Citrus Sinensis ID: 005411
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 698 | 2.2.26 [Sep-21-2011] | |||||||
| P38094 | 865 | Protein fluG OS=Emericell | yes | no | 0.941 | 0.759 | 0.311 | 3e-86 | |
| Q86B00 | 499 | Type-1 glutamine syntheta | no | no | 0.425 | 0.595 | 0.288 | 2e-30 | |
| O59648 | 446 | Glutamine synthetase OS=M | yes | no | 0.385 | 0.603 | 0.298 | 6e-29 | |
| P21154 | 446 | Glutamine synthetase OS=M | yes | no | 0.388 | 0.607 | 0.303 | 9e-29 | |
| O58097 | 443 | Glutamine synthetase OS=P | yes | no | 0.388 | 0.611 | 0.290 | 4e-28 | |
| Q60182 | 454 | Glutamine synthetase OS=M | yes | no | 0.399 | 0.614 | 0.299 | 1e-27 | |
| P43386 | 456 | Glutamine synthetase OS=H | yes | no | 0.386 | 0.592 | 0.307 | 1e-27 | |
| Q05907 | 439 | Glutamine synthetase OS=P | yes | no | 0.381 | 0.605 | 0.296 | 2e-27 | |
| O27612 | 442 | Glutamine synthetase OS=M | yes | no | 0.383 | 0.606 | 0.297 | 2e-26 | |
| P36687 | 439 | Glutamine synthetase 1 OS | N/A | no | 0.381 | 0.605 | 0.293 | 4e-26 |
| >sp|P38094|FLUG_EMENI Protein fluG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fluG PE=1 SV=1 | Back alignment and function desciption |
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Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 228/733 (31%), Positives = 358/733 (48%), Gaps = 76/733 (10%)
Query: 6 LREVVENIELVDGHAHNIVSLDSS-----FPFIQSFSEATGPALSYAPYSLSFKRNLKNI 60
LR +++ L+D HAHN++S ++ +PF Q SEA G AL+ AP +LSF R +
Sbjct: 7 LRHLIQTHPLIDNHAHNLLSQSAACKYAKYPFEQIISEAQGVALANAPSTLSFHRAASQL 66
Query: 61 AELYGCDSS----LQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHK 116
A LY SS ++A + + + C E + +L+DD L + DWH
Sbjct: 67 ATLYQSSSSDWDSVRAARDQSVQRDYEGLIRKCLEGTQV--LLLDDLLTENDVELFDWHD 124
Query: 117 SLVP-FVGRILRIERLAEEILDQASPDGSI-------WTLDVFIETFLKQLRS------A 162
RI+RIE LA +L Q G + E+F + + A
Sbjct: 125 RFTASATKRIVRIEALAASVLSQIVHGGPVPQDSSDLSAFQTLWESFSRNFSALVSDAIA 184
Query: 163 ANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS------GKPVRITNKSLIDYIF 216
+VG KS+ YR+GL++ P +D E + R+ P R+ +K L D++
Sbjct: 185 DPAVVGFKSVICYRTGLDVQP-TDDRDTERLIRSFARTISQAAVSTP-RVEDKPLNDWLV 242
Query: 217 ISSLEVAQFLDL-----PLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS 271
+L + + + PLQ+HTG GD D++L SNP HL++++ ++ + FVLLH+S
Sbjct: 243 RQTLNLLKAAKVTQPNKPLQLHTGLGDNDINLLKSNPAHLQSLI--AQYPEVDFVLLHSS 300
Query: 272 YPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331
YP+++EA YLA VYP VYLD G P +S S ++E LE+ P+ ++++STD + PE
Sbjct: 301 YPYTREAGYLACVYPNVYLDLGEVFPMVSRDAQESILRESLEIVPSTRLLWSTDGHFFPE 360
Query: 332 TYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKD 391
T++L ++ R+ + V D + D ++ +A++ A DI N+ + Y++N A+
Sbjct: 361 TFWLANRQFRDALEKVFVDYVQNGDYTIEQAMQAAADILFHNSNRLYELNEQPPS-AALS 419
Query: 392 DMHQIY--LKKSDAFESDVSL---IRVIW---VDASGQHRCRVVPVKRFNDIVTKY-GVG 442
HQ + +D E + ++ +W +D + R R+ PV F IV K +G
Sbjct: 420 SGHQTVSRISSTDLLEKFIRSNPGVKYVWTQFIDYTATVRVRMFPVMEFAKIVRKQRRLG 479
Query: 443 LTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGEP 501
++ A M D G S TG+ L+PDLST + + +M + GE
Sbjct: 480 ISMATFWMLQ--DDEVVGG--STTGQFYLIPDLSTLSPNVGIDSKSATVMTWWKSEQGES 535
Query: 502 WEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVL--REGKEEWVP--IDFTPYCS 557
E CPR L ++ LK+EF + GFEIE LK G+E+W P + +
Sbjct: 536 LEECPRTNLLNINNKLKDEFGIQATCGFEIEVVFLKPTTDPSTGEEDWAPSVTNHSWSQM 595
Query: 558 TAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVL 617
T + P+ +E+ L S+ I ++Q HAE+ GQFE L A D LI +R+V+
Sbjct: 596 TRETRRMLPLLEEIAETLASIGIHLQQFHAESAPGQFEFILPPDNPVAAVDTLIKSRQVI 655
Query: 618 RAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMA 677
+ KHGL AT P+ G+ SH H+S+ S+ E F+A
Sbjct: 656 ANIVEKHGLRATLYPRPYPSAAGTASHAHVSI-----------------SPSTKEESFLA 698
Query: 678 GVLHHLSSILAFT 690
GVL H ++LAFT
Sbjct: 699 GVLQHYPAVLAFT 711
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May function as a GSI-related enzyme in synthesizing a small diffusible factor that acts as an extracellular signal directing asexual sporulation and perhaps other aspects of colony growth. May be involved in brlA activation (an early transcriptional regulator for conidiation specific gene). Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) |
| >sp|Q86B00|GLNA1_DICDI Type-1 glutamine synthetase 1 OS=Dictyostelium discoideum GN=glnA1 PE=3 SV=1 | Back alignment and function description |
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| >sp|O59648|GLNA_METMP Glutamine synthetase OS=Methanococcus maripaludis (strain S2 / LL) GN=glnA PE=3 SV=1 | Back alignment and function description |
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| >sp|P21154|GLNA_METVO Glutamine synthetase OS=Methanococcus voltae GN=glnA PE=3 SV=1 | Back alignment and function description |
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| >sp|O58097|GLNA_PYRHO Glutamine synthetase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=glnA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q60182|GLNA_METJA Glutamine synthetase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=glnA PE=3 SV=1 | Back alignment and function description |
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| >sp|P43386|GLNA_HALVD Glutamine synthetase OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=glnA PE=3 SV=2 | Back alignment and function description |
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| >sp|Q05907|GLNA_PYRFU Glutamine synthetase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=glnA PE=3 SV=2 | Back alignment and function description |
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| >sp|O27612|GLNA_METTH Glutamine synthetase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=glnA PE=3 SV=1 | Back alignment and function description |
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| >sp|P36687|GLNA_PYRWO Glutamine synthetase 1 OS=Pyrococcus woesei GN=glnA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 698 | ||||||
| 225441137 | 843 | PREDICTED: protein fluG-like [Vitis vini | 0.994 | 0.823 | 0.726 | 0.0 | |
| 297739992 | 840 | unnamed protein product [Vitis vinifera] | 0.989 | 0.822 | 0.716 | 0.0 | |
| 394987256 | 843 | glutamine synthetase [Camellia sinensis] | 0.994 | 0.823 | 0.705 | 0.0 | |
| 224069607 | 830 | predicted protein [Populus trichocarpa] | 0.978 | 0.822 | 0.717 | 0.0 | |
| 449451064 | 841 | PREDICTED: protein fluG-like [Cucumis sa | 0.995 | 0.826 | 0.693 | 0.0 | |
| 255556828 | 784 | Protein fluG, putative [Ricinus communis | 0.991 | 0.882 | 0.699 | 0.0 | |
| 297816616 | 853 | hypothetical protein ARALYDRAFT_485693 [ | 0.995 | 0.814 | 0.661 | 0.0 | |
| 145339441 | 852 | glutamate-ammonia ligase-like protein [A | 0.995 | 0.815 | 0.658 | 0.0 | |
| 6630738 | 845 | nodulin / glutamate-ammonia ligase-like | 0.995 | 0.822 | 0.655 | 0.0 | |
| 357146455 | 842 | PREDICTED: protein fluG-like isoform 1 [ | 0.992 | 0.823 | 0.635 | 0.0 |
| >gi|225441137|ref|XP_002266164.1| PREDICTED: protein fluG-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/695 (72%), Positives = 594/695 (85%), Gaps = 1/695 (0%)
Query: 2 EFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNIA 61
++ ELRE VE +ELVD HAHNIV+LDS+FPFI FSEA G ALSYA +SL FKR+L+ IA
Sbjct: 3 KYAELREAVEKVELVDAHAHNIVALDSAFPFIGCFSEANGDALSYATHSLCFKRSLREIA 62
Query: 62 ELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVPF 121
ELYG + SL VEEYRR +GLQSI S CF+AA I+A+LIDDG+ DKKH + WH++ P
Sbjct: 63 ELYGSEVSLSGVEEYRRCSGLQSITSTCFKAARITAILIDDGIDFDKKHDIQWHRNFTPI 122
Query: 122 VGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEI 181
VGRILRIE LAE+ILD+ +PDGS WTLDVF F+ +L+S A+ I GLKSIAAYRSGLEI
Sbjct: 123 VGRILRIEHLAEKILDEEAPDGSPWTLDVFTAIFVGKLKSVADGISGLKSIAAYRSGLEI 182
Query: 182 NPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDL 241
N +V+++DAEEGLAE L +GKPVRITNK+ IDYIF SLEVA DLP+Q+HTGFGD+DL
Sbjct: 183 NTNVSRQDAEEGLAEVLYAGKPVRITNKNFIDYIFTRSLEVALCFDLPMQLHTGFGDRDL 242
Query: 242 DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSV 301
DLRL+NPLHLR +LEDKRFSKCR VLLHASYPFSKEASYLA VYPQVYLDFGLAIPKLS
Sbjct: 243 DLRLANPLHLRTLLEDKRFSKCRIVLLHASYPFSKEASYLASVYPQVYLDFGLAIPKLST 302
Query: 302 QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361
GMISS+KELLELAP KKVMFSTD YA PET++LGAK+AREVVF+VLRD CID DLS+ E
Sbjct: 303 HGMISSVKELLELAPIKKVMFSTDGYAFPETFYLGAKKAREVVFTVLRDACIDGDLSIPE 362
Query: 362 AIEVAKDIFALNAAQFYKINLGVKDFASKDDMHQIYLK-KSDAFESDVSLIRVIWVDASG 420
A+E A+DIFA NA QFYK+N+ +K K+ + + +++ ++D++L+R+IWVDASG
Sbjct: 363 AVEAAEDIFAKNAIQFYKLNVAMKSIDLKNAICPKLMSIGNNSSQNDITLVRIIWVDASG 422
Query: 421 QHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR 480
Q RCRVVP +RF D+V K GVGLTFACMGM+SA+DGPADGTNLSG GE RL+PDLST+ R
Sbjct: 423 QQRCRVVPARRFYDVVLKNGVGLTFACMGMSSAIDGPADGTNLSGVGETRLVPDLSTKCR 482
Query: 481 IPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVL 540
IPW KQEEM++ADMHLKPG+PWEYCPREALR++S++LK+EFNLVLNAGFE+EFYLLK +L
Sbjct: 483 IPWAKQEEMVLADMHLKPGKPWEYCPREALRRISKVLKDEFNLVLNAGFEVEFYLLKRIL 542
Query: 541 REGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGH 600
REGKEEWVP D TPYCST+A+DA SP+F EVLA L SLN+ VEQLHAEAGKGQFEIALGH
Sbjct: 543 REGKEEWVPFDSTPYCSTSAFDAASPIFHEVLAALQSLNVPVEQLHAEAGKGQFEIALGH 602
Query: 601 TVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMAS 660
TV + +ADNLIFT EV++A AR+HGLLATFVPK+ LDDIGSGSHVH+SLW+NGENVFMAS
Sbjct: 603 TVCSCSADNLIFTHEVIKACARRHGLLATFVPKYTLDDIGSGSHVHISLWENGENVFMAS 662
Query: 661 DSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695
S +G+S VGE+FMAGVLHHL SILAFTAPVPN
Sbjct: 663 GQGSHYGISKVGEEFMAGVLHHLPSILAFTAPVPN 697
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739992|emb|CBI30174.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|394987256|gb|AFN42875.1| glutamine synthetase [Camellia sinensis] | Back alignment and taxonomy information |
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| >gi|224069607|ref|XP_002326385.1| predicted protein [Populus trichocarpa] gi|222833578|gb|EEE72055.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449451064|ref|XP_004143282.1| PREDICTED: protein fluG-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255556828|ref|XP_002519447.1| Protein fluG, putative [Ricinus communis] gi|223541310|gb|EEF42861.1| Protein fluG, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297816616|ref|XP_002876191.1| hypothetical protein ARALYDRAFT_485693 [Arabidopsis lyrata subsp. lyrata] gi|297322029|gb|EFH52450.1| hypothetical protein ARALYDRAFT_485693 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|145339441|ref|NP_190886.4| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gi|332645524|gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|6630738|emb|CAB64221.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357146455|ref|XP_003573998.1| PREDICTED: protein fluG-like isoform 1 [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 698 | ||||||
| TAIR|locus:2101983 | 852 | NodGS "nodulin/glutamine synth | 0.994 | 0.814 | 0.660 | 2.3e-252 | |
| ASPGD|ASPL0000074483 | 865 | fluG [Emericella nidulans (tax | 0.716 | 0.578 | 0.326 | 1.3e-84 | |
| DICTYBASE|DDB_G0280191 | 440 | DDB_G0280191 "amidohydrolase 2 | 0.249 | 0.395 | 0.449 | 1.4e-53 | |
| DICTYBASE|DDB_G0276835 | 499 | glnA1 "glutamate-ammonia ligas | 0.434 | 0.607 | 0.288 | 5.8e-29 | |
| TIGR_CMR|CHY_0712 | 443 | CHY_0712 "glutamine synthetase | 0.371 | 0.584 | 0.314 | 1.3e-26 | |
| TIGR_CMR|BA_3833 | 444 | BA_3833 "glutamine synthetase, | 0.346 | 0.545 | 0.315 | 2.5e-22 | |
| DICTYBASE|DDB_G0295755 | 521 | glnA2 "glutamine synthetase ty | 0.399 | 0.535 | 0.287 | 7.6e-22 | |
| UNIPROTKB|Q5LQ88 | 451 | SPO2607 "Gamma-glutamylisoprop | 0.325 | 0.503 | 0.304 | 4.1e-21 | |
| TIGR_CMR|SPO_2607 | 451 | SPO_2607 "gamma-glutamylisopro | 0.325 | 0.503 | 0.304 | 4.1e-21 | |
| TIGR_CMR|CHY_0704 | 442 | CHY_0704 "glutamine synthetase | 0.333 | 0.527 | 0.293 | 6e-21 |
| TAIR|locus:2101983 NodGS "nodulin/glutamine synthase-like protein" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2430 (860.5 bits), Expect = 2.3e-252, P = 2.3e-252
Identities = 467/707 (66%), Positives = 572/707 (80%)
Query: 1 MEFEELREVVENIELVDGHAHNIVSLDSSFPFIQSFSEATGPALSYAPYSLSFKRNLKNI 60
MEF EL+E +E IELVD HAHNIVSLDSSFPFI +FSEA G AL++AP+SLSFKRNL+ I
Sbjct: 1 MEFSELKEAIEKIELVDAHAHNIVSLDSSFPFIGTFSEAAGDALTFAPHSLSFKRNLREI 60
Query: 61 AELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP 120
A+LYG + SL+AVEE+R+ +GL S S CF+ A ISA+LIDDGLKLDKKH ++WH++ VP
Sbjct: 61 AQLYGTEVSLEAVEEHRKTSGLDSFTSKCFKEARISALLIDDGLKLDKKHDIEWHRNFVP 120
Query: 121 FVGRILRIERLAEEILDQASPDG----------SIWTLDVFIETFLKQLRSAANKIVGLK 170
FVGR+LRIE LAE+IL++ P G +W LD F +TF+++L S +IV LK
Sbjct: 121 FVGRVLRIETLAEQILEEECPGGYFYGSESTEPPVWDLDSFTKTFVERLNSLVPEIVALK 180
Query: 171 SIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPL 230
+IAAYRSGL+I+ +V+K+ AE GL E LR+GKPVRI NK LIDYI SLEVA DLPL
Sbjct: 181 TIAAYRSGLDIDTYVSKEVAENGLVEVLRAGKPVRIGNKGLIDYILTISLEVAVRRDLPL 240
Query: 231 QIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290
QIHTGFGDKDLDLRLSNPLHLR +LEDKRF KCR VLLHA+YPFSKEAS+L+ VYPQVYL
Sbjct: 241 QIHTGFGDKDLDLRLSNPLHLRTLLEDKRFGKCRIVLLHAAYPFSKEASFLSSVYPQVYL 300
Query: 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350
DFGLA+PKLSV GM+SS+KELL+LA KKVMFSTD YASPETY+LGAK+AREV+F VL D
Sbjct: 301 DFGLAVPKLSVHGMVSSVKELLDLASIKKVMFSTDGYASPETYYLGAKKAREVIFLVLSD 360
Query: 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKDFASKDDM--HQIYLKKSDAFESDV 408
C DLS+ EAI+ AKDIF+ N+ FYK+N+ D +S ++ ++ +K+ D E
Sbjct: 361 ACASGDLSLMEAIDAAKDIFSRNSIGFYKLNIDT-DSSSPQNIISPKLKIKEPDVQEDSS 419
Query: 409 SLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGE 468
S +R+IWVD SGQ RCR V +RFN V K GVGLTFA MGMTS DGPA+ + L+G GE
Sbjct: 420 SFVRIIWVDTSGQQRCRAVQAQRFNRSVKKNGVGLTFASMGMTSFTDGPAEESKLTGVGE 479
Query: 469 IRLMPDLSTRWRIPWQKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAG 528
IRL+PDLST+ IPW KQE M++ADM LKPGE W YCPRE LR+V+++LK+EF+LV+NAG
Sbjct: 480 IRLVPDLSTKQTIPWTKQESMVLADMQLKPGEAWGYCPRETLRRVAKVLKDEFDLVMNAG 539
Query: 529 FEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAE 588
FE EFYLLK+V+REGKEE++P DF PYC+T+++DA SP+F +++ L SLNI VEQ HAE
Sbjct: 540 FENEFYLLKNVVREGKEEYMPFDFGPYCATSSFDAASPIFHDIVPALESLNIEVEQFHAE 599
Query: 589 AGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLS 648
+GKGQFE++LGHT+A+ AADNL++TREV+R+VARK GLLATFVPK+ DIGSGSHVHLS
Sbjct: 600 SGKGQFEVSLGHTIASHAADNLVYTREVIRSVARKQGLLATFVPKYDYCDIGSGSHVHLS 659
Query: 649 LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695
LW+NGENVF AS++SS HG+SSVGE+FMAGVL HL SILA AP+PN
Sbjct: 660 LWKNGENVFPASNNSSSHGISSVGEEFMAGVLFHLPSILAIIAPLPN 706
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| ASPGD|ASPL0000074483 fluG [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0280191 DDB_G0280191 "amidohydrolase 2 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0276835 glnA1 "glutamate-ammonia ligase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CHY_0712 CHY_0712 "glutamine synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
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| TIGR_CMR|BA_3833 BA_3833 "glutamine synthetase, type I" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0295755 glnA2 "glutamine synthetase type I" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5LQ88 SPO2607 "Gamma-glutamylisopropylamide synthetase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SPO_2607 SPO_2607 "gamma-glutamylisopropylamide synthetase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CHY_0704 CHY_0704 "glutamine synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 4.1.1.45 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.5.2 | LOW CONFIDENCE prediction! |
| 3rd Layer | 6.3.1.2 | 0.737 |
| 3rd Layer | 6.3.1 | 0.691 |
| 3rd Layer | 3.5.2.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 |
 |
 | eugene3.00280245 | hypothetical protein (831 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 698 | |||
| COG0174 | 443 | COG0174, GlnA, Glutamine synthetase [Amino acid tr | 1e-66 | |
| pfam00120 | 259 | pfam00120, Gln-synt_C, Glutamine synthetase, catal | 3e-56 | |
| TIGR03105 | 435 | TIGR03105, gln_synth_III, glutamine synthetase, ty | 3e-42 | |
| TIGR00653 | 459 | TIGR00653, GlnA, glutamine synthetase, type I | 3e-41 | |
| pfam04909 | 272 | pfam04909, Amidohydro_2, Amidohydrolase | 1e-21 | |
| COG2159 | 293 | COG2159, COG2159, Predicted metal-dependent hydrol | 4e-15 | |
| PRK09469 | 469 | PRK09469, glnA, glutamine synthetase; Provisional | 4e-13 | |
| COG3968 | 724 | COG3968, COG3968, Uncharacterized protein related | 3e-08 |
| >gnl|CDD|223252 COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 1e-66
Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 12/299 (4%)
Query: 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPA 458
E+ V + + + D +G R + +P ++ + + S++ G
Sbjct: 6 VLKLLKENGVKFVDLRFTDLNGVLRGKTIPAEKPVSV---LAQLFEGGVVFDGSSIAG-F 61
Query: 459 DGTNLSGTGEIRLMPDLSTRWRIPWQKQEE-MIMADMHLKPGEPWEYCPREALRKVSRLL 517
+G ++ L PDLST PW++ ++ D++ G P+ PR L++ L
Sbjct: 62 EGIG---ESDMVLKPDLSTLVVDPWREGPTARVLCDVYDPDGTPYPRDPRSVLKRALARL 118
Query: 518 KEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHS 577
K+E G E+EF+L + P D Y A D ++++ L +
Sbjct: 119 KDEGLAPAVVGPELEFFLFDRD-GRDPDGGRPADKGGYFDVAPLDEAEDFRRDIVEALEA 177
Query: 578 LNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALD 637
I +E +H E GQFEI L A KAAD ++ + V++ VA KHGL ATF+PK
Sbjct: 178 AGIEIEAIHHEVAPGQFEINLRFDDALKAADQIVIFKYVVKEVAEKHGLTATFMPKPFFG 237
Query: 638 DIGSGSHVHLSLW-QNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695
D GSG HVH SLW ++G N+F D G+S F+ G+L H ++ A TAP N
Sbjct: 238 DNGSGMHVHQSLWDKDGGNLFA--DEDGYAGLSETALHFIGGILKHAPALTAITAPTVN 294
|
Length = 443 |
| >gnl|CDD|215731 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|234109 TIGR03105, gln_synth_III, glutamine synthetase, type III | Back alignment and domain information |
|---|
| >gnl|CDD|233073 TIGR00653, GlnA, glutamine synthetase, type I | Back alignment and domain information |
|---|
| >gnl|CDD|218322 pfam04909, Amidohydro_2, Amidohydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|225070 COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|181884 PRK09469, glnA, glutamine synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226477 COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 698 | |||
| TIGR00653 | 460 | GlnA glutamine synthetase, type I. Alternate name: | 100.0 | |
| COG0174 | 443 | GlnA Glutamine synthetase [Amino acid transport an | 100.0 | |
| PRK09469 | 469 | glnA glutamine synthetase; Provisional | 100.0 | |
| TIGR03105 | 435 | gln_synth_III glutamine synthetase, type III. This | 100.0 | |
| PRK02925 | 466 | glucuronate isomerase; Reviewed | 100.0 | |
| PLN02284 | 354 | glutamine synthetase | 100.0 | |
| COG1904 | 463 | UxaC Glucuronate isomerase [Carbohydrate transport | 100.0 | |
| PF00120 | 259 | Gln-synt_C: Glutamine synthetase, catalytic domain | 100.0 | |
| PLN03036 | 432 | glutamine synthetase; Provisional | 100.0 | |
| PF02614 | 462 | UxaC: Glucuronate isomerase; InterPro: IPR003766 U | 100.0 | |
| KOG0683 | 380 | consensus Glutamine synthetase [Amino acid transpo | 99.92 | |
| COG2159 | 293 | Predicted metal-dependent hydrolase of the TIM-bar | 99.89 | |
| PF04909 | 273 | Amidohydro_2: Amidohydrolase; InterPro: IPR006992 | 99.74 | |
| COG3968 | 724 | Uncharacterized protein related to glutamine synth | 99.59 | |
| PF03951 | 84 | Gln-synt_N: Glutamine synthetase, beta-Grasp domai | 99.44 | |
| cd01311 | 263 | PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) | 99.38 | |
| COG3618 | 279 | Predicted metal-dependent hydrolase of the TIM-bar | 99.19 | |
| cd01310 | 251 | TatD_DNAse TatD like proteins; E.coli TatD is a cy | 99.02 | |
| TIGR00010 | 252 | hydrolase, TatD family. Several genomes have multi | 98.6 | |
| COG0418 | 344 | PyrC Dihydroorotase [Nucleotide transport and meta | 97.89 | |
| KOG4245 | 297 | consensus Predicted metal-dependent hydrolase of t | 97.89 | |
| cd00530 | 293 | PTE Phosphotriesterase (PTE) catalyzes the hydroly | 97.88 | |
| PRK10812 | 265 | putative DNAse; Provisional | 97.81 | |
| PRK11449 | 258 | putative deoxyribonuclease YjjV; Provisional | 97.72 | |
| TIGR02050 | 287 | gshA_cyan_rel uncharacterized enzyme. This family | 97.7 | |
| PRK13517 | 373 | carboxylate-amine ligase; Provisional | 97.69 | |
| PF01026 | 255 | TatD_DNase: TatD related DNase The Pfam entry find | 97.53 | |
| PRK13516 | 373 | gamma-glutamyl:cysteine ligase; Provisional | 97.44 | |
| PRK09875 | 292 | putative hydrolase; Provisional | 97.44 | |
| COG0084 | 256 | TatD Mg-dependent DNase [DNA replication, recombin | 97.36 | |
| cd01294 | 335 | DHOase Dihydroorotase (DHOase) catalyzes the rever | 97.25 | |
| PLN02611 | 482 | glutamate--cysteine ligase | 97.19 | |
| PRK13515 | 371 | carboxylate-amine ligase; Provisional | 97.17 | |
| PRK13518 | 357 | carboxylate-amine ligase; Provisional | 97.02 | |
| PRK10425 | 258 | DNase TatD; Provisional | 96.96 | |
| COG1099 | 254 | Predicted metal-dependent hydrolases with the TIM- | 96.77 | |
| TIGR02048 | 376 | gshA_cyano glutamate--cysteine ligase, cyanobacter | 96.51 | |
| PF02126 | 308 | PTE: Phosphotriesterase family; InterPro: IPR00155 | 96.48 | |
| cd01292 | 275 | metallo-dependent_hydrolases Superfamily of metall | 96.31 | |
| PRK05451 | 345 | dihydroorotase; Provisional | 96.29 | |
| PLN02599 | 364 | dihydroorotase | 96.09 | |
| PF04107 | 288 | GCS2: Glutamate-cysteine ligase family 2(GCS2); In | 95.83 | |
| TIGR01436 | 446 | glu_cys_lig_pln glutamate--cysteine ligase, plant | 95.67 | |
| TIGR00856 | 341 | pyrC_dimer dihydroorotase, homodimeric type. This | 95.51 | |
| COG1831 | 285 | Predicted metal-dependent hydrolase (urease superf | 95.38 | |
| COG2355 | 313 | Zn-dependent dipeptidase, microsomal dipeptidase h | 94.28 | |
| cd01302 | 337 | Cyclic_amidohydrolases Cyclic amidohydrolases, inc | 93.68 | |
| COG2170 | 369 | Uncharacterized conserved protein [Function unknow | 93.57 | |
| cd01297 | 415 | D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci | 93.32 | |
| KOG3020 | 296 | consensus TatD-related DNase [Replication, recombi | 93.26 | |
| KOG2902 | 344 | consensus Dihydroorotase [Nucleotide transport and | 93.1 | |
| cd01314 | 447 | D-HYD D-hydantoinases (D-HYD) also called dihydrop | 92.87 | |
| TIGR01975 | 389 | isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i | 92.01 | |
| PF01244 | 320 | Peptidase_M19: Membrane dipeptidase (Peptidase fam | 91.61 | |
| cd01301 | 309 | rDP_like renal dipeptidase (rDP), best studied in | 90.06 | |
| PRK09357 | 423 | pyrC dihydroorotase; Validated | 89.52 | |
| COG1735 | 316 | Php Predicted metal-dependent hydrolase with the T | 87.66 | |
| cd01307 | 338 | Met_dep_hydrolase_B Metallo-dependent hydrolases, | 87.55 | |
| cd01309 | 359 | Met_dep_hydrolase_C Metallo-dependent hydrolases, | 87.3 | |
| PLN02795 | 505 | allantoinase | 87.22 | |
| PLN02942 | 486 | dihydropyrimidinase | 86.93 | |
| TIGR03444 | 390 | gshA_related glutamate--cysteine ligase family pro | 85.1 | |
| PTZ00124 | 362 | adenosine deaminase; Provisional | 83.84 | |
| TIGR00857 | 411 | pyrC_multi dihydroorotase, multifunctional complex | 83.75 | |
| cd01315 | 447 | L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas | 82.75 | |
| PRK07369 | 418 | dihydroorotase; Provisional | 82.39 |
| >TIGR00653 GlnA glutamine synthetase, type I | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-68 Score=588.80 Aligned_cols=285 Identities=30% Similarity=0.451 Sum_probs=253.2
Q ss_pred hhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCCCccEEEEeecCCceec
Q 005411 402 DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (698)
Q Consensus 402 ~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~~~ 481 (698)
.+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++++.+++. + ....+.+|++|+||++|++++
T Consensus 6 ~l~~~~i~~v~~~~~Dl~G~~rgk~vp~~~~~~~~~~~G~~~~~~~~~------~----~~~~~~~D~~l~PD~~Tl~~~ 75 (460)
T TIGR00653 6 LIKEENVKFVDLRFTDIKGKPQHVEIPASALDKEAFEEGIMFDGSSIR------G----FQGIEESDMLLKPDPSTAVID 75 (460)
T ss_pred HHHhCCCcEEEEEEECCCCCEeeEEEeHHHhhHHHhcCCeeccccccc------c----cccCCCCcEEEeccCCcceec
Confidence 345688999999999999999999999999975345789988766541 1 111346799999999999999
Q ss_pred cCCC-CccEEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccC-----------------
Q 005411 482 PWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE----------------- 542 (698)
Q Consensus 482 Pw~~-~~a~V~~d~~~~-dg~p~~~cPR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~----------------- 542 (698)
||.+ ++++|+||+++. ||+|++.|||++|||++++++++.|+++++|+|+|||||+.....
T Consensus 76 pw~~~~~a~v~~d~~~~~dg~p~~~~PR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (460)
T TIGR00653 76 PWRAEKTLRVICDVYEPFTGEPYERDPRSIAKRAEEYLKSGIGDTAYFGPEPEFFLFDSVEFGSLANGSFYEVDSEEGRW 155 (460)
T ss_pred cCCCCCcEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHhCCCCceeEEcceEEEEEecCccCcccccceeeeccccccc
Confidence 9964 589999999998 999999999999999999998678999999999999999853211
Q ss_pred ----CCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHH
Q 005411 543 ----GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLR 618 (698)
Q Consensus 543 ----g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik 618 (698)
+...+.|.+.++||+..+++...+++++|++.|+++||+|+++|+|+|||||||++.|.++|+|||+++++|++||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~v~~~~~E~gpGQ~Ei~l~~~~~l~aAD~~~~~k~~ik 235 (460)
T TIGR00653 156 NEESGNRGYKPRDKGGYFPVAPTDTAVDIRREMVLYLEQLGFDVEVHHHEVATGQHEIDFKFDTLLKTADDIQTYKYVVK 235 (460)
T ss_pred cccCCcCCCcccCCccccCCCCcccHHHHHHHHHHHHHHcCCCceeeecCcCCCceeEecCCCCHHHHHHHHHHHHHHHH
Confidence 1123456666668888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeeeccccCCCCCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 005411 619 AVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 619 ~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
+||++||++|||||||+.+.+|||+|+|+|||++|+|+|. |++++.+||+++++||||||+|+++++||++||+|||+
T Consensus 236 ~vA~~~G~~ATFmpKP~~~~~GSG~H~H~Sl~d~g~n~F~--d~~~~~~lS~~~~~fiaGiL~h~~~l~a~~~PtvNSYk 313 (460)
T TIGR00653 236 NVARKHGKTATFMPKPLFGDNGSGMHCHQSLWKDGENLFA--GEEGYAGLSETALYYIGGILKHAKALAAFTNPTVNSYK 313 (460)
T ss_pred HHHHHhCCEEEEecccCCCCCcCceeEEECccCCCeeccC--CCCCCcccCHHHHHHHHHHHHHHHHhhhHhcCCCcchh
Confidence 9999999999999999999999999999999999999998 45566789999999999999999999999999999995
|
Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. |
| >COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09469 glnA glutamine synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR03105 gln_synth_III glutamine synthetase, type III | Back alignment and domain information |
|---|
| >PRK02925 glucuronate isomerase; Reviewed | Back alignment and domain information |
|---|
| >PLN02284 glutamine synthetase | Back alignment and domain information |
|---|
| >COG1904 UxaC Glucuronate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6 | Back alignment and domain information |
|---|
| >PLN03036 glutamine synthetase; Provisional | Back alignment and domain information |
|---|
| >PF02614 UxaC: Glucuronate isomerase; InterPro: IPR003766 Uronate isomerase (also known as glucuronate isomerase) catalyses the reaction D-glucuronate to D-fructuronate and also converts D-galacturonate to D-tagaturonate [] | Back alignment and domain information |
|---|
| >KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily [] | Back alignment and domain information |
|---|
| >COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only] | Back alignment and domain information |
|---|
| >PF03951 Gln-synt_N: Glutamine synthetase, beta-Grasp domain; InterPro: IPR008147 Glutamine synthetase (6 | Back alignment and domain information |
|---|
| >cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM) | Back alignment and domain information |
|---|
| >COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >cd01310 TatD_DNAse TatD like proteins; E | Back alignment and domain information |
|---|
| >TIGR00010 hydrolase, TatD family | Back alignment and domain information |
|---|
| >COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4245 consensus Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon | Back alignment and domain information |
|---|
| >PRK10812 putative DNAse; Provisional | Back alignment and domain information |
|---|
| >PRK11449 putative deoxyribonuclease YjjV; Provisional | Back alignment and domain information |
|---|
| >TIGR02050 gshA_cyan_rel uncharacterized enzyme | Back alignment and domain information |
|---|
| >PRK13517 carboxylate-amine ligase; Provisional | Back alignment and domain information |
|---|
| >PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition | Back alignment and domain information |
|---|
| >PRK13516 gamma-glutamyl:cysteine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK09875 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis | Back alignment and domain information |
|---|
| >PLN02611 glutamate--cysteine ligase | Back alignment and domain information |
|---|
| >PRK13515 carboxylate-amine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK13518 carboxylate-amine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK10425 DNase TatD; Provisional | Back alignment and domain information |
|---|
| >COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative | Back alignment and domain information |
|---|
| >PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3 | Back alignment and domain information |
|---|
| >cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
| >PRK05451 dihydroorotase; Provisional | Back alignment and domain information |
|---|
| >PLN02599 dihydroorotase | Back alignment and domain information |
|---|
| >PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6 | Back alignment and domain information |
|---|
| >TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type | Back alignment and domain information |
|---|
| >TIGR00856 pyrC_dimer dihydroorotase, homodimeric type | Back alignment and domain information |
|---|
| >COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids | Back alignment and domain information |
|---|
| >COG2170 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics | Back alignment and domain information |
|---|
| >KOG3020 consensus TatD-related DNase [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin | Back alignment and domain information |
|---|
| >TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA | Back alignment and domain information |
|---|
| >PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics | Back alignment and domain information |
|---|
| >PRK09357 pyrC dihydroorotase; Validated | Back alignment and domain information |
|---|
| >COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
| >cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
| >PLN02795 allantoinase | Back alignment and domain information |
|---|
| >PLN02942 dihydropyrimidinase | Back alignment and domain information |
|---|
| >TIGR03444 gshA_related glutamate--cysteine ligase family protein | Back alignment and domain information |
|---|
| >PTZ00124 adenosine deaminase; Provisional | Back alignment and domain information |
|---|
| >TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type | Back alignment and domain information |
|---|
| >cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) | Back alignment and domain information |
|---|
| >PRK07369 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 698 | ||||
| 2qpx_A | 376 | Crystal Structure Of Putative Metal-Dependent Hydro | 1e-27 | ||
| 3ng0_A | 473 | Crystal Structure Of Glutamine Synthetase From Syne | 3e-20 | ||
| 4hpp_A | 443 | Crystal Structure Of Novel Glutamine Synthase Homol | 3e-18 | ||
| 1hto_A | 477 | Crystallographic Structure Of A Relaxed Glutamine S | 1e-15 | ||
| 2bvc_A | 486 | Crystal Structure Of Mycobacterium Tuberculosis Glu | 2e-15 | ||
| 1f52_A | 468 | Crystal Structure Of Glutamine Synthetase From Salm | 5e-14 | ||
| 2gls_A | 469 | Refined Atomic Model Of Glutamine Synthetase At 3.5 | 6e-14 | ||
| 3o6x_A | 729 | Crystal Structure Of The Type Iii Glutamine Synthet | 8e-04 |
| >pdb|2QPX|A Chain A, Crystal Structure Of Putative Metal-Dependent Hydrolase (Yp_805737.1) From Lactobacillus Casei Atcc 334 At 1.40 A Resolution Length = 376 | Back alignment and structure |
|
| >pdb|3NG0|A Chain A, Crystal Structure Of Glutamine Synthetase From Synechocystis Sp. Pcc 6803 Length = 473 | Back alignment and structure |
| >pdb|4HPP|A Chain A, Crystal Structure Of Novel Glutamine Synthase Homolog Length = 443 | Back alignment and structure |
| >pdb|1HTO|A Chain A, Crystallographic Structure Of A Relaxed Glutamine Synthetase From Mycobacterium Tuberculosis Length = 477 | Back alignment and structure |
| >pdb|2BVC|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Glutamine Synthetase In Complex With A Transition State Mimic Length = 486 | Back alignment and structure |
| >pdb|1F52|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella Typhimurium Co-Crystallized With Adp Length = 468 | Back alignment and structure |
| >pdb|2GLS|A Chain A, Refined Atomic Model Of Glutamine Synthetase At 3.5 Angstroms Resolution Length = 469 | Back alignment and structure |
| >pdb|3O6X|A Chain A, Crystal Structure Of The Type Iii Glutamine Synthetase From Bacteroides Fragilis Length = 729 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei} Length = 376 | Back alignment and structure |
|---|
Score = 326 bits (837), Expect = e-106
Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 23/389 (5%)
Query: 4 EELREVVENIELVDGHAHNIVSLD---SSFPFIQSFSEATGP-ALSYAPYSLSFKRNLKN 59
++L E V+ + L+D H H ++ Q +EA L+ L++ L
Sbjct: 3 DDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYPLADTKNRLAYHGFLA- 61
Query: 60 IAELYGCDSSLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKK-HGLDWHKSL 118
+A+ + D+ G + F + +LID G D LD L
Sbjct: 62 LAKEFALDA--NNPLAAMNDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAEL 119
Query: 119 VPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIETFLKQLRSA-ANKIVGLKSIAAYR 176
V V I R+E AE+ + + + + F ++ A A+ VG KSIAAYR
Sbjct: 120 VGIPVKAIYRLETHAEDFMLEHDN------FAAWWQAFSNDVKQAKAHGFVGFKSIAAYR 173
Query: 177 SGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF 236
GL + P V +A G SG+ R+T+K LIDY+ D+PLQ H G+
Sbjct: 174 VGLHLEP-VNVIEAAAGFDTWKHSGEK-RLTSKPLIDYMLYHVAPFIIAQDMPLQFHVGY 231
Query: 237 GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAI 296
GD D D+ L NPL +R L+ + VLLH YP+ +EA YLA V+P +Y D L +
Sbjct: 232 GDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLHC-YPYHREAGYLASVFPNLYFDISL-L 289
Query: 297 PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDED 356
L G E +ELAP +++F++DA PE Y L A++ ++ + +
Sbjct: 290 DNLGPSGASRVFNEAVELAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQ---LPF 346
Query: 357 LSVGEAIEVAKDIFALNAAQFYKINLGVK 385
+ + + I +A+ Y ++
Sbjct: 347 VDLAQKKAWINAICWQTSAKLYHQERELR 375
|
| >2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Length = 421 | Back alignment and structure |
|---|
| >2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} SCOP: d.15.9.1 d.128.1.1 PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 1hto_A* 1htq_A* Length = 486 | Back alignment and structure |
|---|
| >3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} Length = 473 | Back alignment and structure |
|---|
| >1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Length = 468 | Back alignment and structure |
|---|
| >3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} Length = 729 | Back alignment and structure |
|---|
| >2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 | Back alignment and structure |
|---|
| >3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 | Back alignment and structure |
|---|
| >2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 | Back alignment and structure |
|---|
| >3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Length = 291 | Back alignment and structure |
|---|
| >3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Length = 272 | Back alignment and structure |
|---|
| >2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A* Length = 437 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* Length = 363 | Back alignment and structure |
|---|
| >3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} Length = 312 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 698 | |||
| 3qaj_A | 444 | Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G | 100.0 | |
| 4hpp_A | 443 | Probable glutamine synthetase; glutamine synthase | 100.0 | |
| 3ng0_A | 473 | Glutamine synthetase; GSI, nitrogen metabolism, sy | 100.0 | |
| 1f52_A | 468 | Glutamine synthetase; ADP, MPD, ligase; HET: ADP; | 100.0 | |
| 4acf_A | 486 | Glutamine synthetase 1; ligase, nucleotide-binding | 100.0 | |
| 2qpx_A | 376 | Predicted metal-dependent hydrolase of the TIM-BA; | 100.0 | |
| 2j9i_A | 421 | Glutamate-ammonia ligase domain-containing protein | 100.0 | |
| 3fky_A | 370 | Glutamine synthetase; beta-grAsp, catalytic domain | 100.0 | |
| 2ojw_A | 384 | Glutamine synthetase; amino-acid biosynthesis, lig | 100.0 | |
| 1j5s_A | 463 | Uronate isomerase; TM0064, structural genomics, JC | 100.0 | |
| 3iac_A | 473 | Glucuronate isomerase; IDP02065, structural genom | 100.0 | |
| 2d3a_A | 356 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A | 100.0 | |
| 2q01_A | 497 | Uronate isomerase; structural genomics, protein st | 100.0 | |
| 3o6x_A | 729 | Glutamine synthetase; type III, beta barrel,dodeca | 100.0 | |
| 2qee_A | 437 | BH0493 protein; amidohydrolase, structural genomic | 100.0 | |
| 3irs_A | 291 | Uncharacterized protein BB4693; structural genomic | 99.79 | |
| 3ij6_A | 312 | Uncharacterized metal-dependent hydrolase; structu | 99.61 | |
| 4do7_A | 303 | Amidohydrolase 2; enzyme function initiative, EFI, | 99.6 | |
| 3cjp_A | 272 | Predicted amidohydrolase, dihydroorotase family; s | 99.55 | |
| 4inf_A | 373 | Metal-dependent hydrolase; amidohydrolase, metal b | 99.54 | |
| 4d9a_A | 303 | 2-pyrone-4,6-dicarbaxylate hydrolase; structural g | 99.52 | |
| 3nur_A | 357 | Amidohydrolase; TIM barrel; 1.75A {Staphylococcus | 99.52 | |
| 2ffi_A | 288 | 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; | 99.5 | |
| 4i6k_A | 294 | Amidohydrolase family protein; enzyme function ini | 99.47 | |
| 2dvt_A | 327 | Thermophilic reversible gamma-resorcylate decarbo; | 99.44 | |
| 2f6k_A | 307 | Metal-dependent hydrolase; metal dependent hydroly | 99.44 | |
| 2wm1_A | 336 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxy | 99.39 | |
| 2hbv_A | 334 | 2-amino-3-carboxymuconate 6-semialdehyde decarbox; | 99.35 | |
| 4dzi_A | 423 | Putative TIM-barrel metal-dependent hydrolase; ami | 99.29 | |
| 2gwg_A | 350 | 4-oxalomesaconate hydratase; TIM-barrel like prote | 99.28 | |
| 2gzx_A | 265 | Putative TATD related DNAse; deoxyribonuclease, NE | 99.26 | |
| 1j6o_A | 268 | TATD-related deoxyribonuclease; structural genomic | 99.23 | |
| 1yix_A | 265 | Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW | 99.07 | |
| 1zzm_A | 259 | Putative deoxyribonuclease YJJV; hydrolaze, zinc, | 98.85 | |
| 1xwy_A | 264 | DNAse TATD, deoxyribonuclease TATD; TIM barrael, z | 98.81 | |
| 2y1h_A | 272 | Putative deoxyribonuclease tatdn3; hydrolase; 2.50 | 98.74 | |
| 1bf6_A | 291 | Phosphotriesterase homology protein; hypothetical | 98.44 | |
| 2xio_A | 301 | Putative deoxyribonuclease tatdn1; hydrolase; 1.19 | 98.41 | |
| 3rcm_A | 287 | TATD family hydrolase; HET: CIT; 2.05A {Pseudomona | 98.31 | |
| 3ovg_A | 363 | Amidohydrolase; structural genomics, PSI-2, protei | 98.24 | |
| 2vc7_A | 314 | Aryldialkylphosphatase; phosphotriesterase, promis | 98.22 | |
| 3pnz_A | 330 | Phosphotriesterase family protein; amidohydrolase | 98.1 | |
| 3k2g_A | 364 | Resiniferatoxin-binding, phosphotriesterase- relat | 98.03 | |
| 3gg7_A | 254 | Uncharacterized metalloprotein; structural genomic | 98.03 | |
| 3gtx_A | 339 | Organophosphorus hydrolase; mutant, amidohydrolase | 98.01 | |
| 2ob3_A | 330 | Parathion hydrolase; metalloenzyme, TIM barrel, ne | 97.93 | |
| 3rhg_A | 365 | Putative phophotriesterase; hydrolase, amidohydrol | 97.88 | |
| 3tn4_A | 360 | Phosphotriesterase; lactonase, hydrolase; HET: KCX | 97.83 | |
| 3guw_A | 261 | Uncharacterized protein AF_1765; alpha-beta protei | 97.82 | |
| 3ipw_A | 325 | Hydrolase TATD family protein; niaid, ssgcid, seat | 97.33 | |
| 2gwd_A | 449 | Glutamate cysteine ligase; disulfide bridges, glut | 96.96 | |
| 1r8g_A | 372 | Hypothetical protein YBDK; structural genomics, un | 96.85 | |
| 2z26_A | 347 | Dihydroorotase, dhoase; TIM barrel, hydrolase; HET | 96.53 | |
| 2i5g_A | 325 | Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, stru | 95.83 | |
| 3e2v_A | 401 | 3'-5'-exonuclease; structural genomics, hydrolase, | 95.79 | |
| 3ly0_A | 364 | Dipeptidase AC. metallo peptidase. merops family M | 92.6 | |
| 2vun_A | 386 | Enamidase; nicotinate degradation, binuclear metal | 91.08 | |
| 3pnu_A | 359 | Dihydroorotase; TIM barrel, zinc binding, hydrolas | 90.83 | |
| 3b40_A | 417 | PVDM, probable dipeptidase; structural genomics, h | 90.34 | |
| 1itu_A | 369 | Renal dipeptidase; glycoprotein, membrane-bound, z | 89.06 | |
| 3id7_A | 400 | Dipeptidase; streptomyces coelicolor A3(2), hydrol | 89.04 | |
| 2rag_A | 417 | Dipeptidase; aminohydrolase, structural genomics, | 88.14 | |
| 3neh_A | 318 | Renal dipeptidase family protein; structural genom | 87.23 | |
| 3gnh_A | 403 | L-lysine, L-arginine carboxypeptidase CC2672; N-me | 85.71 | |
| 2z00_A | 426 | Dihydroorotase; zinc binding protein, hydrolase, m | 85.63 | |
| 3hm7_A | 448 | Allantoinase; metallo-dependent hydrolase, protein | 85.35 | |
| 4gxw_A | 380 | Adenosine deaminase; amidohydrolase, COG1816, EFI, | 83.32 | |
| 2ics_A | 379 | Adenine deaminase; TIM barrel, binuclear zinc, ade | 80.92 |
| >4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} | Back alignment and structure |
|---|
| >1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A | Back alignment and structure |
|---|
| >4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A* | Back alignment and structure |
|---|
| >2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei} | Back alignment and structure |
|---|
| >2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
|---|
| >3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A | Back alignment and structure |
|---|
| >1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8 | Back alignment and structure |
|---|
| >3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0 | Back alignment and structure |
|---|
| >2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* | Back alignment and structure |
|---|
| >2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A* | Back alignment and structure |
|---|
| >3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A | Back alignment and structure |
|---|
| >3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
| >4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A | Back alignment and structure |
|---|
| >3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A* | Back alignment and structure |
|---|
| >3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15 | Back alignment and structure |
|---|
| >4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii} | Back alignment and structure |
|---|
| >2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A* | Back alignment and structure |
|---|
| >2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15 | Back alignment and structure |
|---|
| >2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens} | Back alignment and structure |
|---|
| >2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A | Back alignment and structure |
|---|
| >4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
| >2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15 | Back alignment and structure |
|---|
| >2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 | Back alignment and structure |
|---|
| >1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
| >1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
| >1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
| >2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 | Back alignment and structure |
|---|
| >2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} | Back alignment and structure |
|---|
| >3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* | Back alignment and structure |
|---|
| >2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* | Back alignment and structure |
|---|
| >3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 | Back alignment and structure |
|---|
| >3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} | Back alignment and structure |
|---|
| >3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0 | Back alignment and structure |
|---|
| >3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* | Back alignment and structure |
|---|
| >2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... | Back alignment and structure |
|---|
| >3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis} | Back alignment and structure |
|---|
| >3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* | Back alignment and structure |
|---|
| >3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
| >3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} | Back alignment and structure |
|---|
| >2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* | Back alignment and structure |
|---|
| >1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A | Back alignment and structure |
|---|
| >2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* | Back alignment and structure |
|---|
| >2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A | Back alignment and structure |
|---|
| >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} | Back alignment and structure |
|---|
| >3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
| >3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A* | Back alignment and structure |
|---|
| >3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A* | Back alignment and structure |
|---|
| >2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A | Back alignment and structure |
|---|
| >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} | Back alignment and structure |
|---|
| >4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} | Back alignment and structure |
|---|
| >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 698 | ||||
| d2qeec1 | 415 | c.1.9.8 (C:2-416) Uncharacterized protein BH0493 { | 6e-43 | |
| d1j5sa_ | 451 | c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga | 2e-33 | |
| d1f52a2 | 368 | d.128.1.1 (A:101-468) Glutamine synthetase, C-term | 3e-28 | |
| d2bvca2 | 374 | d.128.1.1 (A:105-478) Glutamine synthetase, C-term | 1e-22 | |
| d1bf6a_ | 291 | c.1.9.3 (A:) Phosphotriesterase homology protein { | 1e-05 | |
| d1f52a1 | 100 | d.15.9.1 (A:1-100) Glutamine synthetase, N-termina | 5e-05 | |
| d2bvca1 | 100 | d.15.9.1 (A:5-104) Glutamine synthetase, N-termina | 7e-04 |
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} Length = 415 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uncharacterized protein BH0493 species: Bacillus halodurans [TaxId: 86665]
Score = 158 bits (400), Expect = 6e-43
Identities = 61/436 (13%), Positives = 120/436 (27%), Gaps = 89/436 (20%)
Query: 4 EELREVVENIELVDGHAHNIVSLDSSFPF--------------------IQSFSEATGPA 43
E+++ V N + D H H S +
Sbjct: 10 EKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMS 69
Query: 44 LSY-------------APYSLSFKRNLKNIAELYG--CDSSLQAVEEYRRAAGLQSICSI 88
+P S + + L + L LQ EY +
Sbjct: 70 KREQADLIWEELFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDT 129
Query: 89 CFEAANISAVLIDDGLKLDKKHGLDWHKSLV-----PFVGRILRIERLAEEILDQASPDG 143
+ AN+S V++ + D + L LR++ L E
Sbjct: 130 VLQLANVSDVVMTNDPFDD----NERISWLEGKQPDSRFHAALRLDPLLNEYEQTK---- 181
Query: 144 SIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLE-----INPHVTKKDAEEGLAEDL 198
L+ N SI + L ++P +
Sbjct: 182 ----------HRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPE 231
Query: 199 RSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTG--------FGDKDLDLRLSNPLH 250
S + I L VA+ ++P + G GD + ++
Sbjct: 232 ES---------NRGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDG 282
Query: 251 LRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKE 310
+ +L + +F++ S E LA + + + G + + + +
Sbjct: 283 VEHLLR--EYPNNKFLVTMLSRENQHELVVLARKFSNLMIF-GCWWFMNNPEIINEMTRM 339
Query: 311 LLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-----EDLSVGEAIEV 365
+E+ T + +DA + ++ ++ VL D D +++ E
Sbjct: 340 RMEMLGTSFIPQHSDARVLEQLI-YKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRD 398
Query: 366 AKDIFALNAAQFYKIN 381
D+F+ N +F N
Sbjct: 399 VADLFSRNFWRFVGRN 414
|
| >d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima [TaxId: 2336]} Length = 451 | Back information, alignment and structure |
|---|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 368 | Back information, alignment and structure |
|---|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 374 | Back information, alignment and structure |
|---|
| >d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} Length = 291 | Back information, alignment and structure |
|---|
| >d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 100 | Back information, alignment and structure |
|---|
| >d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 100 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 698 | |||
| d1j5sa_ | 451 | Uronate isomerase TM0064 {Thermotoga maritima [Tax | 100.0 | |
| d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonell | 100.0 | |
| d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacte | 100.0 | |
| d2qeec1 | 415 | Uncharacterized protein BH0493 {Bacillus haloduran | 100.0 | |
| d1f52a1 | 100 | Glutamine synthetase, N-terminal domain {Salmonell | 99.71 | |
| d2bvca1 | 100 | Glutamine synthetase, N-terminal domain {Mycobacte | 99.68 | |
| d2dvta1 | 325 | Thermophilic reversible gamma-resorcylate decarbox | 99.59 | |
| d2f6ka1 | 306 | Putative amidohydrolase LP2961 {Lactobacillus plan | 99.58 | |
| d2gwga1 | 342 | 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas | 99.34 | |
| d2hbva1 | 331 | 2-amino-3-carboxymuconate 6-semialdehyde decarboxy | 99.31 | |
| d2ffia1 | 271 | Putative 2-pyrone-4,6-dicarboxylic acid hydrolase | 99.04 | |
| d1bf6a_ | 291 | Phosphotriesterase homology protein {Escherichia c | 98.63 | |
| d1i0da_ | 331 | Phosphotriesterase (parathion hydrolase, PTE) {Pse | 98.28 | |
| d1yixa1 | 265 | Putative deoxyribonuclease YcfH {Escherichia coli | 97.8 | |
| d1zzma1 | 259 | Putative deoxyribonuclease YjjV {Escherichia coli | 97.69 | |
| d1j6oa_ | 260 | Hypothetical protein TM0667 {Thermotoga maritima [ | 97.44 | |
| d1xwya1 | 260 | Deoxyribonuclease TatD (MttC) {Escherichia coli [T | 97.27 | |
| d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [T | 96.88 | |
| d1xrta2 | 310 | Two-domain dihydroorotase {Aquifex aeolicus [TaxId | 91.07 | |
| d1itua_ | 369 | Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 | 89.45 | |
| d2ftwa2 | 334 | Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli | 81.63 |
| >d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uronate isomerase TM0064 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.1e-57 Score=501.41 Aligned_cols=363 Identities=15% Similarity=0.107 Sum_probs=303.1
Q ss_pred HHHHHHhccCCccccCCCCcccCC-CCc-------------------------chhhcccccCCCC----C-CCCCcch-
Q 005411 4 EELREVVENIELVDGHAHNIVSLD-SSF-------------------------PFIQSFSEATGPA----L-SYAPYSL- 51 (698)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~-------------------------~~~~~~~ea~~~~----~-~~~~~~l- 51 (698)
.+|++.|+++||||+|||.....- .+. |.+.++++++... . +.++...
T Consensus 16 ~~Ly~~i~~~PIiD~H~Hl~p~~~~e~~~F~~i~~l~~~~DHY~~r~mr~~Gi~e~~itg~a~~~ekf~~~a~~~~~~~g 95 (451)
T d1j5sa_ 16 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG 95 (451)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred HHHHHHHhCCCEeCCCCCCCHHHHhhcCCCCCHHHHhccccHHHHHHHHHCCCCHHHccCCCCHHHHHHHHHHHhHHhcC
Confidence 478999999999999999654421 023 3334344332210 1 1222222
Q ss_pred --hHHHHHHHHHhhhCCCC-----CHHHHHHHHHHcChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhcc----
Q 005411 52 --SFKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP---- 120 (698)
Q Consensus 52 --~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~~---- 120 (698)
.+.|++++|+++|||+. ||++||+++|+..+++++|.||+++||+++|| |+||+++++||+.+..
T Consensus 96 nP~~~w~~~el~~~fgi~~~l~~~~a~~i~~~~n~~l~~~~~r~ll~~~~Ve~v~t----Tddp~D~L~~h~~~~~~~~~ 171 (451)
T d1j5sa_ 96 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG 171 (451)
T ss_dssp SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred ChhHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHhccccHHHHHHHhchheeec----cCCCCCchHHHHHhhcCCCC
Confidence 36789999999999986 89999999999656789999999999999999 8888999999998754
Q ss_pred -------CCCeEEecchHHH-HHHHhhC--CCCCcccHHHHHHHHHHHHHhhcccccceeeeeccccCCCCCCC--CCHH
Q 005411 121 -------FVGRILRIERLAE-EILDQAS--PDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAYRSGLEINPH--VTKK 188 (698)
Q Consensus 121 -------~~~~i~rie~~~~-~~~~~~~--~~~~~~~~~~~~~al~~~l~~~~~~~vgfksi~~y~~gl~~~~~--~~~~ 188 (698)
|||+++.|+...+ ++++++. +|.++.++++|++++++|++++ +.|++.||+||++..+. ++.+
T Consensus 172 ~rv~p~fRpD~~l~i~~~~f~~~~~~L~~~~g~~i~s~~~~~~aL~~r~~~f-----~~~G~~asdhGl~~~~~~~~~~~ 246 (451)
T d1j5sa_ 172 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEHF-----KEHGCVASDHALLEPSVYYVDEN 246 (451)
T ss_dssp CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHH-----HTTTCCEEEEEESSCCCCCCCHH
T ss_pred ceEecccchHhhhcccchhHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHH-----hcCceEEeccCccccccccCCHH
Confidence 6777777777655 7777773 6677899999999999999875 45666889999998876 6899
Q ss_pred HHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCC-------------CCCCCCCCCCccc---hH
Q 005411 189 DAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-------------DKDLDLRLSNPLH---LR 252 (698)
Q Consensus 189 ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G-------------~~~~~~~~~~p~~---L~ 252 (698)
+++++|++.++++.....+.+.+..++++.+.++|.++|||||+|+|++ |+|.|.....+.. |.
T Consensus 247 ~~~~if~k~~~g~~~s~~e~~~~~~~ll~~l~~~~~~~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~l~ 326 (451)
T d1j5sa_ 247 RARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEGLR 326 (451)
T ss_dssp HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCcceeeecccccccchHHHHhcCCCCccccccchHHHHHHHH
Confidence 9999999999876666777888999999999999999999999999995 5666654444432 33
Q ss_pred HHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEE-EecCCCCCcc
Q 005411 253 AILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPE 331 (698)
Q Consensus 253 ~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~P~ 331 (698)
.++.. .+|+.|+|+.|.++|+.+++++||++|||||+|.+|||++ +++||++++++++|++|++|++ |+||+|+||+
T Consensus 327 ~~L~~-~~~~~k~vL~~l~~~~~~e~a~la~~f~nv~~g~~wwf~d-~~~gm~~~l~~~~e~~~~sk~vg~~TDsr~f~s 404 (451)
T d1j5sa_ 327 YFLNE-FDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFND-SPFGMEMHLKYLASVDLLYNLAGMVTDSRKLLS 404 (451)
T ss_dssp HHHHH-STTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTC-SHHHHHHHHHHHHTTSCGGGCCCCCCCCSSTTH
T ss_pred HHHHh-cCCCCCEEEEeCCcccHHHHHHHHhcCCcceECCeeeEeC-cHHHHHHHHHHHHHhcCccceeeeecCcchhch
Confidence 33332 6799999999999999999999999999999999999975 6999999999999999999998 9999999998
Q ss_pred chhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005411 332 TYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (698)
Q Consensus 332 ~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (698)
+|+++++|||+||++|+++|++|++|.++|++++++|+|+||+++|
T Consensus 405 -~~~rh~~fRril~~~L~~~V~~G~~~~~~a~~i~~dI~y~Na~~~y 450 (451)
T d1j5sa_ 405 -FGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALF 450 (451)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHhc
Confidence 5789999999999999999999999999999999999999999998
|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]} | Back information, alignment and structure |
|---|
| >d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
| >d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} | Back information, alignment and structure |
|---|
| >d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|