Citrus Sinensis ID: 005419

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------
MGGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTPGSSGPSPSPSAAGRLSTVPLMKLLRLLLSCSLLLLFLTNS
ccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEcccEEEEEEcccccccEEEEEcccEEEEEEccccccccccccccccccccccccccccccccEEEEEEccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccEEEEEEcccccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccEEEEEccccccccEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEccccEEEEEEccccccccEEEEEEEEcccccccccccccccccccccccEEEEEccccccEEEEEcccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHEEEEEEccc
ccHHHHHHHHHHHHHHHHcHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHcccccccccccccccccccccccccccHcHHHHHHHHHHcccEEEccccccccccccccccccHHHHHHHHcHHHHHHHHccccccccccccccccccccccccccccccEEHEHcccccccccEccccccEEEEEEEcEEEEEEEccccccccEEEccccccEEcccHHHcccccccEEEEEEccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccccccEEEEEEccccccccccEEEEcccccEEEEEEcccccccccccccccHHHcccEEEEEEcccccccccEcccccccccccccccccccccccccEEEEEccccccEEEEccccccEEEEEEcccccEEEEEEEEcccccccEEccccccccccccccccccccccccccccEccccccccccccccEEEcEEEEccccccccccEEEEEEcccccEEEEEEcccccccEEEEEcccccccccccccccccccccccccEEEEEcEcccccEEEEEcccEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEEccc
MGGVLTTIFLFCYMMLLvdhstphplctnlrapftpkaplafcqyngsvccnsteDQQLQNQFkamnvsdsGCASLLKsircsrcdqfsselyrveskpkkvpvlcnstvsanstQSQRAAINFCSKVWdechnvsissspfslqgrdarlvnstskltdlwpsksafcnefggasgdglvcfdggpvslnssetpsppsglclekvgtgaylnmvphpdgsnrvflsnqdgktwlatvpepgsgskleldesnpfldltdQVHADVELGMmgiafhpnfqqngrffvsfncdkiiwpecsgrcscntdvgcdpsklgsdngampcqYHSVIAEFsangtktvqhssvasvkpLEVRRILTMGLhftshhggqilfgpedghlyfmvgdgegrgdpynfsqnKKSLLGKImrldvdkipsakeisdlglwgnysipadnpysedkqlqPEIWalgfrnpwrcsfdaerpsyflcadvgqdeyeevdivtkggnygwrvyegpfrynppsspggntsassinpifpvmgynhsevnkaegsasitggyfyrsqtdpcmygrylytDLYGAAvwagtenpensgnfsttklsvscdrdspiqcdtvkgssfpslgfitsfgqdnrkdIYLLasngvyrvvrpsrcnyncsqenvtaftpgssgpspspsaagrlstVPLMKLLRLLLSCSLLLLFLTNS
MGGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSElyrveskpkkvPVLCNStvsanstqsqRAAINFCSKVWDECHNVSIssspfslqgrDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSakeisdlglwGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDtvkgssfpsLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAftpgssgpspspSAAGRLSTVPLMKLLRLLLSCSLLLLFLTNS
MGGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTpgssgpspspsaagRLSTVPlmkllrlllscsllllflTNS
***VLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVE****KVPVLCNST*********RAAINFCSKVWDECHNVSISS**F*L****ARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGG***************LCLEKVGTGAYLNMVPH****NRVFLSNQDGKTWLA******************FLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRY****************PIFPVMGYNHSEVN**EGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGT***********************IQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQE***********************************************
****LTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTV******SQRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLN*****SPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQ***************************LMKLLRLLLSCSLLLLFLTNS
MGGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSL*********SGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANG**********SVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNP********SASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAF**************GRLSTVPLMKLLRLLLSCSLLLLFLTNS
*GGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNS*********QRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQ***VASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTPGSSGPSPSPSAAGRLSTVPLMKLLRLLLSCSLLLLFLTNS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHii
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MGGVLTTIFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTPGSSGPSPSPSAAGRLSTVPLMKLLRLLLSCSLLLLFLTNS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query697 2.2.26 [Sep-21-2011]
Q9SSG3695 HIPL1 protein OS=Arabidop yes no 0.892 0.894 0.648 0.0
Q94F08696 HIPL2 protein OS=Arabidop no no 0.915 0.916 0.575 0.0
Q96JK4 782 HHIP-like protein 1 OS=Ho no no 0.738 0.658 0.306 6e-63
Q6UWX4724 HHIP-like protein 2 OS=Ho no no 0.789 0.759 0.289 2e-57
Q14DK5 791 HHIP-like protein 1 OS=Mu yes no 0.737 0.649 0.295 1e-56
Q9D2G9717 HHIP-like protein 2 OS=Mu no no 0.754 0.733 0.287 4e-54
Q7TN16700 Hedgehog-interacting prot no no 0.638 0.635 0.237 2e-21
Q96QV1700 Hedgehog-interacting prot no no 0.639 0.637 0.231 8e-21
P13650478 Quinoprotein glucose dehy yes no 0.292 0.426 0.254 2e-09
P73001412 Uncharacterized protein s N/A no 0.258 0.436 0.259 4e-08
>sp|Q9SSG3|HIPL1_ARATH HIPL1 protein OS=Arabidopsis thaliana GN=HIPL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/635 (64%), Positives = 491/635 (77%), Gaps = 13/635 (2%)

Query: 25  PLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMNVSDSGCASLLKSIRCSR 84
           PLC++ RAP    + L+FC Y G  CCN+ +D  L  QF+AMN+SD GCAS++KSI C+ 
Sbjct: 25  PLCSDSRAPSEVNSTLSFCPYKGKTCCNTMKDTSLMKQFQAMNISDKGCASVVKSILCAN 84

Query: 85  CDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSISSSPF-- 142
           CD FSS+L+R  S  + VP+LCNST SANST+      NFCS+ W+ C NVSIS S F  
Sbjct: 85  CDPFSSDLFRDNSDQQSVPILCNSTSSANSTE------NFCSETWETCQNVSISGSLFAA 138

Query: 143 SLQGRDARLVN-STSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGPVSLNSSETP--SPP 199
           SLQGR     N + SKL DLW SK+ FC+ FGGAS +  VCF G PV+LN ++T    PP
Sbjct: 139 SLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVCFSGEPVALNDNDTTPDKPP 198

Query: 200 SGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDL 259
           SG+CLEK+G G+YLNMVPHPDGSNR F S Q G  +LA +P+  SG  L++D S+PF+D+
Sbjct: 199 SGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIPDQDSGGVLDVDPSSPFVDM 258

Query: 260 TDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGS 319
           TD++H D E GMMG+AFHP F QNGRFF SFNCDK  WP C+GRCSCN+DV CDPSKL  
Sbjct: 259 TDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGCTGRCSCNSDVNCDPSKLTP 318

Query: 320 DNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILFGPE 379
           D+G+ PCQY +VIAE++AN T +   S   + KP EVRRI TMGL FTSHH GQILFGP 
Sbjct: 319 DSGSQPCQYQTVIAEYTANSTSS-DPSKAKNAKPTEVRRIFTMGLPFTSHHAGQILFGP- 376

Query: 380 DGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADN 439
           DG+LYFM+GDG G  DPYNF+QNKKSLLGKIMRLDVD IPSA EIS +GLWGNYSIP DN
Sbjct: 377 DGYLYFMMGDGGGGADPYNFAQNKKSLLGKIMRLDVDNIPSASEISKMGLWGNYSIPKDN 436

Query: 440 PYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVY 499
           P+ EDK+L+PEIWA+G RNPWRCSFD+ RPSYF+CADVGQD YEEVD+++KGGNYGWRVY
Sbjct: 437 PFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTYEEVDLISKGGNYGWRVY 496

Query: 500 EGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYG 559
           EGP  ++P SSPGGNTS  S+NPIFPVMGYNHSEV+ +  SASITGGYFYRS+TDPC+ G
Sbjct: 497 EGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSASITGGYFYRSETDPCIAG 556

Query: 560 RYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFG 619
           RY+Y DLYG  VWAG E P NSG+F T + + SC  DSP++C    G+S  SLG++ SFG
Sbjct: 557 RYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKCSDSPGTSGLSLGYVFSFG 616

Query: 620 QDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTA 654
           +DN KDIYLL SNGVYRVVRPSRCN  CS+EN TA
Sbjct: 617 EDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTA 651

Arabidopsis thaliana (taxid: 3702)
>sp|Q94F08|HIPL2_ARATH HIPL2 protein OS=Arabidopsis thaliana GN=HIPL2 PE=1 SV=2 Back     alignment and function description
>sp|Q96JK4|HIPL1_HUMAN HHIP-like protein 1 OS=Homo sapiens GN=HHIPL1 PE=2 SV=2 Back     alignment and function description
>sp|Q6UWX4|HIPL2_HUMAN HHIP-like protein 2 OS=Homo sapiens GN=HHIPL2 PE=2 SV=1 Back     alignment and function description
>sp|Q14DK5|HIPL1_MOUSE HHIP-like protein 1 OS=Mus musculus GN=Hhipl1 PE=2 SV=1 Back     alignment and function description
>sp|Q9D2G9|HIPL2_MOUSE HHIP-like protein 2 OS=Mus musculus GN=Hhipl2 PE=2 SV=2 Back     alignment and function description
>sp|Q7TN16|HHIP_MOUSE Hedgehog-interacting protein OS=Mus musculus GN=Hhip PE=1 SV=2 Back     alignment and function description
>sp|Q96QV1|HHIP_HUMAN Hedgehog-interacting protein OS=Homo sapiens GN=HHIP PE=1 SV=3 Back     alignment and function description
>sp|P13650|DHGB_ACICA Quinoprotein glucose dehydrogenase B OS=Acinetobacter calcoaceticus GN=gdhB PE=1 SV=1 Back     alignment and function description
>sp|P73001|Y1608_SYNY3 Uncharacterized protein slr1608 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1608 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query697
224141337673 predicted protein [Populus trichocarpa] 0.965 1.0 0.734 0.0
255552810689 HIPL1 protein precursor, putative [Ricin 0.923 0.934 0.744 0.0
255540863698 HIPL1 protein precursor, putative [Ricin 0.936 0.935 0.707 0.0
297734050696 unnamed protein product [Vitis vinifera] 0.929 0.931 0.703 0.0
225456616724 PREDICTED: HIPL1 protein-like [Vitis vin 0.929 0.895 0.703 0.0
359473388 937 PREDICTED: HIPL1 protein-like [Vitis vin 0.934 0.694 0.665 0.0
296086453702 unnamed protein product [Vitis vinifera] 0.934 0.927 0.665 0.0
356516736694 PREDICTED: HIPL1 protein-like [Glycine m 0.892 0.896 0.692 0.0
356508614693 PREDICTED: HIPL1 protein-like [Glycine m 0.892 0.897 0.697 0.0
224133338697 predicted protein [Populus trichocarpa] 0.911 0.911 0.703 0.0
>gi|224141337|ref|XP_002324030.1| predicted protein [Populus trichocarpa] gi|222867032|gb|EEF04163.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1052 bits (2721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/685 (73%), Positives = 576/685 (84%), Gaps = 12/685 (1%)

Query: 8   IFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMN 67
           IFLFC M+LL  + + +PLCT+LR+PF PK+ LAFCQY+GSVCCNSTED +L  QFK++N
Sbjct: 1   IFLFCNMLLLTRYGSSYPLCTDLRSPFIPKSRLAFCQYSGSVCCNSTEDVELHKQFKSLN 60

Query: 68  VSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSK 127
           VSD GCASLLKS  CSRCD FS+ELYR+ S P+ VPVLCNSTVS NS+QSQ AA +FCS+
Sbjct: 61  VSDYGCASLLKSTLCSRCDPFSAELYRIVSAPRLVPVLCNSTVSVNSSQSQLAATDFCSR 120

Query: 128 VWDECHNVSISSSPFSLQGRDARLVNSTSKLTDLWPSKSAFCNEFGGASGDGLVCFDGGP 187
           VWDECHN+SIS+SPF++  +   +VNS+SKLT+LW SK AFCNEFGGAS DG VCFDGGP
Sbjct: 121 VWDECHNLSISNSPFAID-KGGSVVNSSSKLTELWESKGAFCNEFGGASDDGSVCFDGGP 179

Query: 188 VSLNSSETPSPPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSK 247
           VSLNSSE+PS PSG+CLEK+  G+YLNMV HPDGSNRVFL+NQ GK WLATVP  GSG  
Sbjct: 180 VSLNSSESPSLPSGICLEKIANGSYLNMVAHPDGSNRVFLANQPGKIWLATVPAEGSGET 239

Query: 248 LELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCN 307
           L LDESNPFLDLTD+V+ D  LGMMGIAFHPNF QNGRFF SFNCDK+ WPECSGRCSCN
Sbjct: 240 LGLDESNPFLDLTDEVYYDTALGMMGIAFHPNFHQNGRFFASFNCDKVKWPECSGRCSCN 299

Query: 308 TDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFT 367
           +D+GCDPSKL S+NGA PCQYHS+IAEFSANGT        +S   LEVRRI TMGL FT
Sbjct: 300 SDMGCDPSKLPSENGAQPCQYHSIIAEFSANGT--------SSQPSLEVRRIFTMGLPFT 351

Query: 368 SHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDL 427
           +HHGGQILFGPEDG+LYFM+GDG   GDPYNFSQ+KKSLLGKIMRLD+D IPS ++I+DL
Sbjct: 352 AHHGGQILFGPEDGYLYFMMGDGGSIGDPYNFSQDKKSLLGKIMRLDIDNIPSGQKITDL 411

Query: 428 GLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDI 487
           GLWGNYS+P DN +SEDK L+PEIWALG RNPWRCSFDAERPSYFLCADVGQD+YEEVD+
Sbjct: 412 GLWGNYSVPGDNAFSEDKGLEPEIWALGLRNPWRCSFDAERPSYFLCADVGQDQYEEVDL 471

Query: 488 VTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGY 547
           +TKGGNYGWRVYEG F Y+PP++PGGNTS SSINPIFPVMGYNHSEVN  EGSASITGGY
Sbjct: 472 ITKGGNYGWRVYEGQFLYHPPTAPGGNTSVSSINPIFPVMGYNHSEVNNEEGSASITGGY 531

Query: 548 FYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGS 607
           FYRS TDPCMYGRYL++DLY  A+WAGTENP++SGNF++TKL VSC  D+PI C T  GS
Sbjct: 532 FYRSMTDPCMYGRYLFSDLYAGAIWAGTENPKDSGNFTSTKLPVSCAHDTPIPCTTAAGS 591

Query: 608 SFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTPGSSGPSPSPS 667
           SFPSLGFI SFGQDNRKD ++LAS+GVYR+ RPSRC+Y CS ENVTA  P S        
Sbjct: 592 SFPSLGFIFSFGQDNRKDTFILASSGVYRIARPSRCSYVCSMENVTAPVPSSPS---PSP 648

Query: 668 AAGRLSTVPLMKLLRLLLSCSLLLL 692
           +AG+  + PL  LL +L S SLL+L
Sbjct: 649 SAGKRLSKPLTVLLNILFSASLLIL 673

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255552810|ref|XP_002517448.1| HIPL1 protein precursor, putative [Ricinus communis] gi|223543459|gb|EEF44990.1| HIPL1 protein precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255540863|ref|XP_002511496.1| HIPL1 protein precursor, putative [Ricinus communis] gi|223550611|gb|EEF52098.1| HIPL1 protein precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297734050|emb|CBI15297.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225456616|ref|XP_002266458.1| PREDICTED: HIPL1 protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473388|ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086453|emb|CBI32042.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356516736|ref|XP_003527049.1| PREDICTED: HIPL1 protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356508614|ref|XP_003523050.1| PREDICTED: HIPL1 protein-like [Glycine max] Back     alignment and taxonomy information
>gi|224133338|ref|XP_002321542.1| predicted protein [Populus trichocarpa] gi|222868538|gb|EEF05669.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query697
TAIR|locus:2027273695 AT1G74790 [Arabidopsis thalian 0.916 0.919 0.639 5.4e-237
TAIR|locus:2178027690 AT5G39970 [Arabidopsis thalian 0.921 0.930 0.605 1.2e-230
TAIR|locus:2172224696 HIPL2 "hipl2 protein precursor 0.896 0.897 0.586 3e-211
UNIPROTKB|Q96JK4 782 HHIPL1 "HHIP-like protein 1" [ 0.380 0.338 0.382 1.6e-59
RGD|1311698 791 Hhipl1 "HHIP-like 1" [Rattus n 0.395 0.348 0.365 6.1e-58
MGI|MGI:1919265 791 Hhipl1 "hedgehog interacting p 0.395 0.348 0.374 6.4e-58
ZFIN|ZDB-GENE-090306-3 820 hhipl1 "HHIP-like 1" [Danio re 0.327 0.278 0.379 5.5e-54
UNIPROTKB|F1NC92551 HHIPL1 "Uncharacterized protei 0.391 0.495 0.346 5.5e-53
ZFIN|ZDB-GENE-050419-214 866 si:ch211-136a13.1 "si:ch211-13 0.332 0.267 0.387 2.6e-52
UNIPROTKB|E2R888723 HHIPL2 "Uncharacterized protei 0.296 0.286 0.385 7e-51
TAIR|locus:2027273 AT1G74790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2285 (809.4 bits), Expect = 5.4e-237, P = 5.4e-237
 Identities = 417/652 (63%), Positives = 499/652 (76%)

Query:     8 IFLFCYMMLLVDHSTPHPLCTNLRAPFTPKAPLAFCQYNGSVCCNSTEDQQLQNQFKAMN 67
             +FLF ++      S   PLC++ RAP    + L+FC Y G  CCN+ +D  L  QF+AMN
Sbjct:     8 VFLFLFLSCFALSSWALPLCSDSRAPSEVNSTLSFCPYKGKTCCNTMKDTSLMKQFQAMN 67

Query:    68 VSDSGCASLLKSIRCSRCDQFSSELYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSK 127
             +SD GCAS++KSI C+ CD FSS+L+R  S  + VP+LCNST SANST+      NFCS+
Sbjct:    68 ISDKGCASVVKSILCANCDPFSSDLFRDNSDQQSVPILCNSTSSANSTE------NFCSE 121

Query:   128 VWDECHNVSISSSPF--SLQGRDARLVN-STSKLTDLWPSKSAFCNEFGGASGDGLVCFD 184
              W+ C NVSIS S F  SLQGR     N + SKL DLW SK+ FC+ FGGAS +  VCF 
Sbjct:   122 TWETCQNVSISGSLFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVCFS 181

Query:   185 GGPVSLNSSET-PS-PPSGLCLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEP 242
             G PV+LN ++T P  PPSG+CLEK+G G+YLNMVPHPDGSNR F S Q G  +LA +P+ 
Sbjct:   182 GEPVALNDNDTTPDKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIPDQ 241

Query:   243 GSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSG 302
              SG  L++D S+PF+D+TD++H D E GMMG+AFHP F QNGRFF SFNCDK  WP C+G
Sbjct:   242 DSGGVLDVDPSSPFVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGCTG 301

Query:   303 RCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTM 362
             RCSCN+DV CDPSKL  D+G+ PCQY +VIAE++AN T +   S   + KP EVRRI TM
Sbjct:   302 RCSCNSDVNCDPSKLTPDSGSQPCQYQTVIAEYTANSTSS-DPSKAKNAKPTEVRRIFTM 360

Query:   363 GLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAK 422
             GL FTSHH GQILFGP DG+LYFM+GDG G  DPYNF+QNKKSLLGKIMRLDVD IPSA 
Sbjct:   361 GLPFTSHHAGQILFGP-DGYLYFMMGDGGGGADPYNFAQNKKSLLGKIMRLDVDNIPSAS 419

Query:   423 EISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEY 482
             EIS +GLWGNYSIP DNP+ EDK+L+PEIWA+G RNPWRCSFD+ RPSYF+CADVGQD Y
Sbjct:   420 EISKMGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTY 479

Query:   483 EEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSAS 542
             EEVD+++KGGNYGWRVYEGP  ++P SSPGGNTS  S+NPIFPVMGYNHSEV+ +  SAS
Sbjct:   480 EEVDLISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSAS 539

Query:   543 ITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCD 602
             ITGGYFYRS+TDPC+ GRY+Y DLYG  VWAG E P NSG+F T + + SC  DSP++C 
Sbjct:   540 ITGGYFYRSETDPCIAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKCS 599

Query:   603 TVKGSSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTA 654
                G+S  SLG++ SFG+DN KDIYLL SNGVYRVVRPSRCN  CS+EN TA
Sbjct:   600 DSPGTSGLSLGYVFSFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTA 651
GO:0003824 "catalytic activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016901 "oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2178027 AT5G39970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172224 HIPL2 "hipl2 protein precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q96JK4 HHIPL1 "HHIP-like protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1311698 Hhipl1 "HHIP-like 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1919265 Hhipl1 "hedgehog interacting protein-like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090306-3 hhipl1 "HHIP-like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NC92 HHIPL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050419-214 si:ch211-136a13.1 "si:ch211-136a13.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2R888 HHIPL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SSG3HIPL1_ARATHNo assigned EC number0.64880.89230.8949yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XVII.828.1
hypothetical protein (673 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query697
pfam07995324 pfam07995, GSDH, Glucose / Sorbosone dehydrogenase 2e-25
COG2133399 COG2133, COG2133, Glucose/sorbosone dehydrogenases 1e-18
TIGR03606454 TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-depe 5e-10
>gnl|CDD|219689 pfam07995, GSDH, Glucose / Sorbosone dehydrogenase Back     alignment and domain information 
 Score =  107 bits (269), Expect = 2e-25
 Identities = 88/328 (26%), Positives = 124/328 (37%), Gaps = 107/328 (32%)

Query: 215 MVPHPDG-------SNRVFLSNQDGKTW--LATVPEPGSGSKLELDESNPFLDLTDQVHA 265
           +   PDG         R+ L + DGK    +A VPE                     V A
Sbjct: 6   LAFLPDGRLLVTERPGRLRLVDADGKLSTPVAGVPE---------------------VVA 44

Query: 266 DVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMP 325
             + G++ +A HP+F  N   ++S+                           G D G   
Sbjct: 45  RGQGGLLDVALHPDFATNRTIYLSYAE-------------------------GDDGGN-- 77

Query: 326 CQYHSVI--AEFSANGTKTVQHSSVASVKPLE-VRRILTM------GLHFTSHHGGQILF 376
               + +  A  S +GT             LE V  I         G HF    G +I F
Sbjct: 78  ---GTAVARARLSDDGTA------------LEDVEVIFRQIPKVSGGGHF----GSRIAF 118

Query: 377 GPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIP 436
           GP DG LY   GD   RGD  N +Q+  S LGKI+RL+ D              G  S+P
Sbjct: 119 GP-DGTLYITTGD---RGDRDN-AQDLSSHLGKILRLNPD--------------G--SVP 157

Query: 437 ADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGW 496
           ADNP+      +PEIW+ G RNP   +FD +    +   + G    +E++++  G NYGW
Sbjct: 158 ADNPFVGRGGAKPEIWSYGHRNPQGLAFDPDTGRLWA-HEHGPRGGDEINLIEPGKNYGW 216

Query: 497 RVYEGPFRYNPPSSPGGNTSASSINPIF 524
            V      Y+      G T      P++
Sbjct: 217 PVVSYGRNYSGAPIGEGTTRPGMEQPVY 244

Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold. Length = 324
>gnl|CDD|225044 COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|234278 TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-dependent, s-GDH family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 697
PF07995331 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: 100.0
TIGR03606454 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH 100.0
COG2133399 Glucose/sorbosone dehydrogenases [Carbohydrate tra 100.0
TIGR02604367 Piru_Ver_Nterm putative membrane-bound dehydrogena 100.0
PF03024167 Folate_rec: Folate receptor family; InterPro: IPR0 99.49
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 98.36
PLN02919 1057 haloacid dehalogenase-like hydrolase family protei 97.9
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 97.67
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 97.3
PLN029191057 haloacid dehalogenase-like hydrolase family protei 95.03
PRK11028330 6-phosphogluconolactonase; Provisional 93.84
COG2706346 3-carboxymuconate cyclase [Carbohydrate transport 93.61
KOG4659 1899 consensus Uncharacterized conserved protein (Rhs f 93.54
COG3386307 Gluconolactonase [Carbohydrate transport and metab 92.9
TIGR02604367 Piru_Ver_Nterm putative membrane-bound dehydrogena 92.58
PRK11028330 6-phosphogluconolactonase; Provisional 91.17
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 90.6
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 90.55
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 89.85
PF06977248 SdiA-regulated: SdiA-regulated; InterPro: IPR00972 89.17
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 88.95
COG3386307 Gluconolactonase [Carbohydrate transport and metab 88.57
COG4946668 Uncharacterized protein related to the periplasmic 88.41
PF07995331 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: 87.85
TIGR03606 454 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH 84.58
COG3391381 Uncharacterized conserved protein [Function unknow 84.02
PF06977248 SdiA-regulated: SdiA-regulated; InterPro: IPR00972 83.38
TIGR02658352 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. 82.52
TIGR02658352 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. 80.24
PF0143628 NHL: NHL repeat; InterPro: IPR001258 The NHL repea 80.01
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases Back     alignment and domain information 
Probab=100.00  E-value=3.2e-60  Score=508.66  Aligned_cols=322  Identities=33%  Similarity=0.584  Sum_probs=238.3

Q ss_pred             eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEee
Q 005419          213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNC  292 (697)
Q Consensus       213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs~  292 (697)
                      |.|+++|||  ||||+||.|+||+++  .+|+.       ..++.++. +|...+|+|||||||||+|.+|++|||+|+.
T Consensus         5 ~~~a~~pdG--~l~v~e~~G~i~~~~--~~g~~-------~~~v~~~~-~v~~~~~~gllgia~~p~f~~n~~lYv~~t~   72 (331)
T PF07995_consen    5 RSMAFLPDG--RLLVAERSGRIWVVD--KDGSL-------KTPVADLP-EVFADGERGLLGIAFHPDFASNGYLYVYYTN   72 (331)
T ss_dssp             EEEEEETTS--CEEEEETTTEEEEEE--TTTEE-------CEEEEE-T-TTBTSTTBSEEEEEE-TTCCCC-EEEEEEEE
T ss_pred             eEEEEeCCC--cEEEEeCCceEEEEe--CCCcC-------cceecccc-cccccccCCcccceeccccCCCCEEEEEEEc
Confidence            899999998  899999999999986  33431       22344553 6778899999999999999999999999997


Q ss_pred             cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCC---CCc
Q 005419          293 DKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHF---TSH  369 (697)
Q Consensus       293 ~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~---~~H  369 (697)
                      .....                            ....++|+||+.+..         .....+.++|++ ++|.   ..|
T Consensus        73 ~~~~~----------------------------~~~~~~v~r~~~~~~---------~~~~~~~~~l~~-~~p~~~~~~H  114 (331)
T PF07995_consen   73 ADEDG----------------------------GDNDNRVVRFTLSDG---------DGDLSSEEVLVT-GLPDTSSGNH  114 (331)
T ss_dssp             E-TSS----------------------------SSEEEEEEEEEEETT---------SCEEEEEEEEEE-EEES-CSSSS
T ss_pred             ccCCC----------------------------CCcceeeEEEeccCC---------ccccccceEEEE-EeCCCCCCCC
Confidence            52110                            013579999998643         123345666765 4554   679


Q ss_pred             cceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCC
Q 005419          370 HGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQP  449 (697)
Q Consensus       370 ~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p  449 (697)
                      +|++|.|+| ||+|||++||.++    ...+|+++++.||||||++||                +||.||||++.++...
T Consensus       115 ~g~~l~fgp-DG~LYvs~G~~~~----~~~~~~~~~~~G~ilri~~dG----------------~~p~dnP~~~~~~~~~  173 (331)
T PF07995_consen  115 NGGGLAFGP-DGKLYVSVGDGGN----DDNAQDPNSLRGKILRIDPDG----------------SIPADNPFVGDDGADS  173 (331)
T ss_dssp             -EEEEEE-T-TSEEEEEEB-TTT----GGGGCSTTSSTTEEEEEETTS----------------SB-TTSTTTTSTTSTT
T ss_pred             CCccccCCC-CCcEEEEeCCCCC----cccccccccccceEEEecccC----------------cCCCCCccccCCCceE
Confidence            999999999 9999999999886    257999999999999999998                7999999999889999


Q ss_pred             eEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeee
Q 005419          450 EIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGY  529 (697)
Q Consensus       450 EI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y  529 (697)
                      ||||+|||||+||+|||.++ +||++|||++.+||||+|++|+|||||.+++...+....  .... .....++.|++.|
T Consensus       174 ~i~A~GlRN~~~~~~d~~tg-~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~--~~~~-~~~~~~~~P~~~~  249 (331)
T PF07995_consen  174 EIYAYGLRNPFGLAFDPNTG-RLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPP--IGDA-PSCPGFVPPVFAY  249 (331)
T ss_dssp             TEEEE--SEEEEEEEETTTT-EEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS---ECTG-SS-TTS---SEEE
T ss_pred             EEEEeCCCccccEEEECCCC-cEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCc--cccc-cCCCCcCccceee
Confidence            99999999999999999987 699999999999999999999999999999876654321  0011 1123578999999


Q ss_pred             cCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCccccccccccc
Q 005419          530 NHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSF  609 (697)
Q Consensus       530 ~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~  609 (697)
                      +|.        .||+|+.||+|++||+|+|.||++|+..++||++..++.  +.....+.             ++    .
T Consensus       250 ~~~--------~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~--~~~~~~~~-------------~~----~  302 (331)
T PF07995_consen  250 PPH--------SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDED--GSVTEEEE-------------FL----G  302 (331)
T ss_dssp             TTT----------EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETT--EEEEEEEE-------------EC----T
T ss_pred             cCc--------cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecC--CCccceEE-------------cc----c
Confidence            763        899999999999999999999999999999999987543  32222211             11    1


Q ss_pred             CCCCceeeEEEcCCCcEEEEec--CeEEE
Q 005419          610 PSLGFITSFGQDNRKDIYLLAS--NGVYR  636 (697)
Q Consensus       610 ~~~grI~sf~ed~dGeLYvlts--~gIYR  636 (697)
                      ...+||++|+++|||+|||+++  +.|||
T Consensus       303 ~~~~r~~~v~~~pDG~Lyv~~d~~G~iyR  331 (331)
T PF07995_consen  303 GFGGRPRDVAQGPDGALYVSDDSDGKIYR  331 (331)
T ss_dssp             TSSS-EEEEEEETTSEEEEEE-TTTTEEE
T ss_pred             cCCCCceEEEEcCCCeEEEEECCCCeEeC
Confidence            2245999999999999999987  45998

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family Back     alignment and domain information
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain Back     alignment and domain information
>PF03024 Folate_rec: Folate receptor family; InterPro: IPR018143 This entry represents a domain found in folate receptors and at the N terminus of hedgehog-interacting proteins Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PLN02919 haloacid dehalogenase-like hydrolase family protein Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>PLN02919 haloacid dehalogenase-like hydrolase family protein Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown] Back     alignment and domain information
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] Back     alignment and domain information
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases Back     alignment and domain information
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family Back     alignment and domain information
>COG3391 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] Back     alignment and domain information
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain Back     alignment and domain information
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain Back     alignment and domain information
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query697
3ho4_A481 Crystal Structure Of Hedgehog-Interacting Protein ( 7e-22
3ho3_A481 Crystal Structure Of Hedgehog-interacting Protein ( 1e-21
2wft_A458 Crystal Structure Of The Human Hip Ectodomain Lengt 1e-21
2wg3_C463 Crystal Structure Of The Complex Between Human Hedg 2e-21
2wg4_B457 Crystal Structure Of The Complex Between Human Hedg 2e-21
3a9g_A354 Crystal Structure Of Pqq-Dependent Sugar Dehydrogen 5e-12
1cru_A454 Soluble Quinoprotein Glucose Dehydrogenase From Aci 2e-10
2ism_A352 Crystal Structure Of The Putative Oxidoreductase (G 2e-08
2g8s_A353 Crystal Structure Of The Soluble Aldose Sugar Dehyd 5e-08
3das_A347 Structure Of The Pqq-Bound Form Of Aldose Sugar Deh 1e-06
>pdb|3HO4|A Chain A, Crystal Structure Of Hedgehog-Interacting Protein (Hhip) Length = 481 Back     alignment and structure 
Iteration: 1

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 181/471 (38%), Gaps = 130/471 (27%)
Query: 202 LCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDL 259
            C+++V +G    +  +   DGS R+F+  ++G   + T PE   G   +     P+LD+
Sbjct: 25  FCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-PE---GEIFK----EPYLDI 76
Query: 260 TDQVHADV----ELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPS 315
              V + +    E G++ +AFHPN+++NG+ +VS+  ++  W                  
Sbjct: 77  HKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW------------------ 118
Query: 316 KLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQIL 375
                    P  +   + E+      TV   +   V     R  L +      H GGQ+L
Sbjct: 119 ------AIGPHDHILRVVEY------TVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLL 166
Query: 376 FGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVD----KIPSAKEISDLGLWG 431
           FGP DG LY ++GDG    D            G ++RLDVD     +P            
Sbjct: 167 FGP-DGFLYIILGDGXITLDDXEEXDGLSDFTGSVLRLDVDTDXCNVP------------ 213
Query: 432 NYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSY-----FLCADVGQDEYEEVD 486
            YSIP  NP+       PE++A G  +P RC+ D            LC+D          
Sbjct: 214 -YSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSD---------- 262
Query: 487 IVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAE----GSAS 542
                                  S G N S++ I  I     Y  SE +  E     +  
Sbjct: 263 -----------------------SNGKNRSSARILQIIKGKDYE-SEPSLLEFKPFSNGP 298
Query: 543 ITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCD--RDSPIQ 600
           + GG+ YR      +YG Y++ D               +GNF T + S      ++ P+ 
Sbjct: 299 LVGGFVYRGCQSERLYGSYVFGD--------------RNGNFLTLQQSPVTKQWQEKPLC 344
Query: 601 CDTVKGSSFPSLGFITSFGQDNRKDIYLLAS--------NG-VYRVVRPSR 642
             T         G I  FG+D   ++Y+L+S        NG +Y++V P R
Sbjct: 345 LGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSXTQTHNGKLYKIVDPKR 395
>pdb|3HO3|A Chain A, Crystal Structure Of Hedgehog-interacting Protein (hhip) Length = 481 Back     alignment and structure
>pdb|2WFT|A Chain A, Crystal Structure Of The Human Hip Ectodomain Length = 458 Back     alignment and structure
>pdb|2WG3|C Chain C, Crystal Structure Of The Complex Between Human Hedgehog- Interacting Protein Hip And Desert Hedgehog Without Calcium Length = 463 Back     alignment and structure
>pdb|3A9G|A Chain A, Crystal Structure Of Pqq-Dependent Sugar Dehydrogenase Apo-Form Length = 354 Back     alignment and structure
>pdb|1CRU|A Chain A, Soluble Quinoprotein Glucose Dehydrogenase From Acinetobacter Calcoaceticus In Complex With Pqq And Methylhydrazine Length = 454 Back     alignment and structure
>pdb|2ISM|A Chain A, Crystal Structure Of The Putative Oxidoreductase (Glucose Dehydrogenase) (Ttha0570) From Thermus Theromophilus Hb8 Length = 352 Back     alignment and structure
>pdb|2G8S|A Chain A, Crystal Structure Of The Soluble Aldose Sugar Dehydrogenase (Asd) From Escherichia Coli In The Apo-Form Length = 353 Back     alignment and structure
>pdb|3DAS|A Chain A, Structure Of The Pqq-Bound Form Of Aldose Sugar Dehydrogenase (Adh) From Streptomyces Coelicolor Length = 347 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query697
2wg3_C463 Hedgehog-interacting protein; lipoprotein, develop 2e-93
2ism_A352 Putative oxidoreductase; BL41XU spring-8, bladed b 6e-29
3das_A347 Putative oxidoreductase; aldose sugar dehydrogenas 1e-28
1cru_A454 Protein (soluble quinoprotein glucose dehydrogena; 2e-28
3a9g_A354 Putative uncharacterized protein; PQQ dependent de 3e-27
2g8s_A353 Glucose/sorbosone dehydrogenases; bladed beta-prop 1e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463 Back     alignment and structure
 Score =  296 bits (760), Expect = 2e-93
 Identities = 95/490 (19%), Positives = 167/490 (34%), Gaps = 105/490 (21%)

Query: 200 SGLCLEKVGTG--AYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFL 257
           +  C+++V +G    +  +   DGS R+F+  ++G   +  +   G           P+L
Sbjct: 2   NCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKI--LTPEGEIF------KEPYL 53

Query: 258 DLTDQVHADV----ELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCD 313
           D+   V + +    E G++ +AFHPN+++NG+ +VS+  +                    
Sbjct: 54  DIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN-------------------- 93

Query: 314 PSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQ 373
                      P  +   + E++ +            V     R  L +      H GGQ
Sbjct: 94  ----QERWAIGPHDHILRVVEYTVSRKNP------HQVDLRTARVFLEVAELHRKHLGGQ 143

Query: 374 ILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNY 433
           +LFGP DG LY ++GDG    D            G ++RLDVD                Y
Sbjct: 144 LLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCN---------VPY 193

Query: 434 SIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPS-----YFLCADVGQDEYEEVDI- 487
           SIP  NP+       PE++A G  +P RC+ D            LC+D          I 
Sbjct: 194 SIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARIL 253

Query: 488 -VTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGG 546
            + KG +Y                               ++ +          +  + GG
Sbjct: 254 QIIKGKDYESE--------------------------PSLLEFKPF------SNGPLVGG 281

Query: 547 YFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKG 606
           + YR      +YG Y++ D  G       ++P                ++ P+   T   
Sbjct: 282 FVYRGCQSERLYGSYVFGDRNG-NFLTLQQSPVTKQW-----------QEKPLCLGTSGS 329

Query: 607 SSFPSLGFITSFGQDNRKDIYLLASNGVYRVVRPSRCNYNCSQENVTAFTPGSSGPSPSP 666
                 G I  FG+D   ++Y+L+S+         +       +         +   P+ 
Sbjct: 330 CRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQ 389

Query: 667 SAAGRLSTVP 676
           +     S + 
Sbjct: 390 TLTSECSRLC 399
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Length = 352 Back     alignment and structure
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} Length = 347 Back     alignment and structure
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A Length = 454 Back     alignment and structure
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* Length = 354 Back     alignment and structure
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} Length = 353 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query697
2wg3_C463 Hedgehog-interacting protein; lipoprotein, develop 100.0
2g8s_A353 Glucose/sorbosone dehydrogenases; bladed beta-prop 100.0
1cru_A454 Protein (soluble quinoprotein glucose dehydrogena; 100.0
3das_A347 Putative oxidoreductase; aldose sugar dehydrogenas 100.0
3a9g_A354 Putative uncharacterized protein; PQQ dependent de 100.0
2ism_A352 Putative oxidoreductase; BL41XU spring-8, bladed b 100.0
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 98.55
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 98.51
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 98.5
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 98.5
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 98.44
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 98.37
4hw6_A433 Hypothetical protein, IPT/TIG domain protein; puta 98.34
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 98.33
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 98.3
3dr2_A305 Exported gluconolactonase; gluconolactonase SMP-30 98.27
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 98.25
3v64_C349 Agrin; beta propeller, laminin-G, signaling, prote 98.2
3v65_B386 Low-density lipoprotein receptor-related protein; 98.16
3tc9_A430 Hypothetical hydrolase; 6-bladed beta-propeller, i 98.13
3p5b_L400 Low density lipoprotein receptor variant; B-propel 98.08
3sov_A318 LRP-6, low-density lipoprotein receptor-related pr 98.04
3m0c_C791 LDL receptor, low-density lipoprotein receptor; pr 98.01
1ijq_A316 LDL receptor, low-density lipoprotein receptor; be 97.98
4a0p_A 628 LRP6, LRP-6, low-density lipoprotein receptor-rela 97.98
1npe_A267 Nidogen, entactin; glycoprotein, basement membrane 97.92
3s94_A 619 LRP-6, low-density lipoprotein receptor-related pr 97.84
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 97.81
3kya_A496 Putative phosphatase; structural genomics, joint c 97.79
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 97.76
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.72
1npe_A267 Nidogen, entactin; glycoprotein, basement membrane 97.63
3v65_B386 Low-density lipoprotein receptor-related protein; 97.63
3s94_A619 LRP-6, low-density lipoprotein receptor-related pr 97.63
3v64_C349 Agrin; beta propeller, laminin-G, signaling, prote 97.62
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 97.61
3m0c_C791 LDL receptor, low-density lipoprotein receptor; pr 97.59
4a0p_A 628 LRP6, LRP-6, low-density lipoprotein receptor-rela 97.53
3sov_A318 LRP-6, low-density lipoprotein receptor-related pr 97.52
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 97.45
1ijq_A316 LDL receptor, low-density lipoprotein receptor; be 97.41
3p5b_L400 Low density lipoprotein receptor variant; B-propel 97.41
4hw6_A433 Hypothetical protein, IPT/TIG domain protein; puta 97.37
1n7d_A699 LDL receptor, low-density lipoprotein receptor; fa 97.33
3sre_A355 PON1, serum paraoxonase; directed evolution, 6-bla 97.32
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 97.31
3tc9_A430 Hypothetical hydrolase; 6-bladed beta-propeller, i 97.29
2fp8_A322 Strictosidine synthase; six bladed beta propeller 97.2
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 97.15
2fp8_A322 Strictosidine synthase; six bladed beta propeller 97.02
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 97.0
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 96.97
3a9g_A354 Putative uncharacterized protein; PQQ dependent de 96.92
2p4o_A306 Hypothetical protein; putative lactonase, structur 96.89
3das_A347 Putative oxidoreductase; aldose sugar dehydrogenas 96.85
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.79
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 96.78
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 96.7
2ghs_A326 AGR_C_1268P; regucalcin, structural genomics, join 96.64
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.61
3kya_A496 Putative phosphatase; structural genomics, joint c 96.56
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.55
2ghs_A326 AGR_C_1268P; regucalcin, structural genomics, join 96.5
3dr2_A305 Exported gluconolactonase; gluconolactonase SMP-30 96.45
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 96.39
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.39
2p4o_A306 Hypothetical protein; putative lactonase, structur 96.33
1n7d_A699 LDL receptor, low-density lipoprotein receptor; fa 96.3
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.26
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 96.18
2qe8_A343 Uncharacterized protein; structural genomics, join 96.05
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 96.03
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 95.98
2qe8_A343 Uncharacterized protein; structural genomics, join 95.9
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 95.86
1tl2_A236 L10, protein (tachylectin-2); animal lectin, horse 95.77
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 95.71
2ism_A352 Putative oxidoreductase; BL41XU spring-8, bladed b 95.49
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 95.01
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 94.48
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 94.46
3qqz_A255 Putative uncharacterized protein YJIK; MCSG, PSI-2 94.29
2g8s_A353 Glucose/sorbosone dehydrogenases; bladed beta-prop 94.2
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 94.03
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 93.65
1cru_A 454 Protein (soluble quinoprotein glucose dehydrogena; 93.17
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 92.48
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 92.45
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 92.39
3qqz_A255 Putative uncharacterized protein YJIK; MCSG, PSI-2 90.79
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 90.76
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 89.12
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 89.06
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 88.81
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 88.15
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 87.44
4g56_B357 MGC81050 protein; protein arginine methyltransfera 87.08
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 87.06
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 87.04
3c75_H426 MADH, methylamine dehydrogenase heavy chain; coppe 86.97
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 86.93
4g56_B357 MGC81050 protein; protein arginine methyltransfera 85.85
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 85.55
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 85.49
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 85.07
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 84.93
3ow8_A321 WD repeat-containing protein 61; structural genomi 84.65
3sre_A355 PON1, serum paraoxonase; directed evolution, 6-bla 84.61
3ow8_A321 WD repeat-containing protein 61; structural genomi 84.22
2ymu_A577 WD-40 repeat protein; unknown function, two domain 83.49
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 83.43
3sjl_D386 Methylamine dehydrogenase heavy chain; MAUG, C-hem 83.41
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 83.29
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 82.99
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 81.72
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 81.43
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 81.34
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 80.53
2ymu_A577 WD-40 repeat protein; unknown function, two domain 80.4
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 80.29
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Back     alignment and structure
Probab=100.00  E-value=1.2e-66  Score=579.49  Aligned_cols=353  Identities=28%  Similarity=0.541  Sum_probs=271.1

Q ss_pred             CCCcEEEEEecCce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceee----ccCCcee
Q 005419          199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHA----DVELGMM  272 (697)
Q Consensus       199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~----~~e~GLL  272 (697)
                      +.||++|+||+||.  |.|+++|||++||||+||.|+||+++ + ++.  .    .+++++|+...+..    .+|+|||
T Consensus         1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll   72 (463)
T 2wg3_C            1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL   72 (463)
T ss_dssp             -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred             CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence            35899999999999  99999999988999999999999985 2 232  1    24578888654432    3599999


Q ss_pred             eeEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccC
Q 005419          273 GIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVK  352 (697)
Q Consensus       273 GiAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~  352 (697)
                      ||||||+|++|++|||+|+.....+.                      +  .+....++|+||+++..      ....++
T Consensus        73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~------~~~~~d  122 (463)
T 2wg3_C           73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRK------NPHQVD  122 (463)
T ss_dssp             EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTT------CTTSBC
T ss_pred             eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCC------CCCccC
Confidence            99999999999999999997543211                      0  01223579999998643      012345


Q ss_pred             CCceEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCC
Q 005419          353 PLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGN  432 (697)
Q Consensus       353 ~~~~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~  432 (697)
                      +.++++|+++..+...|+|++|+|+| ||+|||++||+++..++..++|++.+++|||||||+|+.         +.+++
T Consensus       123 ~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~  192 (463)
T 2wg3_C          123 LRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVP  192 (463)
T ss_dssp             GGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCS
T ss_pred             CCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------ccccc
Confidence            66778888865567789999999999 999999999998776666679999999999999999984         23469


Q ss_pred             ccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eEEEEEc-CCC-CceeeEEeccCCCCCcccccCCCCC
Q 005419          433 YSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPS-----YFLCADV-GQD-EYEEVDIVTKGGNYGWRVYEGPFRY  505 (697)
Q Consensus       433 YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~-----~L~~~Dv-G~d-~~EEIn~I~kG~NYGWP~~eG~~~~  505 (697)
                      |+||+||||++.+++++||||+||||||||+|||.+++     .+|++|+ |++ ..|||++|++|+||||+        
T Consensus       193 y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--------  264 (463)
T 2wg3_C          193 YSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE--------  264 (463)
T ss_dssp             CBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC--------
T ss_pred             CcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC--------
Confidence            99999999999999999999999999999999999762     5788999 665 47999999999999993        


Q ss_pred             CCCCCCCCCCCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCee
Q 005419          506 NPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFS  585 (697)
Q Consensus       506 ~p~~~p~g~~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~  585 (697)
                                        +|++.|+|+     .+ .||+|++||+|++||+|+|.||++|+. ++||++.+++.. +.|+
T Consensus       265 ------------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~  318 (463)
T 2wg3_C          265 ------------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQ  318 (463)
T ss_dssp             ------------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCE
T ss_pred             ------------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceee
Confidence                              489999874     23 799999999999999999999999995 899999876542 3455


Q ss_pred             EEEEeeccCCCCCcccccccccccCCCCceeeEEEcCCCcEEEEec---------CeEEEEecCCCC
Q 005419          586 TTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLAS---------NGVYRVVRPSRC  643 (697)
Q Consensus       586 ~~~i~f~~~~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts---------~gIYRIv~ps~c  643 (697)
                      .+.+.   .+.. +.+.      ...++||++|+++|||+|||+++         ++||||++|+++
T Consensus       319 ~~~~~---~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~  375 (463)
T 2wg3_C          319 EKPLC---LGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP  375 (463)
T ss_dssp             EEEEC---EEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred             EEEee---cCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence            44331   1110 1111      12468999999999999999996         249999998875
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} Back     alignment and structure
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A Back     alignment and structure
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} Back     alignment and structure
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* Back     alignment and structure
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Back     alignment and structure
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Back     alignment and structure
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Back     alignment and structure
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Back     alignment and structure
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Back     alignment and structure
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Back     alignment and structure
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Back     alignment and structure
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 Back     alignment and structure
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 Back     alignment and structure
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Back     alignment and structure
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* Back     alignment and structure
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Back     alignment and structure
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Back     alignment and structure
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Back     alignment and structure
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Back     alignment and structure
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} Back     alignment and structure
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Back     alignment and structure
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* Back     alignment and structure
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 Back     alignment and structure
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 Back     alignment and structure
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 Back     alignment and structure
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} Back     alignment and structure
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 697
d1crua_450 b.68.2.1 (A:) Soluble quinoprotein glucose dehydro 1e-21
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 450 Back     information, alignment and structure

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 96.2 bits (238), Expect = 1e-21
 Identities = 78/398 (19%), Positives = 133/398 (33%), Gaps = 59/398 (14%)

Query: 188 VSLNSSET-PSPPSGLCLEKVGTGAYLN----MVPHPDGSNRVFLSNQ-DGKTWLATVPE 241
           V L  S+   +       + + +   LN    ++  PD   +++L+ +  GK        
Sbjct: 2   VPLTPSQFAKAKSENFDKKVILSN--LNKPHALLWGPDN--QIWLTERATGKILRVN--- 54

Query: 242 PGSGSKLELDESNPFLDLTDQVH-ADVELGMMGIAFHPNFQQNGRFFVSFNCDKIIWPEC 300
           P SGS            + + V+ AD + G++G AFHP+F+ N   ++S        P+ 
Sbjct: 55  PESGSV------KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK---NPKS 105

Query: 301 SGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRIL 360
           + +   N                      ++I  ++ N +             LE    L
Sbjct: 106 TDKELPNQ---------------------TIIRRYTYNKSTDT----------LEKPVDL 134

Query: 361 TMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPS 420
             GL  +  H    L    D  +Y+ +GD       Y F  N+         L+  K   
Sbjct: 135 LAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELN-GKDYH 193

Query: 421 AKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQD 480
                 L L  + SIP DNP          I+ LG RNP   +F        L ++ G +
Sbjct: 194 TYMGKVLRLNLDGSIPKDNPSFNGV--VSHIYTLGHRNPQGLAFT--PNGKLLQSEQGPN 249

Query: 481 EYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGS 540
             +E++++ KGGNYGW    G    +  +    + +A+         G   +        
Sbjct: 250 SDDEINLIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKE 309

Query: 541 ASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENP 578
           +  TG  F                +            P
Sbjct: 310 SEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWP 347

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query697
d1crua_450 Soluble quinoprotein glucose dehydrogenase {Acinet 100.0
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 98.95
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 98.88
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 98.26
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 98.17
d1npea_263 Nidogen {Mouse (Mus musculus) [TaxId: 10090]} 98.03
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 97.93
d1ijqa1266 Low density lipoprotein (LDL) receptor {Human (Hom 97.91
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 97.64
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 97.42
d1npea_263 Nidogen {Mouse (Mus musculus) [TaxId: 10090]} 97.25
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 97.24
d1jofa_365 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu 97.02
d1ijqa1266 Low density lipoprotein (LDL) receptor {Human (Hom 96.98
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 96.89
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 96.47
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 96.33
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 96.2
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 96.0
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 94.95
d1crua_450 Soluble quinoprotein glucose dehydrogenase {Acinet 93.86
d1hzua2426 C-terminal (heme d1) domain of cytochrome cd1-nitr 93.76
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 92.4
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 91.51
d1v04a_340 Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory 91.26
d1jofa_365 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu 90.75
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 89.32
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.8e-56  Score=492.59  Aligned_cols=354  Identities=22%  Similarity=0.378  Sum_probs=255.5

Q ss_pred             CCCcEEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccce-eeccCCceeee
Q 005419          199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQV-HADVELGMMGI  274 (697)
Q Consensus       199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V-~~~~e~GLLGi  274 (697)
                      .++|++|+|++||.  |.|++.|||  ||||+|| .|+|++++ ++++..+.        +.++...+ ...+|+|||||
T Consensus        14 ~~~f~~~~ia~~L~~P~~la~~pdg--~llVter~~G~i~~v~-~~~g~~~~--------i~~~~~~~~~~~ge~GLLgi   82 (450)
T d1crua_          14 SENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGSVKT--------VFQVPEIVNDADGQNGLLGF   82 (450)
T ss_dssp             CTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCEEE--------EEECTTCCCCTTSSCSEEEE
T ss_pred             cCCcEEEEEECCCCCceEEEEeCCC--eEEEEEecCCEEEEEE-CCCCcEee--------cccCCccccccCCCCceeeE
Confidence            45899999999998  999999999  7999998 69999985 44443222        22332222 35689999999


Q ss_pred             EeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCC
Q 005419          275 AFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPL  354 (697)
Q Consensus       275 AfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~  354 (697)
                      ||||+|++|++||++|+.......   ..                     ......+|+|++.+..         .....
T Consensus        83 a~~Pdf~~n~~iYvsyt~~~~~~~---~~---------------------~~~~~~~v~~~~~~~~---------~~~~~  129 (450)
T d1crua_          83 AFHPDFKNNPYIYISGTFKNPKST---DK---------------------ELPNQTIIRRYTYNKS---------TDTLE  129 (450)
T ss_dssp             EECTTTTTSCEEEEEEEEECTTC-----C---------------------CSCEEEEEEEEEEETT---------TTEEE
T ss_pred             EeCCCCccCCEEEEEEecCCCCCc---cc---------------------ccccceEEEeeecccc---------ccccc
Confidence            999999999999999997643211   00                     0012467888888654         11223


Q ss_pred             ceEEEEeeccC-CCCccceeeEeCCCCCeEEEEecCCCCCCCCc---------------cccccccCCCceEEEEecCCC
Q 005419          355 EVRRILTMGLH-FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPY---------------NFSQNKKSLLGKIMRLDVDKI  418 (697)
Q Consensus       355 ~~r~Il~~~~P-~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~---------------~~aQn~~sl~GKILRIdvDg~  418 (697)
                      ..++|++ .+| ...|+||+|+|+| ||+|||++||.++...+.               ..+|+++++.||||||++|+ 
T Consensus       130 ~~~~i~~-~~p~~~~H~gg~l~fgp-DG~LYvs~Gd~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~Gkilri~~dg-  206 (450)
T d1crua_         130 KPVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG-  206 (450)
T ss_dssp             EEEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS-
T ss_pred             ceEEEee-cccccccccccceeEcC-CCCEEEEecCCCcccccccccccccccCcccccccccccccccCceEEeeccc-
Confidence            3445555 455 4679999999999 999999999988754321               14699999999999999998 


Q ss_pred             CcccccccccCCCCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCccc
Q 005419          419 PSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRV  498 (697)
Q Consensus       419 p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~  498 (697)
                                     ++|+||||++  +.++||||+||||||||+||+ ++ +||++|||++.+||||+|++|+|||||+
T Consensus       207 ---------------~~~~dnP~~~--~~~~ei~a~G~RNp~g~~~~p-~g-~l~~~e~G~~~~dEln~i~~G~nYGWP~  267 (450)
T d1crua_         207 ---------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGWPN  267 (450)
T ss_dssp             ---------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCTTT
T ss_pred             ---------------cccccccccc--cccceEEEeccccccceeecc-cc-eeeeccccccccccccccccccccCCce
Confidence                           7999999985  457899999999999999999 56 5999999999999999999999999999


Q ss_pred             ccCCCCCCCCC-----------CCCCCCCC---------------CCCCCccceeeecC----CccC---------CCCC
Q 005419          499 YEGPFRYNPPS-----------SPGGNTSA---------------SSINPIFPVMGYNH----SEVN---------KAEG  539 (697)
Q Consensus       499 ~eG~~~~~p~~-----------~p~g~~~~---------------~~~~~~~Pi~~y~H----~~~~---------~~~G  539 (697)
                      +||...++...           .+......               ....+.+|+.....    ...+         .-.+
T Consensus       268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  347 (450)
T d1crua_         268 VAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWP  347 (450)
T ss_dssp             CSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSS
T ss_pred             ecCCcCCCCcccCCcccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccCCCceeecc
Confidence            99876543210           00000000               00112233221100    0000         0124


Q ss_pred             CcccceeEeecCCC--CcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCCCCceee
Q 005419          540 SASITGGYFYRSQT--DPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFITS  617 (697)
Q Consensus       540 s~S~tGg~vYrG~~--fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~~grI~s  617 (697)
                      +.|++|+.||+|.+  ||+|+|.+|+++|..++|+++..+++... ...+.+.                 .....+||++
T Consensus       348 siapsg~~fY~g~~~~fp~~~g~lfvg~l~~~~i~~v~~~~~~~~-~~~~~~~-----------------~~~~~~R~rd  409 (450)
T d1crua_         348 TVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYST-TYDDAVP-----------------MFKSNNRYRD  409 (450)
T ss_dssp             CCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSSS-EEEEEEE-----------------ESCCSSCEEE
T ss_pred             cccCccceEecCCcccCcccCCCEEEEECcCCEEEEEEEcCCCce-eeEEEEe-----------------ccCCCCCceE
Confidence            56999999999964  99999999999999999999988765432 2222221                 0123589999


Q ss_pred             EEEcCCCc-EEEEecC--eEEE
Q 005419          618 FGQDNRKD-IYLLASN--GVYR  636 (697)
Q Consensus       618 f~ed~dGe-LYvlts~--gIYR  636 (697)
                      ++++|||+ |||++++  .|||
T Consensus       410 v~~gpDGs~lyv~~d~~G~i~r  431 (450)
T d1crua_         410 VIASPDGNVLYVLTDTAGNVQK  431 (450)
T ss_dssp             EEECTTSSCEEEEECSSCCEEC
T ss_pred             EEECCCCCEEEEEECCCCCEec
Confidence            99999998 7899873  4887
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure