidence 4566666667788888888888888888999999988886653 45788999999998 47999999 56667888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-------CCCCcccccc-cCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CKGGPAEIIV-NGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-------~~GG~~EiI~-dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
..+.- +|+++=..-|-| +.|.+||+-+|+||++- ..|+. ++. -|..-+++. +.++..++-..+-
T Consensus 504 a~~~i-ADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s~~dYV~~av~~g-- 575 (620)
T COG3914 504 ARYGI-ADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--SRADYVEKAVAFG-- 575 (620)
T ss_pred Hhhch-hheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--CHHHHHHHHHHhc--
Confidence 88886 999886644433 46899999999999983 33321 111 133333443 4444444444443
Q ss_pred ccCCHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLG 692 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ 692 (700)
.|...+++.+..
T Consensus 576 --~dral~q~~r~~ 587 (620)
T COG3914 576 --SDRALRQQVRAE 587 (620)
T ss_pred --ccHHHHHhhHHH
Confidence 666666665544
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.015 Score=49.81 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=52.5
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t 434 (700)
+.+.+++.+|+... .+....|.+-....-+...+.++ +.||||+|...+.+ -+.+-|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~IlirE---~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIRE---RIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHHc---CeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 34789999998753 23445565555444455555555 89999999976655 5888899999999999
Q ss_pred ecCCc
Q 005365 435 AHALE 439 (700)
Q Consensus 435 ~H~l~ 439 (700)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99874
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.49 E-value=1.2 Score=48.78 Aligned_cols=133 Identities=11% Similarity=0.133 Sum_probs=91.3
Q ss_pred hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 538 KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 538 ~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
.+++..++.++.++....++..++.-... .+. .++.. -..++-.++|..+. ++...+...++.. |.+.+
T Consensus 218 ~~~~~~i~~al~~i~~~~~~~~viyp~H~-~~~---v~e~~--~~~L~~~~~v~li~----pl~~~~f~~L~~~-a~~il 286 (383)
T COG0381 218 GEPLEEICEALREIAEEYPDVIVIYPVHP-RPR---VRELV--LKRLKNVERVKLID----PLGYLDFHNLMKN-AFLIL 286 (383)
T ss_pred cccHHHHHHHHHHHHHhCCCceEEEeCCC-Chh---hhHHH--HHHhCCCCcEEEeC----CcchHHHHHHHHh-ceEEE
Confidence 37788899999999988865554443322 221 12222 24455566799987 7777888888886 64444
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
-=| |...=||-..|+||++- +...-+|.++.| +-.++. .|.+.+.+++..++ ++++.+++|+..
T Consensus 287 tDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~i~~~~~~ll----~~~~~~~~m~~~ 351 (383)
T COG0381 287 TDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEENILDAATELL----EDEEFYERMSNA 351 (383)
T ss_pred ecC-----CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHHHHHHHHHHh----hChHHHHHHhcc
Confidence 333 66677999999999996 445566777554 445565 47789999999988 899988888753
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.47 E-value=2.3 Score=48.38 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=46.7
Q ss_pred cCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCccccccc-CCeEEEECC------CCH
Q 005365 599 RVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHIDP------YHG 665 (700)
Q Consensus 599 ~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~d-g~~G~lv~p------~D~ 665 (700)
+++..++.. .+. +||.= -|+ ++++||+++|+|+|+-. ..-.+..+.+ -..|..+.. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 555555554 243 55543 222 48999999999999964 3334445554 357877642 377
Q ss_pred HHHHHHHHHHH
Q 005365 666 EQAAEILVDFF 676 (700)
Q Consensus 666 eaLAeaI~~ll 676 (700)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 89999999998
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.21 Score=57.89 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-CC------------------CCcccccccCC-eEEEE---CC
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CK------------------GGPAEIIVNGK-SGYHI---DP 662 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-~~------------------GG~~EiI~dg~-~G~lv---~p 662 (700)
++.++. ||+.+..| |.+.+|++.+|+|.|.. .. -+++.++.+.. -=-++ +.
T Consensus 483 ~~~m~a-aD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~ 556 (608)
T PRK01021 483 YELMRE-CDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKD 556 (608)
T ss_pred HHHHHh-cCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCccc
Confidence 677775 99999885 99999999999999984 22 22222332211 01122 33
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
-+++.+++++ +++ .|++.++++.+.-.
T Consensus 557 ~tpe~La~~l-~lL----~d~~~r~~~~~~l~ 583 (608)
T PRK01021 557 FQPEEVAAAL-DIL----KTSQSKEKQKDACR 583 (608)
T ss_pred CCHHHHHHHH-HHh----cCHHHHHHHHHHHH
Confidence 4789999986 666 78887777766443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.038 Score=54.01 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=56.4
Q ss_pred HHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCC--chhhh-hcccccchhhhhhHHHHHH
Q 005365 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDS--DIYWK-NLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 395 ~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~--~~~w~-~~~~~y~~~~~~~~E~~al 470 (700)
...+++. +..||||++|...+. ++.+...+ ++|++.-+--.......+. +.... ......+...+-+.-...+
T Consensus 57 ~~~L~~~-Gf~PDvI~~H~GWGe--~Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l 133 (171)
T PF12000_consen 57 ARQLRAQ-GFVPDVIIAHPGWGE--TLFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLAL 133 (171)
T ss_pred HHHHHHc-CCCCCEEEEcCCcch--hhhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHH
Confidence 3344443 568999999986665 33445555 6777653221111110000 00000 0111122222222344678
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccc
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F 531 (700)
..||..|+.|..++. .+. . .+..|+.|+..|+|+..+
T Consensus 134 ~~~D~~isPT~wQ~~----~fP-----------~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 134 EQADAGISPTRWQRS----QFP-----------A---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HhCCcCcCCCHHHHH----hCC-----------H---------HHHcCcEEeecccchhhc
Confidence 899999999977754 221 1 114577777888777654
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.08 E-value=2.5 Score=48.28 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=48.8
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccc-ccCCeEEEEC
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID 661 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI-~dg~~G~lv~ 661 (700)
.+.+.+ +++..++.. ...+ ||.= +=-++++||+.+|+|+|+... ......+ +.-..|..++
T Consensus 339 g~vv~~----W~PQ~~iL~----h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 406 (481)
T PLN02992 339 GFVVPS----WAPQAEILA----HQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD 406 (481)
T ss_pred CEEEee----cCCHHHHhC----CcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec
Confidence 366666 555555544 2333 4432 223589999999999999643 3444455 2444677764
Q ss_pred C----CCHHHHHHHHHHHH
Q 005365 662 P----YHGEQAAEILVDFF 676 (700)
Q Consensus 662 p----~D~eaLAeaI~~ll 676 (700)
. -+.++++++|.+++
T Consensus 407 ~~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 407 DPKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCCcccHHHHHHHHHHHh
Confidence 3 37789999999998
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.22 Score=51.91 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCccEEEE-ecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 623 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~-g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 623 (700)
.+.++.|... +..++++ |+++. ....+.+.+++ .+++.+.- +.++|.++|.+ ||+.+..
T Consensus 175 ~kvl~~L~~~--~~nl~iV~gs~~p----~l~~l~k~~~~---~~~i~~~~------~~~dma~LMke-~d~aI~A---- 234 (318)
T COG3980 175 LKVLAELEQK--NVNLHIVVGSSNP----TLKNLRKRAEK---YPNINLYI------DTNDMAELMKE-ADLAISA---- 234 (318)
T ss_pred HHHHHHhhcc--CeeEEEEecCCCc----chhHHHHHHhh---CCCeeeEe------cchhHHHHHHh-cchheec----
Confidence 3444444432 2345554 43432 23455555554 46677764 34678899997 8887765
Q ss_pred CccHHHHHHHHcCCCE--EE--cCCCCccccccc----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 624 AFGLTVVEAMTCGLPT--FA--TCKGGPAEIIVN----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 624 ~fGl~vlEAMA~GlPV--VA--T~~GG~~EiI~d----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
-|.++.||...|+|. +. .+.-..+...+. -..|++. ...+....+.++. +|+..+..++..++
T Consensus 235 -aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 235 -AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKDYEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred -cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHHHHHHHhh----hCHHHhhhhhhccc
Confidence 389999999999993 33 222222221111 2245553 3355556666665 89999888776543
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=95.64 E-value=1.5 Score=47.27 Aligned_cols=140 Identities=9% Similarity=0.015 Sum_probs=87.9
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+-.|+.... .+....++++.... ..+.++++ .+.|++ ..++++++.+..+++--.+++..+- +.++.+|..
T Consensus 187 tILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-n~~Yi~~V~~~~~~lF~~~~~~iL~---e~mpf~eYl 260 (360)
T PF07429_consen 187 TILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-NQAYIQQVIQAGKELFGAENFQILT---EFMPFDEYL 260 (360)
T ss_pred EEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-hHHHHHHHHHHHHHhcCccceeEhh---hhCCHHHHH
Confidence 3444554333 33333444444321 22344444 333433 3478888988888876556788765 467789999
Q ss_pred HHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCc-ccccccCCeEEEE-CCCCHHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVNGKSGYHI-DPYHGEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~-~EiI~dg~~G~lv-~p~D~eaLAeaI~~ll 676 (700)
++++. ||+.++.. +..|.|+ ++=.+.+|+||+.+...-. .++.+.+..=+.. +.-|.+.++++=+++.
T Consensus 261 ~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 261 ALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred HHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHh
Confidence 99997 99999996 6789984 5568999999999865554 4444443322222 4456677777666554
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.24 Score=59.09 Aligned_cols=141 Identities=14% Similarity=0.112 Sum_probs=96.2
Q ss_pred CCCccccccCCchhhhchhh-HHHHHHH---HhhcCC----CccEEEEec---CChhhHHHHHHHHHHHH----HcCCCC
Q 005365 524 PGADMSIYFPYTEEKRRLKS-FHPEIEE---LLYSDV----ENKEHLKES---KDLEEQAEMKKMYSLID----QYKLNG 588 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~-Ll~Ai~~---Ll~~~~----~~~l~i~g~---Gd~ee~~~~~~l~~li~----~l~L~~ 588 (700)
+..-+++|.-|+...||... ++..+.. ++..+. ...++++|- ++...+..++.+.++++ +-.+.+
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 44446678888999999887 5555444 443321 123334432 33344445566666665 223344
Q ss_pred --cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 589 --QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 589 --~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
+|.|+. |. +=.+.+.+-.++|+-.+-|. .|+.|.+=+-||.-|.+.++|-.|...|+.++ ++|||.|..
T Consensus 621 ~lkVVFle---nY--~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~ 695 (815)
T PRK14986 621 KLKVVFIP---NY--SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGN 695 (815)
T ss_pred ceeEEEeC---CC--CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCC
Confidence 688886 22 34556666557999999876 79999999999999999999999999999987 899999975
Q ss_pred CCHHHHHH
Q 005365 663 YHGEQAAE 670 (700)
Q Consensus 663 ~D~eaLAe 670 (700)
+.++.++
T Consensus 696 -~~~ev~~ 702 (815)
T PRK14986 696 -TAEEVEA 702 (815)
T ss_pred -CHHHHHH
Confidence 5555444
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=2.9 Score=44.63 Aligned_cols=135 Identities=10% Similarity=0.015 Sum_probs=86.1
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+-.|+.... .+....++++.+.. ..+.++++ .|.+.+. .+|+++..+..+++--.++++.+- +.++.+|..
T Consensus 148 tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~gn-~~Yi~~V~~~~~~lF~~~~~~~L~---e~l~f~eYl 221 (322)
T PRK02797 148 TILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPANN-QAYIEEVRQAGLALFGAENFQILT---EKLPFDDYL 221 (322)
T ss_pred EEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCCCC-HHHHHHHHHHHHHhcCcccEEehh---hhCCHHHHH
Confidence 3445554333 33444444544432 22334444 3332222 378888888888876557888886 577789999
Q ss_pred HHHHccCcEEEeC-CCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeE-EEECCCCHHHHHHH
Q 005365 607 RYICDTKGAFVQP-ALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSG-YHIDPYHGEQAAEI 671 (700)
Q Consensus 607 ~~la~~aDvfV~P-S~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G-~lv~p~D~eaLAea 671 (700)
++++. +|+.++- .+.+|.|. ++=.+..|+||+.+ ++.-..++.+.|..= |--+.-|...+.++
T Consensus 222 ~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~Vlf~~d~L~~~~v~e~ 287 (322)
T PRK02797 222 ALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPVLFTGDDLDEDIVREA 287 (322)
T ss_pred HHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeEEecCCcccHHHHHHH
Confidence 99997 9998887 46789985 44578999999998 566667777666543 22344455555554
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=94.95 E-value=7.4 Score=42.92 Aligned_cols=87 Identities=18% Similarity=0.291 Sum_probs=55.1
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccccCCeEE--EE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNGKSGY--HI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~dg~~G~--lv 660 (700)
.++|.+.- +.. ..++...++. +|+.|-.-+ -+++=||+.|+|+|+-. .-|+.+-. |..|+ .+
T Consensus 265 ~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~--gl~~~~~~i 332 (385)
T COG2327 265 SAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL--GLPGFAIDI 332 (385)
T ss_pred ccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--CCCcccccC
Confidence 36677764 222 3566768886 888775532 25677999999999953 23333333 33333 45
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
.|.|.+.+.+...+.+. .+++.+++
T Consensus 333 ~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 333 DPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 66788889988888874 55554333
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.30 E-value=1.4 Score=48.21 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=47.5
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
-+..+++++..+.... ..+++.+..+. +.+++..++. ..+.+.+ +.+.+++. ||+.+..
T Consensus 184 llP~~~~aa~~L~~~~--~~~~i~~a~~~------~~i~~~~~~~---~~~~~~~---------~~~~~m~~-aDlal~~ 242 (347)
T PRK14089 184 LMPIFKELAKKLEGKE--KILVVPSFFKG------KDLKEIYGDI---SEFEISY---------DTHKALLE-AEFAFIC 242 (347)
T ss_pred HHHHHHHHHHHHhhcC--cEEEEeCCCcH------HHHHHHHhcC---CCcEEec---------cHHHHHHh-hhHHHhc
Confidence 3445567887776542 44555544321 2333333322 2344543 23667775 9988887
Q ss_pred CCCCCccHHHHHHHHcCCCEEEc
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT 642 (700)
| |.+.+|++.+|+|.|..
T Consensus 243 S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 243 S-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred C-----cHHHHHHHHhCCCEEEE
Confidence 5 88889999999999985
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.15 Score=60.53 Aligned_cols=142 Identities=15% Similarity=0.090 Sum_probs=93.2
Q ss_pred CCCCccccccCCchhhhchhh-HHHHH---HHHhhcCCC---c-cEEEEec---CChhhHHHHHHHHHHHHHcC----CC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPEI---EELLYSDVE---N-KEHLKES---KDLEEQAEMKKMYSLIDQYK----LN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~Ai---~~Ll~~~~~---~-~l~i~g~---Gd~ee~~~~~~l~~li~~l~----L~ 587 (700)
.+..-++++.-|+...||... ++..+ ..++..+.. + .++++|- ++...+..++.+...++..+ +.
T Consensus 524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred CccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhC
Confidence 344556778889999999877 55544 444433211 2 2333332 22223333444444443321 34
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. | . +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.++ ++|+|+|-
T Consensus 604 ~~lkVVFle---n-Y-~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 604 DKLKVVFVP---N-Y-NVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred CceeEEEeC---C-C-ChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 5 688886 2 2 23455555556999999876 79999999999999999999999999999987 88999997
Q ss_pred CCCHHHHHH
Q 005365 662 PYHGEQAAE 670 (700)
Q Consensus 662 p~D~eaLAe 670 (700)
. +.++..+
T Consensus 679 ~-~~~ev~~ 686 (794)
T TIGR02093 679 L-TVEEVEA 686 (794)
T ss_pred C-CHHHHHH
Confidence 4 4555443
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.54 Score=55.60 Aligned_cols=135 Identities=19% Similarity=0.147 Sum_probs=96.2
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcC---CCccEE-EEec----CChhhHHHHHHHHHHHHHcCCCCcEEEecc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSD---VENKEH-LKES----KDLEEQAEMKKMYSLIDQYKLNGQFRWISS 595 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~---~~~~l~-i~g~----Gd~ee~~~~~~l~~li~~l~L~~~V~flG~ 595 (700)
|..-+++|.-|+...||....+.-+..+.... ....+. |.|+ ++...+..++.+...++..+...+|.|+.
T Consensus 485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~- 563 (750)
T COG0058 485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP- 563 (750)
T ss_pred CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC-
Confidence 55567788889999999876654443333221 123344 3333 23333445566666777666667899996
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccc--cCCeEEEECCC
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPY 663 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~--dg~~G~lv~p~ 663 (700)
|. +-.+.+.+-.++||-.+-|. .|+.|.+=+-||.-|.+.|+|-.|...|+.+ .++|||+|...
T Consensus 564 --nY--dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~ 631 (750)
T COG0058 564 --NY--DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGET 631 (750)
T ss_pred --CC--ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCc
Confidence 21 34555555557999999775 6999999999999999999999999999997 89999999753
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.80 E-value=12 Score=40.66 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccc--
Q 005365 572 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE-- 649 (700)
Q Consensus 572 ~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~E-- 649 (700)
+..+++.+.+. -.++|...-+. .++..+++. |+..|.-+-| +|+.|-++.|||.+.-..+.++|
T Consensus 264 ~~r~~l~~~A~---~~p~i~I~~f~------~~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQ 329 (400)
T COG4671 264 AQRQKLLASAP---KRPHISIFEFR------NDFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQ 329 (400)
T ss_pred HHHHHHHHhcc---cCCCeEEEEhh------hhHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHH
Confidence 34444444433 33568887754 457888886 8888876432 58899999999999977665555
Q ss_pred cccc------CCeEEEEC-CCCHHHHHHHHHHHHH
Q 005365 650 IIVN------GKSGYHID-PYHGEQAAEILVDFFE 677 (700)
Q Consensus 650 iI~d------g~~G~lv~-p~D~eaLAeaI~~ll~ 677 (700)
.+.. |--.++-+ .-.++.||++|...+.
T Consensus 330 liRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 330 LIRAQRLEELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred HHHHHHHHhcCcceeeCcccCChHHHHHHHHhccc
Confidence 1110 22233332 2357888999888774
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.39 Score=57.22 Aligned_cols=141 Identities=12% Similarity=0.046 Sum_probs=92.9
Q ss_pred CCCCccccccCCchhhhchhh-HHHHHH---HHhhcCC---C-ccEEEEec---CChhhHHHHHHHHHHHHHcC----CC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPEIE---ELLYSDV---E-NKEHLKES---KDLEEQAEMKKMYSLIDQYK----LN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~Ai~---~Ll~~~~---~-~~l~i~g~---Gd~ee~~~~~~l~~li~~l~----L~ 587 (700)
.+..-+++|.-|+...||... ++..+. .++..+. . ..++++|- |+...+..++.+...++..+ +.
T Consensus 526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~ 605 (798)
T PRK14985 526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG 605 (798)
T ss_pred CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence 344456778888999999877 555444 3433321 1 23334332 23333344445555553332 24
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. | . +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.+.++|-.|...|+.++ ++|||.|-
T Consensus 606 ~~lkVVFle---n-Y-~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 606 DKLKVVFLP---D-Y-CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred CceeEEEeC---C-C-ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 4 688886 2 2 33455555556999999876 79999999999999999999999999999986 78999997
Q ss_pred CCCHHHHH
Q 005365 662 PYHGEQAA 669 (700)
Q Consensus 662 p~D~eaLA 669 (700)
. +.++..
T Consensus 681 ~-~~~ev~ 687 (798)
T PRK14985 681 H-TVEQVK 687 (798)
T ss_pred C-CHHHHH
Confidence 5 444443
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.4 Score=57.32 Aligned_cols=141 Identities=15% Similarity=0.074 Sum_probs=94.6
Q ss_pred CCCCccccccCCchhhhchhh-HHHH---HHHHhhcCC---Cc-cEEEEec---CChhhHHHHHHHHHHHHHc----CCC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPE---IEELLYSDV---EN-KEHLKES---KDLEEQAEMKKMYSLIDQY----KLN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~A---i~~Ll~~~~---~~-~l~i~g~---Gd~ee~~~~~~l~~li~~l----~L~ 587 (700)
.|..-+++|.-|+...||... ++.. +.+++..+. .+ .++++|- ++...+..++.+..+++.. .+.
T Consensus 527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcC
Confidence 445556788889999999887 5544 444444321 12 2333332 2333334455555555532 234
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. |. +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.++ ++|+|+|-
T Consensus 607 ~~lkVVFle---nY--~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 607 DKLKVVFLP---NY--NVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred CceEEEEeC---CC--ChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 4 688886 22 33455555556999999876 79999999999999999999999999999987 88999997
Q ss_pred CCCHHHHH
Q 005365 662 PYHGEQAA 669 (700)
Q Consensus 662 p~D~eaLA 669 (700)
. +.++..
T Consensus 682 ~-~~~ev~ 688 (797)
T cd04300 682 L-TAEEVE 688 (797)
T ss_pred C-CHHHHH
Confidence 5 444444
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=93.28 E-value=18 Score=41.22 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCEEEcCC----CCccccc-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID------PYHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~----GG~~EiI-~dg~~G~lv~------p~D~eaLAeaI~~ll 676 (700)
++++||+++|+|+|+-.. .-....+ +.-..|.-+. .-..++++++|..++
T Consensus 364 nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 364 SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 589999999999999643 3333333 2334555552 125688999999987
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.039 Score=53.35 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=57.5
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYH 659 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~l 659 (700)
.+|.+.++.+ ++..+|+. ||+.|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789998654 36777876 99988852 3479999999999998866555 2223333334444
Q ss_pred ECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 660 IDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 660 v~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+.. .+++.|.++|..++ .++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 432 23677888888876 8888777766553
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.13 Score=55.77 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=77.9
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCC---CCC---ccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEEC
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL---YEA---FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~---~E~---fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~ 661 (700)
+++..+|... +.+.+..++.. .++++.=++ .++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+.
T Consensus 237 ~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~- 311 (373)
T COG4641 237 PNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY- 311 (373)
T ss_pred chhhhhhccC---ccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe-
Confidence 4566677322 12666676665 777666443 222 378899999999999999888888888888764444
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 662 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 662 p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|..++++++..++ ..++.++++.+.|++++..
T Consensus 312 -~d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~ 344 (373)
T COG4641 312 -QDSKDLKEKLKYLL----NHPDERKEIAECAYERVLA 344 (373)
T ss_pred -cCHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHH
Confidence 49999999999998 8999999999999999864
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.17 E-value=4.2 Score=43.29 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=38.5
Q ss_pred CcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC---CcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 613 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 613 aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
|++++-. -|.-.-||...|+|.|++.-| +..+... +.|.++...|+.+..+...+.+
T Consensus 253 a~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 5555433 355568999999999998744 3333332 3677888778877766666665
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=92.59 E-value=15 Score=38.41 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=51.2
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
+...+.++.+... +..+++.|+.+ +.+ ...++.+..+..+.+.+.| ..+..|+..+++. +|++|.+.
T Consensus 140 ~~~~~l~~~l~~~--~~~ivl~g~~~--e~~---~~~~i~~~~~~~~~~~~~~----~~~l~e~~~li~~-~~l~I~~D- 206 (279)
T cd03789 140 ERFAALADRLLAR--GARVVLTGGPA--ERE---LAEEIAAALGGPRVVNLAG----KTSLRELAALLAR-ADLVVTND- 206 (279)
T ss_pred HHHHHHHHHHHHC--CCEEEEEechh--hHH---HHHHHHHhcCCCccccCcC----CCCHHHHHHHHHh-CCEEEeeC-
Confidence 3455555655543 55666665543 222 2333333332233355666 5567999999997 99999983
Q ss_pred CCCccHHHHHHHHcCCCEEEc
Q 005365 622 YEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT 642 (700)
+ | .+-=|.+.|+|+|+-
T Consensus 207 --s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 207 --S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred --C-H-HHHHHHHcCCCEEEE
Confidence 2 3 344456999999994
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=19 Score=39.19 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=49.9
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++.++.+ ...++++.......+.+.| ..+..|+..+++. +++||-.-
T Consensus 203 ~fa~l~~~L~~~--~~~vvl~ggp~e~e~~---~~~~i~~~~~~~~~~~l~g----~~sL~el~ali~~-a~l~v~nD-- 270 (352)
T PRK10422 203 KFSAVIDALQAR--GYEVVLTSGPDKDDLA---CVNEIAQGCQTPPVTALAG----KTTFPELGALIDH-AQLFIGVD-- 270 (352)
T ss_pred HHHHHHHHHHHC--CCeEEEEcCCChHHHH---HHHHHHHhcCCCccccccC----CCCHHHHHHHHHh-CCEEEecC--
Confidence 444455555432 4556666654332222 2233333222223355677 6678999999997 99999883
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
+- .+-=|-|.|+|+|+
T Consensus 271 -SG--p~HlAaA~g~P~v~ 286 (352)
T PRK10422 271 -SA--PAHIAAAVNTPLIC 286 (352)
T ss_pred -CH--HHHHHHHcCCCEEE
Confidence 22 34446788999998
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=91.10 E-value=25 Score=37.97 Aligned_cols=84 Identities=17% Similarity=0.166 Sum_probs=50.5
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++..+.+..+ ++.+..+-..-+.+.| ..+..|+..+++. ++++|-.
T Consensus 201 ~~~~l~~~l~~~--~~~ivl~g~p~~~e~~~~~---~i~~~~~~~~~~~l~g----~~sL~el~ali~~-a~l~Vs~--- 267 (344)
T TIGR02201 201 RFSALIDALHAR--GYEVVLTSGPDKDELAMVN---EIAQGCQTPRVTSLAG----KLTLPQLAALIDH-ARLFIGV--- 267 (344)
T ss_pred HHHHHHHHHHhC--CCeEEEecCCCHHHHHHHH---HHHhhCCCCcccccCC----CCCHHHHHHHHHh-CCEEEec---
Confidence 344445555432 4566777654332222222 3333323222345677 6778999999997 9999998
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
++ ..+-=|-|.|+|+|+
T Consensus 268 DS--Gp~HlAaA~g~p~v~ 284 (344)
T TIGR02201 268 DS--VPMHMAAALGTPLVA 284 (344)
T ss_pred CC--HHHHHHHHcCCCEEE
Confidence 33 344557889999998
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.77 E-value=3.5 Score=48.83 Aligned_cols=140 Identities=12% Similarity=0.083 Sum_probs=84.3
Q ss_pred CCCccccccCCchhhhchhhH----HHHHHHHhhcCCC---c-cEEEEec---CChhhHHHHHHHHHHHHH----cCCCC
Q 005365 524 PGADMSIYFPYTEEKRRLKSF----HPEIEELLYSDVE---N-KEHLKES---KDLEEQAEMKKMYSLIDQ----YKLNG 588 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~L----l~Ai~~Ll~~~~~---~-~l~i~g~---Gd~ee~~~~~~l~~li~~----l~L~~ 588 (700)
|..-+++|+-|..+.||.... +.....++..... + .++++|- +|...+..++.+.++++. ..+.+
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~ 521 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGD 521 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCC
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhcc
Confidence 344456678888889988762 3445555554321 2 2333332 222333344444444432 23444
Q ss_pred --cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 589 --QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 589 --~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
+|.|+. |+ +=.+.+.+-.++||-.+-|+ .|+.|.+-+-||.-|.+.++|-.|...|+.+. .+|.|++-.
T Consensus 522 ~lkVvFle---nY--dvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~ 596 (713)
T PF00343_consen 522 RLKVVFLE---NY--DVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGL 596 (713)
T ss_dssp GEEEEEET---T---SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-
T ss_pred ceeEEeec---CC--cHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCC
Confidence 688886 22 44667777667999999875 79999999999999999999999999999864 458899864
Q ss_pred CCHHHHH
Q 005365 663 YHGEQAA 669 (700)
Q Consensus 663 ~D~eaLA 669 (700)
+.++..
T Consensus 597 -~~~ev~ 602 (713)
T PF00343_consen 597 -TAEEVE 602 (713)
T ss_dssp -BHHHHH
T ss_pred -CHHHHH
Confidence 455543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=90.59 E-value=14 Score=39.71 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=55.6
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
..+...+..+..... ..+.+..+.-.+. +..+.+.+..+ -.+.+.+.. .....-+..+|+. ||.+++..-
T Consensus 168 ~~l~~~l~~~~~~~~-~~~~vttSRRTp~-~~~~~L~~~~~---~~~~~~~~~----~~~~nPy~~~La~-ad~i~VT~D 237 (311)
T PF06258_consen 168 ERLLDQLAALAAAYG-GSLLVTTSRRTPP-EAEAALRELLK---DNPGVYIWD----GTGENPYLGFLAA-ADAIVVTED 237 (311)
T ss_pred HHHHHHHHHHHHhCC-CeEEEEcCCCCcH-HHHHHHHHhhc---CCCceEEec----CCCCCcHHHHHHh-CCEEEEcCc
Confidence 356666666666554 4566666654332 23344444332 335563333 2223446778886 999998843
Q ss_pred CCCccHHHHHHHHcCCCEEEcCCCC
Q 005365 622 YEAFGLTVVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT~~GG 646 (700)
.-.-+-||.++|+||..-...+
T Consensus 238 ---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 238 ---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ---cHHHHHHHHHcCCCEEEecCCC
Confidence 2223789999999999987665
|
The function of this family is unknown. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=89.70 E-value=30 Score=36.50 Aligned_cols=142 Identities=15% Similarity=0.083 Sum_probs=77.8
Q ss_pred ccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHH----------HHHHcCC--CCcEEEec
Q 005365 527 DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYS----------LIDQYKL--NGQFRWIS 594 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~----------li~~l~L--~~~V~flG 594 (700)
+..+|.++...-||+..+++.-+..++. +...-.+-|....+ +.+.-+.. .+.+..+ ..-+-.+|
T Consensus 184 nv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~--A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~ 260 (355)
T PF11440_consen 184 NVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP--AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYG 260 (355)
T ss_dssp EEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST--HHHHHHHTT--EEEE-CTGGGG---SSS--EEEES
T ss_pred ccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC--ceeeeecCCcccccCccccccCcccCCCCcceecc
Confidence 3457999999999999998888876654 44444554432221 22221111 0001111 12255666
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCC------CCCccHHHHHHHHcCC-CEEEcCCCCccc-------ccccCCeEEEE
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCKGGPAE-------IIVNGKSGYHI 660 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~------~E~fGl~vlEAMA~Gl-PVVAT~~GG~~E-------iI~dg~~G~lv 660 (700)
+.-++|....++. +...++-+. .+..-.+-+|..|||. ||+-+..|...- ++.+....+.+
T Consensus 261 ----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~ 335 (355)
T PF11440_consen 261 ----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYF 335 (355)
T ss_dssp ----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE
T ss_pred ----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEe
Confidence 5557899999987 655555442 3567889999999997 666654443332 34445567889
Q ss_pred CCCCHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFF 676 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll 676 (700)
+..|-++..++|.++.
T Consensus 336 De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 336 DENDLESTVEKLIEVA 351 (355)
T ss_dssp -TTSHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHh
Confidence 9999999999999885
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.38 E-value=1.8 Score=49.17 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=56.0
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCccccccc-CCeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~d-g~~G~lv 660 (700)
.++.+.+ +++..++.. .+++ ||.= +=-++++||+++|+|+|+. |.......+.+ -..|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 3466666 555555544 3665 4432 2235899999999999996 45555555643 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 661 DP-----YHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 661 ~p-----~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+. -+.++++++|.+++ .|++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 52 27899999999998 67655443
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=88.92 E-value=38 Score=36.71 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=32.1
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA 641 (700)
+.+.| ..+..|+..+++. |+++|-.- +- .+-=|-|.|+|+|+
T Consensus 244 ~~l~g----~~sL~el~ali~~-a~l~I~nD---TG--p~HlAaA~g~P~va 285 (348)
T PRK10916 244 RNLAG----ETQLEQAVILIAA-CKAIVTND---SG--LMHVAAALNRPLVA 285 (348)
T ss_pred eeccC----CCCHHHHHHHHHh-CCEEEecC---Ch--HHHHHHHhCCCEEE
Confidence 45556 6678999999997 99999873 22 34457789999998
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=88.44 E-value=4.5 Score=40.57 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=25.6
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
|||++....|+-. ..+. .|.++|++.||+|. |+++..
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDS 37 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCC
Confidence 8999999888732 2234 55667777789999 998764
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=87.78 E-value=0.89 Score=47.89 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCC--CCchhhh---hcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWK---NLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~--~~~~~w~---~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
+.||+|+.. ..++++|+.++.+.|+|++.|=|+....... -....|. ...+..........-+.+++.||.|++
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~~ 251 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRITP 251 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeecc
Confidence 579999954 5678899999999999999999998533211 0111222 000000011111124467999999999
Q ss_pred cCHHH
Q 005365 479 STFQE 483 (700)
Q Consensus 479 ~S~~~ 483 (700)
.+...
T Consensus 252 l~~~n 256 (268)
T PF11997_consen 252 LYEYN 256 (268)
T ss_pred cchhh
Confidence 99654
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.17 E-value=17 Score=43.58 Aligned_cols=137 Identities=10% Similarity=0.073 Sum_probs=92.8
Q ss_pred chhhhchhhHHHHHHHHhhcCCCcc----EEEEecCChhhHHHHHHHH----HHHHHc----CC--CCcEEEeccccCcC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVENK----EHLKESKDLEEQAEMKKMY----SLIDQY----KL--NGQFRWISSQMNRV 600 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~~----l~i~g~Gd~ee~~~~~~l~----~li~~l----~L--~~~V~flG~~~d~v 600 (700)
+...||...=+.++++++..++... +..+..+.....+..++++ ..+... +- ...|+++- ..+
T Consensus 285 ~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~ 361 (732)
T KOG1050|consen 285 LDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDL 361 (732)
T ss_pred cccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccC
Confidence 3445677666788888888776531 1112222111112122222 222211 11 12344443 467
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcC----CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~G----lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+..++..+++- +|+....++.+|..++.+|+.+|. ++.|.+..-|..+..++ ...++.|-|.++++..|..++
T Consensus 362 ~~~~l~a~~~V-aev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al 438 (732)
T KOG1050|consen 362 PFLELLALYKV-AEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWDGDEFAILISKAL 438 (732)
T ss_pred CHHHHhhhHHh-hhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECCcchHHHHHHHHHHh
Confidence 78899999996 999999999999999999999885 78999998888888755 357889999999999999988
Q ss_pred H
Q 005365 677 E 677 (700)
Q Consensus 677 ~ 677 (700)
.
T Consensus 439 ~ 439 (732)
T KOG1050|consen 439 T 439 (732)
T ss_pred h
Confidence 3
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=86.40 E-value=24 Score=36.89 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=48.4
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
....+.+.+..+....|+..+++.--.+..... .. ...++. +..+ +.++.. . ..++.++.. +|..+.
T Consensus 138 ~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~---~~-~~~~~~~~~~~-~~~~~~---~---~~~~~Ll~~-s~~Vvt 205 (269)
T PF05159_consen 138 SQADFLDMLESFAKENPDAKLVVKPHPDERGGN---KY-SYLEELPNLPN-VVIIDD---D---VNLYELLEQ-SDAVVT 205 (269)
T ss_pred cHhHHHHHHHHHHHHCCCCEEEEEECchhhCCC---Ch-hHhhhhhcCCC-eEEECC---C---CCHHHHHHh-CCEEEE
Confidence 344556667777766666666664433211000 00 222222 3333 444431 2 345677776 776665
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEc
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
- .+.+-+||+.+|+||++-
T Consensus 206 i-----nStvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 206 I-----NSTVGLEALLHGKPVIVF 224 (269)
T ss_pred E-----CCHHHHHHHHcCCceEEe
Confidence 5 367889999999999995
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=86.11 E-value=6.7 Score=42.65 Aligned_cols=153 Identities=13% Similarity=0.190 Sum_probs=104.9
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC--CCcEEEeccccCcCChhHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMNRVRNGEL 605 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L--~~~V~flG~~~d~v~~~el 605 (700)
..+|-|++.--|.-..-+-+.+++-+..|+.-.++.....- ...+-..+...+..+.+ .++..|.| + =++
T Consensus 192 vavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~-~~ke~~~F~~f~~~ldlvr~gkasfeg----R---~~~ 263 (364)
T PF10933_consen 192 VAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTY-HLKEHPTFVNFANSLDLVRDGKASFEG----R---FDF 263 (364)
T ss_pred EEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecch-hhhcCHHHHHHHHhhHHhhcCeeEEee----e---cCh
Confidence 34455555555554444445555555555543333222211 11333556666666665 67789999 3 245
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
+.++++..|+.|.=.+.-+....-.||+--|=|.|-- +..+. ++|+..+..|..+=++++.+.+. +..+.
T Consensus 264 p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~--d~GYYY~~fD~~~G~r~L~~A~~---~HD~~ 333 (364)
T PF10933_consen 264 PDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLK--DVGYYYPDFDAFEGARQLLRAIR---EHDAD 333 (364)
T ss_pred HHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhc--ccCcCCCCccHHHHHHHHHHHHH---Hcccc
Confidence 7888888999998888778888999999999999873 34553 38999999999999999999985 66777
Q ss_pred HHHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRIE 698 (700)
Q Consensus 686 ~~~ms~~ar~ra~ 698 (700)
++...++|++.+.
T Consensus 334 ~~~Y~~ra~~~l~ 346 (364)
T PF10933_consen 334 LDAYRARARRLLD 346 (364)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877654
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=86.09 E-value=9.7 Score=41.66 Aligned_cols=225 Identities=15% Similarity=0.111 Sum_probs=97.8
Q ss_pred CeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 406 PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 406 pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
..+++.+........ .....+.++|.+.|+. +.+.. .+...... .... .-....+..|.++++|+...+
T Consensus 79 Ak~~i~~~~~~~~~~--~~~~~~~~~i~lwHG~-~~K~~----g~~~~~~~-~~~~---~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 79 AKYIISDSYFPDLIY--FKKRKNQKYIQLWHGI-PLKKI----GYDSPDNK-NYRK---NYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp EEEEEESS---T--T--S---TTSEEEE--SS---SB------GGG-S----TS-H---HHHHHHTT-SEEEESSHHHHH
T ss_pred CcEEEECCCCCcccc--cccCCCcEEEEecCCC-ccccc----chhccccc-cchh---hhhhhccCCcEEEECCHHHHH
Confidence 578888643333211 2334578999999998 43311 00000000 0000 112357778999999988877
Q ss_pred hhhhhhccccccccccCCCeEEeecCCCCCCC-----cce--------ecCCCCccccccCCchhhhch------h--hH
Q 005365 486 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP-----KFN--------IVSPGADMSIYFPYTEEKRRL------K--SF 544 (700)
Q Consensus 486 ~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~-----k~~--------vIp~G~d~~~F~g~~~~~Kgl------~--~L 544 (700)
.+++.++.-. -..+..|.+-++. ... -++.+...++|.|.-+..... . .-
T Consensus 148 ~~~~~f~~~~---------~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~ 218 (369)
T PF04464_consen 148 IFKKAFGYPE---------DKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD 218 (369)
T ss_dssp HHHHHTT--G---------GGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-
T ss_pred HHHHHhccCc---------ceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC
Confidence 6666554221 1223344441110 000 023344467888754333222 1 11
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 623 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 623 (700)
.+.+..+. ..+..++...-... ...... ....++|.++.. ..+++.++.. +|++|.=
T Consensus 219 ~~~l~~~~----~~~~~li~k~Hp~~-------~~~~~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLITD---- 276 (369)
T PF04464_consen 219 FEKLNFLL----KNNYVLIIKPHPNM-------KKKFKDFKEDNSNIIFVSD------NEDIYDLLAA-ADILITD---- 276 (369)
T ss_dssp HHHHHHHH----TTTEEEEE--SHHH-------HTT----TT-TTTEEE-TT-------S-HHHHHHT--SEEEES----
T ss_pred HHHHHHHh----CCCcEEEEEeCchh-------hhchhhhhccCCcEEECCC------CCCHHHHHHh-cCEEEEe----
Confidence 22332222 22334443332211 111111 334567887651 2368888886 9999875
Q ss_pred CccHHHHHHHHcCCCEEEc--CC-------CCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 624 AFGLTVVEAMTCGLPTFAT--CK-------GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 624 ~fGl~vlEAMA~GlPVVAT--~~-------GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
++-++.|++.+++|||-- |. |...++ .+...|-.+. +.++|.++|..++
T Consensus 277 -ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 277 -YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp -S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred -chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCCCceeC--CHHHHHHHHHhhh
Confidence 677999999999999953 32 333332 2333455664 8899999998877
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=84.53 E-value=56 Score=34.27 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=49.9
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
.+..++.+.+... ...+.+.-+.-.+ +..+.+++. +.-..-+.|-+.-.+. .-...+++. ||.++...-
T Consensus 184 q~~~~l~k~l~~~-g~~~lisfSRRTp-----~~~~s~l~~~l~s~~~i~w~~~d~g~---NPY~~~La~-Adyii~TaD 253 (329)
T COG3660 184 QFASLLVKILENQ-GGSFLISFSRRTP-----DTVKSILKNNLNSSPGIVWNNEDTGY---NPYIDMLAA-ADYIISTAD 253 (329)
T ss_pred HHHHHHHHHHHhC-CceEEEEeecCCc-----HHHHHHHHhccccCceeEeCCCCCCC---CchHHHHhh-cceEEEecc
Confidence 4444444444322 2344454444333 233444443 4434446666542222 245667775 999998854
Q ss_pred CCCccHHHHHHHHcCCCEEEcCCCC
Q 005365 622 YEAFGLTVVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT~~GG 646 (700)
.- .-.-||.+.|+||++-.-.+
T Consensus 254 Si---nM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 254 SI---NMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred hh---hhhHHHhccCCCeEEEecCC
Confidence 22 23579999999999964433
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=84.44 E-value=63 Score=34.70 Aligned_cols=81 Identities=12% Similarity=0.000 Sum_probs=48.2
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++ +.+..+++ .+..+ ...+.+.| ..+..++..+++. +|++|..-
T Consensus 195 ~~~~li~~l~~~--~~~ivl~G~~~--e~~~~~~i---~~~~~-~~~~~l~g----~~sL~el~ali~~-a~l~I~~D-- 259 (334)
T TIGR02195 195 HYAELAKRLIDQ--GYQVVLFGSAK--DHPAGNEI---EALLP-GELRNLAG----ETSLDEAVDLIAL-AKAVVTND-- 259 (334)
T ss_pred HHHHHHHHHHHC--CCEEEEEEChh--hHHHHHHH---HHhCC-cccccCCC----CCCHHHHHHHHHh-CCEEEeeC--
Confidence 444555555432 35566666542 22222233 22221 12234666 6678999999997 99999883
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
+- .+-=|-|.|+|+|+
T Consensus 260 -SG--p~HlAaA~~~P~i~ 275 (334)
T TIGR02195 260 -SG--LMHVAAALNRPLVA 275 (334)
T ss_pred -CH--HHHHHHHcCCCEEE
Confidence 22 34456789999998
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=82.58 E-value=26 Score=36.70 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=23.7
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|.+-+...|+|-+....
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3458999998 22 22344566677778999887654
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.48 E-value=2.5 Score=48.36 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=44.5
Q ss_pred HHHHHHHHcCCCEEEc----CCCCccccc-ccCCeEEEECC-------CCHHHHHHHHHHHHHhccCCHH-HHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFAT----CKGGPAEII-VNGKSGYHIDP-------YHGEQAAEILVDFFEKCKADPS-YWDKISLGG 693 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT----~~GG~~EiI-~dg~~G~lv~p-------~D~eaLAeaI~~ll~~~~~dp~-~~~~ms~~a 693 (700)
++++||+++|+|+|+- |..-....+ +.-..|+-+.. -+.++++++|.+++ .+++ ..+++++++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a 443 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREKA 443 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHH
Confidence 5899999999999995 444445444 33356776642 25789999999998 5543 255555555
Q ss_pred HHH
Q 005365 694 LKR 696 (700)
Q Consensus 694 r~r 696 (700)
.+.
T Consensus 444 ~~~ 446 (480)
T PLN00164 444 AEM 446 (480)
T ss_pred HHH
Confidence 544
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=80.07 E-value=7.7 Score=44.40 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=57.4
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccccC-CeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~dg-~~G~lv~ 661 (700)
.+++.+.+ +++..++..- . +.++||.= -| -++++||+.+|+|+|+.. .......+.+. ..|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 35566665 5555555531 1 24455543 22 358999999999999964 33444444443 5676662
Q ss_pred -----C--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 -----P--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 -----p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
. -+.++++++|.+++ .++ ..++|+++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHHH
Confidence 1 25789999999998 443 244555555544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 700 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 4e-30 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 2e-04 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 3e-04 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 700 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 0.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-129 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 1e-31 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 3e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 4e-15 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 3e-14 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 5e-13 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 4e-12 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 4e-10 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 7e-09 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 7e-08 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 2e-07 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 2e-05 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 1e-04 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 916 bits (2369), Expect = 0.0
Identities = 584/749 (77%), Positives = 644/749 (85%), Gaps = 50/749 (6%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEE 121
L G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+HALVVEEL AE+LHFKEE
Sbjct: 64 LEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+F
Sbjct: 124 LVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GKN+ML+++IQNLN+LQH LRKAEEYL + ET + E +F+EIGLERGWG
Sbjct: 184 LRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG 243
Query: 242 DTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
D AER L+MI+LLLDLLEAPDPCTLETFLGR+PMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+I P+ILI+TRLLPDAVGTTCG+RLE+VY ++Y D
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLETYTED AVE++KEL GKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTAD+ AMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSK+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL
Sbjct: 484 QEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHLK-------------------------------------- 563
FH EIEELLYSDVENKEHL
Sbjct: 544 TKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL 603
Query: 564 ------------ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 611
ESKD EE+AEMKKMY LI++YKLNGQFRWISSQM+RVRNGELYRYICD
Sbjct: 604 ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICD 663
Query: 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671
TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+
Sbjct: 664 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADT 723
Query: 672 LVDFFEKCKADPSYWDKISLGGLKRIEEK 700
L DFF KCK DPS+WD+IS GGL+RIEEK
Sbjct: 724 LADFFTKCKEDPSHWDEISKGGLQRIEEK 752
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 392 bits (1008), Expect = e-129
Identities = 115/479 (24%), Positives = 182/479 (37%), Gaps = 85/479 (17%)
Query: 270 LGRIPMVFNVVILTPHGYFAQDDVLG--YPDTGGQVVYILDQVRALEDEMLLRIKQQGLD 327
+ + + +V L P G F D +PD GGQ+VY+ + AL + G+
Sbjct: 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALA--------EMGVQ 52
Query: 328 ITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYL 387
+ IITR + D ++ T I+R+PF +K ++ + E+WPYL
Sbjct: 53 VD----IITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYL 103
Query: 388 ETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSD 447
Y + +E P ++ +Y DG + LL + G+ H+L K +
Sbjct: 104 HEYVNKII-NFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 448 IY---WKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG 504
+ +K +D+++ F + A+ + M++ D II ST QE GQY
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERF------GQYS-------HD 209
Query: 505 LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD--------- 555
LYR ++ D KF+++ PG + ++ +K + K +L
Sbjct: 210 LYRGAVNVED-DDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIAS 268
Query: 556 ----------------------------------VENKEHLKESKDLEEQAEMKKMYSLI 581
+EN EE+ + K+ LI
Sbjct: 269 SRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELI 328
Query: 582 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 641
D G+ + Y Y+ F + YE FGL VEAM GLP
Sbjct: 329 DNNDCRGKVSMFPLNSQQELA-GCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVV 387
Query: 642 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
T GGPAEI+ GK G +DP E A L+ F W G +R+EE+
Sbjct: 388 TRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAYQEKGKQRVEER 442
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-31
Identities = 78/454 (17%), Positives = 146/454 (32%), Gaps = 93/454 (20%)
Query: 274 PMVFNVVILTPHGY-FAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQI 332
M V +++ H Q G D+GG VYIL L +QG+++
Sbjct: 20 HM--RVAMISMHTSPLQQ---PGTGDSGGMNVYILSTATEL--------AKQGIEVD--- 63
Query: 333 LIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE 392
I TR A + G+ + ++ + + +S+ E+ L +T
Sbjct: 64 -IYTR----ATRPSQGEIVRVAENL---RVINIAAGP-----YEGLSKEELPTQLAAFTG 110
Query: 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKN 452
+ + + DLI +Y V LL + AH L K +++
Sbjct: 111 GML-SFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-----YRD 164
Query: 453 LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512
D + + +++ D + +T +E+ ++H
Sbjct: 165 DSDTPESEARRICEQQLVDNADVLAVNTQEEMQ---------------------DLMHHY 203
Query: 513 DVFDPKFNIVSPGADMSIYFPY----TEEKRRLKSFHPEIEELLYS--DVENK------- 559
D + ++VSPGAD+ +Y P TE RR + + + K
Sbjct: 204 DADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIK 263
Query: 560 ---EHLKESKDLE-----------EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGEL 605
D A + ++ + + R++ + +
Sbjct: 264 AVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELV-AV 322
Query: 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665
YR D P+ E+FGL +EA G P A GG + G++G +D +
Sbjct: 323 YR-AAD---IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSP 378
Query: 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
A+ L D ++ ++
Sbjct: 379 HAWADALATLL----DDDETRIRMGEDAVEHART 408
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-19
Identities = 71/425 (16%), Positives = 135/425 (31%), Gaps = 99/425 (23%)
Query: 296 YPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355
YP GG V + + L ++G +I IT LP + + +Y
Sbjct: 23 YPSVGGSGVVGTELGKQL--------AERGHEIH----FITSGLPFRLN----KVYPNIY 66
Query: 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD 415
V S F+ PY +A E+A+ D++ +Y+
Sbjct: 67 ------FHEVTVNQ--------YSVFQYPPYDLALASKMA-EVAQR--ENLDILHVHYAI 109
Query: 416 GNIVASLLAHKLGVTQCTI---AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472
+ + + LA ++ + I H + T +L++ F
Sbjct: 110 PHAICAYLAKQMIGERIKIVTTLHGTDITVLG----SDPSLNNLIRFGI---------EQ 156
Query: 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 532
+D + V L H + + V D +YF
Sbjct: 157 SDVVTA------------VSHS----------LINETHELVKPNKDIQTVYNFIDERVYF 194
Query: 533 PYTEEKRRLKSFHPEIEELLYS---DVENK---------EHLKESKDLE-----EQAEMK 575
+ + + E E++L + K + D + + E
Sbjct: 195 KRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFC 254
Query: 576 KMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC 635
+ L+ + + ++ Q N EL + D + + E+FGL ++EAM C
Sbjct: 255 TILQLVKNLHIEDRVLFLGKQDNVA---ELLA-MSD---LMLLLSEKESFGLVLLEAMAC 307
Query: 636 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695
G+P T GG E+I +G +GY + A+ + + D + +
Sbjct: 308 GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK----DEELHRNMGERARE 363
Query: 696 RIEEK 700
+ E+
Sbjct: 364 SVYEQ 368
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 91.8 bits (227), Expect = 3e-19
Identities = 90/717 (12%), Positives = 206/717 (28%), Gaps = 240/717 (33%)
Query: 23 HRNEILALLSRIEGKGKGILQNHQ--LIAEFE--SISEENRKHLTEGAFGEVLRA--TQE 76
H + + + + K IL + + F+ + + + L++ ++ +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 77 AIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELD 136
+ W L + V ++ VEE+L Y F++
Sbjct: 63 GTLRLFWT-LLSKQEEMVQKF---------VEEVLRINY--------------KFLMS-- 96
Query: 137 FEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLND 196
P +P++ ++ + +L++D + V
Sbjct: 97 --PIKTEQRQPSM-----MTRMYIEQR--DRLYNDNQVFAKY----NV-----------S 132
Query: 197 RIQNLNSLQHVLRKA--EEYL----------TTVVPETPFSELALRFQEIGLERG----W 240
R+Q L+ L + + + T V + ++ + W
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD------VCLSYKVQCKMDFKIFW 186
Query: 241 ---G--DTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLG 295
++ E LEM+Q LL ++ P+ + I + + +
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP--- 242
Query: 296 YPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR-----------------L 338
Y + + +L V+ + +++ +IL+ TR L
Sbjct: 243 YENC----LLVLLNVQ---NAKAWN----AFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 339 LPDAVGTTCGQRLE---KVYGTKYSDILRVPFRTEKG----------VVRKWISRFEVWP 385
++ T + K + D+ P +R ++ ++ W
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDL---PREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 386 YLETYTEDVAVEIAKELQGKPDLIIGNY-------SDGNIVASLLAHKLGVTQCTIAHAL 438
++ +E + + +P + +I LL+
Sbjct: 349 HVNCDKLTTIIESSLNVL-EPAEYRKMFDRLSVFPPSAHIPTILLS-------------- 393
Query: 439 EKTKYPDSDIYWKNLD--DKYHFSCQF-TADLIAMNHTDFIIT--STFQEIAGSKDTVGQ 493
+ W ++ D + L+ + I+ S + E+ + +
Sbjct: 394 ---------LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE--NE 442
Query: 494 YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553
Y H ++ Y + FD +++ P D YF Y H + +
Sbjct: 443 YALHR--SIVDHYNI---PKTFDSD-DLIPPYLDQ--YF-Y---------SH-----IGH 479
Query: 554 SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI--------------SSQMNR 599
HLK + E + ++ L+ FR++ S +N
Sbjct: 480 -------HLKNIEHPERMTLFRMVF-------LD--FRFLEQKIRHDSTAWNASGSILNT 523
Query: 600 VRNGELYR-YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK 655
++ + Y+ YICD + E + + F E ++ K
Sbjct: 524 LQQLKFYKPYICDNDPKY--------------ERLVNAILDFLP---KIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 75/453 (16%), Positives = 126/453 (27%), Gaps = 160/453 (35%)
Query: 8 RVHSLRERLDETLSAHRNEILALLSRIEGKGKGIL---QNHQLIAEF------------- 51
R+HS++ L L + E LL +L QN + F
Sbjct: 226 RIHSIQAELRRLLKSKPYEN-CLL---------VLLNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 52 ---ESISEENRKHL-------------TEGAFGEVLRATQEAIVLPP-----------WV 84
+ +S H+ + + L + LP +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD--LPREVLTTNPRRLSII 333
Query: 85 ALAVRPRPGVWEYIR-VNVHALV------VEELLVAEYLHFKEELVDGGSNGNFVLELDF 137
A ++R W+ + VN L + L AEY + L V
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--------VF---- 381
Query: 138 EPFNASFPRPTLS----KSIGNGVE-----FLNRHLSAKLFHDKE---SMHPLLEFLRVH 185
P +A P LS I + V L K KE S+ + +L +
Sbjct: 382 -PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK--QPKESTISIPSI--YLELK 436
Query: 186 CHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIG--LERGWGDT 243
L+ I ++ + L + F + IG L+ +
Sbjct: 437 VKLENEYALHRSI--VDHYNIPKTFDSDDLIPPYLDQYF------YSHIGHHLKNI--EH 486
Query: 244 AERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQV 303
ER + LD FL + + + A +L +T Q+
Sbjct: 487 PERMTLFRMVFLDF----------RFLEQ------KIRHDSTAWNASGSIL---NTLQQL 527
Query: 304 V----YILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKY 359
YI D + E L+ I LP E + +KY
Sbjct: 528 KFYKPYICDNDP--KYERLVNA-------------ILDFLP-----KIE---ENLICSKY 564
Query: 360 SDILRVPFRTEKGVVRKWISRFEVWPYLETYTE 392
+D+LR+ E + + E + +
Sbjct: 565 TDLLRIALMAEDEAI-----------FEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 4e-07
Identities = 80/593 (13%), Positives = 165/593 (27%), Gaps = 180/593 (30%)
Query: 34 IEGKGKGILQNHQLIAEFESI-SEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPR- 91
++ K IL E + I ++ T F L + QE +V +V +R
Sbjct: 38 VQDMPKSILSK----EEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMV-QKFVEEVLRINY 91
Query: 92 PGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSK 151
+ I+ ++ Y+ ++ L N N V F +N R
Sbjct: 92 KFLMSPIKTEQRQ---PSMMTRMYIEQRDRL----YNDNQV----FAKYNV--SRLQPYL 138
Query: 152 SIGNGVEFLNRH---------------LSAKLFHDKESMHPLLEFLRVH------CHKGK 190
+ + L ++ + + + ++F ++ C+
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK-VQCKMDF-KIFWLNLKNCNSP- 195
Query: 191 NMMLNDRIQNLNSLQHVLRK--AEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERAL 248
++ L L + + + + + + + + + E L
Sbjct: 196 ----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCL 247
Query: 249 EMIQLLLD------LLEAPDP-C-TLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
L+L A + C L T R V + + + + D T
Sbjct: 248 ----LVLLNVQNAKAWNAFNLSCKILLT--TRFKQVTDFLSAATTTHISLDHHSM-TLTP 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQIL-IITRLLPDAVGTTCGQRLEKVYGTKY 359
+V +L + + L ++ L P+ L II + D + T + V K
Sbjct: 301 DEVKSLLLKYLDCRPQDL---PREVLTTNPRRLSIIAESIRDGLATW--DNWKHVNCDKL 355
Query: 360 SDILRV------P------------FR-----TEKGVVRKW--ISRFEV----------- 383
+ I+ P F + W + + +V
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 384 ----WPYLETYT-EDVAVEIAKELQGKPDL---IIGNYS---------------DGNIVA 420
P T + + +E+ +L+ + L I+ +Y+ D
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-Y 474
Query: 421 SLLAHKLGVT-------------------QCTIAHA----------------LEK-TKY- 443
S + H L + I H L+ Y
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 444 -PDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYE 495
+ Y + ++ F + +LI +TD + IA + +E
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLL------RIALMAEDEAIFE 581
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 4e-15
Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 570 EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629
K + + + Y + I V R D +Q ++ E FGLTV
Sbjct: 279 WIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN--AFQR-ASD---VILQMSIREGFGLTV 332
Query: 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689
EAM G P GG IV+G++G+ + +A E+++ + P ++
Sbjct: 333 TEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRD--ANEAVEVVLYLLK----HPEVSKEM 386
Query: 690 SLGGLKRIEEK 700
+R+ +
Sbjct: 387 GAKAKERVRKN 397
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-14
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663
+LY C + A E FGLT +EAM G P A +GG E ++N K+GY ++
Sbjct: 93 DLYS-RCK---GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA- 147
Query: 664 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
++D +K +P DK +R +E
Sbjct: 148 ----DVNEIIDAMKKVSKNP---DKFKKDCFRRAKE 176
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 5e-13
Identities = 69/426 (16%), Positives = 121/426 (28%), Gaps = 103/426 (24%)
Query: 296 YPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR----LLPDAVGTTCGQRL 351
Y GG + + +G + + T+ P A
Sbjct: 10 YFPFGGLQRDFMRIASTV--------AARGHHVR----VYTQSWEGDCPKAF-------- 49
Query: 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIG 411
++++VP + Y V + + D ++G
Sbjct: 50 ---------ELIQVPVK-----------SHTNHGRNAEYYAWVQNHLK---EHPADRVVG 86
Query: 412 NYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471
+ A A + + K L +Y F
Sbjct: 87 FNKMPGLDVYFAADVCY------AEKVAQEKGF-----LYRLTSRYRHYAAFERATFEQG 135
Query: 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFDPKFNIVSPGADMSI 530
+ ++ T ++IA D Y++ P ++++ GI D K++ P +
Sbjct: 136 KSTKLMMLTDKQIA---DFQKHYQTE-----PERFQILPPGIYP-DRKYSEQIPNS---- 182
Query: 531 YFPYTEEKRRLKSFHPEIEELLY--SDVENK---------EHLKESKDLE------EQAE 573
E R+ + LL SD K L ES Q +
Sbjct: 183 ----REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK 238
Query: 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM 633
+K +L ++ + + S + N V EL D + PA EA G+ ++EA+
Sbjct: 239 PRKFEALAEKLGVRSNVHFFSGR-NDVS--ELMA-AAD---LLLHPAYQEAAGIVLLEAI 291
Query: 634 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693
T GLP T G A I + G I Q L + K +
Sbjct: 292 TAGLPVLTTAVCGYAHYIADANCGTVI-AEPFSQEQ--LNEVLRKALTQSPLRMAWAENA 348
Query: 694 LKRIEE 699
+
Sbjct: 349 RHYADT 354
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 67.9 bits (165), Expect = 4e-12
Identities = 47/323 (14%), Positives = 94/323 (29%), Gaps = 57/323 (17%)
Query: 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPD-SDIYWKNLDDKYHFSCQF 463
KPD+++ Y+D ++ + L + +TK D+ KN+ + +
Sbjct: 81 KPDIVMI-YNDPIVIGNYLLA--------MGKCSHRTKIVLYVDLVSKNIRENLWW---- 127
Query: 464 TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV----FDPKF 519
+ + ++ SK + ++ + V H +D K
Sbjct: 128 ---IFSHPKVVGVMAM-------SKCWISDICNY--GCKVPINIVSHFVDTKTIYDARKL 175
Query: 520 NIVSPGADMSIYFPYTEEKRR---------LKSFHPEIEELLYSDVENKEHLKESKDLEE 570
+S D ++ R F + + + N H +
Sbjct: 176 VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI 235
Query: 571 QAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV 630
+ + + + + + R +Y CD V + E FGL
Sbjct: 236 ALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYN-ACD---VIVNCSSGEGFGLCSA 291
Query: 631 EAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP--------YHGEQAAEILVDFFEKCKA- 681
E G P + GG + +G Y I P G E ++D + +A
Sbjct: 292 EGAVLGKPLIISAVGGADD-YFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350
Query: 682 ----DPSYWDKISLGGLKRIEEK 700
D + ++ K
Sbjct: 351 TFFKDEKNRKEYGKRVQDFVKTK 373
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 4e-10
Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 18/130 (13%)
Query: 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQPALYEAFGLTVV 630
+ KK+ L + + +F +++S EL + C +V A E+ + +
Sbjct: 43 DEKKIKLLAQKLGVKAEFGFVNSN-------ELLEILKTCT---LYVHAANVESEAIACL 92
Query: 631 EAMTCGLPT-FATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689
EA++ G+ A + +P + + + + + E + +++
Sbjct: 93 EAISVGIVPVIANSPLSATRQFALDE-RSLFEPNNAKDLSAKIDWWLE----NKLERERM 147
Query: 690 SLGGLKRIEE 699
K
Sbjct: 148 QNEYAKSALN 157
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 7e-09
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 615 AFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673
+ P L E+FG+ +VEAM G A+ ++ +G +G + + A L+
Sbjct: 285 VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALI 344
Query: 674 DFFEKCKADPSYWDKISLGGLKRIEE 699
D +R+
Sbjct: 345 GIL----EDDQLRAGYVARASERVHR 366
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 7e-08
Identities = 20/209 (9%), Positives = 56/209 (26%), Gaps = 15/209 (7%)
Query: 498 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSF----HPEIEELLY 553
F L + + P + ++ +++++ K P ++ +
Sbjct: 198 AVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKEKIILVYGRPSVKRNAF 257
Query: 554 SD-VENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR-WISSQMNRVRNGELYRYICD 611
+ VE + + D + ++ + L ++ +L +
Sbjct: 258 TLIVEALKIFVQKYDRSNEWKIISVGEKHKDIALGKGIHLNSLGKLTLEDYADLLK-RSS 316
Query: 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671
+ + +E GL K ++ + ++ + E AE
Sbjct: 317 ---IGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAET 372
Query: 672 LVDFFEKCKADPSYWDKISLGGLKRIEEK 700
LV+ + D +
Sbjct: 373 LVELCM----SFNNRDVDKKESSNMMFYI 397
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 615 AFVQPAL-------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 667
F PA E G+ +EA CG+P A GG E + +G ++ ++
Sbjct: 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDK 333
Query: 668 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700
+E+L++ DP + G +E +
Sbjct: 334 LSELLIELL----DDPIRRAAMGAAGRAHVEAE 362
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 12/64 (18%), Positives = 15/64 (23%)
Query: 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670
E V EA G P T G AEI+ + A
Sbjct: 240 QAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEAR 299
Query: 671 ILVD 674
+
Sbjct: 300 RTLA 303
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 1e-04
Identities = 13/58 (22%), Positives = 19/58 (32%)
Query: 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663
Y V P+ YE +G T E G+P+ T G + + Y
Sbjct: 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDY 569
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 700 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.98 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.98 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.94 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.92 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.91 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.91 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.91 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.9 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.89 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.87 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.86 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.86 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.85 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.85 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.75 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.73 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.7 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.64 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.63 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.62 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.59 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.58 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.56 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.56 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.54 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.49 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.32 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.16 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.14 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.13 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.12 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.05 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.95 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.89 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.82 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.8 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.68 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.66 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.87 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.8 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.75 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.74 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.68 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.06 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 96.97 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 96.95 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 96.85 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 94.3 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 92.73 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-160 Score=1410.32 Aligned_cols=696 Identities=79% Similarity=1.267 Sum_probs=642.0
Q ss_pred cccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhcccCCCcHHHHHhhcceeeEcCCe
Q 005365 4 RALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 83 (700)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (700)
++|+|++||+|+++++|++||++|++||++|+++||+||++|||+++|++++++++.++.+|+||++|++||||||.|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (816)
T 3s28_A 6 RMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPW 85 (816)
T ss_dssp ---------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTTSCGGGCCCSTHHHHHHTEEEEEECSSE
T ss_pred cccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhhhcccccCcHHHHHHhhhheeecCCe
Confidence 68999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHh
Q 005365 84 VALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRH 163 (700)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (700)
||||||||||+|||||||++||+||+||++|||+|||+|||++.+++++||+||+|||++||++++|+||||||+|||||
T Consensus 86 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (816)
T 3s28_A 86 VALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRH 165 (816)
T ss_dssp EEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHHH
T ss_pred EEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCcc
Q 005365 164 LSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDT 243 (700)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 243 (700)
||||||+|++++++||+||+.|+|+|++|||||||+|+++|++||++|++||+++|+||||++|+++||+||||||||||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (816)
T 3s28_A 166 LSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDN 245 (816)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCSB
T ss_pred HHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 005365 244 AERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQ 323 (700)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~ 323 (700)
|+||+|||++|+++|++|||++||+|++|+||+|||+|+|+|||++|.+++|+||||||++||+||||||+++|+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~ 325 (816)
T 3s28_A 246 AERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQ 325 (816)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcC
Q 005365 324 QGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQ 403 (700)
Q Consensus 324 ~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~ 403 (700)
+||+|+|+|+|+|+.+++..++.|+++.+.+.++++++|+|+|+++.++++++|+++..+|+|+..|+..+.+.+....+
T Consensus 326 ~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~ 405 (816)
T 3s28_A 326 QGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELN 405 (816)
T ss_dssp TTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCS
T ss_pred CCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999989999999999999999999999999988788899999999999999999888887777767
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
++|||||+|++.+++++.++++++|+|+|+|.|++...++..++..|..+...|++.+++.+|+.+++.||.||++|.++
T Consensus 406 ~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 78999999999999999999999999999999999888888778889888889999999999999999999999999999
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCcccc---------------------------------
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI--------------------------------- 530 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~--------------------------------- 530 (700)
++.+++.+++|..+..+++|+++++.+||+.+.+++.+||||+|...
T Consensus 486 ~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg 565 (816)
T 3s28_A 486 IAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLC 565 (816)
T ss_dssp HHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEES
T ss_pred HHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhc
Confidence 98888888999998899999999999999999999999999988543
Q ss_pred -----------ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCC------hhhHHHHHHHHHHHHHcCCCCcEEEe
Q 005365 531 -----------YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKD------LEEQAEMKKMYSLIDQYKLNGQFRWI 593 (700)
Q Consensus 531 -----------F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd------~ee~~~~~~l~~li~~l~L~~~V~fl 593 (700)
|+|++.+.||++.+++|+..+....++..++++|.|. .++.++.++++++++++++.++|+|+
T Consensus 566 ~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 566 VLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp CBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred ccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4566677899999999999988766678899998876 23445778999999999999999999
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
|++++.++.+++++++++++|+||+||.+|+||++++||||||+|||+|+.||++|++.++.+|++++|+|++++|++|.
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~ 725 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLA 725 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHH
Confidence 99888888899999999658999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 674 DFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 674 ~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++++..|++.+++|+++|++++.+
T Consensus 726 ~lL~~Ll~d~~~~~~m~~~ar~~a~~ 751 (816)
T 3s28_A 726 DFFTKCKEDPSHWDEISKGGLQRIEE 751 (816)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 98877778999999999999999854
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=374.83 Aligned_cols=395 Identities=26% Similarity=0.380 Sum_probs=284.7
Q ss_pred CcceEEEEEccccccccCC--cCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccce
Q 005365 274 PMVFNVVILTPHGYFAQDD--VLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRL 351 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~--~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~ 351 (700)
.|+|||++++++++|.... +.+.+..||.++++. +|+++|+++||+|+ |+|..........+....
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGEI 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCSE
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhhH
Confidence 3458999999998875422 234577899999999 66667799999999 998654321101122223
Q ss_pred eEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE
Q 005365 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (700)
Q Consensus 352 e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~ 431 (700)
+.+....+++++++|..... +..+..+|.++..+...+.+.+++. ..+|||||+|.+..++++.++++..++|+
T Consensus 73 ~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p~ 146 (499)
T 2r60_A 73 DYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLPF 146 (499)
T ss_dssp EECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCCE
T ss_pred HhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCcE
Confidence 33312347899999875432 1233445666655555566666553 23799999998777778888888899999
Q ss_pred EEEecCCccccCC---CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhh--hccccccccccCCCeE
Q 005365 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT--VGQYESHTAFTLPGLY 506 (700)
Q Consensus 432 V~t~H~l~~~~~~---~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~--~~~y~~~~~~~~p~l~ 506 (700)
|++.|+....... ........+...+++......++.+++.||.||++|...++.+.+. ++...+ ......+.
T Consensus 147 v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~--~~~~~ki~ 224 (499)
T 2r60_A 147 TFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVN--VEDDDKFS 224 (499)
T ss_dssp EEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCC--TTCGGGEE
T ss_pred EEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhccccccc--ccCCCCeE
Confidence 9999997433211 0000001111122222333346788999999999998776544333 220000 00112467
Q ss_pred EeecCCCCCCCccee--------------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc-cEEEEec
Q 005365 507 RVVHGIDVFDPKFNI--------------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN-KEHLKES 565 (700)
Q Consensus 507 ~v~nGId~~~~k~~v--------------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~-~l~i~g~ 565 (700)
+++||++. ..+.. ++++....+|+|++.+.||++.+++|+..+....++. .++++|.
T Consensus 225 vi~ngvd~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~ 302 (499)
T 2r60_A 225 VIPPGVNT--RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRG 302 (499)
T ss_dssp ECCCCBCT--TTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESS
T ss_pred EECCCcCh--hhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 88999984 22221 3445567889999999999999999999887653333 5777776
Q ss_pred CChh----------hHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccC----cEEEeCCCCCCccHHHHH
Q 005365 566 KDLE----------EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTK----GAFVQPALYEAFGLTVVE 631 (700)
Q Consensus 566 Gd~e----------e~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~a----DvfV~PS~~E~fGl~vlE 631 (700)
++++ +.++.++++++++++++.++|+|+| .++.+++..+|+. + |++|+||.+|+||++++|
T Consensus 303 ~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lE 377 (499)
T 2r60_A 303 IENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQELAGCYAY-LASKGSVFALTSFYEPFGLAPVE 377 (499)
T ss_dssp CSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHHHHHHHHH-HHHTTCEEEECCSCBCCCSHHHH
T ss_pred CCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHHHHHHHHHh-cCcCCCEEEECcccCCCCcHHHH
Confidence 3332 3344788999999999999999999 6667899999997 9 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 632 AMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 632 AMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 378 Ama~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 378 AMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp HHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 8999999999999998865
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=342.52 Aligned_cols=374 Identities=18% Similarity=0.221 Sum_probs=266.2
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
.+|||++++.+++|.. .+|.+..||.++++. +|+++|+++||+|+ |+|....... ...+..
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 4689999998877632 234457899999999 66667799999999 9886532110 011112
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t 434 (700)
.+++++++++.....+ .++..++.++..|...+.+...+... +||+||+|.+..++++.++++..++|+|++
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 1368888887654321 22234455555555555554222222 499999998777777777888889999999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
.|+............ . ..........++.+++.+|.|+++|...++.+.+.++. ....+.+++||++.
T Consensus 152 ~h~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~-------~~~k~~vi~ngvd~ 219 (438)
T 3c48_A 152 AHTLAAVKNSYRDDS----D-TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDA-------DPDRISVVSPGADV 219 (438)
T ss_dssp CSSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCC-------CGGGEEECCCCCCT
T ss_pred ecCCccccccccccc----C-CcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCC-------ChhheEEecCCccc
Confidence 999754332110000 0 00000112236678999999999998877655554431 11236778899973
Q ss_pred CCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC--CccEEEEecCChhhHHHHHHHH
Q 005365 515 FDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV--ENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 515 ~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~--~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
..+.. ++++....+|+|+..+.||++.+++++..+....+ +..++++|..+.. .++.+.++
T Consensus 220 --~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~-g~~~~~l~ 296 (438)
T 3c48_A 220 --ELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGP-NATPDTYR 296 (438)
T ss_dssp --TTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHH
T ss_pred --cccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCC-CcHHHHHH
Confidence 22221 12344567899999999999999999999988765 5667777762110 13446788
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
++++++++.++|.|+| .++.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+
T Consensus 297 ~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~ 371 (438)
T 3c48_A 297 HMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGL 371 (438)
T ss_dssp HHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEE
T ss_pred HHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEE
Confidence 8999999999999999 6667899999997 9999999999999999999999999999999999999999999999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|+++++++|.+++ +|++.+.+|+++|++++.+
T Consensus 372 ~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 372 LVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHART 408 (438)
T ss_dssp EESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 7999999999999988753
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=342.81 Aligned_cols=369 Identities=16% Similarity=0.114 Sum_probs=266.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC------Cc-
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT------CG- 348 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~------~~- 348 (700)
+|||++++++++| +..||.++++. +|+++|+++||+|+ |+|+..+...... ++
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 5899999988764 25699999999 66777799999999 9997654432110 00
Q ss_pred -cceeEe-cCccceEEEEecCCCcccccccccccccchh-h-------HHHHHHHHHHHHHHHc--CCCCeEEEEcCCCc
Q 005365 349 -QRLEKV-YGTKYSDILRVPFRTEKGVVRKWISRFEVWP-Y-------LETYTEDVAVEIAKEL--QGKPDLIIGNYSDG 416 (700)
Q Consensus 349 -~~~e~i-~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~-~-------l~~f~~~~~~~l~~~~--~~~pDlIh~h~~~~ 416 (700)
...... ...+++.+++++. .. ..+..++. + +..|...+.+.+...+ ..+||+||+|.+..
T Consensus 62 ~~~~~~~~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~ 133 (439)
T 3fro_A 62 EVQVKVSYEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 133 (439)
T ss_dssp EEEEEEEEEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG
T ss_pred ccceeeeeccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh
Confidence 000000 0224688888876 21 11122222 1 1224444444444431 45899999999888
Q ss_pred hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccc
Q 005365 417 NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYES 496 (700)
Q Consensus 417 ~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~ 496 (700)
++++.++++..++|+|++.|+.....+.........+... ........++.+++.||.|+++|....+.....++
T Consensus 134 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~---- 208 (439)
T 3fro_A 134 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFR---- 208 (439)
T ss_dssp HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHG----
T ss_pred hhhHHHHhhccCCCEEEEecccccccCchHHhCccccccc-cccceeeHhhhhhhhccEEEecCHHHHHHHhhhhh----
Confidence 8888888888999999999998654322111100000000 01111134678899999999999876653211111
Q ss_pred cccccCCCeEEeecCCCCCCCcceec-------------------CCCCccccccCCch-hhhchhhHHHHHHHHhhcC-
Q 005365 497 HTAFTLPGLYRVVHGIDVFDPKFNIV-------------------SPGADMSIYFPYTE-EKRRLKSFHPEIEELLYSD- 555 (700)
Q Consensus 497 ~~~~~~p~l~~v~nGId~~~~k~~vI-------------------p~G~d~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll~~~- 555 (700)
.....+.+++||++. ..+... +++ ...+|+|+.. +.||++.+++|++.+....
T Consensus 209 ---~~~~~i~vi~ngvd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~ 282 (439)
T 3fro_A 209 ---NFEGKITYVFNGIDC--SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE 282 (439)
T ss_dssp ---GGTTSEEECCCCCCT--TTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG
T ss_pred ---hcCCceeecCCCCCc--hhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc
Confidence 123457788999983 333221 333 6678999999 9999999999999998765
Q ss_pred -CCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHH
Q 005365 556 -VENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 634 (700)
Q Consensus 556 -~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA 634 (700)
++..++++|.|+. .+.+.+++++++++ +.+.|.| .++.+++..+++. +|++|+||.+|+||++++||||
T Consensus 283 ~~~~~l~i~G~g~~---~~~~~l~~~~~~~~--~~~~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 283 FQEMRFIIIGKGDP---ELEGWARSLEEKHG--NVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp GGGEEEEEECCCCH---HHHHHHHHHHHHCT--TEEEECS----CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHH
T ss_pred CCCeEEEEEcCCCh---hHHHHHHHHHhhcC--CEEEEcC----CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHH
Confidence 6778888887754 34467888888888 7788998 6677999999997 9999999999999999999999
Q ss_pred cCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
Q 005365 635 CGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 635 ~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-dp~~~~~ms~~ar~ra~ 698 (700)
||+|||+|+.||..|++.++ +|++++++|+++++++|.+++ + |++.+++|+++|+++++
T Consensus 353 ~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll----~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 353 LGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp TTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH----HHTTTTTHHHHHHHHHHHH
T ss_pred CCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999888 999999999999999999998 6 89999999999999874
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=328.65 Aligned_cols=278 Identities=17% Similarity=0.239 Sum_probs=197.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCC------CCchhhh---h--ccccc---chhhh
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYP------DSDIYWK---N--LDDKY---HFSCQ 462 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~------~~~~~w~---~--~~~~y---~~~~~ 462 (700)
+++||+|+|.|.+++++.++.... ++|+|+|+|++...... .....+. . ....+ .....
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 357899999999999888776543 68999999987543210 0000000 0 00000 01112
Q ss_pred hhHHHHHHhhCCEEEecCHHHHHhhhhhhccc-cccccccCCCeEEeecCCCCC--CCcc--ee----------------
Q 005365 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQY-ESHTAFTLPGLYRVVHGIDVF--DPKF--NI---------------- 521 (700)
Q Consensus 463 ~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y-~~~~~~~~p~l~~v~nGId~~--~~k~--~v---------------- 521 (700)
+..++..+..||.|+|+|+..++.+...++.- +.........+..|+||||.. .+.. .+
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~ 311 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALN 311 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHH
Confidence 23466789999999999988776554433211 111112234688899999842 1110 00
Q ss_pred -----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcE
Q 005365 522 -----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQF 590 (700)
Q Consensus 522 -----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V 590 (700)
+.+.....+|+||+.++||++.+++|++.+... +.+++++|.|+.+.. ..++..... +.++|
T Consensus 312 k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~---~~~~~~~~~--~~~~v 384 (536)
T 3vue_A 312 KEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFE---KLLKSMEEK--YPGKV 384 (536)
T ss_dssp HHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHH---HHHHHHHHH--STTTE
T ss_pred HHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHH---HHHHHHHhh--cCCce
Confidence 113345678999999999999999999998754 567899999887543 344444444 45789
Q ss_pred EEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE----------EE
Q 005365 591 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY----------HI 660 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~----------lv 660 (700)
.|.+ ..+.+++..+|+. +|+||+||++|+||++++|||+||+|||+|++||++|+|.||++|| ++
T Consensus 385 ~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~ 459 (536)
T 3vue_A 385 RAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVV 459 (536)
T ss_dssp EEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCC
T ss_pred EEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEE
Confidence 9999 5566888888886 9999999999999999999999999999999999999999999999 67
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+|.|+++|+++|.++++. ..++ .|++|.++|.+
T Consensus 460 ~~~d~~~la~ai~ral~~-~~~~-~~~~~~~~am~ 492 (536)
T 3vue_A 460 EPSDVKKVAATLKRAIKV-VGTP-AYEEMVRNCMN 492 (536)
T ss_dssp CHHHHHHHHHHHHHHHHH-TTSH-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh-cCcH-HHHHHHHHHHH
Confidence 888999999999988742 2444 57888887743
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=312.56 Aligned_cols=337 Identities=15% Similarity=0.208 Sum_probs=251.1
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
++|||+++++.+. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999997754 44699999999 566666 699999 9886643210 0111
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc-EEE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT-QCT 433 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP-~V~ 433 (700)
....++.+++++...... .. .+...+.+.+.+. +||+||+|..........++++.++| +|+
T Consensus 53 ~~~~~~~~~~~~~~~~~~-------------~~-~~~~~l~~~~~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVMLP-------------TP-TTAHAMAEIIRER---EIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSCCS-------------CH-HHHHHHHHHHHHT---TCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEcccccccc-------------ch-hhHHHHHHHHHhc---CCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 123367888887653211 01 2233445555554 89999998866554455557778887 888
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+... .|.. .... ....+.+++.+|.|+++|....+.+++.++. -..+.+++||++
T Consensus 116 ~~h~~~~--------~~~~----~~~~--~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--------~~~~~vi~ngv~ 173 (394)
T 3okp_A 116 STHGHEV--------GWSM----LPGS--RQSLRKIGTEVDVLTYISQYTLRRFKSAFGS--------HPTFEHLPSGVD 173 (394)
T ss_dssp ECCSTHH--------HHTT----SHHH--HHHHHHHHHHCSEEEESCHHHHHHHHHHHCS--------SSEEEECCCCBC
T ss_pred Eeccchh--------hhhh----cchh--hHHHHHHHHhCCEEEEcCHHHHHHHHHhcCC--------CCCeEEecCCcC
Confidence 9997533 1111 0111 1124567899999999998877655554431 134677889997
Q ss_pred CCCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHH
Q 005365 514 VFDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYS 579 (700)
Q Consensus 514 ~~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~ 579 (700)
. ..+.. ++++....+|+|+..+.||++.++++++.+....++..++++|.|.. .+.+++
T Consensus 174 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----~~~l~~ 246 (394)
T 3okp_A 174 V--KRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY-----ESTLRR 246 (394)
T ss_dssp T--TTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTT-----HHHHHH
T ss_pred H--HHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchH-----HHHHHH
Confidence 3 22221 13344568899999999999999999999988878888888887633 245555
Q ss_pred HHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-------CCccHHHHHHHHcCCCEEEcCCCCcccccc
Q 005365 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-------EAFGLTVVEAMTCGLPTFATCKGGPAEIIV 652 (700)
Q Consensus 580 li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-------E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~ 652 (700)
++ .++.++|.|+| .++.+++..+|+. +|++|+||.+ |+||++++|||+||+|||+|+.||..|++.
T Consensus 247 ~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~ 319 (394)
T 3okp_A 247 LA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVT 319 (394)
T ss_dssp HT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCC
T ss_pred HH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHh
Confidence 55 56778999999 6667999999997 9999999999 999999999999999999999999999999
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 653 NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 653 dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++ +|++++++|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 320 ~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 320 PA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp TT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHH
T ss_pred cC-CceEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999998 8999999999999998865
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=323.62 Aligned_cols=380 Identities=14% Similarity=0.126 Sum_probs=249.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC----------
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT---------- 346 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~---------- 346 (700)
|||++++.+++|. +..||.++++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999876642 24699999999 66667799999999 9986532110000
Q ss_pred -CccceeEec-CccceEEEEecCCCc---cc-ccc-----cccccccchhhHHHHHHHHHHHHHHHc-CCCCeEEEEcCC
Q 005365 347 -CGQRLEKVY-GTKYSDILRVPFRTE---KG-VVR-----KWISRFEVWPYLETYTEDVAVEIAKEL-QGKPDLIIGNYS 414 (700)
Q Consensus 347 -~~~~~e~i~-~~~~v~I~rvp~~~~---~~-~~~-----~~lsr~~i~~~l~~f~~~~~~~l~~~~-~~~pDlIh~h~~ 414 (700)
.....+... ..+++.+++++.... .+ ... .|. ..+..+..+...+.+.+.... ..+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~ 138 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYT---DNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDW 138 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCT---THHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETG
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCC---chHHHHHHHHHHHHHHHHHhccCCCCCEEEeecc
Confidence 000001110 013678888764210 00 000 000 000011122222333322211 148999999987
Q ss_pred CchHHHHHHH-HhcCCcEEEEecCCccccCCC-Cch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHh
Q 005365 415 DGNIVASLLA-HKLGVTQCTIAHALEKTKYPD-SDI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 415 ~~~lva~lla-~~~giP~V~t~H~l~~~~~~~-~~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~ 486 (700)
..++++.+++ +..++|+|++.|+........ ... .+..+. ....+......++.+++.+|.|+++|...++.
T Consensus 139 ~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 218 (485)
T 2qzs_A 139 HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE 218 (485)
T ss_dssp GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH
T ss_pred chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHH
Confidence 7777777777 678999999999975321100 000 000000 00001111223667899999999999877654
Q ss_pred hhhh-hccccccccc--cC--CCeEEeecCCCCCCCccee------------------------------cCC--CCccc
Q 005365 487 SKDT-VGQYESHTAF--TL--PGLYRVVHGIDVFDPKFNI------------------------------VSP--GADMS 529 (700)
Q Consensus 487 ~k~~-~~~y~~~~~~--~~--p~l~~v~nGId~~~~k~~v------------------------------Ip~--G~d~~ 529 (700)
+.+. ++.- ....+ .. ..+.+|+||++.. .+.. +++ +....
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~~vi~ngvd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i 295 (485)
T 2qzs_A 219 ITEPQFAYG-MEGLLQQRHREGRLSGVLNGVDEK--IWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLF 295 (485)
T ss_dssp TTSHHHHTT-CHHHHHHHHHTTCEEECCCCCCTT--TSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEE
T ss_pred HhccccCcc-hHHHHHhhccCCceEEEecCCCcc--ccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEE
Confidence 4332 2200 00000 00 3477889999842 2211 111 34567
Q ss_pred cccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE-EeccccCcCChhHHHHH
Q 005365 530 IYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR-WISSQMNRVRNGELYRY 608 (700)
Q Consensus 530 ~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~-flG~~~d~v~~~el~~~ 608 (700)
+|+|++.+.||++.+++|++.+.. ++..++++|.|+. ++.+.+++++++++ ++|. |.|+ +.+++..+
T Consensus 296 ~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~-----~~~~~~~~ 363 (485)
T 2qzs_A 296 AVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP---VLQEGFLAAAAEYP--GQVGVQIGY-----HEAFSHRI 363 (485)
T ss_dssp EEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH---HHHHHHHHHHHHST--TTEEEEESC-----CHHHHHHH
T ss_pred EEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch---HHHHHHHHHHHhCC--CcEEEeCCC-----CHHHHHHH
Confidence 899999999999999999999876 3678888888754 24467778888875 6786 8883 45777899
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
|+. +|++|+||.+|+||++++||||||+|||+|+.||.+|++.++ .+|++++++|++++|++|.++++ +
T Consensus 364 ~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~-~ 441 (485)
T 2qzs_A 364 MGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV-L 441 (485)
T ss_dssp HHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHH-H
T ss_pred HHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHH-H
Confidence 996 999999999999999999999999999999999999999998 89999999999999999999872 1
Q ss_pred cCCHHHHHHHHHHHHH
Q 005365 680 KADPSYWDKISLGGLK 695 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ 695 (700)
..|++.+++|+++|++
T Consensus 442 ~~~~~~~~~~~~~~~~ 457 (485)
T 2qzs_A 442 WSRPSLWRFVQRQAMA 457 (485)
T ss_dssp HTSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 1589999999999864
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.63 Aligned_cols=329 Identities=18% Similarity=0.241 Sum_probs=235.0
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccccccc
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (700)
|..||.+.++. +|+++|+++||+|+ |+|...+.... ...+++.+..++......
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~---- 77 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYSV---- 77 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEecccccccc----
Confidence 44699999999 66667799999999 99865321100 111245666555432210
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH-HHHHHHHhc--CCcEEEEecCCccccCCCCchhhhhc
Q 005365 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI-VASLLAHKL--GVTQCTIAHALEKTKYPDSDIYWKNL 453 (700)
Q Consensus 377 ~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l-va~lla~~~--giP~V~t~H~l~~~~~~~~~~~w~~~ 453 (700)
+...++...+...+.+.+.+. +||+||+|+..... .+.+.++.. ++|+|++.|+........
T Consensus 78 ----~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 78 ----FQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ----cccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 111112223344455566665 89999999765443 344334443 599999999853321110
Q ss_pred ccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----------c
Q 005365 454 DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----------V 522 (700)
Q Consensus 454 ~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----------I 522 (700)
...+ ...++.+++.+|.|+++|....+.+.+.++. .....+++||++. ..+.. +
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------~~~~~vi~ngv~~--~~~~~~~~~~~~~~~~~ 207 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETHELVKP--------NKDIQTVYNFIDE--RVYFKRDMTQLKKEYGI 207 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHHHHTCC--------SSCEEECCCCCCT--TTCCCCCCHHHHHHTTC
T ss_pred CHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHHhhCC--------cccEEEecCCccH--HhcCCcchHHHHHHcCC
Confidence 0000 1125567899999999998877655544331 1246788899973 22221 1
Q ss_pred CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh
Q 005365 523 SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 602 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~ 602 (700)
+++....+|+|+..+.||++.+++|++.+... .+..++++|.|.. .++++++++++++.++|.|+|+.
T Consensus 208 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~-----~~~l~~~~~~~~l~~~v~~~g~~------ 275 (394)
T 2jjm_A 208 SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE-----FCTILQLVKNLHIEDRVLFLGKQ------ 275 (394)
T ss_dssp C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-----HHHHHHHHHTTTCGGGBCCCBSC------
T ss_pred CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-----HHHHHHHHHHcCCCCeEEEeCch------
Confidence 13445678999999999999999999998876 4567778776632 35688889999999999999942
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|
T Consensus 276 ~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~ 350 (394)
T 2jjm_A 276 DNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KD 350 (394)
T ss_dssp SCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HC
T ss_pred hhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cC
Confidence 467888886 9999999999999999999999999999999999999999999999999999999999999998 79
Q ss_pred HHHHHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLKRIE 698 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~ 698 (700)
++.+++|+++|++++.
T Consensus 351 ~~~~~~~~~~~~~~~~ 366 (394)
T 2jjm_A 351 EELHRNMGERARESVY 366 (394)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999884
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=320.33 Aligned_cols=382 Identities=13% Similarity=0.139 Sum_probs=248.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCC--C--------
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT--T-------- 346 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~--~-------- 346 (700)
|||++++.+++|. +..||.+.++. +|+++|+++||+|+ |+|...+..... .
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAAVTDPVKCFEFT 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHHCCSCEEEEEES
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccccccccceeEEEE
Confidence 7999999877642 24699999999 66777799999999 998653221000 0
Q ss_pred --CccceeEe-cCccceEEEEecCCCccccccc--cccc--ccchh----hHHHHHHHHHHHHHHH-cCCCCeEEEEcCC
Q 005365 347 --CGQRLEKV-YGTKYSDILRVPFRTEKGVVRK--WISR--FEVWP----YLETYTEDVAVEIAKE-LQGKPDLIIGNYS 414 (700)
Q Consensus 347 --~~~~~e~i-~~~~~v~I~rvp~~~~~~~~~~--~lsr--~~i~~----~l~~f~~~~~~~l~~~-~~~~pDlIh~h~~ 414 (700)
.....+.. ...+++.+++++...... +. .... ..-|+ .+..|...+.+.+... ...+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~~gv~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~ 139 (485)
T 1rzu_A 62 DLLGEKADLLEVQHERLDLLILDAPAYYE--RSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDW 139 (485)
T ss_dssp CSSSCCEEEEEEEETTEEEEEEECHHHHC--SSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHH
T ss_pred EecCCeEEEEEEEecCceEEEEeChHHhC--CCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEeccc
Confidence 00000110 011367888876431100 00 0000 00010 1112222233333211 1458999999987
Q ss_pred CchHHHHHHHHh--cCCcEEEEecCCccccC-CCCch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 415 DGNIVASLLAHK--LGVTQCTIAHALEKTKY-PDSDI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 415 ~~~lva~lla~~--~giP~V~t~H~l~~~~~-~~~~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
..++++.++++. .++|+|++.|+...... ..... .+..+. ....+......++.+++.||.|+++|...++
T Consensus 140 ~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 219 (485)
T 1rzu_A 140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAE 219 (485)
T ss_dssp HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHH
T ss_pred chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHH
Confidence 666667767665 89999999999753221 00000 000000 0000101112366789999999999987766
Q ss_pred hhhhh-hccc-cccccccCCCeEEeecCCCCCCCccee------------------------------cCCC-Ccccccc
Q 005365 486 GSKDT-VGQY-ESHTAFTLPGLYRVVHGIDVFDPKFNI------------------------------VSPG-ADMSIYF 532 (700)
Q Consensus 486 ~~k~~-~~~y-~~~~~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip~G-~d~~~F~ 532 (700)
.+.+. ++.- ..........+.+|+||++. ..+.. +++. ....+|+
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~v 297 (485)
T 1rzu_A 220 EILTAEFGMGLEGVIGSRAHVLHGIVNGIDA--DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVI 297 (485)
T ss_dssp HTTSHHHHTTCHHHHHTTGGGEEECCCCBCT--TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEE
T ss_pred HHhccccCcchHHHHHhhcCCceEEcCCCcc--cccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEE
Confidence 54432 1100 00000011347788999984 22211 1111 3367899
Q ss_pred CCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE-EeccccCcCChhHHHHHHHc
Q 005365 533 PYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR-WISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 533 g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~-flG~~~d~v~~~el~~~la~ 611 (700)
|++.+.||++.+++|+..+.. ++..++++|.|+. .+.+.+++++++++ ++|. |.|+ +.+++..+|+.
T Consensus 298 Grl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~-----~~~~~~~~~~~ 365 (485)
T 1rzu_A 298 SRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV---ALEGALLAAASRHH--GRVGVAIGY-----NEPLSHLMQAG 365 (485)
T ss_dssp SCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH---HHHHHHHHHHHHTT--TTEEEEESC-----CHHHHHHHHHH
T ss_pred ccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch---HHHHHHHHHHHhCC--CcEEEecCC-----CHHHHHHHHhc
Confidence 999999999999999999876 3678888888754 23467778888775 6787 7873 45677899996
Q ss_pred cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+|++|+||.+|+||++++||||||+|||+|+.||++|++.++ .+|++++++|++++|++|.++++ ...|
T Consensus 366 -adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~-~~~~ 443 (485)
T 1rzu_A 366 -CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVR-YYHD 443 (485)
T ss_dssp -CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHH-HHTC
T ss_pred -CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHH-HhCC
Confidence 999999999999999999999999999999999999999998 89999999999999999999872 1159
Q ss_pred HHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLK 695 (700)
Q Consensus 683 p~~~~~ms~~ar~ 695 (700)
++.+++|+++|++
T Consensus 444 ~~~~~~~~~~~~~ 456 (485)
T 1rzu_A 444 PKLWTQMQKLGMK 456 (485)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999863
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=312.83 Aligned_cols=335 Identities=14% Similarity=0.175 Sum_probs=235.1
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++++++.| .||.++++. +++++|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~~----------~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecCC----------CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 799999976542 489999999 66667799999999 9986532210
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
.+++.++++|...... ......+...+.+.+.+. +||+||+|....+..+...++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKEH---PADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHHS---CCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhcc---CCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1257788887654311 111222333444455544 89999998754332111111111222222233
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHh--hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN--HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~--~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
+... .....+.... ..++..+. .+|.|+++|...++.+.+.++. ......+++||++.
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------~~~~~~vi~ngv~~ 171 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQKHYQT-------EPERFQILPPGIYP 171 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHHHHCC-------CGGGEEECCCCCCG
T ss_pred cchh-----------hhcHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHHHHHHHhCC-------ChhheEEecCCcCH
Confidence 2110 0011111111 12444454 6999999998877655554431 11246778889873
Q ss_pred CCCcceec---------------CCCCccccccCCchhhhchhhHHHHHHHHhhc-CCCccEEEEecCChhhHHHHHHHH
Q 005365 515 FDPKFNIV---------------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYS-DVENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 515 ~~~k~~vI---------------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
..+... +++....+|.|+..+.||++.+++++..+... .++..++++|.|+. +.++
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~------~~~~ 243 (374)
T 2iw1_A 172 --DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP------RKFE 243 (374)
T ss_dssp --GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC------HHHH
T ss_pred --HhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH------HHHH
Confidence 222211 23445678999999999999999999988655 35677888887642 4577
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
++++++++.++|+|+|++ +++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+
T Consensus 244 ~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~ 316 (374)
T 2iw1_A 244 ALAEKLGVRSNVHFFSGR------NDVSELMAA-ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGT 316 (374)
T ss_dssp HHHHHHTCGGGEEEESCC------SCHHHHHHH-CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEE
T ss_pred HHHHHcCCCCcEEECCCc------ccHHHHHHh-cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceE
Confidence 888899999999999942 468888886 9999999999999999999999999999999999999999999999
Q ss_pred EEC-CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HID-PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~-p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++ |+|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 317 ~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 317 VIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYADT 354 (374)
T ss_dssp EECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHH
Confidence 998 899999999999998 7999999999999998875
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=306.52 Aligned_cols=340 Identities=13% Similarity=0.175 Sum_probs=242.1
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
.++|||+++++... +..||.+.++. .++++|+++||+|+ |+|......... ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 45699999995432 33589999999 66667799999999 988764332111 1111
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
.. + +++++|.... ..+... ...+...+.+.+.+. +||+||+|.......+..+++..++|+|+
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~~~~---~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VARLRF---GPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC-------------------C---CHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------cccccc---cHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3444443221 001111 111223445555555 89999998866655577777888999999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+..... ..+..+ +. .+ + ..++.+|.|+++|....+.+.+.++ .+.. +++||++
T Consensus 136 ~~h~~~~~~-----~~~~~~---~~---~~--~-~~~~~~d~ii~~s~~~~~~~~~~~~---------~~~~-vi~~~v~ 191 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSVF---QG---IL--R-PYHEKIIGRIAVSDLARRWQMEALG---------SDAV-EIPNGVD 191 (406)
T ss_dssp EECCCCCSH-----HHHHHH---HS---TT--H-HHHTTCSEEEESSHHHHHHHHHHHS---------SCEE-ECCCCBC
T ss_pred EEcCcchhh-----hhHHHH---HH---HH--H-HHHhhCCEEEECCHHHHHHHHHhcC---------CCcE-EecCCCC
Confidence 999853221 111111 11 11 2 5689999999999877665544332 2345 7788887
Q ss_pred CCCCcce------ecCCCCccccccCCc-hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 514 VFDPKFN------IVSPGADMSIYFPYT-EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 514 ~~~~k~~------vIp~G~d~~~F~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
. ..+. -.+.+....+|+|+. .+.||++.+++++..+....++..++++|.|+. +.++++++++
T Consensus 192 ~--~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~------~~l~~~~~~~-- 261 (406)
T 2gek_A 192 V--ASFADAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE------DELREQAGDL-- 261 (406)
T ss_dssp H--HHHHTCCCCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH------HHHHHHTGGG--
T ss_pred h--hhcCCCchhhhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH------HHHHHHHHhc--
Confidence 3 1111 112233567899999 999999999999999988777888888887743 4566666665
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
.++|.|+| .+++.++..+|+. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 262 ~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~ 336 (406)
T 2gek_A 262 AGHLRFLG----QVDDATKASAMRS-ADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDA 336 (406)
T ss_dssp GGGEEECC----SCCHHHHHHHHHH-SSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCH
T ss_pred cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCH
Confidence 67899999 6667899999997 999999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ +|++.+.+|+++|++++.
T Consensus 337 ~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 337 DGMAAALIGIL----EDDQLRAGYVARASERVH 365 (406)
T ss_dssp HHHHHHHHHHH----HCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHH
Confidence 99999999998 799999999999998875
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=302.51 Aligned_cols=256 Identities=14% Similarity=0.140 Sum_probs=195.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEE-ecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII-TSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~II-t~S~~~ 483 (700)
+||+||+|.+.....+.++++ ++|+|++.|+..... ....|. + ....+..+|.++ ++|...
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~---~~~~~~-------~------~~~~~~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK--KSPWLWRCHIDLSSP---NREFWE-------F------LRRFVEKYDRYIFHLPEYV 187 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC--CSCEEEECCSCCSSC---CHHHHH-------H------HHHHHTTSSEEEESSGGGS
T ss_pred CCCEEEEeccchhhHHHHHHh--cCCEEEEEccccCCc---cHHHHH-------H------HHHHHHhCCEEEEechHHH
Confidence 899999998665544433332 389999999864321 111111 1 123466778776 455221
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--------------ecCCCCccccccCCchhhhchhhHHHHHH
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--------------IVSPGADMSIYFPYTEEKRRLKSFHPEIE 549 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--------------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~ 549 (700)
++.+ .-....+++||++....... -++++....+|.|++.+.||++.+++|+.
T Consensus 188 ----~~~~---------~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~ 254 (416)
T 2x6q_A 188 ----QPEL---------DRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYR 254 (416)
T ss_dssp ----CTTS---------CTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHH
T ss_pred ----HhhC---------CccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHH
Confidence 1111 11346788999984221100 01344556789999999999999999999
Q ss_pred HHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 550 ELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 550 ~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
.+....++..++++|.|........+.++++++++++.++|+|+|+.+ .++.+++..+++. +|++|+||.+|+||+++
T Consensus 255 ~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~E~~~~~~ 332 (416)
T 2x6q_A 255 KVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRA-SDVILQMSIREGFGLTV 332 (416)
T ss_dssp HHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGG-TCCHHHHHHHHHH-CSEEEECCSSCSSCHHH
T ss_pred HHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccC-CCCHHHHHHHHHh-CCEEEECCCcCCCccHH
Confidence 998888888999999885422234467788899999999999999665 3456799999997 99999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+||||||+|||+|+.||.+|++.++.+|++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 333 lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 396 (416)
T 2x6q_A 333 TEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLL----KHPEVSKEMGAKAKERVRK 396 (416)
T ss_dssp HHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 9999999999998 7999999999999998864
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.6e-32 Score=295.45 Aligned_cols=335 Identities=12% Similarity=0.096 Sum_probs=236.1
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|...... ..+. .
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~g~--~~~~-~------ 48 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAFGR--SVHA-N------ 48 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCCSC--CSCS-S------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCCCc--cccc-c------
Confidence 8999999753 33599999999 677777999 9999 887543210 0000 0
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc----EE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT----QC 432 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP----~V 432 (700)
.......... .++ +++... +.+ ..+.+.+.+. +||+||+|++ ....+..+++..++| .+
T Consensus 49 ---~~~~~~~~~~---~~~-~~~~~~-~~~-----~~l~~~l~~~---~~Div~~~~~-~~~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 49 ---IEEFDAQTAE---HVR-GLNEQG-FYY-----SGLSEFIDVH---KPDIVMIYND-PIVIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp ---SEEEEHHHHH---HHT-TCCSTT-CCH-----HHHHHHHHHH---CCSEEEEEEC-HHHHHHHHHHGGGCCSCCEEE
T ss_pred ---cccCCccccc---ccc-cccccc-chH-----HHHHHHHHhc---CCCEEEEcch-HHHHHHHHHHhccCCCCCcee
Confidence 0100000000 000 011000 001 1234445555 8999999944 445566666666655 34
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC--EEEecCHHHHHhhhhhhccccccccccCCCeEEeec
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD--FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH 510 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD--~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n 510 (700)
...|...... ... . +..++.+| .|+++|....+.+.+ ++ . -....+++|
T Consensus 112 ~~~~~~~~~~--------~~~------~------~~~~~~~~~~~ii~~S~~~~~~~~~-~~-------~-~~~~~vi~n 162 (413)
T 3oy2_A 112 LYVDLVSKNI--------REN------L------WWIFSHPKVVGVMAMSKCWISDICN-YG-------C-KVPINIVSH 162 (413)
T ss_dssp EEECCCSBSC--------CGG------G------GGGGGCTTEEEEEESSTHHHHHHHH-TT-------C-CSCEEECCC
T ss_pred eeccccchhh--------HHH------H------HHHHhccCCceEEEcCHHHHHHHHH-cC-------C-CCceEEeCC
Confidence 4455332111 000 1 13477888 999999777655444 22 1 134778889
Q ss_pred CCCCCCC-cce---ecCC--CCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhH-HHHHHHHHHHHH
Q 005365 511 GIDVFDP-KFN---IVSP--GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQ-AEMKKMYSLIDQ 583 (700)
Q Consensus 511 GId~~~~-k~~---vIp~--G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~-~~~~~l~~li~~ 583 (700)
|++.... ... -+++ .....+|+|+..+.||++.+++|+..+....++..++++|.|..+.. ...+.+++++++
T Consensus 163 gvd~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~ 242 (413)
T 3oy2_A 163 FVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVA 242 (413)
T ss_dssp CCCCCCCTTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHH
Confidence 9984211 110 0122 34567899999999999999999999988888999999998864321 123577888999
Q ss_pred cCCCCc-------EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCe
Q 005365 584 YKLNGQ-------FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS 656 (700)
Q Consensus 584 l~L~~~-------V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~ 656 (700)
+++.++ |.|.| .++.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||.+|++.++.+
T Consensus 243 ~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~ 317 (413)
T 3oy2_A 243 SGVDNVFTHLNKIMINRT----VLTDERVDMMYNA-CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCV 317 (413)
T ss_dssp HTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTS
T ss_pred cCcccccccccceeeccC----cCCHHHHHHHHHh-CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcc
Confidence 999987 88888 6677999999997 99999999999999999999999999999999999999999887
Q ss_pred ---------------EE--EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 657 ---------------GY--HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 657 ---------------G~--lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+ +++++|+++++++| +++ +|++.+++|+++|++++.+
T Consensus 318 ~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~----~~~~~~~~~~~~a~~~~~~ 372 (413)
T 3oy2_A 318 YKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF----KDEKNRKEYGKRVQDFVKT 372 (413)
T ss_dssp EEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT----TSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccCcceeeCCCCHHHHHHHH-HHh----cCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999 998 8999999999999999864
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-32 Score=287.50 Aligned_cols=281 Identities=12% Similarity=0.059 Sum_probs=208.2
Q ss_pred ceEEEEEccc--------cccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCC
Q 005365 276 VFNVVILTPH--------GYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC 347 (700)
Q Consensus 276 ~mkI~iis~h--------~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~ 347 (700)
+|||++++++ .+|.+. ...||.+.++. +++++|+++||+|+ |+|.......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-----~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~---- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-----QGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG---- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-----SSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC----
T ss_pred ccEEEEEeccccccCcccccccCc-----ccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC----
Confidence 3899999987 332110 13599999999 66667799999999 9886533211
Q ss_pred ccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc
Q 005365 348 GQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL 427 (700)
Q Consensus 348 ~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~ 427 (700)
.+++.+++. .. +. .+.+.+.+. +||+||+|.......+ ++..
T Consensus 62 ---------~~~~~~~~~--~~--------------~~-------~l~~~l~~~---~~Dvi~~~~~~~~~~~---~~~~ 103 (342)
T 2iuy_A 62 ---------RPGLTVVPA--GE--------------PE-------EIERWLRTA---DVDVVHDHSGGVIGPA---GLPP 103 (342)
T ss_dssp ---------STTEEECSC--CS--------------HH-------HHHHHHHHC---CCSEEEECSSSSSCST---TCCT
T ss_pred ---------CCcceeccC--Cc--------------HH-------HHHHHHHhc---CCCEEEECCchhhHHH---Hhhc
Confidence 013333221 10 00 234444443 8999999886654332 5667
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEE
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYR 507 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~ 507 (700)
++| |++.|+...... .+|.|+++|...++.+.+ .....+
T Consensus 104 ~~p-v~~~h~~~~~~~----------------------------~~d~ii~~S~~~~~~~~~------------~~~~~v 142 (342)
T 2iuy_A 104 GTA-FISSHHFTTRPV----------------------------NPVGCTYSSRAQRAHCGG------------GDDAPV 142 (342)
T ss_dssp TCE-EEEEECSSSBCS----------------------------CCTTEEESCHHHHHHTTC------------CTTSCB
T ss_pred CCC-EEEecCCCCCcc----------------------------cceEEEEcCHHHHHHHhc------------CCceEE
Confidence 899 999998743210 189999999776553322 134567
Q ss_pred eecCCCCCCCcceecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 508 VVHGIDVFDPKFNIVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 508 v~nGId~~~~k~~vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
++||++. ..+...+ +.....+|+|++.+.||++.++++++.+ +..++++|.|+. . +.++++++++
T Consensus 143 i~ngvd~--~~~~~~~~~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~--~---~~l~~~~~~~ 210 (342)
T 2iuy_A 143 IPIPVDP--ARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWE--P---EYFDEITRRY 210 (342)
T ss_dssp CCCCBCG--GGSCCSTTCCCCCSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCC--H---HHHHHHHHHH
T ss_pred EcCCCCh--hhcCcccccCCCCCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCccc--H---HHHHHHHHHh
Confidence 8889873 2222211 2345688999999999999999999887 577888887742 2 4556677777
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC----------CCCccHHHHHHHHcCCCEEEcCCCCccccccc-
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL----------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN- 653 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~----------~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d- 653 (700)
+ ++|+|+| .+++.++..+|+. +|++|+||. .|+||++++|||+||+|||+|+.||..|++++
T Consensus 211 ~--~~v~~~g----~~~~~~l~~~~~~-adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~ 283 (342)
T 2iuy_A 211 G--STVEPIG----EVGGERRLDLLAS-AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV 283 (342)
T ss_dssp T--TTEEECC----CCCHHHHHHHHHH-CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGG
T ss_pred C--CCEEEec----cCCHHHHHHHHHh-CCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhccc
Confidence 6 7899999 6667899999997 999999999 89999999999999999999999999999999
Q ss_pred -CCeEEEECCCCHHHHHHHHHHHH
Q 005365 654 -GKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 654 -g~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+.+|+++++ |+++++++|.+++
T Consensus 284 ~~~~g~~~~~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 284 GEVVGYGTDF-APDEARRTLAGLP 306 (342)
T ss_dssp EEECCSSSCC-CHHHHHHHHHTSC
T ss_pred CCCceEEcCC-CHHHHHHHHHHHH
Confidence 999999999 9999999999886
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=274.13 Aligned_cols=327 Identities=11% Similarity=0.030 Sum_probs=207.0
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
+..|||+++++++.|+ ...||.. .+. +|+++|+++||+|+ |+|+..... ......
T Consensus 44 ~~~mrI~~v~~~~~p~-------~~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-----~~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQE-------HMFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-----PKDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGG-------GCSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-----HHHHGG
T ss_pred CCCceEEEEeCCCCcc-------ccccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-----hHHHHh
Confidence 4469999999987753 1246664 467 67778899999999 999763210 000000
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH----h---
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH----K--- 426 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~----~--- 426 (700)
+ ...... +......+.. .+..+... ....+ . ..+||+||++.+.+...+..+.+ .
T Consensus 99 ~---~~~~~~--~~~~~~~~~~------~i~~~~~~----~~~~~-~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 F---KSFKYV--MPEEDKDFAL------QIVPFNDR----YNRTI-P--VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp G---TTSEEC--CTTCCCCCSE------EEEECSCC----TTCCE-E--ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred h---hcccee--eccCCccccc------eeeecccc----ccccc-c--CCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 1 011111 1111100000 00000000 00000 0 12699999988666555544421 1
Q ss_pred cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC--EEEecCHHHHHhhhhhhccccccccccCCC
Q 005365 427 LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD--FIITSTFQEIAGSKDTVGQYESHTAFTLPG 504 (700)
Q Consensus 427 ~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD--~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~ 504 (700)
.+.|.++.+|+.+...+.... . ...++..++.++ .+|++|...++.+++. + +..+.
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------~------~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~-g-------~~~~~ 218 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------Q------YVLAESTYKYRGPQIAVFNSELLKQYFNNK-G-------YNFTD 218 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------H------HHHHHHTTSCCSCEEEEEESHHHHHHHHHH-T-------CCCSE
T ss_pred ccCcEEEEEeechhhcCccCh--------H------HHHHHHHhccCCceEEEEcCHHHHHHHHHc-C-------CCCCc
Confidence 245778778876543221110 0 011234456555 5889997776554432 1 12234
Q ss_pred eEEeecCCCCC--CCcceecCCCCccccccCCc-hhhhchhhHHHHHHHHhhcCCC---ccEEEEecCChhhHHHHHHHH
Q 005365 505 LYRVVHGIDVF--DPKFNIVSPGADMSIYFPYT-EEKRRLKSFHPEIEELLYSDVE---NKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 505 l~~v~nGId~~--~~k~~vIp~G~d~~~F~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~---~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
...++||++.. ..+. ...+.....+|.|+. .+.||++.+++|++.+....++ ..++++|.|...
T Consensus 219 ~~~i~~g~d~~~~~~~~-~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~--------- 288 (413)
T 2x0d_A 219 EYFFQPKINTTLKNYIN-DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD--------- 288 (413)
T ss_dssp EEEECCCCCHHHHTTTT-SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC---------
T ss_pred eEEeCCCcCchhhcccc-cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh---------
Confidence 66778888621 1110 112233456788886 6889999999999999876664 567777765431
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
.++++.++|+|+| .++.+++..+|+. ||+||+||.+|+||++++||||||+|||++ .||..|++.+|.+|+
T Consensus 289 ---~~l~~~~~v~f~G----~~~~~~l~~~~~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~ 359 (413)
T 2x0d_A 289 ---IALGKGIHLNSLG----KLTLEDYADLLKR-SSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIV 359 (413)
T ss_dssp ---EEEETTEEEEEEE----SCCHHHHHHHHHH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEE
T ss_pred ---hhcCCcCcEEEcC----CCCHHHHHHHHHh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEE
Confidence 2467778999999 6667999999997 999999999999999999999999999995 466789999999999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+++|+|++++|++|.+++ +|++.+++
T Consensus 360 lv~~~d~~~la~ai~~ll----~~~~~~~~ 385 (413)
T 2x0d_A 360 SLEQLNPENIAETLVELC----MSFNNRDV 385 (413)
T ss_dssp EESSCSHHHHHHHHHHHH----HHTC----
T ss_pred EeCCCCHHHHHHHHHHHH----cCHHHHHH
Confidence 999999999999999998 67777666
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=242.23 Aligned_cols=312 Identities=12% Similarity=0.036 Sum_probs=208.5
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|.|||++++. + +||.+..+. .|+++|+++||+|+ ++|...+.. . +.+
T Consensus 5 m~mkIl~~~~-~------------~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~ 51 (364)
T 1f0k_A 5 QGKRLMVMAG-G------------TGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLV 51 (364)
T ss_dssp --CEEEEECC-S------------SHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHG
T ss_pred CCcEEEEEeC-C------------CccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhc
Confidence 4489999972 1 378888887 67777799999999 988643210 0 001
Q ss_pred cCccceEEEEecCCCccc--ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 355 YGTKYSDILRVPFRTEKG--VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~--~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
. ..++.+++++.....+ .... + ...+. .......+.+.+.+. +||+||+|....+..+..+++..++|+|
T Consensus 52 ~-~~g~~~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 52 P-KHGIEIDFIRISGLRGKGIKAL-I--AAPLR-IFNAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVV 123 (364)
T ss_dssp G-GGTCEEEECCCCCCTTCCHHHH-H--TCHHH-HHHHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEE
T ss_pred c-ccCCceEEecCCccCcCccHHH-H--HHHHH-HHHHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEE
Confidence 1 1256677666543211 0000 0 00111 111233445555555 8999999886666667778888999999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+.... + .++...+.+|.+++++... .|....++||+
T Consensus 124 ~~~~~~~~~--------~--------------~~~~~~~~~d~v~~~~~~~------------------~~~~~~i~n~v 163 (364)
T 1f0k_A 124 LHEQNGIAG--------L--------------TNKWLAKIATKVMQAFPGA------------------FPNAEVVGNPV 163 (364)
T ss_dssp EEECSSSCC--------H--------------HHHHHTTTCSEEEESSTTS------------------SSSCEECCCCC
T ss_pred EEecCCCCc--------H--------------HHHHHHHhCCEEEecChhh------------------cCCceEeCCcc
Confidence 999975210 0 0234567799999987321 12455677887
Q ss_pred CCCCCccee--------cCCCCcccc-ccCCchhhhchhhHHHHHHHHhhcCCCcc-EEEEecCChhhHHHHHHHHHHHH
Q 005365 513 DVFDPKFNI--------VSPGADMSI-YFPYTEEKRRLKSFHPEIEELLYSDVENK-EHLKESKDLEEQAEMKKMYSLID 582 (700)
Q Consensus 513 d~~~~k~~v--------Ip~G~d~~~-F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~-l~i~g~Gd~ee~~~~~~l~~li~ 582 (700)
+. ..+.. ++++....+ +.|+..+.|+.+.++++++.+.. +.. ++++|.|+ . +++.++++
T Consensus 164 ~~--~~~~~~~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~--~----~~l~~~~~ 232 (364)
T 1f0k_A 164 RT--DVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGS--Q----QSVEQAYA 232 (364)
T ss_dssp CH--HHHTSCCHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTC--H----HHHHHHHH
T ss_pred ch--hhcccchhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCch--H----HHHHHHHh
Confidence 62 11100 122222233 45688889999999999998854 344 33444443 1 46777888
Q ss_pred HcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcc--------cccccC
Q 005365 583 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA--------EIIVNG 654 (700)
Q Consensus 583 ~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~--------EiI~dg 654 (700)
+++++ +|+|+|++ +++..+|+. +|++|+||. |++++|||+||+|||+|+.+|.. +++++|
T Consensus 233 ~~~~~-~v~~~g~~------~~~~~~~~~-ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g 300 (364)
T 1f0k_A 233 EAGQP-QHKVTEFI------DDMAAAYAW-ADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG 300 (364)
T ss_dssp HTTCT-TSEEESCC------SCHHHHHHH-CSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT
T ss_pred hcCCC-ceEEecch------hhHHHHHHh-CCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC
Confidence 88875 69999955 457888886 999999983 99999999999999999999864 466666
Q ss_pred CeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 655 KSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 655 ~~G~lv~p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
.|++++++| +++++++|.++ |++.+++|+++|++++
T Consensus 301 -~g~~~~~~d~~~~~la~~i~~l------~~~~~~~~~~~~~~~~ 338 (364)
T 1f0k_A 301 -AAKIIEQPQLSVDAVANTLAGW------SRETLLTMAERARAAS 338 (364)
T ss_dssp -SEEECCGGGCCHHHHHHHHHTC------CHHHHHHHHHHHHHTC
T ss_pred -cEEEeccccCCHHHHHHHHHhc------CHHHHHHHHHHHHHhh
Confidence 499999988 99999998653 8999999999998764
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=256.07 Aligned_cols=216 Identities=11% Similarity=0.015 Sum_probs=158.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
++|+||.+...... ...+++..++|++++.|+..... .+. ..... ...++.+++.||.|+++|...+
T Consensus 124 ~~DvIh~~~~~~~~-~~~~~~~~~~p~v~~~h~~~~~~------~~~----~~~~~--~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVA-FIELAKRVNPAAKLVYRASDGLS------TIN----VASYI--EREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGG-GHHHHHHHCTTSEEEEEESSCHH------HHT----CCHHH--HHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHH-HHHHHHHhCCCEEEEEeccchhh------ccc----ccHHH--HHHHHHHHHhCCEEEEcCHHHH
Confidence 58999954332222 12456778999999999753211 000 01111 1236678999999999995543
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceec---CC-CCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV---SP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI---p~-G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
+.+..+. .+.+++||+|. ..+... +. +....+|+|++.+.||+ ++.+....++..+
T Consensus 191 ----~~~~~~~--------~i~vipngvd~--~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l 250 (406)
T 2hy7_A 191 ----AEVVSRD--------NVFHVGHGVDH--NLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTF 250 (406)
T ss_dssp ----GGCSCST--------TEEECCCCBCT--THHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEE
T ss_pred ----HHHHhcC--------CEEEEcCCcCh--HhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhCCCeEE
Confidence 3333221 57788999983 333211 11 22467899999999998 3444444567788
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHH-------
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM------- 633 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAM------- 633 (700)
+++|.|+ ++++++.++|+|+| .++.+++..+|+. +|++|+||..|+||++++|||
T Consensus 251 ~ivG~g~-------------~~~~~l~~~V~f~G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYl 312 (406)
T 2hy7_A 251 HVIGSGM-------------GRHPGYGDNVIVYG----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYD 312 (406)
T ss_dssp EEESCSS-------------CCCTTCCTTEEEEC----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHH
T ss_pred EEEeCch-------------HHhcCCCCCEEEcC----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHh
Confidence 8887663 45678889999999 6667899999997 999999999999999999999
Q ss_pred HcCCCEEEcCCCCcccccccCCeEEE-ECCCCHHHHHHHHHHHHH
Q 005365 634 TCGLPTFATCKGGPAEIIVNGKSGYH-IDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 634 A~GlPVVAT~~GG~~EiI~dg~~G~l-v~p~D~eaLAeaI~~ll~ 677 (700)
|||+|||+|+. +.++.+|++ ++++|++++|++|.++++
T Consensus 313 a~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 313 FFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALE 351 (406)
T ss_dssp HHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHH
T ss_pred hCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHh
Confidence 99999999988 677889999 999999999999999983
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-24 Score=227.80 Aligned_cols=259 Identities=12% Similarity=0.100 Sum_probs=173.8
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ..++.+.++++..++|++++.|+..... .|.. +..+ ...+...
T Consensus 85 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~------~~~~------~~~~-~~~~~~~ 148 (375)
T 3beo_A 85 EGLDKVMKEA---KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTWD------KYSP------YPEE-MNRQLTG 148 (375)
T ss_dssp HHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCCSC------TTSS------TTHH-HHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCC------ChhH-hhhhHHh
Confidence 3455556665 8999999865 3455666778889999998877652100 1100 0000 1122334
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC-CCCCC------Cc--ce-ecCCCCccccccCCchhh-h
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG-IDVFD------PK--FN-IVSPGADMSIYFPYTEEK-R 539 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG-Id~~~------~k--~~-vIp~G~d~~~F~g~~~~~-K 539 (700)
+.+|.++++|....+.+.+. + +....+.+++|| +|... .+ +. -.++..-..++.|+..+. |
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~-g-------~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K 220 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKE-N-------KDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGE 220 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHT-T-------CCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTH
T ss_pred hhhheeeCCCHHHHHHHHHc-C-------CCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchh
Confidence 55999999997776544321 1 111235667777 54210 00 00 001111134577888775 9
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
|++.+++|+..+....++..+++ +.|. +....+.+++++ +..++|+|+| .+...++..+|+. +|++|+|
T Consensus 221 ~~~~li~a~~~l~~~~~~~~~i~-~~g~--~~~~~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~ 289 (375)
T 3beo_A 221 PMRNMFRAIKRLVDKHEDVQVVY-PVHM--NPVVRETANDIL---GDYGRIHLIE----PLDVIDFHNVAAR-SYLMLTD 289 (375)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEE-ECCS--CHHHHHHHHHHH---TTCTTEEEEC----CCCHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEE-eCCC--CHHHHHHHHHHh---hccCCEEEeC----CCCHHHHHHHHHh-CcEEEEC
Confidence 99999999999887666665443 4332 212223333332 3346899998 5556789999997 9999999
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
| |.+++|||+||+|||+|+ .||.+|++++| +|+++++ |+++++++|.+++ +|++.+++|+++|+++
T Consensus 290 s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll----~~~~~~~~~~~~~~~~ 356 (375)
T 3beo_A 290 S-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFSLADELL----SDKEAHDKMSKASNPY 356 (375)
T ss_dssp C-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHCCCCCTT
T ss_pred C-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHHHHHHHH----hChHhHhhhhhcCCCC
Confidence 8 778999999999999996 59999999988 9999987 9999999999998 7999999998877544
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-23 Score=235.33 Aligned_cols=145 Identities=10% Similarity=0.071 Sum_probs=129.7
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~ 606 (700)
..+|.|+..+ ||++.+++++..+....++..++++|. +++ ..+.++++++++|+. ++|+|+| .++.+++.
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~-~g~---~~~~l~~~~~~~~l~~~~v~~~g----~~~~~~~~ 448 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSG-PGE---ADARLRAFAHAQGVDAQRLVFMP----KLPHPQYL 448 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECC-STT---HHHHHHHHHHHTTCCGGGEEEEC----CCCHHHHH
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecC-CHH---HHHHHHHHHHHcCCChhHEEeeC----CCCHHHHH
Confidence 4568899999 999999999999988888888888873 332 346788899999998 9999999 55668999
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE-------cCCC-------CcccccccCCeEEEECCCCHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA-------TCKG-------GPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA-------T~~G-------G~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.+|+. +|+||+||.+ +||++++|||+||+|||+ |+.| |..|+|.+ |+++++++|
T Consensus 449 ~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~~~la~~i 516 (568)
T 2vsy_A 449 ARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------DDAAFVAKA 516 (568)
T ss_dssp HHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SHHHHHHHH
T ss_pred HHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------CHHHHHHHH
Confidence 99997 9999999999 999999999999999999 9999 99999865 899999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 673 VDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 673 ~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
..++ +|++.+++|++++++++
T Consensus 517 ~~l~----~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 517 VALA----SDPAALTALHARVDVLR 537 (568)
T ss_dssp HHHH----HCHHHHHHHHHHHHHHH
T ss_pred HHHh----cCHHHHHHHHHHHHHhh
Confidence 9998 79999999999999987
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=224.56 Aligned_cols=259 Identities=10% Similarity=0.074 Sum_probs=175.5
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ...+.+.++++..++|++++.|+..... .|... ... .......
T Consensus 76 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~------~~~-~~~~~~~ 139 (384)
T 1vgv_A 76 EGLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPW------PEE-ANRTLTG 139 (384)
T ss_dssp HHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSST------THH-HHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCC------chH-hhHHHHH
Confidence 4455566665 8999999875 5556667778888999999988763211 11100 000 0111234
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC--Cc-----------cee----cCCCCc-cccc
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD--PK-----------FNI----VSPGAD-MSIY 531 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~--~k-----------~~v----Ip~G~d-~~~F 531 (700)
+.+|.++++|....+.+.+ .+ +....+.+++||+ +... .. +.- ++++.. ..+|
T Consensus 140 ~~~d~ii~~s~~~~~~l~~-~g-------~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~ 211 (384)
T 1vgv_A 140 HLAMYHFSPTETSRQNLLR-EN-------VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT 211 (384)
T ss_dssp TTCSEEEESSHHHHHHHHH-TT-------CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEE
T ss_pred hhccEEEcCcHHHHHHHHH-cC-------CChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEE
Confidence 5699999999776654332 11 1112355666763 2100 00 000 112222 3457
Q ss_pred cCCchhh-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 532 FPYTEEK-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 532 ~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
.|+..+. ||+..+++|+..+....++..+++.+ |+++ ...+.+++++. ..++|+|+| .+..+++..+|+
T Consensus 212 ~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~-g~~~--~~~~~l~~~~~---~~~~v~~~g----~~~~~~~~~~~~ 281 (384)
T 1vgv_A 212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPV-HLNP--NVREPVNRILG---HVKNVILID----PQEYLPFVWLMN 281 (384)
T ss_dssp CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEEC-CBCH--HHHHHHHHHHT---TCTTEEEEC----CCCHHHHHHHHH
T ss_pred eCCccccchHHHHHHHHHHHHHhhCCCeEEEEEc-CCCH--HHHHHHHHHhh---cCCCEEEeC----CCCHHHHHHHHH
Confidence 8888765 99999999999998766666555532 3322 12344444432 236899988 455679999999
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
. ||+||+|| |.+++|||+||+|||+|+. ||..|++++| +|+++++ |+++++++|.+++ +||+.+++|
T Consensus 282 ~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll----~d~~~~~~~ 349 (384)
T 1vgv_A 282 H-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLL----KDENEYQAM 349 (384)
T ss_dssp H-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHH----HCHHHHHHH
T ss_pred h-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHH----hChHHHhhh
Confidence 7 99999999 4458999999999999986 9999999988 9999988 9999999999998 799999999
Q ss_pred HHHHHHH
Q 005365 690 SLGGLKR 696 (700)
Q Consensus 690 s~~ar~r 696 (700)
+++++++
T Consensus 350 ~~~~~~~ 356 (384)
T 1vgv_A 350 SRAHNPY 356 (384)
T ss_dssp HSSCCTT
T ss_pred hhccCCC
Confidence 9877543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=238.42 Aligned_cols=283 Identities=15% Similarity=0.150 Sum_probs=186.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHH-hcCCcEEEEecCCccccC----CCCchhhhh--c-----ccccchhhhhhHHHHHHh
Q 005365 404 GKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKY----PDSDIYWKN--L-----DDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~-~~giP~V~t~H~l~~~~~----~~~~~~w~~--~-----~~~y~~~~~~~~E~~al~ 471 (700)
.+|||+|+|.|..++++.++.+ ..++|.|+|+|+.....+ ...+.++.. + .....+...+..|+.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 4699999999999998888875 458999999999854333 111112210 0 000112223445888899
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----------------------cC--CCCc
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----------------------VS--PGAD 527 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----------------------Ip--~G~d 527 (700)
.||.|+|+|+..+..++..++.- +... |+||||+ .+++- .. -+.+
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll~r~--------~d~i-IpNGID~--~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~ 328 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLLKRK--------PDGI-LPNGLNV--IKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFD 328 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHTSSC--------CSEE-CCCCBCC--CCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSC
T ss_pred hCCEEEECCHHHHHHHHHHhcCC--------CCEE-EcCCccc--cccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCC
Confidence 99999999998887776654321 3344 9999984 22211 00 0221
Q ss_pred ----cccc-cCCch-hhhchhhHHHHHHHHhhc----CCCc---cEEEEecCChh-------------------------
Q 005365 528 ----MSIY-FPYTE-EKRRLKSFHPEIEELLYS----DVEN---KEHLKESKDLE------------------------- 569 (700)
Q Consensus 528 ----~~~F-~g~~~-~~Kgl~~Ll~Ai~~Ll~~----~~~~---~l~i~g~Gd~e------------------------- 569 (700)
..+| .||++ ..||++.+++|+.+|... ..+. .+.++.++...
T Consensus 329 ~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 408 (725)
T 3nb0_A 329 LDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTS 408 (725)
T ss_dssp GGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 2234 58998 789999999999988753 1122 22222222110
Q ss_pred -----------------------hHH------------------------------------HHHHHHHHHHHcCCCCc-
Q 005365 570 -----------------------EQA------------------------------------EMKKMYSLIDQYKLNGQ- 589 (700)
Q Consensus 570 -----------------------e~~------------------------------------~~~~l~~li~~l~L~~~- 589 (700)
+.. .-+.+...++++++.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~ 488 (725)
T 3nb0_A 409 IGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSP 488 (725)
T ss_dssp HHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCT
T ss_pred HhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCc
Confidence 000 00122234456677665
Q ss_pred -----EEEeccccCc---CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCC------
Q 005365 590 -----FRWISSQMNR---VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------ 655 (700)
Q Consensus 590 -----V~flG~~~d~---v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~------ 655 (700)
|.|++.-.+. +-..++..+++. ||+||+||++|+||++++||||||+|||+|+.||.+|+|.++.
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~-advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~ 567 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRG-CHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAK 567 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHH-CSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHH
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhh-ceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCC
Confidence 6676522211 112257888886 9999999999999999999999999999999999999998863
Q ss_pred -eEEEEC---CCCHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHH
Q 005365 656 -SGYHID---PYHGEQAAEILVDFFEKCK-ADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 656 -~G~lv~---p~D~eaLAeaI~~ll~~~~-~dp~~~~~ms~~ar~ra~ 698 (700)
+|++++ +.|+++++++|.+++..+. .++..+.+|+++|++++.
T Consensus 568 ~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 568 DYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp HTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 699884 5677777777777665433 578889999999987654
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=225.07 Aligned_cols=270 Identities=13% Similarity=0.016 Sum_probs=181.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
++|+||+|.+...+++..+.++. ++|++++.|..++.. ..|..+ .+...-...+-.+|.|...+...
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~-----~~~~~l-------p~~~~il~~ll~~d~i~f~~~~~ 190 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP-----EIFNAL-------PTYDTLLEQLCDYDLLGFQTEND 190 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH-----HHHTTS-------TTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCH-----HHHhhC-------ccHHHHHHhhhccCeEEEECHHH
Confidence 67999999987766776666544 799999999853221 111111 01000112345678888777654
Q ss_pred HHhhhhh----hccccc----ccccc-CCCeEEeecCCCCCCCcceec---------------CCCCccccccCCchhhh
Q 005365 484 IAGSKDT----VGQYES----HTAFT-LPGLYRVVHGIDVFDPKFNIV---------------SPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~----~~~y~~----~~~~~-~p~l~~v~nGId~~~~k~~vI---------------p~G~d~~~F~g~~~~~K 539 (700)
...+-.. ++.-.. ..... ...+.++++|||. ..|... ..+....+|++++.+.|
T Consensus 191 ~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~--~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~K 268 (482)
T 1uqt_A 191 RLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEP--KEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSK 268 (482)
T ss_dssp HHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCH--HHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGG
T ss_pred HHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCH--HHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccC
Confidence 4332211 110000 00001 1135566778862 222110 01334567899999999
Q ss_pred chhhHHHHHHHHhhcCCC----ccEEEEecC---Chhh-HHHHHHHHHHHHHcC----CC--CcEEEe-ccccCcCChhH
Q 005365 540 RLKSFHPEIEELLYSDVE----NKEHLKESK---DLEE-QAEMKKMYSLIDQYK----LN--GQFRWI-SSQMNRVRNGE 604 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G---d~ee-~~~~~~l~~li~~l~----L~--~~V~fl-G~~~d~v~~~e 604 (700)
|+..+++|++.++...|+ ..++++|.+ ++++ ....+++.+++.+++ .. ..|+|+ | .++.++
T Consensus 269 gi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g----~v~~~e 344 (482)
T 1uqt_A 269 GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKL 344 (482)
T ss_dssp CHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHH
T ss_pred CHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCC----CCCHHH
Confidence 999999999999887765 335666653 2332 123445556655533 22 237764 5 677899
Q ss_pred HHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 605 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 605 l~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
+..+|+. ||+||+||..||||++++||||||+ |+|+|+.+|..+.+. +|++++|.|++++|++|.++++
T Consensus 345 l~~ly~~-ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~-- 418 (482)
T 1uqt_A 345 LMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALT-- 418 (482)
T ss_dssp HHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHT--
T ss_pred HHHHHHH-ccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHc--
Confidence 9999996 9999999999999999999999997 999999888888883 7899999999999999999982
Q ss_pred cCCHHHHHHHHHHHHHHHHh
Q 005365 680 KADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ra~e 699 (700)
.+++.++++++++++++.+
T Consensus 419 -~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 419 -MSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp -CCHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 3678899999999998865
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-23 Score=201.63 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=140.2
Q ss_pred cccccCCch-hhhchhhHHHHHHHHh--hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEE-eccccCcCChh
Q 005365 528 MSIYFPYTE-EKRRLKSFHPEIEELL--YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQMNRVRNG 603 (700)
Q Consensus 528 ~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll--~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~d~v~~~ 603 (700)
..+|.|+.. +.||++.+++++..+. ...++..++++|.++. ...+.+++++++++ +|+| +| .++.+
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~---~~~~~l~~~~~~~~---~v~~~~g----~~~~~ 107 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---ELEGWARSLEEKHG---NVKVITE----MLSRE 107 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH---HHHHHHHHHHHHCT---TEEEECS----CCCHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCCh---HHHHHHHHHHHhcC---CEEEEec----cCCHH
Confidence 678999999 9999999999999997 6666778888887653 23467788888876 7999 99 66678
Q ss_pred HHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-C
Q 005365 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-D 682 (700)
Q Consensus 604 el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-d 682 (700)
++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ + |
T Consensus 108 ~~~~~~~~-ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~ 181 (200)
T 2bfw_A 108 FVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELS 181 (200)
T ss_dssp HHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCC
T ss_pred HHHHHHHH-CCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcC
Confidence 99999997 999999999999999999999999999999999999999 999999999999999999999998 7 9
Q ss_pred HHHHHHHHHHHHHHHHh
Q 005365 683 PSYWDKISLGGLKRIEE 699 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~e 699 (700)
++.+++|+++|++++.+
T Consensus 182 ~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 182 RSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999864
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=204.36 Aligned_cols=255 Identities=11% Similarity=0.062 Sum_probs=162.6
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~ 471 (700)
.+.+.+.+. +||+||+|... ..+.+.++++..|+|++++.|+..... .+.. +.. ....+...+
T Consensus 82 ~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~------~~~-~~~~~~~~~ 145 (376)
T 1v4v_A 82 QAARALKEM---GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGN------LKEP------FPE-EANRRLTDV 145 (376)
T ss_dssp HHHHHHHHT---TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSC------TTSS------TTH-HHHHHHHHH
T ss_pred HHHHHHHHc---CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcccc------ccCC------Cch-HHHHHHHHH
Confidence 344455544 89999998653 445567788889999876544431110 0000 000 011234566
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----Ccce-ecCCCCccccccCCchhhhchhhH
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----PKFN-IVSPGADMSIYFPYTEEKRRLKSF 544 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~k~~-vIp~G~d~~~F~g~~~~~Kgl~~L 544 (700)
.+|.++++|....+.+.+. + +....+..+.|++ +.+. ..+. -.+++....++.|+....|++..+
T Consensus 146 ~~~~~~~~s~~~~~~l~~~-g-------~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~l 217 (376)
T 1v4v_A 146 LTDLDFAPTPLAKANLLKE-G-------KREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDL 217 (376)
T ss_dssp HCSEEEESSHHHHHHHHTT-T-------CCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHH
T ss_pred HhceeeCCCHHHHHHHHHc-C-------CCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHH
Confidence 7999999997765433321 1 1111233444432 2100 0000 011111123467888777899999
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
++|++.+....++..+++. .|+++ ...+.++++++ ..++|+|+| .+...++..+|+. ||+||.|| |
T Consensus 218 l~a~~~l~~~~~~~~lv~~-~g~~~--~~~~~l~~~~~---~~~~v~~~g----~~g~~~~~~~~~~-ad~~v~~S--~- 283 (376)
T 1v4v_A 218 AQALKRVAEAFPHLTFVYP-VHLNP--VVREAVFPVLK---GVRNFVLLD----PLEYGSMAALMRA-SLLLVTDS--G- 283 (376)
T ss_dssp HHHHHHHHHHCTTSEEEEE-CCSCH--HHHHHHHHHHT---TCTTEEEEC----CCCHHHHHHHHHT-EEEEEESC--H-
T ss_pred HHHHHHHHhhCCCeEEEEE-CCCCH--HHHHHHHHHhc---cCCCEEEEC----CCCHHHHHHHHHh-CcEEEECC--c-
Confidence 9999998776666655544 23332 12344555443 246899998 4445688899996 99999999 3
Q ss_pred ccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
|+ ++|||+||+|||++ +.||..+++.+| +|++++ .|+++++++|.+++ +|++.+++|++++
T Consensus 284 -g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~la~~i~~ll----~d~~~~~~~~~~~ 345 (376)
T 1v4v_A 284 -GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGVYRVVKGLL----ENPEELSRMRKAK 345 (376)
T ss_dssp -HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHHHHHHHHHH----TCHHHHHHHHHSC
T ss_pred -CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHHHHHHHHHH----hChHhhhhhcccC
Confidence 44 88999999999998 579999988765 899996 49999999999998 8999999998754
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-20 Score=206.98 Aligned_cols=282 Identities=12% Similarity=0.046 Sum_probs=194.2
Q ss_pred HHHHHHHHHcC-CCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCCchhhhhcccccchhh--hhhHHHH
Q 005365 393 DVAVEIAKELQ-GKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSC--QFTADLI 468 (700)
Q Consensus 393 ~~~~~l~~~~~-~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~--~~~~E~~ 468 (700)
.++..+.+... ..-|+|..|.+...+++..+.++ .+.++.+-.|..++.. . .|. ... +...-..
T Consensus 136 ~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~----e-~f~-------~Lp~~~r~ell~ 203 (496)
T 3t5t_A 136 DFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSA----D-YWR-------ILPKEIRTGILH 203 (496)
T ss_dssp HHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCH----H-HHT-------TSCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCH----H-HHh-------hCcHhHHHHHHH
Confidence 34444444432 25689999998887777777654 4679999999764332 1 111 111 1111224
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhcccc-c-----c-ccccC----CCeEEeecCCCCCCCcceecC-----------CCC
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYE-S-----H-TAFTL----PGLYRVVHGIDVFDPKFNIVS-----------PGA 526 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~-~-----~-~~~~~----p~l~~v~nGId~~~~k~~vIp-----------~G~ 526 (700)
.+-.+|.|...++.....+.+.....- . . ..... ..+..+++|||. .+|.-.. .+.
T Consensus 204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~--~~f~~~~~~~~~~lr~~~~~~ 281 (496)
T 3t5t_A 204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSP--LTLDGRNPQLPEGIEEWADGH 281 (496)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCG--GGC----CCCCTTHHHHHTTS
T ss_pred HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCH--HHhchhhHHHHHHHHHHhCCc
Confidence 678899999999877654333221110 0 0 00000 124566778873 2332111 133
Q ss_pred ccccccCCchhhhchhhHHHHHHHHhhcCCCcc---EEEEec---CChhh-HHHHHHHHHHHHHcC----CCCcEEEecc
Q 005365 527 DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK---EHLKES---KDLEE-QAEMKKMYSLIDQYK----LNGQFRWISS 595 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~---l~i~g~---Gd~ee-~~~~~~l~~li~~l~----L~~~V~flG~ 595 (700)
...++++++.+.||+..+++|+ .++...|+.. ++++|. +++++ .+..+++.+++.+.+ .. .|+|+|
T Consensus 282 ~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g- 358 (496)
T 3t5t_A 282 RLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDN- 358 (496)
T ss_dssp EEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEE-
T ss_pred eEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeC-
Confidence 4567889999999999999999 8888877643 444554 33332 233455666665543 22 699999
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcC---CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG---LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~G---lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.++.+++..+|+. ||+||+||.+||||++++|||||| .|+|+|..+|..+.+ +.+|++|+|.|++++|++|
T Consensus 359 ---~v~~~el~aly~~-ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI 432 (496)
T 3t5t_A 359 ---DNDVNHTIACFRR-ADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAI 432 (496)
T ss_dssp ---CCCHHHHHHHHHH-CSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHH
T ss_pred ---CCCHHHHHHHHHh-ccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHH
Confidence 5678999999996 999999999999999999999997 999999999999988 3479999999999999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 673 VDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 673 ~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
.++++ .+++.++++.+++++++.++
T Consensus 433 ~~aL~---m~~~er~~r~~~~~~~V~~~ 457 (496)
T 3t5t_A 433 SAALA---AGPRQRAEAAARRRDAARPW 457 (496)
T ss_dssp HHHHH---CCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHc---CCHHHHHHHHHHHHHHHHHC
Confidence 99984 56788999999999988753
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=184.68 Aligned_cols=151 Identities=13% Similarity=0.117 Sum_probs=130.7
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..+|+|+..+.||++.+++++..+. ..++..++++|.|+. .+.++++++++++ +|+| | .++.+++..
T Consensus 4 ~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~-----~~~~~~~~~~~~~--~v~~-g----~~~~~~~~~ 70 (166)
T 3qhp_A 4 KIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD-----EKKIKLLAQKLGV--KAEF-G----FVNSNELLE 70 (166)
T ss_dssp EEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT-----HHHHHHHHHHHTC--EEEC-C----CCCHHHHHH
T ss_pred EEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc-----HHHHHHHHHHcCC--eEEE-e----ecCHHHHHH
Confidence 3578999999999999999999874 335667777776532 2567788888887 7999 9 566799999
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCC-CEEE-cCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFA-TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-PVVA-T~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
+|+. +|++|+||.+|+||++++|||+||+ |||+ ++.||..+++.++.+ +++++|+++++++|.+++ +|++.
T Consensus 71 ~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~----~~~~~ 143 (166)
T 3qhp_A 71 ILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL----ENKLE 143 (166)
T ss_dssp HHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH----HCHHH
T ss_pred HHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH----hCHHH
Confidence 9997 9999999999999999999999998 9999 568999999988655 889999999999999998 79999
Q ss_pred HHHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRIE 698 (700)
Q Consensus 686 ~~~ms~~ar~ra~ 698 (700)
+++|+++|++++.
T Consensus 144 ~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 144 RERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=210.50 Aligned_cols=203 Identities=12% Similarity=-0.002 Sum_probs=147.6
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCc-cccccCCchhhhchhhHH
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD-MSIYFPYTEEKRRLKSFH 545 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d-~~~F~g~~~~~Kgl~~Ll 545 (700)
+..++.+|.|++.|...++.+.+. + .+.+.+++|+.- +..... ..... ..++.+. ...|+.+.++
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l~~~-g---------~~ki~vi~n~~f--~~~~~~-~~~l~~~vi~~~~-~~~k~~~~ll 213 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKFKTF-G---------AKRVFSCGNLKF--ICQKGK-GIKLKGEFIVAGS-IHTGEVEIIL 213 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHTT-T---------CCSEEECCCGGG--CCCCCS-CCCCSSCEEEEEE-ECGGGHHHHH
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-C---------CCeEEEcCCCcc--CCCcCh-hhhhcCCEEEEEe-CCCchHHHHH
Confidence 456889999999997776544331 1 123455555521 110000 00001 1222222 3468899999
Q ss_pred HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC--------CcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 546 PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN--------GQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 546 ~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~--------~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
+|+..+....++..++++|.|. +. .++++++++++++. ++|.|.|.+ +++..+|+. +|+++
T Consensus 214 ~A~~~l~~~~p~~~lvivG~g~--~~--~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~~-aDv~v 282 (374)
T 2xci_A 214 KAFKEIKKTYSSLKLILVPRHI--EN--AKIFEKKARDFGFKTSFFENLEGDVILVDRF------GILKELYPV-GKIAI 282 (374)
T ss_dssp HHHHHHHTTCTTCEEEEEESSG--GG--HHHHHHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGGG-EEEEE
T ss_pred HHHHHHHhhCCCcEEEEECCCH--HH--HHHHHHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHHh-CCEEE
Confidence 9999998877888888888553 21 14677888888886 468887732 568888886 99988
Q ss_pred eCCC-CCCccHHHHHHHHcCCCEEEc-CCCCcccccccC-CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 618 QPAL-YEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNG-KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 618 ~PS~-~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg-~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+||. .|++|++++||||||+|||++ +.++.+|++++. .+|++++++|+++|+++|.+++ +| +.+++|+++|+
T Consensus 283 l~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar 357 (374)
T 2xci_A 283 VGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSR 357 (374)
T ss_dssp ECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHH
T ss_pred ECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHH
Confidence 8865 477899999999999999975 789999988763 5788899999999999999998 68 99999999999
Q ss_pred HHHHh
Q 005365 695 KRIEE 699 (700)
Q Consensus 695 ~ra~e 699 (700)
+++++
T Consensus 358 ~~~~~ 362 (374)
T 2xci_A 358 EIKGC 362 (374)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99865
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=188.27 Aligned_cols=154 Identities=18% Similarity=0.180 Sum_probs=132.7
Q ss_pred cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH--HcCCCCcEEEeccccCc
Q 005365 522 VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID--QYKLNGQFRWISSQMNR 599 (700)
Q Consensus 522 Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~--~l~L~~~V~flG~~~d~ 599 (700)
++......+|+|+..+.||++.+++++..+ ++..++++|.+... +.++++++ ++++.++|+|+| .
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~-----~~l~~~~~~~~~~l~~~v~~~g----~ 85 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKG-----DHAERYARKIMKIAPDNVKFLG----S 85 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTT-----STHHHHHHHHHHHSCTTEEEEE----S
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccH-----HHHHHHHHhhhcccCCcEEEeC----C
Confidence 355566788999999999999999999887 47788888877543 35667777 778899999999 6
Q ss_pred CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 600 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 600 v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ ++|+++++++|.+++
T Consensus 86 ~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l~--- 160 (177)
T 2f9f_A 86 VSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMKKVS--- 160 (177)
T ss_dssp CCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHHHHH---
Confidence 667899999997 999999999999999999999999999999999999999999999999 899999999999998
Q ss_pred cCCHHH-HHHHHHHHH
Q 005365 680 KADPSY-WDKISLGGL 694 (700)
Q Consensus 680 ~~dp~~-~~~ms~~ar 694 (700)
+|++. +++++++|+
T Consensus 161 -~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 161 -KNPDKFKKDCFRRAK 175 (177)
T ss_dssp -HCTTTTHHHHHHHHH
T ss_pred -hCHHHHHHHHHHHHh
Confidence 67664 555555544
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=179.18 Aligned_cols=345 Identities=12% Similarity=0.044 Sum_probs=190.6
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
+..|||++++.. ++|....++ .|+++|+++||+|+ ++|.... ....
T Consensus 18 ~~~MrIl~~~~~-------------~~Gh~~~~~--------~la~~L~~~GheV~----v~~~~~~-------~~~~-- 63 (412)
T 3otg_A 18 GRHMRVLFASLG-------------THGHTYPLL--------PLATAARAAGHEVT----FATGEGF-------AGTL-- 63 (412)
T ss_dssp CCSCEEEEECCS-------------SHHHHGGGH--------HHHHHHHHTTCEEE----EEECGGG-------HHHH--
T ss_pred cceeEEEEEcCC-------------CcccHHHHH--------HHHHHHHHCCCEEE----EEccHHH-------HHHH--
Confidence 456899999833 256666666 67777899999999 9886411 1011
Q ss_pred ecCccceEEEEecCCCccccc---c----c-------cccc-ccchhhH-----HHHHHHHHHHHHHHcCCCCeEEEEcC
Q 005365 354 VYGTKYSDILRVPFRTEKGVV---R----K-------WISR-FEVWPYL-----ETYTEDVAVEIAKELQGKPDLIIGNY 413 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~---~----~-------~lsr-~~i~~~l-----~~f~~~~~~~l~~~~~~~pDlIh~h~ 413 (700)
...++.++.++.....++. . . .... ..+...+ ......+.+.+.+. +||+||++.
T Consensus 64 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~pDvVv~~~ 138 (412)
T 3otg_A 64 --RKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL---RPDLVVQEI 138 (412)
T ss_dssp --HHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH---CCSEEEEET
T ss_pred --HhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc---CCCEEEECc
Confidence 0125667766630000000 0 0 0000 0011111 11223445555555 899999974
Q ss_pred CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhH---HHHHHhhCCEEEecCHHHHHhhhhh
Q 005365 414 SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA---DLIAMNHTDFIITSTFQEIAGSKDT 490 (700)
Q Consensus 414 ~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~---E~~al~~AD~IIt~S~~~~~~~k~~ 490 (700)
.. +.+.+++++.|+|+|++.|+....... ....|..+.. +...+.. ....+..+|.+++.+....+...+.
T Consensus 139 ~~--~~~~~aa~~~giP~v~~~~~~~~~~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 212 (412)
T 3otg_A 139 SN--YGAGLAALKAGIPTICHGVGRDTPDDL-TRSIEEEVRG---LAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFR 212 (412)
T ss_dssp TC--HHHHHHHHHHTCCEEEECCSCCCCSHH-HHHHHHHHHH---HHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHH
T ss_pred hh--hHHHHHHHHcCCCEEEecccccCchhh-hHHHHHHHHH---HHHHcCCCCCcccccCCCCeEEeeCCHHhcCCccc
Confidence 33 346678889999999988875322100 0000000000 0000000 0001246788888886554322221
Q ss_pred hccccccccccCCCeEEeecCCCCCCCcc-eecCCCCc-cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh
Q 005365 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKF-NIVSPGAD-MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL 568 (700)
Q Consensus 491 ~~~y~~~~~~~~p~l~~v~nGId~~~~k~-~vIp~G~d-~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ 568 (700)
+... ..|-.+...++.. ...++ ...+++.. ..++.|+.. .++...+..+++.+... +..+++++++..
T Consensus 213 ~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~ 282 (412)
T 3otg_A 213 ARPR------RHELRPVPFAEQG-DLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSL 282 (412)
T ss_dssp TCTT------EEECCCCCCCCCC-CCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSC
T ss_pred CCCC------cceeeccCCCCCC-CCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCC
Confidence 1100 0000000001100 01111 11122222 234556664 55666666666665433 344444443322
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-- 646 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG-- 646 (700)
.. +.+. ++.++|+|+|+. + +..+++. +|+||.++ .+.+++|||+||+|+|++..++
T Consensus 283 -~~---~~l~------~~~~~v~~~~~~----~---~~~~l~~-ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q 340 (412)
T 3otg_A 283 -DV---SGLG------EVPANVRLESWV----P---QAALLPH-VDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDS 340 (412)
T ss_dssp -CC---TTCC------CCCTTEEEESCC----C---HHHHGGG-CSEEEESC----CHHHHHHHHHHTCCEEECCCSTTH
T ss_pred -Ch---hhhc------cCCCcEEEeCCC----C---HHHHHhc-CcEEEECC----chHHHHHHHHhCCCEEecCCchhH
Confidence 11 1111 356789999954 2 5667775 99999885 2489999999999999976554
Q ss_pred --cccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 647 --PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 647 --~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
..+.+.++.+|++++++ |+++++++|.+++ +||+.+++|++.+++.+..
T Consensus 341 ~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~~~ 393 (412)
T 3otg_A 341 FANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLL----AEESYRAGARAVAAEIAAM 393 (412)
T ss_dssp HHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHhcC
Confidence 78888888899999987 9999999999998 7999999999999887653
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.4e-17 Score=172.49 Aligned_cols=232 Identities=12% Similarity=0.083 Sum_probs=156.9
Q ss_pred CCCeEEEEcCCCc---hHHHHHHHH--hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 404 GKPDLIIGNYSDG---NIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 404 ~~pDlIh~h~~~~---~lva~lla~--~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
.++|+|+.+++.. .+.+.++.+ +.++|+|+.+|++++..... ..+ .. ..|+..+++||.||+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~---------~~~--~~--~~E~~~y~~aD~Ii~ 139 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSG---------NFY--LM--DRTIAYYNKADVVVA 139 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGG---------GGG--GH--HHHHHHHTTCSEEEE
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCcc---------chh--hH--HHHHHHHHHCCEEEE
Confidence 4799999976543 233444554 44899999999997654210 111 11 248899999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCCCccee-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFDPKFNI-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV 556 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~~k~~v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~ 556 (700)
.|+..++.+.+ +. .+.-..++.++ +. ...... .+......+|.|++.+...+..+ .+
T Consensus 140 ~S~~~~~~l~~----~G------~~~~ki~~~~~~~~-~~~~~~~~~~~~~~i~yaG~l~k~~~L~~l----------~~ 198 (339)
T 3rhz_A 140 PSQKMIDKLRD----FG------MNVSKTVVQGMWDH-PTQAPMFPAGLKREIHFPGNPERFSFVKEW----------KY 198 (339)
T ss_dssp SCHHHHHHHHH----TT------CCCSEEEECCSCCC-CCCCCCCCCEEEEEEEECSCTTTCGGGGGC----------CC
T ss_pred CCHHHHHHHHH----cC------CCcCceeecCCCCc-cCcccccccCCCcEEEEeCCcchhhHHHhC----------CC
Confidence 99666543332 21 11111122232 11 001000 11122356899999854333221 35
Q ss_pred CccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC-CC------CCCccHHH
Q 005365 557 ENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP-AL------YEAFGLTV 629 (700)
Q Consensus 557 ~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P-S~------~E~fGl~v 629 (700)
+..++++|.|... .++ +|+|+| +++.+|+..+++. +|+.+.+ +. ...+|.++
T Consensus 199 ~~~f~ivG~G~~~---------------~l~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl 257 (339)
T 3rhz_A 199 DIPLKVYTWQNVE---------------LPQ-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKL 257 (339)
T ss_dssp SSCEEEEESCCCC---------------CCT-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHH
T ss_pred CCeEEEEeCCccc---------------CcC-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHH
Confidence 7889999988531 245 899999 7778999999986 6776665 11 12568999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+||||||+|||+++.|+.+++|+++.+|+.++ +.++++++|..+ +++.+++|+++|++.++
T Consensus 258 ~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a~ 318 (339)
T 3rhz_A 258 GSFLAAGIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV------NEDEYIELVKNVRSFNP 318 (339)
T ss_dssp HHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHTH
T ss_pred HHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 688888888764 56789999999988754
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.6e-15 Score=159.64 Aligned_cols=321 Identities=12% Similarity=0.025 Sum_probs=175.3
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|..||+|.+ ..|||-.. .+| .++++|+++||+|. ++|....-. .+.+
T Consensus 1 M~~~i~i~~-------------GGTgGHi~------pal--ala~~L~~~g~~V~----~vg~~~g~e--------~~~v 47 (365)
T 3s2u_A 1 MKGNVLIMA-------------GGTGGHVF------PAL--ACAREFQARGYAVH----WLGTPRGIE--------NDLV 47 (365)
T ss_dssp --CEEEEEC-------------CSSHHHHH------HHH--HHHHHHHHTTCEEE----EEECSSSTH--------HHHT
T ss_pred CCCcEEEEc-------------CCCHHHHH------HHH--HHHHHHHhCCCEEE----EEECCchHh--------hchh
Confidence 667888764 12566433 344 67888899999999 887532110 0001
Q ss_pred cCccceEEEEecCCCccc--ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 355 YGTKYSDILRVPFRTEKG--VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~--~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
+ ..++.+..+|..+..+ ..+. +. ..+..+.. ...+.+.+++. +||+|++.....+..+.++++.+|+|++
T Consensus 48 ~-~~g~~~~~i~~~~~~~~~~~~~-~~--~~~~~~~~-~~~~~~~l~~~---~PDvVi~~g~~~s~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 48 P-KAGLPLHLIQVSGLRGKGLKSL-VK--APLELLKS-LFQALRVIRQL---RPVCVLGLGGYVTGPGGLAARLNGVPLV 119 (365)
T ss_dssp G-GGTCCEEECC-----------------CHHHHHHH-HHHHHHHHHHH---CCSEEEECSSSTHHHHHHHHHHTTCCEE
T ss_pred h-hcCCcEEEEECCCcCCCCHHHH-HH--HHHHHHHH-HHHHHHHHHhc---CCCEEEEcCCcchHHHHHHHHHcCCCEE
Confidence 1 1244555555443221 1110 10 11111111 22344556666 8999999887777788888999999998
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
+.-.+... + + ..++..+.++.|.+..+.. +. +. .....+.+.+
T Consensus 120 ihe~n~~~-----G---~--------------~nr~l~~~a~~v~~~~~~~-------~~-~~-------~k~~~~g~pv 162 (365)
T 3s2u_A 120 IHEQNAVA-----G---T--------------ANRSLAPIARRVCEAFPDT-------FP-AS-------DKRLTTGNPV 162 (365)
T ss_dssp EEECSSSC-----C---H--------------HHHHHGGGCSEEEESSTTS-------SC-C----------CEECCCCC
T ss_pred EEecchhh-----h---h--------------HHHhhccccceeeeccccc-------cc-Cc-------CcEEEECCCC
Confidence 64332211 0 0 0223456688877665321 10 00 0111111111
Q ss_pred CC-----CCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC
Q 005365 513 DV-----FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 513 d~-----~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~ 587 (700)
.. ...+...-+......++.|.....+..+.+.+++..+.... +.. ++...|.+.. +.+.+..++.+
T Consensus 163 r~~~~~~~~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~-~~~-vi~~~G~~~~----~~~~~~~~~~~-- 234 (365)
T 3s2u_A 163 RGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEI-RPA-IRHQAGRQHA----EITAERYRTVA-- 234 (365)
T ss_dssp CGGGCCCTTSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTT-CCE-EEEECCTTTH----HHHHHHHHHTT--
T ss_pred chhhccchhhhcccCCCCcEEEEECCcCCccccchhhHHHHHhccccc-ceE-EEEecCcccc----ccccceecccc--
Confidence 10 00111111111222344455555555556666666654322 222 2333343321 23444445444
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc--------ccccccCCeEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP--------AEIIVNGKSGYH 659 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~--------~EiI~dg~~G~l 659 (700)
.++++.|+.+ ++..+|+. ||++|.-+ -++|+.|+|++|+|+|..+.... ++.+.+...|++
T Consensus 235 ~~~~v~~f~~------dm~~~l~~-aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~ 303 (365)
T 3s2u_A 235 VEADVAPFIS------DMAAAYAW-ADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRL 303 (365)
T ss_dssp CCCEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEE
T ss_pred cccccccchh------hhhhhhcc-ceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEE
Confidence 4577888654 36777886 99999764 37899999999999998765432 234555567888
Q ss_pred ECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
++.. +++.|+++|.+++ .||+.+++|++++++.
T Consensus 304 l~~~~~~~~~L~~~i~~ll----~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 304 LPQKSTGAAELAAQLSEVL----MHPETLRSMADQARSL 338 (365)
T ss_dssp CCTTTCCHHHHHHHHHHHH----HCTHHHHHHHHHHHHT
T ss_pred eecCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHhc
Confidence 8765 5899999999998 8999999999999875
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-15 Score=164.72 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=75.8
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+ ++. ..+++. +|++|.. +-+.+++|||+||+|+|+. +..+..+.+++...|++++
T Consensus 282 ~~~~v~~~~~----~~~---~~ll~~-ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~ 349 (398)
T 4fzr_A 282 LPEGVLAAGQ----FPL---SAIMPA-CDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVP 349 (398)
T ss_dssp CCTTEEEESC----CCH---HHHGGG-CSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC
T ss_pred CCCcEEEeCc----CCH---HHHHhh-CCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecC
Confidence 5788999994 433 445554 9999975 4478999999999999994 5557788888889999998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++ |+++++++|.+++ +||+++++|++.+++...
T Consensus 350 ~~~~~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 350 WEQAGVESVLAACARIR----DDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp -------CHHHHHHHHH----HCTHHHHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHc
Confidence 87 7899999999998 799999999998887643
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=165.14 Aligned_cols=140 Identities=10% Similarity=-0.020 Sum_probs=101.9
Q ss_pred ccCCchhhhch-hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 531 YFPYTEEKRRL-KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 531 F~g~~~~~Kgl-~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
..|+....|+. ..+++++.+. ...++..+++.+++... +.+. ++.++|++.|+ ++..+++
T Consensus 224 ~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~-----~~l~------~~~~~v~~~~~----~~~~~ll--- 284 (391)
T 3tsa_A 224 CMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR-----ALLT------DLPDNARIAES----VPLNLFL--- 284 (391)
T ss_dssp ECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-----GGCT------TCCTTEEECCS----CCGGGTG---
T ss_pred EcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch-----hhcc------cCCCCEEEecc----CCHHHHH---
Confidence 34666554444 6666776666 55556666666554221 1111 35678999995 4445554
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECC----CCHHHHHHHHHHHHHhccC
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP----YHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p----~D~eaLAeaI~~ll~~~~~ 681 (700)
+ +||++|.. +.+.+++|||+||+|+|+. +..+..+.+.+...|..+++ .|+++++++|.+++ +
T Consensus 285 ~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll----~ 355 (391)
T 3tsa_A 285 R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVL----G 355 (391)
T ss_dssp G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHH----T
T ss_pred h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHH----c
Confidence 4 59999975 3457999999999999994 45567788888889999998 78999999999998 8
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
||+.+++|++.+++...
T Consensus 356 ~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 356 DTGFAAAAIKLSDEITA 372 (391)
T ss_dssp CTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHc
Confidence 99999999988877643
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.1e-14 Score=155.64 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=79.4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|+|+|+.+ .. .+|+. +|+||..+- +++++|||+||+|+|+++.++ ..+.+.+...|+.++
T Consensus 281 ~~~~v~~~~~~~----~~---~~l~~-ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~ 348 (430)
T 2iyf_A 281 LPDNVEVHDWVP----QL---AILRQ-ADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLA 348 (430)
T ss_dssp CCTTEEEESSCC----HH---HHHTT-CSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC
T ss_pred CCCCeEEEecCC----HH---HHhhc-cCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcC
Confidence 567899999544 33 56665 999999752 379999999999999998765 466677777899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++ |+++++++|.+++ +|++.++++++.+++...
T Consensus 349 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 349 TEEATADLLRETALALV----DDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp CC-CCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHh
Confidence 87 8999999999998 799999999988877653
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-14 Score=153.02 Aligned_cols=137 Identities=14% Similarity=0.027 Sum_probs=97.0
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
.+++|+.... ++...+..+++.+... +..+++++++... +.+. +++++|++.|+. +.. .
T Consensus 236 ~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~-----~~l~------~~~~~v~~~~~~----~~~---~ 295 (398)
T 3oti_A 236 AITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDI-----SPLG------TLPRNVRAVGWT----PLH---T 295 (398)
T ss_dssp EECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCC-----GGGC------SCCTTEEEESSC----CHH---H
T ss_pred EEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcCh-----hhhc------cCCCcEEEEccC----CHH---H
Confidence 3456777655 4666666666666543 4566666555321 1111 357789999954 334 4
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE----cCCCCcc--cccccCCeEEEECCC--CHHHHHHHHHHHHHhc
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCKGGPA--EIIVNGKSGYHIDPY--HGEQAAEILVDFFEKC 679 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA----T~~GG~~--EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~ 679 (700)
+++. +|+||.. +-+.+++|||++|+|+|+ .+..+.. +.+++...|+.+++. ++++++ +++
T Consensus 296 ll~~-ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll--- 363 (398)
T 3oti_A 296 LLRT-CTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLI--- 363 (398)
T ss_dssp HHTT-CSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHH---
T ss_pred HHhh-CCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHH---
Confidence 5554 9999975 445799999999999999 5678888 999988899999876 566665 666
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 005365 680 KADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ra~ 698 (700)
+||+++++|++.+++...
T Consensus 364 -~~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 364 -GDESLRTAAREVREEMVA 381 (398)
T ss_dssp -HCHHHHHHHHHHHHHHHT
T ss_pred -cCHHHHHHHHHHHHHHHh
Confidence 799999999998887653
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.8e-14 Score=152.92 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCCch-HHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHH
Q 005365 388 ETYTEDVAVEIAKELQGKPDLIIGNYSDGN-IVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTAD 466 (700)
Q Consensus 388 ~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~-lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E 466 (700)
......+.+.+.+. +||+||++..... +.+.+.+++.|||+++..++. .. +... ..|.. ... -
T Consensus 97 ~~~~~~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-rs-~~~~-~~~~~-----~~~-----r 160 (396)
T 3dzc_A 97 SKILLGMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-RT-GNIY-SPWPE-----EGN-----R 160 (396)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-CC-SCTT-SSTTH-----HHH-----H
T ss_pred HHHHHHHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-cccc-cCCcH-----HHH-----H
Confidence 33444566666666 8999999875544 666788899999987644333 11 1100 01100 000 1
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCCC---Cc--------------ceecCCCCcc
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFD---PK--------------FNIVSPGADM 528 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~~---~k--------------~~vIp~G~d~ 528 (700)
...-+.+|.+++.|+...+.+.+. |. ....++.+.| ++|... .+ +.+++++...
T Consensus 161 ~~~~~~a~~~~~~se~~~~~l~~~-G~-------~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~ 232 (396)
T 3dzc_A 161 KLTAALTQYHFAPTDTSRANLLQE-NY-------NAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKL 232 (396)
T ss_dssp HHHHHTCSEEEESSHHHHHHHHHT-TC-------CGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEE
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CC-------CcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCE
Confidence 123467899999997665433221 11 0011333333 222100 00 0001122222
Q ss_pred ccc-cCCc-hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIY-FPYT-EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F-~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+. .++. ...|++..+++|+..+....++..+++.. |+++. ..+.++++ ++..++|.+++ .+...++.
T Consensus 233 vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~-g~~~~--~~~~l~~~---~~~~~~v~~~~----~lg~~~~~ 302 (396)
T 3dzc_A 233 ILVTGHRRESFGGGFERICQALITTAEQHPECQILYPV-HLNPN--VREPVNKL---LKGVSNIVLIE----PQQYLPFV 302 (396)
T ss_dssp EEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEEC-CBCHH--HHHHHHHH---TTTCTTEEEEC----CCCHHHHH
T ss_pred EEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEe-CCChH--HHHHHHHH---HcCCCCEEEeC----CCCHHHHH
Confidence 232 3232 23467889999999998776666555532 32221 12233332 34557899988 55567888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
.+|+. ||++|.+| | |+ .+|||+||+|||++ +.++..|++++| +++++++ |++++++++.+++ +|++.
T Consensus 303 ~l~~~-ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~~~l~~ai~~ll----~d~~~ 370 (396)
T 3dzc_A 303 YLMDR-AHIILTDS---G-GI-QEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-NQQQICDALSLLL----TDPQA 370 (396)
T ss_dssp HHHHH-CSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-CHHHHHHHHHHHH----HCHHH
T ss_pred HHHHh-cCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-CHHHHHHHHHHHH----cCHHH
Confidence 99986 99999998 3 43 48999999999999 788889999888 5788765 8999999999998 79999
Q ss_pred HHHHHHHH
Q 005365 686 WDKISLGG 693 (700)
Q Consensus 686 ~~~ms~~a 693 (700)
+++|++++
T Consensus 371 ~~~m~~~~ 378 (396)
T 3dzc_A 371 YQAMSQAH 378 (396)
T ss_dssp HHHHHTSC
T ss_pred HHHHhhcc
Confidence 99998754
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.4e-14 Score=151.04 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=77.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-----CCCCcccccccCCeEEEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----CKGGPAEIIVNGKSGYHI 660 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-----~~GG~~EiI~dg~~G~lv 660 (700)
+.++|++.|+.+ .. .+++. +|++|..+- ..+++|||++|+|+|+. +..+.++.+.+...|..+
T Consensus 279 ~~~~v~~~~~~~----~~---~ll~~-ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~ 346 (402)
T 3ia7_A 279 LPPNVEAHQWIP----FH---SVLAH-ARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL 346 (402)
T ss_dssp CCTTEEEESCCC----HH---HHHTT-EEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC
T ss_pred CCCcEEEecCCC----HH---HHHhh-CCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc
Confidence 567899999543 33 56665 999998852 37899999999999954 445778888888899999
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+++ ++++++++|.+++ +|++.++++++.+.+..
T Consensus 347 ~~~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 347 RPDQLEPASIREAVERLA----ADSAVRERVRRMQRDIL 381 (402)
T ss_dssp CGGGCSHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHh
Confidence 876 8999999999998 79999999988776653
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.7e-13 Score=149.00 Aligned_cols=260 Identities=13% Similarity=0.128 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHH
Q 005365 388 ETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTAD 466 (700)
Q Consensus 388 ~~f~~~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E 466 (700)
......+.+.+.+. +||+||++... ..+.+.+.+++.|||+++...+. .+ +... ..|.. ... .
T Consensus 100 ~~~~~~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs-~~~~-~~~p~-----~~~-----r 163 (403)
T 3ot5_A 100 SRVMNGINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RT-WNKY-SPFPE-----EMN-----R 163 (403)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CC-SCTT-SSTTH-----HHH-----H
T ss_pred HHHHHHHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-cccc-cCCcH-----HHH-----H
Confidence 33444566666666 99999998753 44556788899999986543332 11 0000 00100 000 1
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCC---CCc---cee---cCCCCccccccCCch
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVF---DPK---FNI---VSPGADMSIYFPYTE 536 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~---~~k---~~v---Ip~G~d~~~F~g~~~ 536 (700)
...-+.+|.+++.|+...+.+.+. |- ....++.+.| ++|.. ..+ ... .+++.-..++.++..
T Consensus 164 ~~~~~~a~~~~~~se~~~~~l~~~-Gi-------~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~~~~vlv~~~r~~ 235 (403)
T 3ot5_A 164 QLTGVMADIHFSPTKQAKENLLAE-GK-------DPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRE 235 (403)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHT-TC-------CGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCEEEEECCCCHH
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CC-------CcccEEEeCCchHHHHHhhhhhhcchHHHHhccCCCEEEEEeCccc
Confidence 123445899999997765433221 10 0011223322 22210 000 000 011111123344433
Q ss_pred h-hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcE
Q 005365 537 E-KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 615 (700)
Q Consensus 537 ~-~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDv 615 (700)
. .|++..+++++..+....++..+++..+ +++. ..+.+++. ++..++|+++| .+...++..+|+. ||+
T Consensus 236 ~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~-~~~~--~~~~l~~~---~~~~~~v~l~~----~l~~~~~~~l~~~-ad~ 304 (403)
T 3ot5_A 236 NLGEPMQGMFEAVREIVESREDTELVYPMH-LNPA--VREKAMAI---LGGHERIHLIE----PLDAIDFHNFLRK-SYL 304 (403)
T ss_dssp HHTTHHHHHHHHHHHHHHHCTTEEEEEECC-SCHH--HHHHHHHH---HTTCTTEEEEC----CCCHHHHHHHHHH-EEE
T ss_pred ccCcHHHHHHHHHHHHHHhCCCceEEEecC-CCHH--HHHHHHHH---hCCCCCEEEeC----CCCHHHHHHHHHh-cCE
Confidence 2 3678899999999987777766555432 2221 11222222 34456899999 5556789999997 999
Q ss_pred EEeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 616 FVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 616 fV~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+|.+| |...+|||+||+|+|++ +.|+..|.++.| +|+++++ |++++++++..++ .|++.+++|++++
T Consensus 305 vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~~ai~~ll----~~~~~~~~m~~~~ 372 (403)
T 3ot5_A 305 VFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLIKEALDLL----DNKESHDKMAQAA 372 (403)
T ss_dssp EEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHHHSC
T ss_pred EEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHHHHHHHHH----cCHHHHHHHHhhc
Confidence 99998 44448999999999999 788888998777 8999986 9999999999998 7999999998754
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-13 Score=145.35 Aligned_cols=95 Identities=18% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|.+ |+ ++..+ +++ .+|+||..+ -+++++|||+||+|+|+.+.++ .++.+++...|+.++
T Consensus 262 ~~~~v~~-~~----~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~ 328 (384)
T 2p6p_A 262 EVPQARV-GW----TPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALL 328 (384)
T ss_dssp HCTTSEE-EC----CCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECC
T ss_pred CCCceEE-cC----CCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecC
Confidence 3568999 94 44444 455 499999973 3569999999999999998754 677777777899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+. ++++++++|.+++ +|+++++++++.+.+..
T Consensus 329 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 329 PGEDSTEAIADSCQELQ----AKDTYARRAQDLSREIS 362 (384)
T ss_dssp TTCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 75 7999999999998 79999999988877653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-12 Score=143.13 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=76.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+.+ .. .+++. +|++|..+- ..+++|||++|+|+|+. +....++.+.+...|..++
T Consensus 295 ~~~~v~~~~~~~----~~---~ll~~-ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~ 362 (415)
T 3rsc_A 295 LPPNVEAHRWVP----HV---KVLEQ-ATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLP 362 (415)
T ss_dssp CCTTEEEESCCC----HH---HHHHH-EEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECC
T ss_pred CCCcEEEEecCC----HH---HHHhh-CCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcc
Confidence 567899999543 34 55554 999998752 36899999999999995 4455677777778899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
++ ++++++++|.+++ +|++.++++++.+.+..
T Consensus 363 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 363 GEKADGDTLLAAVGAVA----ADPALLARVEAMRGHVR 396 (415)
T ss_dssp GGGCCHHHHHHHHHHHH----TCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 76 8999999999998 89999999988776654
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-11 Score=133.99 Aligned_cols=137 Identities=12% Similarity=0.038 Sum_probs=94.4
Q ss_pred ccccCCchh-----hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChh
Q 005365 529 SIYFPYTEE-----KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 603 (700)
Q Consensus 529 ~~F~g~~~~-----~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~ 603 (700)
.+++|+... .+.+..+++++..+ +..+++.+++... +.+. +++++|++.|+ ++..
T Consensus 271 ~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-----~~l~------~~~~~v~~~~~----~~~~ 330 (441)
T 2yjn_A 271 CLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQL-----EGVA------NIPDNVRTVGF----VPMH 330 (441)
T ss_dssp EEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTT-----SSCS------SCCSSEEECCS----CCHH
T ss_pred EEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcch-----hhhc------cCCCCEEEecC----CCHH
Confidence 345566654 36677777777543 3445544433211 1111 35678999994 4444
Q ss_pred HHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEECCC--CHHHHHHHHHHHHH
Q 005365 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFE 677 (700)
Q Consensus 604 el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~ 677 (700)
++ +. ++|++|.. +-+.+++|||++|+|+|+...++ .++.+++...|+.+++. ++++++++|.+++
T Consensus 331 ~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll- 401 (441)
T 2yjn_A 331 AL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVL- 401 (441)
T ss_dssp HH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHH-
T ss_pred HH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHh-
Confidence 44 45 59999985 34579999999999999998744 56777777789999876 8999999999998
Q ss_pred hccCCHHHHHHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ar~ra 697 (700)
+|+++++++++.+.+..
T Consensus 402 ---~~~~~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 402 ---DDPAHRAGAARMRDDML 418 (441)
T ss_dssp ---HCHHHHHHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHHH
Confidence 79999999988776653
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=123.65 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=67.5
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.+++++.+.+ +++..+++ . .+|+||.- +-.++++|||++|+|+|+....+ .++.+++...|..+
T Consensus 285 ~~~~~v~~~~----~~p~~~lL---~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l 352 (400)
T 4amg_A 285 ELPANVRVVE----WIPLGALL---E-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA 352 (400)
T ss_dssp CCCTTEEEEC----CCCHHHHH---T-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ecCHHHHh---h-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc
Confidence 4678899998 55555554 4 49999875 34579999999999999965544 55666666678888
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
++. +.++++|.+++ +||+++++..+-+.+
T Consensus 353 ~~~--~~~~~al~~lL----~d~~~r~~a~~l~~~ 381 (400)
T 4amg_A 353 EAG--SLGAEQCRRLL----DDAGLREAALRVRQE 381 (400)
T ss_dssp CTT--TCSHHHHHHHH----HCHHHHHHHHHHHHH
T ss_pred CCC--CchHHHHHHHH----cCHHHHHHHHHHHHH
Confidence 754 45678899988 799988776655443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.1e-10 Score=122.11 Aligned_cols=247 Identities=13% Similarity=0.101 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH
Q 005365 389 TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 389 ~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
.....+.+.+.+. +||+|+++.......+.+.|++.|||+++...++ .. .+..+.. ... ...
T Consensus 81 ~~~~~l~~~l~~~---kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs----~~~~~pe-----e~n-----R~~ 142 (385)
T 4hwg_A 81 LVIEKVDEVLEKE---KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC----FDQRVPE-----EIN-----RKI 142 (385)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC----SCTTSTH-----HHH-----HHH
T ss_pred HHHHHHHHHHHhc---CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc----ccccCcH-----HHH-----HHH
Confidence 3444556666666 8999999775433334778889999976544333 11 0001100 000 112
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCCC--------C----cceecCCCCcccc-ccCC
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFD--------P----KFNIVSPGADMSI-YFPY 534 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~~--------~----k~~vIp~G~d~~~-F~g~ 534 (700)
.-+.+|.+++.|+...+.+.+. |.-+ ..++.+-| ++|... . ++. ++++ ...+ ..++
T Consensus 143 ~~~~a~~~~~~te~~~~~l~~~-G~~~-------~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lg-l~~~-~~iLvt~hr 212 (385)
T 4hwg_A 143 IDHISDVNITLTEHARRYLIAE-GLPA-------ELTFKSGSHMPEVLDRFMPKILKSDILDKLS-LTPK-QYFLISSHR 212 (385)
T ss_dssp HHHHCSEEEESSHHHHHHHHHT-TCCG-------GGEEECCCSHHHHHHHHHHHHHHCCHHHHTT-CCTT-SEEEEEECC
T ss_pred HHhhhceeecCCHHHHHHHHHc-CCCc-------CcEEEECCchHHHHHHhhhhcchhHHHHHcC-CCcC-CEEEEEeCC
Confidence 2356899999997665432221 1000 01222222 112000 0 001 1111 1222 2233
Q ss_pred ch---hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-C-C--CCcEEEeccccCcCChhHHHH
Q 005365 535 TE---EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-K-L--NGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 535 ~~---~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~-L--~~~V~flG~~~d~v~~~el~~ 607 (700)
.+ ..|++..+++++..+.... +..+++.. + . ..++.++++ + + .++|.+++ .+...++..
T Consensus 213 ~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~-~-p-------~~~~~l~~~~~~~~~~~~v~l~~----~lg~~~~~~ 278 (385)
T 4hwg_A 213 EENVDVKNNLKELLNSLQMLIKEY-NFLIIFST-H-P-------RTKKRLEDLEGFKELGDKIRFLP----AFSFTDYVK 278 (385)
T ss_dssp C-----CHHHHHHHHHHHHHHHHH-CCEEEEEE-C-H-------HHHHHHHTSGGGGGTGGGEEECC----CCCHHHHHH
T ss_pred chhcCcHHHHHHHHHHHHHHHhcC-CeEEEEEC-C-h-------HHHHHHHHHHHHhcCCCCEEEEc----CCCHHHHHH
Confidence 22 3367888999999887543 34333322 2 2 133444444 3 2 36799987 555678888
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYW 686 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~ 686 (700)
+++. ||+++.+| |.+..||+++|+|+|+.... +.+|.++.| ++.++++ |++++++++..++ +|+..+
T Consensus 279 l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d~~~i~~ai~~ll----~d~~~~ 346 (385)
T 4hwg_A 279 LQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-KAERVLQAVKTIT----EEHDNN 346 (385)
T ss_dssp HHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-SHHHHHHHHHHHH----TTCBTT
T ss_pred HHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-CHHHHHHHHHHHH----hChHHH
Confidence 8886 99999887 55789999999999998554 367888776 6788764 8999999999998 666554
Q ss_pred HHH
Q 005365 687 DKI 689 (700)
Q Consensus 687 ~~m 689 (700)
++|
T Consensus 347 ~~m 349 (385)
T 4hwg_A 347 KRT 349 (385)
T ss_dssp BCC
T ss_pred HHh
Confidence 443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-09 Score=115.07 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=69.3
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg~~G~lv 660 (700)
+..++|++.| +++..+++ . .+|++|..+- ..++.|||++|+|+|+...++- .+.+++...|..+
T Consensus 265 ~~~~~v~~~~----~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l 332 (404)
T 3h4t_A 265 DEGDDCLVVG----EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH 332 (404)
T ss_dssp SCCTTEEEES----SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEec----CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc
Confidence 3467899998 44455544 4 5999998742 2789999999999999866543 3445556678888
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++. ++++++++|.+++ + |++++++++.+.
T Consensus 333 ~~~~~~~~~l~~ai~~ll----~-~~~~~~~~~~~~ 363 (404)
T 3h4t_A 333 DGPTPTVESLSAALATAL----T-PGIRARAAAVAG 363 (404)
T ss_dssp SSSSCCHHHHHHHHHHHT----S-HHHHHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHHh----C-HHHHHHHHHHHH
Confidence 754 7899999999997 6 888887776543
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.5e-09 Score=113.98 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=73.8
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+. +.. .+++. +|+||..+ -.++++|||++|+|+|+....+ ..+.+.+...|+.++
T Consensus 303 ~~~~v~~~~~~----~~~---~~l~~-~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~ 370 (424)
T 2iya_A 303 VPPNVEVHQWV----PQL---DILTK-ASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIP 370 (424)
T ss_dssp CCTTEEEESSC----CHH---HHHTT-CSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC
T ss_pred CCCCeEEecCC----CHH---HHHhh-CCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcC
Confidence 56789999944 333 45665 99999863 2479999999999999997643 455666667899987
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+. ++++++++|.+++ +|+++++++++.+.+.
T Consensus 371 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 371 RDQVTAEKLREAVLAVA----SDPGVAERLAAVRQEI 403 (424)
T ss_dssp GGGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHH
Confidence 65 8899999999998 7998888887766553
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.8e-09 Score=120.08 Aligned_cols=154 Identities=8% Similarity=-0.032 Sum_probs=115.2
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEE--EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL--KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGEL 605 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i--~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el 605 (700)
..+|.......|....+++++.+++...|+..+.+ .|.+.+.....+ +.+.+.|++++|.|+| .++..+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~----~~~~~~GI~~Rv~F~g----~~p~~e~ 512 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYV----ERFIKSYLGDSATAHP----HSPYHQY 512 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHH----HHHHHHHHGGGEEEEC----CCCHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHH----HHHHHcCCCccEEEcC----CCCHHHH
Confidence 34555555667889999999999998888765543 343344433222 3345678888999999 6667888
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc------cCCeEE-EECCCCHHHHHHHHHHHHHh
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV------NGKSGY-HIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~------dg~~G~-lv~p~D~eaLAeaI~~ll~~ 678 (700)
...++. +|+|+-|+.+.+ |+|.+|||+||+|||+...+++..-+. -|..++ +.+ |.++.+++..++.
T Consensus 513 la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~--d~eeYv~~Av~La-- 586 (631)
T 3q3e_A 513 LRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN--TVDEYVERAVRLA-- 586 (631)
T ss_dssp HHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES--SHHHHHHHHHHHH--
T ss_pred HHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC--CHHHHHHHHHHHh--
Confidence 888886 999999997755 999999999999999977666655542 244443 333 7899999998887
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra 697 (700)
.|++.+++++++.+++.
T Consensus 587 --~D~~~l~~LR~~Lr~~~ 603 (631)
T 3q3e_A 587 --ENHQERLELRRYIIENN 603 (631)
T ss_dssp --HCHHHHHHHHHHHHHSC
T ss_pred --CCHHHHHHHHHHHHHHh
Confidence 89999999999988763
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.4e-08 Score=106.51 Aligned_cols=93 Identities=14% Similarity=-0.010 Sum_probs=70.4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|++.| +++..++ +. ++|+||..+ -.++++|||++|+|+|+....+ ..+.+++...|..++
T Consensus 283 ~~~~v~~~~----~~~~~~~---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~ 350 (415)
T 1iir_A 283 DGADCFAIG----EVNHQVL---FG-RVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD 350 (415)
T ss_dssp CGGGEEECS----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS
T ss_pred CCCCEEEeC----cCChHHH---Hh-hCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCC
Confidence 456799988 4455555 45 599999863 2379999999999999987655 566677777899887
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+. ++++++++|.++ .|+++++++++.+.+
T Consensus 351 ~~~~~~~~l~~~i~~l-----~~~~~~~~~~~~~~~ 381 (415)
T 1iir_A 351 GPIPTFDSLSAALATA-----LTPETHARATAVAGT 381 (415)
T ss_dssp SSSCCHHHHHHHHHHH-----TSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH-----cCHHHHHHHHHHHHH
Confidence 54 788898888776 578888887776543
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-07 Score=102.54 Aligned_cols=92 Identities=15% Similarity=0.026 Sum_probs=68.5
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.+++++++.+ +++..++ +. ++|+||.- +-..++.|||++|+|+|+....+ .++.+++...|..+
T Consensus 283 ~~~~~v~~~~----~~~~~~l---l~-~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~ 350 (416)
T 1rrv_A 283 DDRDDCFAID----EVNFQAL---FR-RVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (416)
T ss_dssp CCCTTEEEES----SCCHHHH---GG-GSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred CCCCCEEEec----cCChHHH---hc-cCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC
Confidence 3567899998 4444554 45 59999985 23469999999999999976544 55566666789888
Q ss_pred CC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 661 DP--YHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 661 ~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+. .++++++++|.++ .|+++++++++.+
T Consensus 351 ~~~~~~~~~l~~~i~~l-----~~~~~~~~~~~~~ 380 (416)
T 1rrv_A 351 DGPTPTFESLSAALTTV-----LAPETRARAEAVA 380 (416)
T ss_dssp SSSCCCHHHHHHHHHHH-----TSHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHh-----hCHHHHHHHHHHH
Confidence 65 4788888888776 5888888877654
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.1e-08 Score=97.75 Aligned_cols=130 Identities=13% Similarity=0.116 Sum_probs=90.9
Q ss_pred cccCCch---hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 530 IYFPYTE---EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 530 ~F~g~~~---~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
+++|+.. +.|.+..+++++..+ +..+++++++...+ +++++|++.| +++..++.
T Consensus 26 v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~--------------~~~~~v~~~~----~~~~~~~l 82 (170)
T 2o6l_A 26 FSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD--------------TLGLNTRLYK----WIPQNDLL 82 (170)
T ss_dssp EECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT--------------TCCTTEEEES----SCCHHHHH
T ss_pred EECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc--------------cCCCcEEEec----CCCHHHHh
Confidence 4455553 456666666666432 24455555443210 3567899999 44455655
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEECCC--CHHHHHHHHHHHHHhcc
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCK 680 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~~ 680 (700)
.+ + .+|++|.. +-+.+++|||++|+|+|+.... +.++.+++...|+.+++. ++++++++|.+++
T Consensus 83 ~~-~-~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll---- 152 (170)
T 2o6l_A 83 GH-P-KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVI---- 152 (170)
T ss_dssp TS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH----
T ss_pred cC-C-CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHH----
Confidence 33 5 49999986 3468999999999999999764 456777788899999877 8899999999998
Q ss_pred CCHHHHHHHHHH
Q 005365 681 ADPSYWDKISLG 692 (700)
Q Consensus 681 ~dp~~~~~ms~~ 692 (700)
.|+++++++.+-
T Consensus 153 ~~~~~~~~a~~~ 164 (170)
T 2o6l_A 153 NDPSYKENVMKL 164 (170)
T ss_dssp HCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 788766665543
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.8e-08 Score=112.60 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=101.6
Q ss_pred CccccccCCchhhhchhh-HHHHHHHHhh--cC-----CCccEEEEecCChhhHHH---HHHHHHHHH----HcCCCC--
Q 005365 526 ADMSIYFPYTEEKRRLKS-FHPEIEELLY--SD-----VENKEHLKESKDLEEQAE---MKKMYSLID----QYKLNG-- 588 (700)
Q Consensus 526 ~d~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~--~~-----~~~~l~i~g~Gd~ee~~~---~~~l~~li~----~l~L~~-- 588 (700)
+..+.++.|+...||... ++..+..+.. .. ....+++.|.++...... ++.+.++++ +-..++
T Consensus 516 ~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~l 595 (796)
T 2c4m_A 516 SIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLL 595 (796)
T ss_dssp SEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTE
T ss_pred CcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCce
Confidence 334557788899999998 7888777764 22 235667777766544322 233444433 124567
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC--
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP-- 662 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p-- 662 (700)
+|.|+. + -+..+.+.+..+||++.+||+ +|++|++-+=||..|++.|+|-.|...|+.++ .+|||+|..
T Consensus 596 KVvFl~---n--Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~ 670 (796)
T 2c4m_A 596 KVVFVE---N--YNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARV 670 (796)
T ss_dssp EEEEET---T--CCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCT
T ss_pred EEEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCch
Confidence 788885 2 245677777667999999999 99999999999999999999999999998765 469999987
Q ss_pred CCHHHHHH
Q 005365 663 YHGEQAAE 670 (700)
Q Consensus 663 ~D~eaLAe 670 (700)
.++.++-.
T Consensus 671 ~ev~~l~~ 678 (796)
T 2c4m_A 671 EELPALRE 678 (796)
T ss_dssp TTHHHHHH
T ss_pred hhHHHHHH
Confidence 67766654
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.6e-07 Score=106.00 Aligned_cols=139 Identities=13% Similarity=0.011 Sum_probs=100.7
Q ss_pred CCccccccCCchhhhchhh-HHHHHHHHhh---cC----CCccEEEEecCChhhHHH---HHHHHHHHH----HcCCCC-
Q 005365 525 GADMSIYFPYTEEKRRLKS-FHPEIEELLY---SD----VENKEHLKESKDLEEQAE---MKKMYSLID----QYKLNG- 588 (700)
Q Consensus 525 G~d~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~---~~----~~~~l~i~g~Gd~ee~~~---~~~l~~li~----~l~L~~- 588 (700)
.+..+.++.|+...||... ++..+..+.. .+ ....+++.|.++...... ++.+.++++ +-..++
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~ 604 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDK 604 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 3345567788899999998 7777776654 21 235666777766544222 233344433 124567
Q ss_pred -cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECCC
Q 005365 589 -QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDPY 663 (700)
Q Consensus 589 -~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p~ 663 (700)
+|.|+. + -+..+.+.+..+||++.+||+ +|++|++-+=||..|++.|+|-.|...|+.++ .+|||+|..
T Consensus 605 lKVvfl~---n--Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~- 678 (796)
T 1l5w_A 605 LKVVFLP---D--YCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH- 678 (796)
T ss_dssp EEEEECS---S--CCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC-
T ss_pred eEEEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecC-
Confidence 788875 2 245677777667999999999 99999999999999999999999999998765 469999987
Q ss_pred CHHHHH
Q 005365 664 HGEQAA 669 (700)
Q Consensus 664 D~eaLA 669 (700)
+++++.
T Consensus 679 ~~~ev~ 684 (796)
T 1l5w_A 679 TVEQVK 684 (796)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 777765
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.66 E-value=7.4e-07 Score=103.77 Aligned_cols=136 Identities=13% Similarity=0.016 Sum_probs=98.3
Q ss_pred ccccccCCchhhhchhhH-HHHHHHHh---hcCC----CccEEEEecCChhhHH---HHHHHHHHHHHcC----CCC--c
Q 005365 527 DMSIYFPYTEEKRRLKSF-HPEIEELL---YSDV----ENKEHLKESKDLEEQA---EMKKMYSLIDQYK----LNG--Q 589 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~L-l~Ai~~Ll---~~~~----~~~l~i~g~Gd~ee~~---~~~~l~~li~~l~----L~~--~ 589 (700)
..+.|+.|+...||...+ +..+..+. ..+. ...+++.|.++..... .++.+.++++.++ +++ +
T Consensus 551 l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lK 630 (824)
T 2gj4_A 551 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLR 630 (824)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEE
T ss_pred ceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceE
Confidence 344567788889999887 77777664 2221 2367777776654422 2344555555443 356 7
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccc--cCCeEEEECCCCH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPYHG 665 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~--dg~~G~lv~p~D~ 665 (700)
|.|+. + -+..+.+.+..++|++.+||+ +|++|++-+=||..|++.|+|-.|...|+.+ .++|||+|... +
T Consensus 631 VvFl~---n--YdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~ 704 (824)
T 2gj4_A 631 VIFLE---N--YRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-V 704 (824)
T ss_dssp EEEET---T--CCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-H
T ss_pred EEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-H
Confidence 88885 2 245677777667999999999 9999999999999999999999999888875 45699999864 5
Q ss_pred HHH
Q 005365 666 EQA 668 (700)
Q Consensus 666 eaL 668 (700)
+++
T Consensus 705 ~ev 707 (824)
T 2gj4_A 705 EDV 707 (824)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0013 Score=73.38 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=63.3
Q ss_pred CCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccc-cCCeEEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~-dg~~G~lv 660 (700)
++++...+ +++..+ +++. ++++||.= +=.++++||+++|+|+|+-...+ .+..+. +-..|..+
T Consensus 352 ~~~~~v~~----~~pq~~---~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 420 (482)
T 2pq6_A 352 ADRGLIAS----WCPQDK---VLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 420 (482)
T ss_dssp TTTEEEES----CCCHHH---HHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEe----ecCHHH---HhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEE
Confidence 46788887 444444 4532 13346664 23469999999999999975543 334343 44578877
Q ss_pred CC-CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 661 DP-YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 661 ~p-~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+. -++++++++|.+++ .|++ .++|+++|++..
T Consensus 421 ~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 421 DTNVKREELAKLINEVI----AGDK-GKKMKQKAMELK 453 (482)
T ss_dssp CSSCCHHHHHHHHHHHH----TSHH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----cCCc-HHHHHHHHHHHH
Confidence 62 37899999999998 7886 356666665543
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0025 Score=70.61 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=62.9
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccC-CeEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNG-KSGYH 659 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg-~~G~l 659 (700)
.+++...+ +++..++.. .++ +||.= +=-++++||+++|+|+|+-...+ .+..+++. ..|..
T Consensus 326 ~~~~~vv~----w~Pq~~vL~----h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~ 393 (454)
T 3hbf_A 326 KTKGKIVA----WAPQVEILK----HSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVG 393 (454)
T ss_dssp TTTEEEES----SCCHHHHHH----STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEE
T ss_pred CCceEEEe----eCCHHHHHh----hcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEE
Confidence 46788888 555555544 477 66654 12368999999999999975433 34455553 67888
Q ss_pred ECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
++. -+.++++++|.+++ .|+ ..++|+++|++.
T Consensus 394 l~~~~~~~~~l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 394 VDNGVLTKESIKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp CGGGSCCHHHHHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 764 47899999999998 664 234555555443
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0013 Score=72.85 Aligned_cols=94 Identities=12% Similarity=0.044 Sum_probs=64.1
Q ss_pred CCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccC-CeEEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNG-KSGYHI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg-~~G~lv 660 (700)
.+++...+ +++.. .+++. ++|+||.= +=.++++||+++|+|+|+-... ..+..+.+. ..|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 35788887 44443 44552 26777774 2356999999999999997543 234455555 678887
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+.+ +.++++++|.+++ .|++ .++|++++++.
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRAL 425 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHH
Confidence 643 6899999999998 6775 45666666554
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0039 Score=69.14 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=52.6
Q ss_pred CcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccc-cccCCeEEEE-
Q 005365 588 GQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEI-IVNGKSGYHI- 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~Ei-I~dg~~G~lv- 660 (700)
+++...+ +++..+ .++. ++|+||.= +=.++++||+++|+|+|+-...+ .+.. ++.-..|..+
T Consensus 332 ~~~~v~~----w~pq~~---vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~ 400 (463)
T 2acv_A 332 GKGMICG----WAPQVE---VLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400 (463)
T ss_dssp CSEEEES----SCCHHH---HHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCEEEEc----cCCHHH---HhCCCccCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence 4566666 443333 3431 36777764 23479999999999999975533 3444 4565688888
Q ss_pred C---C----CCHHHHHHHHHHHH
Q 005365 661 D---P----YHGEQAAEILVDFF 676 (700)
Q Consensus 661 ~---p----~D~eaLAeaI~~ll 676 (700)
+ . -+.++++++|.+++
T Consensus 401 ~~~~~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 401 VDYRKGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHT
T ss_pred cccCCCCccccHHHHHHHHHHHH
Confidence 2 2 37899999999997
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0039 Score=69.55 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=38.9
Q ss_pred cHHHHHHHHcCCCEEEcCCCC----ccccc-ccCCeEEEECCC-----CHHHHHHHHHHHH
Q 005365 626 GLTVVEAMTCGLPTFATCKGG----PAEII-VNGKSGYHIDPY-----HGEQAAEILVDFF 676 (700)
Q Consensus 626 Gl~vlEAMA~GlPVVAT~~GG----~~EiI-~dg~~G~lv~p~-----D~eaLAeaI~~ll 676 (700)
-++++||+++|+|+|+-...+ .+..+ +.-..|..++.. +.++++++|.+++
T Consensus 367 ~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl 427 (480)
T 2vch_A 367 WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLM 427 (480)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHh
Confidence 368999999999999975433 34443 455678777643 7899999999998
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0048 Score=72.35 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=109.3
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~~ 607 (700)
.+|.-.....|=-...+....+++...|+..+++...+... .+.+++.+++.|++ ++|.|.+ +.+..+...
T Consensus 524 v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----~~~l~~~~~~~gi~~~r~~f~~----~~~~~~~l~ 595 (723)
T 4gyw_A 524 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----EPNIQQYAQNMGLPQNRIIFSP----VAPKEEHVR 595 (723)
T ss_dssp EEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----HHHHHHHHHHTTCCGGGEEEEE----CCCHHHHHH
T ss_pred EEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHHHHHHHhcCCCcCeEEECC----CCCHHHHHH
Confidence 45544445567667788888999999999988887654332 24677788888884 7899999 566788888
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc-----c-CCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV-----N-GKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~-----d-g~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
.+.. +|+++=|--| +-|.|..||+.||+|||+-....+..-+. . |-.-+++ .|.++..+.-.++. .
T Consensus 596 ~~~~-~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~~~~~Y~~~a~~la----~ 667 (723)
T 4gyw_A 596 RGQL-ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA--KNRQEYEDIAVKLG----T 667 (723)
T ss_dssp HGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--SSHHHHHHHHHHHH----H
T ss_pred HhCC-CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc--CCHHHHHHHHHHHh----c
Confidence 8886 9999988655 44789999999999999964322222111 0 1111222 37788888777776 7
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
|++.+.+++++-+++..
T Consensus 668 d~~~l~~lr~~l~~~~~ 684 (723)
T 4gyw_A 668 DLEYLKKVRGKVWKQRI 684 (723)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999998887776654
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.01 Score=62.40 Aligned_cols=89 Identities=15% Similarity=0.087 Sum_probs=53.8
Q ss_pred hhhchh--hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC--C-CCcEEEeccccCcCChhHHHHHHHc
Q 005365 537 EKRRLK--SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK--L-NGQFRWISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 537 ~~Kgl~--~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~--L-~~~V~flG~~~d~v~~~el~~~la~ 611 (700)
+.|+.. .+.+.++.|... +..+++.|++ .+.+..+ ++.+..+ . .+.+.+.| ..+..++..+++.
T Consensus 193 ~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~--~e~~~~~---~i~~~~~~~~~~~~~~l~g----~~sl~e~~ali~~ 261 (348)
T 1psw_A 193 PAKRWPHYHYAELAKQLIDE--GYQVVLFGSA--KDHEAGN---EILAALNTEQQAWCRNLAG----ETQLDQAVILIAA 261 (348)
T ss_dssp GGGSCCHHHHHHHHHHHHHT--TCEEEECCCG--GGHHHHH---HHHTTSCHHHHTTEEECTT----TSCHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHC--CCeEEEEeCh--hhHHHHH---HHHHhhhhccccceEeccC----cCCHHHHHHHHHh
Confidence 445544 666777766653 4556665433 3322222 2222221 0 12345667 5668999999997
Q ss_pred cCcEEEeCCCCCCccHHHHHHHHcCCCEEEc
Q 005365 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
+|++|... .|..-+ |.|+|+|+|+-
T Consensus 262 -a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 262 -CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp -SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred -CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 99999974 244334 99999999993
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.044 Score=56.62 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC
Q 005365 575 KKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 643 (700)
Q Consensus 575 ~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~ 643 (700)
+++++.+++. .++++.++.+ ++..+|+. ||+.|.+ -|.|+.|++++|+|.|.-.
T Consensus 198 ~~l~~~~~~~---~~v~v~~~~~------~m~~~m~~-aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 198 KKLQKFAKLH---NNIRLFIDHE------NIAKLMNE-SNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp HHHHHHHHTC---SSEEEEESCS------CHHHHHHT-EEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhhC---CCEEEEeCHH------HHHHHHHH-CCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 4555555432 3699998654 46788886 9999995 3689999999999999864
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.061 Score=57.12 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=53.0
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
+.+.+.++.+... +..+++.|+. .+.+ ...++++..+ ...+.+.| ..+..|+..+++. +|++|..
T Consensus 204 ~~~~~l~~~l~~~--g~~vvl~g~~--~e~~---~~~~i~~~~~-~~~~~l~g----~~sl~e~~ali~~-a~~~i~~-- 268 (349)
T 3tov_A 204 ERFAHVADYFGRL--GYKTVFFGGP--MDLE---MVQPVVEQME-TKPIVATG----KFQLGPLAAAMNR-CNLLITN-- 268 (349)
T ss_dssp HHHHHHHHHHHHH--TCEEEECCCT--TTHH---HHHHHHHTCS-SCCEECTT----CCCHHHHHHHHHT-CSEEEEE--
T ss_pred HHHHHHHHHHHhC--CCeEEEEeCc--chHH---HHHHHHHhcc-cccEEeeC----CCCHHHHHHHHHh-CCEEEEC--
Confidence 3556666666544 4556665543 2222 2334444443 23366667 6678999999997 9999997
Q ss_pred CCCccHHHHHHHHcCCCEEEc
Q 005365 622 YEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT 642 (700)
+ .|..-+ |.|+|+|+|+-
T Consensus 269 -D-sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 269 -D-SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp -S-SHHHHH-HHTTTCCEEEE
T ss_pred -C-CCHHHH-HHhcCCCEEEE
Confidence 2 255555 89999999994
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=1.7 Score=44.86 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=49.7
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
.+.+.++.|... +..+++.+++ ..+. +...++.+. .+ .+.+.| ..+..|+..+++. ||++|..
T Consensus 198 ~~~~l~~~L~~~--~~~vvl~~g~-~~e~---~~~~~i~~~--~~-~~~l~g----~~sl~el~ali~~-a~l~I~~--- 260 (326)
T 2gt1_A 198 HWRELIGLLADS--GIRIKLPWGA-PHEE---ERAKRLAEG--FA-YVEVLP----KMSLEGVARVLAG-AKFVVSV--- 260 (326)
T ss_dssp HHHHHHHHTTTT--CCEEEECCSS-HHHH---HHHHHHHTT--CT-TEEECC----CCCHHHHHHHHHT-CSEEEEE---
T ss_pred HHHHHHHHHHHC--CCcEEEecCC-HHHH---HHHHHHHhh--CC-cccccC----CCCHHHHHHHHHh-CCEEEec---
Confidence 555666665432 4445554333 3222 222333322 22 367777 6678999999997 9999998
Q ss_pred CCccHHHHHHHHcCCCEEEc
Q 005365 623 EAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVAT 642 (700)
++ |..-+ |.|+|+|+|+-
T Consensus 261 DS-G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 261 DT-GLSHL-TAALDRPNITV 278 (326)
T ss_dssp SS-HHHHH-HHHTTCCEEEE
T ss_pred CC-cHHHH-HHHcCCCEEEE
Confidence 22 55555 77799999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 700 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-10 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-07 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 7e-06 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 2e-04 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 61.4 bits (147), Expect = 1e-10
Identities = 55/411 (13%), Positives = 114/411 (27%), Gaps = 24/411 (5%)
Query: 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDIT--------PQILIITRLLPDAVGTTCGQR 350
GG + AL G ++ Q I ++
Sbjct: 15 VGGLAEALTAISEAL--------ASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVS 66
Query: 351 LEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLII 410
E+ + I +E W + + ++ +E + PD++
Sbjct: 67 YEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVH 125
Query: 411 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470
+ +L+ + H L K+K P + L + + +
Sbjct: 126 FHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP-DIDPEHTGG 184
Query: 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI 530
D + T + + +E + G+ +
Sbjct: 185 YIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKF 244
Query: 531 YFPYTEEKRRLKSFHPEIE--ELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNG 588
+ F + ++L +E KE +++ K L +
Sbjct: 245 GMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLE 304
Query: 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 648
+ + + + E R + + + P+ +E FGL +EAM G A+ GG
Sbjct: 305 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR 364
Query: 649 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
+II ++G + + A ++ E S K KR
Sbjct: 365 DII-TNETGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMS 411
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 52.0 bits (123), Expect = 1e-07
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS---------GYHIDPYHGE 666
+ P+ +E GLT + A+ G GG A+ +++ G P +
Sbjct: 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLD 428
Query: 667 QAAEILVDFFEKCKADPSYWDKISLGGLKR 696
+ + DP W ++ G+K
Sbjct: 429 GLKQAIRRTVR-YYHDPKLWTQMQKLGMKS 457
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 46.4 bits (109), Expect = 7e-06
Identities = 16/167 (9%), Positives = 45/167 (26%), Gaps = 12/167 (7%)
Query: 538 KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 597
+ L+ + ++ Y+ + + + +++ I+ + +
Sbjct: 277 EALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLN 336
Query: 598 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF-----ATCKGGPAEIIV 652
L + + + L + L E + P + G A +
Sbjct: 337 QHFDRKLLMKIFRYS-DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT 395
Query: 653 NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699
+ ++PY ++ A L + L I +
Sbjct: 396 S---ALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVK 436
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 3/127 (2%)
Query: 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM 633
+++ + + S ++ + + PA EA G+ ++EA+
Sbjct: 231 FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAI 290
Query: 634 TCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693
T GLP T G A I + G I ++ L + K +
Sbjct: 291 TAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQ---LNEVLRKALTQSPLRMAWAENA 347
Query: 694 LKRIEEK 700
+ +
Sbjct: 348 RHYADTQ 354
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 700 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.85 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.84 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.84 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.19 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.97 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.91 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.79 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.16 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.04 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.96 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.65 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.42 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.38 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.35 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 95.82 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 95.7 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.53 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 90.99 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 87.16 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 85.95 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=2.5e-34 Score=312.95 Aligned_cols=378 Identities=16% Similarity=0.117 Sum_probs=244.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCC------ccc
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC------GQR 350 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~------~~~ 350 (700)
|||+++|..++|. .+||++.|+. .|+++|+++||+|+ |+|+..+....... ...
T Consensus 1 MkIl~~~~~~pP~--------~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~~~~~~~~~ 60 (437)
T d2bisa1 1 MKVLLLGFEFLPV--------KVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGEE 60 (437)
T ss_dssp CEEEEECSCCTTC--------CSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEEEEECSSSE
T ss_pred CEEEEECCccCCc--------ccCCHHHHHH--------HHHHHHHHcCCEEE----EEecCCCccchhhccceeecccc
Confidence 8999999876532 2699999999 66777899999999 99975433211000 000
Q ss_pred e---eEecCccceEEEEecCCCcc--c-ccccccccccchhhHHHHHHHHHHHHHHHc--CCCCeEEEEcCCCchHHHHH
Q 005365 351 L---EKVYGTKYSDILRVPFRTEK--G-VVRKWISRFEVWPYLETYTEDVAVEIAKEL--QGKPDLIIGNYSDGNIVASL 422 (700)
Q Consensus 351 ~---e~i~~~~~v~I~rvp~~~~~--~-~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~--~~~pDlIh~h~~~~~lva~l 422 (700)
. .......++.++++...... . +.+.| ...+.....|.......+.... ...|||||+|++..++++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~ 137 (437)
T d2bisa1 61 VQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGAL 137 (437)
T ss_dssp EEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHH
T ss_pred cceeeeeeccCCeEEEecCccccccccccccch---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhh
Confidence 0 00111124455554432110 0 00000 0011111222222222222221 34689999999999999999
Q ss_pred HHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccC
Q 005365 423 LAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTL 502 (700)
Q Consensus 423 la~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~ 502 (700)
+++..++|+|++.|+................ ...........+......+|.+++.+..........+... .
T Consensus 138 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~-------~ 209 (437)
T d2bisa1 138 IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGL-SELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNF-------E 209 (437)
T ss_dssp HHHHHCCCEEEEESSCCCCCEEHHHHHHTTC-GGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGG-------T
T ss_pred hhccccCceeEEEeeccccccchhhhhhccc-hhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccc-------c
Confidence 9999999999999998654322111111111 0111111223466778889999999987665333333222 1
Q ss_pred CCeEEeecCCCCCCCcceecC----------------CCCccccccCCch-hhhchhhHHHHHHHHhhcC--CCccEEEE
Q 005365 503 PGLYRVVHGIDVFDPKFNIVS----------------PGADMSIYFPYTE-EKRRLKSFHPEIEELLYSD--VENKEHLK 563 (700)
Q Consensus 503 p~l~~v~nGId~~~~k~~vIp----------------~G~d~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll~~~--~~~~l~i~ 563 (700)
..+.+++||++.....-...+ .+....+|+|+.. ..||+..+++|+..+.... ++.+++++
T Consensus 210 ~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~ 289 (437)
T d2bisa1 210 GKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII 289 (437)
T ss_dssp TTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE
T ss_pred CceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhcccccccccccceeeee
Confidence 236777888874211111111 1223567889975 4799999999999886543 45667777
Q ss_pred ecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC
Q 005365 564 ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 643 (700)
Q Consensus 564 g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~ 643 (700)
|.|+.... ..++.+.+ ...+.+.+.| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+|+
T Consensus 290 G~~~~~~~---~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~-adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~ 359 (437)
T d2bisa1 290 GKGDPELE---GWARSLEE--KHGNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASA 359 (437)
T ss_dssp CCBCHHHH---HHHHHHHH--TCTTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCHHHHHHHTTTCEEEEES
T ss_pred cccccccc---cchhhhcc--ccccceeccc----cCcHHHHHHHHhh-hccccccccccccchHHHHHHHCCCCEEEeC
Confidence 77655432 22233332 3456666766 5667889998886 9999999999999999999999999999999
Q ss_pred CCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 644 KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 644 ~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.||..|+|++ .+|++++++|++++|++|.++++ .|++.+++|+++|++.+++
T Consensus 360 ~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~~ 411 (437)
T d2bisa1 360 VGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSRSDLSKFRENCKKRAMS 411 (437)
T ss_dssp CTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHT---TTTSCTHHHHHHHHHHHHH
T ss_pred CCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHh
Confidence 9999999976 58999999999999999999882 5888999999999988753
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=8.2e-35 Score=324.08 Aligned_cols=387 Identities=13% Similarity=0.149 Sum_probs=239.4
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCC--C---------
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVG--T--------- 345 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~--~--------- 345 (700)
|||++||..++|- -.+||...++. .|+++|+++||+|+ |+|+.++.-.. +
T Consensus 1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~~~~~~~~~~~~ 61 (477)
T d1rzua_ 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAAVTDPVKCFEFT 61 (477)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHHCCSCEEEEEES
T ss_pred CEEEEEEEeeecc-------cccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcchhhhcccceEEEEEe
Confidence 8999999887752 13699888888 56777899999999 99865321000 0
Q ss_pred -CCccceeEec-CccceEEEEecCCC----ccc-cccccc-ccccchhhHHHHHHHHHHHHHHHc-CCCCeEEEEcCCCc
Q 005365 346 -TCGQRLEKVY-GTKYSDILRVPFRT----EKG-VVRKWI-SRFEVWPYLETYTEDVAVEIAKEL-QGKPDLIIGNYSDG 416 (700)
Q Consensus 346 -~~~~~~e~i~-~~~~v~I~rvp~~~----~~~-~~~~~l-sr~~i~~~l~~f~~~~~~~l~~~~-~~~pDlIh~h~~~~ 416 (700)
......+... ..+++.++.+.... ..+ +...+. .....+.....+...+.+.+.... ..+|||||+|.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~ 141 (477)
T d1rzua_ 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA 141 (477)
T ss_dssp CSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH
T ss_pred ccCCceEEEEEEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhH
Confidence 0000000000 00122222221100 000 111100 001112222233333343333322 24899999998776
Q ss_pred hHHHHHH--HHhcCCcEEEEecCCccccCCCCch-hh-----hhc-ccccchhhhhhHHHHHHhhCCEEEecCHHHHHhh
Q 005365 417 NIVASLL--AHKLGVTQCTIAHALEKTKYPDSDI-YW-----KNL-DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGS 487 (700)
Q Consensus 417 ~lva~ll--a~~~giP~V~t~H~l~~~~~~~~~~-~w-----~~~-~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~ 487 (700)
.+.+..+ ++..++|+|+|.|+........... .+ ..+ ............++..+..+|.++++|....+..
T Consensus 142 ~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~ 221 (477)
T d1rzua_ 142 AMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEI 221 (477)
T ss_dssp TTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHH
Confidence 6655544 3456799999999875432111100 00 000 0000011111234567888999999997765433
Q ss_pred hhhhcccc--ccccccCCCeEEeecCCCCCC--C-cceec--------------------------CCCCccccccCCch
Q 005365 488 KDTVGQYE--SHTAFTLPGLYRVVHGIDVFD--P-KFNIV--------------------------SPGADMSIYFPYTE 536 (700)
Q Consensus 488 k~~~~~y~--~~~~~~~p~l~~v~nGId~~~--~-k~~vI--------------------------p~G~d~~~F~g~~~ 536 (700)
.....-.. ............|+||++... + +...+ .++....+|.|+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~ 301 (477)
T d1rzua_ 222 LTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLT 301 (477)
T ss_dssp TSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBS
T ss_pred HHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeee
Confidence 22111000 000111224667889987421 1 11111 22334578999999
Q ss_pred hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 537 EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
++||++.|++|++++... +.+++++|.|+.... .++.++.. ++.++|.|.| ..+.++...+++. ||+|
T Consensus 302 ~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~~~~---~~~~~~~~--~~~~~v~~~~----~~~~~~~~~~~~~-aD~~ 369 (477)
T d1rzua_ 302 WQKGIDLMAEAVDEIVSL--GGRLVVLGAGDVALE---GALLAAAS--RHHGRVGVAI----GYNEPLSHLMQAG-CDAI 369 (477)
T ss_dssp TTTTHHHHHTTHHHHHHT--TCEEEEEECBCHHHH---HHHHHHHH--HTTTTEEEEE----SCCHHHHHHHHHH-CSEE
T ss_pred ecCCcHHHHHHHHHHHhh--CCeEEEEecCCchHH---HHHHHHHh--hcCCeEEEEc----ccChhHHHHHHHh-Cccc
Confidence 999999999999998764 578889998876433 33444444 3568899998 4445677777886 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCC---------eEEEECCCCHHHHHHHHHHHHHhccCCHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK---------SGYHIDPYHGEQAAEILVDFFEKCKADPSYWD 687 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~---------~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~ 687 (700)
|+||.+|+||++++||||||+|||+|+.||++|+|.||. +|++++|+|+++||++|.++++ ..+||+.|+
T Consensus 370 v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~-~~~~~~~~~ 448 (477)
T d1rzua_ 370 IIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVR-YYHDPKLWT 448 (477)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHH-HHTCHHHHH
T ss_pred cCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHh-hhCCHHHHH
Confidence 999999999999999999999999999999999998875 8999999999999999988773 236999999
Q ss_pred HHHHHHHH
Q 005365 688 KISLGGLK 695 (700)
Q Consensus 688 ~ms~~ar~ 695 (700)
+|+++|.+
T Consensus 449 ~~~~~a~~ 456 (477)
T d1rzua_ 449 QMQKLGMK 456 (477)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99998853
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-32 Score=288.39 Aligned_cols=336 Identities=15% Similarity=0.188 Sum_probs=226.5
Q ss_pred EEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCcc
Q 005365 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358 (700)
Q Consensus 279 I~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~ 358 (700)
|+++..+++| .||.++++. +|+++|+++||+|+ |+|+...... .+
T Consensus 2 i~f~~~~y~p----------~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-------------~~ 46 (370)
T d2iw1a1 2 VAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC-------------PK 46 (370)
T ss_dssp EEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------CT
T ss_pred EEEEecCCCC----------CCCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCCC-------------CC
Confidence 7888877764 399999999 77777899999999 9986532211 12
Q ss_pred ceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 359 ~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
++.++++|...... ......|...+...+... ++|+||.+....++ .... .+..
T Consensus 47 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~d~v~~~~~~~~~-----------~~~~-~~~~ 100 (370)
T d2iw1a1 47 AFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKEH---PADRVVGFNKMPGL-----------DVYF-AADV 100 (370)
T ss_dssp TCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHHS---CCSEEEESSCCTTC-----------SEEE-CCSC
T ss_pred ceEEEEcCcccccc-----------chhhHHHHHHHHHHHHhc---ccceeeecccCchH-----------HHHH-Hhhc
Confidence 46777777654211 111223333444444443 89999987644321 1111 1111
Q ss_pred ccccCC--CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 439 EKTKYP--DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 439 ~~~~~~--~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
...... .....+ .....++....+.........++.+++.+....+.+.+..+.. ...+.+++||++...
T Consensus 101 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~vi~~gv~~~~ 172 (370)
T d2iw1a1 101 CYAEKVAQEKGFLY-RLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTE-------PERFQILPPGIYPDR 172 (370)
T ss_dssp CHHHHHHHHCCHHH-HTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCC-------GGGEEECCCCCCGGG
T ss_pred ccceeeeeecCccc-cccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHHhcCCC-------cceEEEEEeeccccc
Confidence 000000 000000 0011111111111112223467889999987766554443311 123567788887321
Q ss_pred Cccee-------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH
Q 005365 517 PKFNI-------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ 583 (700)
Q Consensus 517 ~k~~v-------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~ 583 (700)
..... ++++....+|.|+..+.||++.+++|++.+....++..+.++|+++.+ +.+++++++
T Consensus 173 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~-----~~~~~~~~~ 247 (370)
T d2iw1a1 173 KYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-----RKFEALAEK 247 (370)
T ss_dssp SGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-----HHHHHHHHH
T ss_pred ccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccceeeeccccccc-----ccccccccc
Confidence 11000 233444578999999999999999999998877666667777766543 356788889
Q ss_pred cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEE-CC
Q 005365 584 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI-DP 662 (700)
Q Consensus 584 l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv-~p 662 (700)
++..++++|+|.+. ++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||.+|++.++.+|+++ +|
T Consensus 248 ~~~~~~v~~~g~~~------~~~~~~~~-adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~ 320 (370)
T d2iw1a1 248 LGVRSNVHFFSGRN------DVSELMAA-ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEP 320 (370)
T ss_dssp HTCGGGEEEESCCS------CHHHHHHH-CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSS
T ss_pred cccccccccccccc------cccccccc-ccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCC
Confidence 99999999999543 57788886 999999999999999999999999999999999999999999999766 77
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 663 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|+++++++|.+++ +|++.+++|+++|++++++
T Consensus 321 ~d~~~la~~i~~ll----~d~~~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 321 FSQEQLNEVLRKAL----TQSPLRMAWAENARHYADT 353 (370)
T ss_dssp CCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 99999999999998 8999999999999998864
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=5.1e-20 Score=203.17 Aligned_cols=281 Identities=11% Similarity=0.008 Sum_probs=188.4
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
++..+.+.. ..-|+|+.|.+...+++..+.++ .+.++++..|..++.. . .+ +...+...-...+-.
T Consensus 112 fA~~l~~~~-~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~----~-~f-------r~lp~~~~il~~ll~ 178 (456)
T d1uqta_ 112 LADKLLPLL-QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP----E-IF-------NALPTYDTLLEQLCD 178 (456)
T ss_dssp HHHHHGGGC-CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH----H-HH-------TTSTTHHHHHHHHTT
T ss_pred HHHHHHHhc-cCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCCh----H-Hh-------ccCcchHHHHHHhhc
Confidence 344444332 24599999998777766666554 4678999999865432 1 11 111111112245778
Q ss_pred CCEEEecCHHHHHhhhhhhcccccc-----ccccCC----CeEEeecCCCCCCCccee---------------cCCCCcc
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESH-----TAFTLP----GLYRVVHGIDVFDPKFNI---------------VSPGADM 528 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~-----~~~~~p----~l~~v~nGId~~~~k~~v---------------Ip~G~d~ 528 (700)
+|.|...+........+........ ...... ....+++|||. ..+.. ...+...
T Consensus 179 ~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~--~~~~~~~~~~~~~~~~~l~~~~~~~~~ 256 (456)
T d1uqta_ 179 YDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEP--KEIAKQAAGPLPPKLAQLKAELKNVQN 256 (456)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCH--HHHHHHHHSCCCHHHHHHHHHTTTCEE
T ss_pred cccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccc--hhhhhhcccHHHHHHHHHHHhcCCCeE
Confidence 9999999977665443332211100 000000 12334455542 11110 0123345
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCcc----EEEEecCChhhH----HHHHHHHHHHHH-------cCCCCcEEEe
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENK----EHLKESKDLEEQ----AEMKKMYSLIDQ-------YKLNGQFRWI 593 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~----l~i~g~Gd~ee~----~~~~~l~~li~~-------l~L~~~V~fl 593 (700)
.++++|+.+.||+..+++|++.++...|+.. ++.++.+...+. ....++.+++.+ .+..+.+.+.
T Consensus 257 il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~ 336 (456)
T d1uqta_ 257 IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLN 336 (456)
T ss_dssp EEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEEC
T ss_pred EEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeecc
Confidence 6788999999999999999999998887642 333443432221 222333333333 3556778888
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC-----EEEcCCCCcccccccCCeEEEECCCCHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-----TFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP-----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaL 668 (700)
+ .++..++..+++. ||++++||..||||++++||||||+| +|+|+.||.++.+.+ |++++|.|++++
T Consensus 337 ~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~---g~lVnP~d~~~~ 408 (456)
T d1uqta_ 337 Q----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDRDEV 408 (456)
T ss_dssp S----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT---SEEECTTCHHHH
T ss_pred C----CcCHHHHhHHHhh-hceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC---eEEECcCCHHHH
Confidence 7 6778999999997 99999999999999999999999999 999999999999954 799999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
|++|.++++ .+++.++++.+++++++.++
T Consensus 409 A~ai~~aL~---~~~~er~~~~~~~~~~v~~~ 437 (456)
T d1uqta_ 409 AAALDRALT---MSLAERISRHAEMLDVIVKN 437 (456)
T ss_dssp HHHHHHHHT---CCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHc---CCHHHHHHHHHHHHHHHHHC
Confidence 999999982 47889999999999998753
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.84 E-value=6.3e-21 Score=186.21 Aligned_cols=159 Identities=19% Similarity=0.180 Sum_probs=129.9
Q ss_pred ccccccCCch-hhhchhhHHHHHHHHhhcC--CCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChh
Q 005365 527 DMSIYFPYTE-EKRRLKSFHPEIEELLYSD--VENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 603 (700)
Q Consensus 527 d~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll~~~--~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~ 603 (700)
...+|+|++. ++||++.++++++.+.... ++..++++|.|+..... ..+.+.+. +.+.+.+.| .++.+
T Consensus 33 ~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~---~~~~~~~~--~~~~~~~~~----~~~~~ 103 (196)
T d2bfwa1 33 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG---WARSLEEK--HGNVKVITE----MLSRE 103 (196)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHH---HHHHHHHH--CTTEEEECS----CCCHH
T ss_pred CEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchhh---hhhhhhhc--cceeEEeee----ccccc
Confidence 3468899986 5899999999999986543 45667777766543322 22333333 345566766 66678
Q ss_pred HHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCH
Q 005365 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP 683 (700)
Q Consensus 604 el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp 683 (700)
++..+|+. +|++|+||++|+||++++|||+||+|||+|+.|+..|++.+ .+|++++|+|+++++++|.+++. .++
T Consensus 104 ~l~~~~~~-~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~---~~~ 178 (196)
T d2bfwa1 104 FVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSR 178 (196)
T ss_dssp HHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHH---CCH
T ss_pred cchhcccc-ccccccccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCCHHHHHHHHHHHHh---CCH
Confidence 99999997 99999999999999999999999999999999999999865 58999999999999999999883 589
Q ss_pred HHHHHHHHHHHHHHHh
Q 005365 684 SYWDKISLGGLKRIEE 699 (700)
Q Consensus 684 ~~~~~ms~~ar~ra~e 699 (700)
+.+.+|+++|++++.+
T Consensus 179 ~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 179 SDLSKFRENCKKRAMS 194 (196)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=5.5e-21 Score=181.84 Aligned_cols=150 Identities=19% Similarity=0.254 Sum_probs=122.7
Q ss_pred ccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 527 DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
+..+|.|++.+.||++.+++|++.+ ++..++++|.+... ++.+.+.+.+.+.. .++|+|+| .++.+++.
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~--~~~~~~~~~~~~~~-~~~v~~~g----~~~~~~~~ 81 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKG--DHAERYARKIMKIA-PDNVKFLG----SVSEEELI 81 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTT--STHHHHHHHHHHHS-CTTEEEEE----SCCHHHHH
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccc--cchhhhhhhhcccc-cCcEEEee----cccccccc
Confidence 6678999999999999999999876 36678888765432 22344555555443 46899999 66679999
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH-H
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPS-Y 685 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~-~ 685 (700)
.+|+. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++ .
T Consensus 82 ~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~----~~~~~~ 155 (166)
T d2f9fa1 82 DLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS----KNPDKF 155 (166)
T ss_dssp HHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH----HCTTTT
T ss_pred ccccc-ccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH----hCHHHH
Confidence 99997 99999999999999999999999999999999999999999999998875 8999999999998 5654 3
Q ss_pred HHHHHHHH
Q 005365 686 WDKISLGG 693 (700)
Q Consensus 686 ~~~ms~~a 693 (700)
++.+.++|
T Consensus 156 ~~~~~~~a 163 (166)
T d2f9fa1 156 KKDCFRRA 163 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.19 E-value=3.1e-10 Score=118.77 Aligned_cols=79 Identities=16% Similarity=0.107 Sum_probs=61.2
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSG 657 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G 657 (700)
..++|.+.| +++..+++ . .+|+||..+- ..++.|||++|+|+|+....+ .++.+++...|
T Consensus 268 ~~~~v~i~~----~~p~~~ll---~-~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g 335 (391)
T d1pn3a_ 268 DGADCFVVG----EVNLQELF---G-RVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVG 335 (391)
T ss_dssp CCTTCCEES----SCCHHHHH---T-TSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSE
T ss_pred CCCCEEEec----ccCHHHHH---h-hccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCE
Confidence 457788888 55555554 4 4999998843 469999999999999987554 35666666789
Q ss_pred EEECCCC--HHHHHHHHHHHH
Q 005365 658 YHIDPYH--GEQAAEILVDFF 676 (700)
Q Consensus 658 ~lv~p~D--~eaLAeaI~~ll 676 (700)
..++..+ +++++++|.+++
T Consensus 336 ~~l~~~~~~~~~l~~~i~~~l 356 (391)
T d1pn3a_ 336 VAVDGPVPTIDSLSAALDTAL 356 (391)
T ss_dssp EEECCSSCCHHHHHHHHHHHT
T ss_pred EEcCcCCCCHHHHHHHHHHHh
Confidence 9998765 899999999986
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.97 E-value=7.7e-09 Score=108.27 Aligned_cols=88 Identities=16% Similarity=0.074 Sum_probs=67.0
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.++++|++.+ +++..+++ . .+|+||. .+-..++.||+++|+|+|+....+ .++.+++...|..+
T Consensus 283 ~~~~~v~~~~----~~p~~~ll---~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l 350 (401)
T d1rrva_ 283 DDRDDCFAID----EVNFQALF---R-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (401)
T ss_dssp CCCTTEEEES----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCcHHHh---h-hccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc
Confidence 3567888888 55555554 4 4999996 466789999999999999987766 56666666789999
Q ss_pred CCCC--HHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 661 DPYH--GEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 661 ~p~D--~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
+..+ ++.++++|.+++ ||+.+++.
T Consensus 351 ~~~~~~~~~L~~ai~~vl-----~~~~r~~a 376 (401)
T d1rrva_ 351 DGPTPTFESLSAALTTVL-----APETRARA 376 (401)
T ss_dssp SSSCCCHHHHHHHHHHHT-----SHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHh-----CHHHHHHH
Confidence 8754 899999999986 56555443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.91 E-value=5e-08 Score=101.40 Aligned_cols=79 Identities=15% Similarity=0.025 Sum_probs=61.2
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|++.+ +++..+++ . .+|+||. .+...++.||+++|+|+|+....+ .++.+++...|..++
T Consensus 283 ~~~nv~~~~----~~p~~~~l---~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~ 350 (401)
T d1iira_ 283 DGADCFAIG----EVNHQVLF---G-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD 350 (401)
T ss_dssp CGGGEEECS----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS
T ss_pred CCCCEEEEe----ccCHHHHH---h-hcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcC
Confidence 456788888 55555554 4 4999995 477889999999999999976555 455666666899887
Q ss_pred CC--CHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFF 676 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll 676 (700)
.. ++++++++|.+++
T Consensus 351 ~~~~~~~~l~~ai~~~l 367 (401)
T d1iira_ 351 GPIPTFDSLSAALATAL 367 (401)
T ss_dssp SSSCCHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHh
Confidence 76 6999999999986
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=8e-07 Score=91.01 Aligned_cols=93 Identities=14% Similarity=-0.013 Sum_probs=63.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC---C----cccccccCCeEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---G----PAEIIVNGKSGY 658 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G---G----~~EiI~dg~~G~ 658 (700)
...++...++.. ++..+|+. +|++|.-+ =+.++.||++||+|+|..... + .++.+++-..|+
T Consensus 229 ~~~~~~v~~f~~------~~~~lm~~-adl~It~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~ 297 (351)
T d1f0ka_ 229 GQPQHKVTEFID------DMAAAYAW-ADVVVCRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAK 297 (351)
T ss_dssp TCTTSEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEE
T ss_pred ccccceeeeehh------hHHHHHHh-Cchhhccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEE
Confidence 345577777543 35677776 99998852 248999999999999986532 1 244555666888
Q ss_pred EECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 659 HIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 659 lv~p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
.++..+ ++.+.++|.. -+++.+.+|++++++
T Consensus 298 ~~~~~~~~~e~l~~~l~~------l~~~~~~~~~~~~~~ 330 (351)
T d1f0ka_ 298 IIEQPQLSVDAVANTLAG------WSRETLLTMAERARA 330 (351)
T ss_dssp ECCGGGCCHHHHHHHHHT------CCHHHHHHHHHHHHH
T ss_pred EechhhCCHHHHHHHHHh------hCHHHHHHHHHHHHc
Confidence 886433 5666666544 267788889888875
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.16 E-value=4.2e-05 Score=80.59 Aligned_cols=85 Identities=14% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccc-cCCeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~-dg~~G~lv~ 661 (700)
..++.+.. +++..++.. .. .+++||.= |=..++.||+.+|+|+|+....+ .+..++ ....|..++
T Consensus 318 ~~nv~~~~----~~pq~~lL~-hp-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 318 RGYGMVVP----WAPQAEVLA-HE-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred cccccccc----cCChHhhhc-cC-ceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 45677776 555555442 12 36777765 33469999999999999986554 344454 446899887
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
.+ +++++.++|.+++ +|+.+
T Consensus 388 ~~~~t~~~l~~ai~~vL----~d~~y 409 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQIL----SQEKG 409 (450)
T ss_dssp GGSCCHHHHHHHHHHHH----HSHHH
T ss_pred CCCcCHHHHHHHHHHHh----cCcHH
Confidence 65 6799999999999 78754
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.04 E-value=0.0013 Score=68.26 Aligned_cols=257 Identities=11% Similarity=0.045 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH
Q 005365 390 YTEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 390 f~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
....+.+.+.+. +||+|..+. ....+.++.+|..+++|+++ +|+...+.-... .+ .+...+. .
T Consensus 76 ~~~~~~~~l~~~---kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~--~~--~de~~R~--------~ 139 (373)
T d1v4va_ 76 ILPQAARALKEM---GADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PF--PEEANRR--------L 139 (373)
T ss_dssp HHHHHHHHHHHT---TCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--ST--THHHHHH--------H
T ss_pred HHHHHhhhhhhc---CcccccccccCccchhHHHHHHHhhhhhee-eccccccccccc--Cc--chhhhhh--------h
Confidence 333444445554 899988865 34456677888899999987 555332210000 00 0111111 2
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC-----Cc-ceecCCCCccccccCCchhhhchh
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD-----PK-FNIVSPGADMSIYFPYTEEKRRLK 542 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~-----~k-~~vIp~G~d~~~F~g~~~~~Kgl~ 542 (700)
+-+.||...|++....+.+.+. |.. ..+.+.... .++|... .+ ....+++.-..+...+....+...
T Consensus 140 iskls~~hf~~t~~~~~~L~~~-Ge~-~~~I~~vG~-----p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~ 212 (373)
T d1v4va_ 140 TDVLTDLDFAPTPLAKANLLKE-GKR-EEGILVTGQ-----TGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLS 212 (373)
T ss_dssp HHHHCSEEEESSHHHHHHHHTT-TCC-GGGEEECCC-----HHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHH
T ss_pred hccccceeeecchhhhhhhhhh-ccc-ccceeeccc-----chhhHHHhhhhhcccccccccccceeEEeccccccchHH
Confidence 3445888899997665422211 110 111111100 0111000 00 000111111122233444445556
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
.+..++..+.....+..+.+....... ....+. +......++.++. .+...+...+++. |++++--|
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~p~~~~~~---~~~~~~---~~~~~~~n~~~~~----~l~~~~~l~ll~~-s~~vignS-- 279 (373)
T d1v4va_ 213 DLAQALKRVAEAFPHLTFVYPVHLNPV---VREAVF---PVLKGVRNFVLLD----PLEYGSMAALMRA-SLLLVTDS-- 279 (373)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCSCHH---HHHHHH---HHHTTCTTEEEEC----CCCHHHHHHHHHT-EEEEEESC--
T ss_pred HHHHHHHHHhhhcccceeeeeeccccc---chhhhh---hhhcccccceeec----cchHHHHHHHhhh-ceeEeccc--
Confidence 666777777666656555544433321 112222 2334456799987 6778899999986 77776554
Q ss_pred CCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 005365 623 EAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISL 691 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~ 691 (700)
|-.+.||.++|+|||.- +.|.-.+-++.|.+ .+++ .|++++.+++..++ .++..+.++..
T Consensus 280 ---ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~~~I~~~i~~~l----~~~~~~~~~~~ 340 (373)
T d1v4va_ 280 ---GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDPEGVYRVVKGLL----ENPEELSRMRK 340 (373)
T ss_dssp ---HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCHHHHHHHHHHHH----TCHHHHHHHHH
T ss_pred ---chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcC-CCHHHHHHHHHHHH----cCHHHHhhccc
Confidence 77888999999999998 56777777777655 4554 48999999999988 89998888754
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.96 E-value=0.001 Score=69.26 Aligned_cols=60 Identities=20% Similarity=0.116 Sum_probs=44.8
Q ss_pred CcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----Cccccc-ccCCeEEEECCC--------CHHHHHHHHHHHH
Q 005365 613 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEII-VNGKSGYHIDPY--------HGEQAAEILVDFF 676 (700)
Q Consensus 613 aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI-~dg~~G~lv~p~--------D~eaLAeaI~~ll 676 (700)
+++||.= |-..++.||+.+|+|+|+.... ..+..+ +....|..++.. ++++++++|.+++
T Consensus 349 ~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl 421 (461)
T d2acva1 349 IGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLM 421 (461)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHT
T ss_pred CCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHh
Confidence 6777764 3346999999999999997543 344443 555678887642 6799999999998
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.65 E-value=0.0025 Score=66.38 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=59.3
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccc-ccCCeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI-~dg~~G~lv~ 661 (700)
++||.... +++..++.. .. .+++||.= |=..++.||+.+|+|+|+... ...+.-| +....|..++
T Consensus 345 ~~Nv~~~~----~~Pq~~lL~-hp-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIAS----WCPQDKVLN-HP-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred cCceEEee----eCCHHHHhc-CC-cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 45677776 555555541 02 36778775 334699999999999999754 3445545 4446798887
Q ss_pred CC-CHHHHHHHHHHHHHhccCCHH
Q 005365 662 PY-HGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 662 p~-D~eaLAeaI~~ll~~~~~dp~ 684 (700)
.. +.++++++|.+++ .|+.
T Consensus 415 ~~~t~~~l~~ai~~vl----~d~~ 434 (473)
T d2pq6a1 415 TNVKREELAKLINEVI----AGDK 434 (473)
T ss_dssp SSCCHHHHHHHHHHHH----TSHH
T ss_pred CCcCHHHHHHHHHHHH----cCCh
Confidence 54 7899999999999 7875
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.42 E-value=0.0026 Score=66.12 Aligned_cols=257 Identities=13% Similarity=0.078 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHH
Q 005365 389 TYTEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADL 467 (700)
Q Consensus 389 ~f~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~ 467 (700)
.....+.+.+.+. +||+|..+. ....+.++.+|..+++|+++ +|+.+.+... .+...+...+.
T Consensus 75 ~~i~~~~~~~~~~---kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~~~----~~~~~de~~R~-------- 138 (377)
T d1o6ca_ 75 NALVRLDELFKDI---KPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTGNK----YSPFPEELNRQ-------- 138 (377)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCT----TTTTTHHHHHH--------
T ss_pred HHHHhhhhhhhhc---ccceeEeeecccccchhhhhhhhccceEEE-Eecccccccc----cccCchhhhcc--------
Confidence 3334445555565 899988865 44566788899999999976 6655443211 01111222221
Q ss_pred HHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-----CCCcceecC--CCCc--cccccCCc-hh
Q 005365 468 IAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV-----FDPKFNIVS--PGAD--MSIYFPYT-EE 537 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~-----~~~k~~vIp--~G~d--~~~F~g~~-~~ 537 (700)
.+-+.||...+++...++.+.+. |.. ..+.|.... .++|. .......+. .+.+ ..+...+. ..
T Consensus 139 ~iskls~~hf~~t~~~~~~L~~~-G~~-~~~I~~vG~-----~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~ 211 (377)
T d1o6ca_ 139 MTGAIADLHFAPTGQAKDNLLKE-NKK-ADSIFVTGN-----TAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENL 211 (377)
T ss_dssp HHHHHCSEEEESSHHHHHHHHHT-TCC-GGGEEECCC-----HHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC------
T ss_pred ccccceeEEeecchhhhhhhhhh-ccc-cceEeeccc-----hhHHHHHHHHHHHHhhhhhhhccCCceEEEEecccccc
Confidence 22345899999997665432221 111 111111100 01110 000000000 0011 11111111 11
Q ss_pred hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 538 KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 538 ~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
.+.....+.++..+.....+..+.+.... +. . ......+.+...++|.++. .+...+...+++. |++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~--~---~~~~~~~~~~~~~ni~~~~----~l~~~~fl~llk~-s~~vI 280 (377)
T d1o6ca_ 212 GEPMENMFKAIRRIVGEFEDVQVVYPVHL-NP--V---VREAAHKHFGDSDRVHLIE----PLEVIDFHNFAAK-SHFIL 280 (377)
T ss_dssp ----HHHHHHHHHHHHHCTTEEEEEC-----C--H---HHHHHHHC--CCSSEEECC----CCCHHHHHHHHHH-CSEEE
T ss_pred ccchHHHHHHHHhhccccccccccccccc-cc--c---cchhhhhccccccceEecc----ccchHHHHHHHhh-hheee
Confidence 12233444444444444434333322221 11 1 1111222344567899998 7778999999997 88877
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKIS 690 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms 690 (700)
-=| |-.+.||-..|+|+|.-.. +.-.+-++.|.+ .++++ |.+++.+++..++ .++..+..+.
T Consensus 281 gnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-ilv~~-~~~~I~~~i~~~l----~~~~~~~~~~ 343 (377)
T d1o6ca_ 281 TDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KLAGT-DEENIYQLAKQLL----TDPDEYKKMS 343 (377)
T ss_dssp EC-------CHHHHGGGGTCCEEEECSCCC---CTTTTSS-EEECS-CHHHHHHHHHHHH----HCHHHHHHHH
T ss_pred ccc-----chhHHhhhhhhceEEEeCCCCcCcchhhcCee-EECCC-CHHHHHHHHHHHH----hChHHHhhhc
Confidence 443 5568899999999998633 445566666644 56765 8899999998887 7887777653
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.38 E-value=0.0039 Score=64.74 Aligned_cols=252 Identities=10% Similarity=0.071 Sum_probs=137.2
Q ss_pred HHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+...+.+. +||+|..+. ....+.++.+|..+++|+++ +|+.+.+.- ..+...+...+. ..-
T Consensus 76 ~~~~~~~~~~---kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s~~----~~~~~pde~~R~--------~is 139 (376)
T d1f6da_ 76 EGLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRTGD----LYSPWPEEANRT--------LTG 139 (376)
T ss_dssp HHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCCSC----TTSSTTHHHHHH--------HHH
T ss_pred HhhHHHHHhc---cCcceeeeccccchhhHHHHHHhhCceEEE-Eeccccccc----ccccCchhhhhh--------hhc
Confidence 3344455555 899988865 45567788888999999877 666544321 111111222211 223
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCC--------CCCc-c--------eecCCCC--cccc
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDV--------FDPK-F--------NIVSPGA--DMSI 530 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~--------~~~k-~--------~vIp~G~--d~~~ 530 (700)
+.||...|++....+.+.+. |.- ..+ ++.+-+ ++|. ...+ + ....... -...
T Consensus 140 kls~~hf~~~~~~~~~L~~~-G~~-~~~------I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt 211 (376)
T d1f6da_ 140 HLAMYHFSPTETSRQNLLRE-NVA-DSR------IFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT 211 (376)
T ss_dssp HTCSEEEESSHHHHHHHHHT-TCC-GGG------EEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEC
T ss_pred cceeEEEeccHHHHhHHHhc-CCC-ccc------cceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEe
Confidence 45888888886665422111 110 011 111100 1110 0000 0 0000001 1122
Q ss_pred ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 531 YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 531 F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
|.+.....+.+..+..++..+.....+..+.+-...... ......+ .+....++.++. .+...+...+++
T Consensus 212 ~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~---~~~~~~~---~~~~~~ni~~~~----~l~~~~fl~ll~ 281 (376)
T d1f6da_ 212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPN---VREPVNR---ILGHVKNVILID----PQEYLPFVWLMN 281 (376)
T ss_dssp CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHH---HHHHHHH---HHTTCTTEEEEC----CCCHHHHHHHHH
T ss_pred cccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchh---hhhhHhh---hhcccccceeec----cccHHHHHHHHh
Confidence 334444445666777777777665545444433322211 1112222 234456799987 667788888898
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
. |++++-=| |-.+.||-..|+|+|.-.. ..-++-+..| +-.++++ |.+++.+++.+++ .++..+..+
T Consensus 282 ~-a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~~~I~~ai~~~l----~~~~~~~~~ 349 (376)
T d1f6da_ 282 H-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLL----KDENEYQAM 349 (376)
T ss_dssp H-CSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SHHHHHHHHHHHH----HCHHHHHHH
T ss_pred h-ceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-CHHHHHHHHHHHH----hChHhhhhh
Confidence 6 88777554 5567799999999997522 3344555555 4566664 8999999999887 677666554
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.35 E-value=0.022 Score=58.90 Aligned_cols=85 Identities=12% Similarity=0.104 Sum_probs=59.1
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----ccccc-ccCCeEEEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEII-VNGKSGYHI 660 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI-~dg~~G~lv 660 (700)
.+++|.+.+ +++..++... . .+++||.= |=.+++.||+.+|+|+|+....+ .+..+ +.-..|..+
T Consensus 332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l 401 (471)
T d2vcha1 332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 401 (471)
T ss_dssp TTTEEEEES----CCCHHHHHHS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred cCCCeeecc----cCCHHHHhcC-c-cCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEE
Confidence 457799988 6666666531 1 36778764 33469999999999999975433 34444 333467766
Q ss_pred CCC-----CHHHHHHHHHHHHHhccCCHH
Q 005365 661 DPY-----HGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 661 ~p~-----D~eaLAeaI~~ll~~~~~dp~ 684 (700)
... +.++++++|.+++ +|++
T Consensus 402 ~~~~~~~~t~~~l~~ai~~vl----~~~~ 426 (471)
T d2vcha1 402 RAGDDGLVRREEVARVVKGLM----EGEE 426 (471)
T ss_dssp CCCTTSCCCHHHHHHHHHHHH----TSTH
T ss_pred ecCCCCcCCHHHHHHHHHHHh----CCcH
Confidence 543 6799999999998 7754
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.82 E-value=0.083 Score=59.18 Aligned_cols=134 Identities=13% Similarity=0.020 Sum_probs=90.1
Q ss_pred CCCccccccCCchhhhchhhHHH----HHHHHhhcCC--C-c-cEEEEec---CChhhHHHHHHHHHHHHHcCCC-----
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHP----EIEELLYSDV--E-N-KEHLKES---KDLEEQAEMKKMYSLIDQYKLN----- 587 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~----Ai~~Ll~~~~--~-~-~l~i~g~---Gd~ee~~~~~~l~~li~~l~L~----- 587 (700)
+..-++.|.-|+.+.||....+. ....+..... . + .++++|- +|...+..++.+.++++..+.+
T Consensus 548 p~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~ 627 (824)
T d2gj4a1 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred cchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhcc
Confidence 34445667788889999876332 2344444321 1 2 3334432 3333344455555555433332
Q ss_pred -CcEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 588 -GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 588 -~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
.+|.|+. |. +-.+.+.+-.++||..+-|+ .|+.|.+=+-||.-|.+.++|-.|...|+.++ ++|||.|-.
T Consensus 628 ~lkVvFle---nY--~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 628 RLRVIFLE---NY--RVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp GEEEEEET---TC--CHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred ceeEEEcC---CC--chHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCC
Confidence 2588886 22 45677777777999999876 79999999999999999999999999999875 789999853
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=95.70 E-value=0.042 Score=61.60 Aligned_cols=134 Identities=13% Similarity=0.001 Sum_probs=91.5
Q ss_pred CCCccccccCCchhhhchhhHHHHHHH----HhhcCC----CccEEEEec---CChhhHHHHHHHHHHHHHcCC----C-
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEE----LLYSDV----ENKEHLKES---KDLEEQAEMKKMYSLIDQYKL----N- 587 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~----Ll~~~~----~~~l~i~g~---Gd~ee~~~~~~l~~li~~l~L----~- 587 (700)
+.+-++.|.-|+.+.||...++.-+.. +..... ...++++|- +|...+..++.+.++++..+- .
T Consensus 524 p~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred hhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhcc
Confidence 444466788889999998875544333 322211 123444443 233334445555555543322 2
Q ss_pred -CcEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 588 -GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 588 -~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
.+|.|+. |. +-++.+.+-.++||-.+.++ .|+.|.+-+-||.-|.+.++|-.|...|+.++ ++|||.+..
T Consensus 604 ~~kVVFle---nY--dv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 604 KLKVVFLP---DY--CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp GEEEEECS---SC--CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred ceeEEEeC---CC--chHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 2688886 32 45777777778999999876 79999999999999999999999999999875 889999953
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.53 E-value=0.2 Score=49.65 Aligned_cols=86 Identities=10% Similarity=0.012 Sum_probs=51.6
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.+..+... +..+++.|++ .+.+..+.+.+.+.......-+.+.| ..+..|+..++.. +|++|.+.
T Consensus 201 ~~~~L~~~l~~~--~~~ivl~g~~--~e~~~~~~~~~~~~~~~~~~~~~l~g----~~sl~el~~li~~-a~l~I~~D-- 269 (348)
T d1pswa_ 201 HYAELAKQLIDE--GYQVVLFGSA--KDHEAGNEILAALNTEQQAWCRNLAG----ETQLDQAVILIAA-CKAIVTND-- 269 (348)
T ss_dssp HHHHHHHHHHHT--TCEEEECCCG--GGHHHHHHHHTTSCHHHHTTEEECTT----TSCHHHHHHHHHT-SSEEEEES--
T ss_pred HHhhhHHHHhhc--CCcccccccc--chHHHHHHHHHhhhcccccccccccC----CccHHHHHHHHhc-ceeEeecC--
Confidence 455556666543 3455555544 23222233322111111123345556 6678999999997 99999984
Q ss_pred CCccHHHHHHHHcCCCEEEc
Q 005365 623 EAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVAT 642 (700)
+..+--|.++|+|+|+-
T Consensus 270 ---tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 270 ---SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp ---SHHHHHHHHTTCCEEEE
T ss_pred ---ccHHHHHHHcCCCEEEE
Confidence 34668899999999994
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=87.16 E-value=2.4 Score=40.12 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=24.0
Q ss_pred CCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEecC
Q 005365 403 QGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 403 ~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H~ 437 (700)
..+||+|.+ |. +.+...|+.-+...|+|-+..-.+
T Consensus 84 ~~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~~ 129 (247)
T d1j9ja_ 84 DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred cCcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehhh
Confidence 458999988 22 233445666777899998886543
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=85.95 E-value=0.7 Score=43.42 Aligned_cols=39 Identities=41% Similarity=0.729 Sum_probs=24.2
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEec
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~ 337 (700)
||||++|++|.- ..++| .||. ...++++|++|. |+++|.
T Consensus 1 m~~VLvi~aHPD---De~lg---~GGt---------------iak~~~~G~~V~--vv~~T~ 39 (227)
T d1uana_ 1 MLDLLVVAPHPD---DGELG---CGGT---------------LARAKAEGLSTG--ILDLTR 39 (227)
T ss_dssp CEEEEEEESSTT---HHHHH---HHHH---------------HHHHHHTTCCEE--EEEEEC
T ss_pred CceEEEEEeCCC---hHHHH---HHHH---------------HHHHHHcCCeEE--EEEEeC
Confidence 589999999942 12232 3442 123688999999 334443
|