Citrus Sinensis ID: 005444
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 696 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M111 | 809 | Sucrose synthase 3 OS=Ara | yes | no | 0.885 | 0.761 | 0.875 | 0.0 | |
| O24301 | 809 | Sucrose synthase 2 OS=Pis | N/A | no | 0.880 | 0.757 | 0.874 | 0.0 | |
| Q10LP5 | 809 | Sucrose synthase 4 OS=Ory | yes | no | 0.889 | 0.765 | 0.835 | 0.0 | |
| Q00917 | 807 | Sucrose synthase 2 OS=Ara | no | no | 0.883 | 0.762 | 0.809 | 0.0 | |
| Q42652 | 766 | Sucrose synthase (Fragmen | N/A | no | 0.886 | 0.805 | 0.819 | 0.0 | |
| Q41608 | 805 | Sucrose synthase 1 OS=Tul | N/A | no | 0.882 | 0.762 | 0.771 | 0.0 | |
| P13708 | 805 | Sucrose synthase OS=Glyci | no | no | 0.885 | 0.765 | 0.743 | 0.0 | |
| P49035 | 808 | Sucrose synthase isoform | N/A | no | 0.886 | 0.763 | 0.746 | 0.0 | |
| P30298 | 808 | Sucrose synthase 2 OS=Ory | no | no | 0.885 | 0.762 | 0.740 | 0.0 | |
| P31924 | 816 | Sucrose synthase 1 OS=Ory | no | no | 0.885 | 0.754 | 0.743 | 0.0 |
| >sp|Q9M111|SUS3_ARATH Sucrose synthase 3 OS=Arabidopsis thaliana GN=SUS3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/616 (87%), Positives = 575/616 (93%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSISRLQ LSKAEDH+SKL +TPFS+FEY LQGMGFEKGWGDTA VLEMM
Sbjct: 194 LMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEKGWGDTAGRVLEMM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLL DILQAPDPS+LEKFLG +PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE EMLLRIKRQGLDISP ILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK
Sbjct: 314 ALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWPYLE + +D SEI ELQG PDFIIGNYSDGNLVASL+A++MG+TQ
Sbjct: 374 GILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNLVASLMAHRMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWK FD KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE+ +RLTALHGSIE++
Sbjct: 494 GQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEETRRLTALHGSIEEM 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ P+Q DEHVGTLSDRSKPI+FSMARLD VKN++GLVE Y KN++LRELVNLVV+AG I
Sbjct: 554 LYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAGNI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DVNKSKDREEI EIEKMH LMK YKLDGQFRWI AQTNRARNGELYRYIADT+GAF QPA
Sbjct: 614 DVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG SGFHIDPYHP+QA +MADFF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+P+HWKK+SD GL+RIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFRDLVK+VP +++
Sbjct: 794 LKFRDLVKTVPSTADD 809
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Modulates metabolic homeostasis and direct carbon towards starch synthesis in developing seeds. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/613 (87%), Positives = 578/613 (94%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSIS+LQS+L KAEDHLSKL PDT +S+FEY LQG GFE+GWGDTA VLEMM
Sbjct: 195 LMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGTGFERGWGDTAARVLEMM 254
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPSTLE FLGR+PMVFNVVILSPHG+FGQANVLGLPDTGGQVVYILDQVR
Sbjct: 255 HLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVR 314
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE+EML+RIK+QGLD +P+ILIVTRLIPDAKGTTCNQRLERVSGTE+THILRVPFRSEK
Sbjct: 315 ALESEMLVRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSEK 374
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWP+LETF EDV SEI AELQ +PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 375 GILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQ 434
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKF++KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT+
Sbjct: 435 CTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTI 494
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K+KRLTALH SIE+L
Sbjct: 495 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKEKRLTALHSSIEKL 554
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ EQ DE++G+L+DRSKPI+FSMARLD VKN+TGLVE Y KNS+LRELVNLVVVAGYI
Sbjct: 555 LYGTEQTDEYIGSLTDRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYI 614
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KS DREEI EIEKMH+LMK Y L+G+FRWI AQTNRARNGELYRYIADTKGAFVQPA
Sbjct: 615 DVKKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPA 674
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQA+EL+ DFF +CK
Sbjct: 675 FYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCK 734
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+P+HW K+SDGGL+RIYERYTWKIYSERLMTLAGVY FWKYVSKLERRETRRYLEMFYI
Sbjct: 735 EDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYI 794
Query: 679 LKFRDLVKSVPLA 691
LKFRDL SVP+A
Sbjct: 795 LKFRDLANSVPIA 807
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q10LP5|SUS4_ORYSJ Sucrose synthase 4 OS=Oryza sativa subsp. japonica GN=SUS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/621 (83%), Positives = 573/621 (92%)
Query: 76 AQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 135
++MLNDRIQS+ RLQS L+KAE+HLSKLP DTP+SQF Y Q G EKGWGDTA +VL
Sbjct: 189 GHVMMLNDRIQSLGRLQSVLTKAEEHLSKLPADTPYSQFAYKFQEWGLEKGWGDTAGYVL 248
Query: 136 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 195
EM+HLLLD+LQAPDPSTLE FLGR+PM+FNVV++SPHGYFGQANVLGLPDTGGQ+VYILD
Sbjct: 249 EMIHLLLDVLQAPDPSTLETFLGRIPMIFNVVVVSPHGYFGQANVLGLPDTGGQIVYILD 308
Query: 196 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 255
QVRALENEM+LR+K+QGLD +PKILIVTRLIP+AKGT+CNQRLER+SGT+HT+ILRVPFR
Sbjct: 309 QVRALENEMVLRLKKQGLDFTPKILIVTRLIPEAKGTSCNQRLERISGTQHTYILRVPFR 368
Query: 256 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 315
+E GILR+WISRFDVWPYLE F ED EI AELQG PDFIIGNYSDGNLVASLL+YKMG
Sbjct: 369 NENGILRKWISRFDVWPYLEKFAEDAAGEIAAELQGTPDFIIGNYSDGNLVASLLSYKMG 428
Query: 316 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375
ITQC IAHALEKTKYPDSDIYW K+DEKYHFSCQFTAD+IAMNNADFIITSTYQEIAG+K
Sbjct: 429 ITQCNIAHALEKTKYPDSDIYWTKYDEKYHFSCQFTADIIAMNNADFIITSTYQEIAGSK 488
Query: 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435
NTVGQYESHTAFTLPGLYR+VHGIDVFDPKFNIVSPGADM IYFPY+EK KRLT+LHGS+
Sbjct: 489 NTVGQYESHTAFTLPGLYRIVHGIDVFDPKFNIVSPGADMSIYFPYTEKAKRLTSLHGSL 548
Query: 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495
E L+ DPEQNDEH+G L DRSKPI+FSMARLD VKN+TGLVE Y KN++LRELVNLVVVA
Sbjct: 549 ENLISDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAYAKNARLRELVNLVVVA 608
Query: 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 555
GY DV KSKDREEIAEIEKMHEL+KTY L GQFRWI+AQTNRARNGELYRYIADT GAFV
Sbjct: 609 GYNDVKKSKDREEIAEIEKMHELIKTYNLFGQFRWISAQTNRARNGELYRYIADTHGAFV 668
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615
QPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQAA L+ADFF
Sbjct: 669 QPAFYEAFGLTVVEAMTCGLPTFATVHGGPAEIIEHGISGFHIDPYHPDQAANLIADFFE 728
Query: 616 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 675
+CK++P+HW ++S+ GL+RIYE+YTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM
Sbjct: 729 QCKQDPNHWVEVSNRGLQRIYEKYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 788
Query: 676 FYILKFRDLVKSVPLASENQH 696
FYILKFR+L K+VPLA + H
Sbjct: 789 FYILKFRELAKTVPLAVDEAH 809
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q00917|SUS2_ARATH Sucrose synthase 2 OS=Arabidopsis thaliana GN=SUS2 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/615 (80%), Positives = 557/615 (90%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
+MLNDRIQ+I LQ +L++AE+ LSKLP TP+S+FE+ LQGMGFE+GWGDTA+ V EM+
Sbjct: 191 MMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQKVSEMV 250
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 251 HLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 310
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRI++QGL++ PKILIVTRL+P+AKGTTCNQRLERVSGTEH HILR+PFR+EK
Sbjct: 311 ALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRTEK 370
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWPYLETF ED +EI+AELQG P+ IIGNYSDGNLVASLLA K+G+ Q
Sbjct: 371 GILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQ 430
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
C IAHALEKTKYP+SDIYW+ ++KYHFS QFTADLIAMNNADFIITSTYQEIAG+KN V
Sbjct: 431 CNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNV 490
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K++RLTALH SIE+L
Sbjct: 491 GQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEEL 550
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LF EQNDEHVG LSD+SKPI+FSMARLD VKN+TGLVECY KNS+LREL NLV+V GYI
Sbjct: 551 LFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYI 610
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
D N+S+DREE+AEI+KMH L++ Y L G+FRWIAAQ NRARNGELYRYIADTKG FVQPA
Sbjct: 611 DENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPA 670
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+G SGFHIDPYHPDQ A + FF C
Sbjct: 671 FYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCN 730
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
NP+HW KIS+GGLKRIYERYTWK YSERL+TLAGVY FWK+VSKLERRETRRYLEMFY
Sbjct: 731 TNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYS 790
Query: 679 LKFRDLVKSVPLASE 693
LKFRDL S+PLA++
Sbjct: 791 LKFRDLANSIPLATD 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/619 (81%), Positives = 559/619 (90%), Gaps = 2/619 (0%)
Query: 78 LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEM 137
++MLNDRIQ+I RLQS+LSKAED+L KLP DTP+S+FE+V+QGMGFE+GWGDTAE VLEM
Sbjct: 136 VMMLNDRIQTIQRLQSALSKAEDYLIKLPADTPYSEFEFVIQGMGFERGWGDTAERVLEM 195
Query: 138 MHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQV 197
MHLLLDILQAPDPSTLE FLGRLPMVFNVVILS HGYFGQA+VLGLPDTGGQ+VYILDQV
Sbjct: 196 MHLLLDILQAPDPSTLETFLGRLPMVFNVVILSVHGYFGQAHVLGLPDTGGQIVYILDQV 255
Query: 198 RALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSE 257
R+LE+EML RIK+QGLD++P+ILIV+RLIPDAKGTTCNQR+E+VSGTEH ILRVPFRSE
Sbjct: 256 RSLEHEMLQRIKKQGLDVTPRILIVSRLIPDAKGTTCNQRMEKVSGTEHASILRVPFRSE 315
Query: 258 KGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT 317
KGILR+WISRFDVWPYLETFTED EI ELQG PD IIGNYSDGN+VASLL++KMG+T
Sbjct: 316 KGILRKWISRFDVWPYLETFTEDAAGEIIGELQGRPDLIIGNYSDGNIVASLLSHKMGVT 375
Query: 318 QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 377
QC IAHALEKTKYPDSDIYWK+F++KYHFSCQF+ADL+AMN+ADFIITSTYQEIAGTKNT
Sbjct: 376 QCNIAHALEKTKYPDSDIYWKRFEDKYHFSCQFSADLMAMNHADFIITSTYQEIAGTKNT 435
Query: 378 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ-KRLTALHGSIE 436
VGQYESH AFT PGLYRVVHGIDVFDPKFNIVSPGADM IYFP+SEK LT+LH IE
Sbjct: 436 VGQYESHKAFTFPGLYRVVHGIDVFDPKFNIVSPGADMAIYFPFSEKDVTCLTSLHRLIE 495
Query: 437 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAG 496
QLLF PEQN+EH+G L D SKPI+FSMARLD VKN+TGLVECYGKN++LREL NLVVVAG
Sbjct: 496 QLLFKPEQNEEHIGVLDDTSKPIIFSMARLDRVKNITGLVECYGKNAKLRELANLVVVAG 555
Query: 497 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ 556
Y DV KS DREEIAEIEKMH L++ Y L GQFRWIA+QTNR RNGELYRYI D G F Q
Sbjct: 556 YNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGELYRYICDKGGIFAQ 615
Query: 557 PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGK 616
PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE G SGFHIDPYH DQ AE M +FF K
Sbjct: 616 PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVK 674
Query: 617 CKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMF 676
C+E+P++W KIS GGL RI ERYTW+ YSERLMTLAGVYGFWKYVSKLERRETRRYLEMF
Sbjct: 675 CREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMF 734
Query: 677 YILKFRDLVKSVPLASENQ 695
YILKFRDL SVPLA++ +
Sbjct: 735 YILKFRDLANSVPLATDEE 753
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q41608|SUS1_TULGE Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/617 (77%), Positives = 545/617 (88%), Gaps = 3/617 (0%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDR+QS+S LQ++L KA+ +L + DTP+S+F + Q +G EKGWGDTA V E +
Sbjct: 191 LMLNDRLQSLSALQTALRKADRYLLSISKDTPYSEFNHSFQVLGLEKGWGDTASRVSENI 250
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLD+L+APDPSTLEKFLG +PMVFNVVILSPHGYF QANVLG PDTGGQVVYILDQVR
Sbjct: 251 HLLLDLLEAPDPSTLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPDTGGQVVYILDQVR 310
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE EMLL+IK+QGLDI+P+ILIVTRL+PDA GTTC QRLERV GTEHTHILRVPFR++K
Sbjct: 311 ALETEMLLKIKQQGLDITPRILIVTRLLPDAVGTTCGQRLERVLGTEHTHILRVPFRTDK 370
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRF+VWPYLET+ EDV E+ E+Q PD IIGNYSDGNLVASLLA+++GITQ
Sbjct: 371 GILRKWISRFEVWPYLETYAEDVAHELAGEMQATPDLIIGNYSDGNLVASLLAHRLGITQ 430
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYP+SDIY KKFD++YHFSCQFTADLIAMN +DFIITST+QEIAG+K+TV
Sbjct: 431 CTIAHALEKTKYPNSDIYLKKFDDQYHFSCQFTADLIAMNQSDFIITSTFQEIAGSKDTV 490
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IY+PY E++KRLTALH IE+L
Sbjct: 491 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYYPYFEQEKRLTALHAEIEEL 550
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ +N+EH L DR+KPI+FSMARLD VKNMTGLVE YGKN +L+ELVNLVVVAG
Sbjct: 551 LYSSVENEEHKFVLKDRNKPIIFSMARLDRVKNMTGLVELYGKNDRLKELVNLVVVAG-- 608
Query: 499 DVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 557
D K SKD EE AE++KM++L++ YKL G RWI+AQ NR RNGELYRYIADTKGAFVQP
Sbjct: 609 DHGKESKDLEEQAELKKMYKLIEEYKLQGHIRWISAQMNRVRNGELYRYIADTKGAFVQP 668
Query: 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 617
AFYEAFGLTVVE+MTCGLPTFATCHGGPAEII HG SGFHIDPYH D+A+E + FF KC
Sbjct: 669 AFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGDKASEQLVSFFEKC 728
Query: 618 KENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 677
KE+P+HW+KIS GGL+RIYE+YTWK+YSERLMTLAGVYGFWKYVS L+RRETRRYLEMFY
Sbjct: 729 KEDPAHWEKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFY 788
Query: 678 ILKFRDLVKSVPLASEN 694
LK+R+L KSVPLA +N
Sbjct: 789 ALKYRNLAKSVPLAIDN 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Tulipa gesneriana (taxid: 13306) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function description |
|---|
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/619 (74%), Positives = 539/619 (87%), Gaps = 3/619 (0%)
Query: 76 AQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 135
+ LMLNDRIQ+ LQ L KAE++L +PP+TP+S+FE+ Q +G E+GWGD AE VL
Sbjct: 189 GKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDNAERVL 248
Query: 136 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 195
E + LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQVVYILD
Sbjct: 249 ESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILD 308
Query: 196 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 255
QVRALENEML RIK+QGLDI P+ILI+TRL+PDA GTTC QRLE+V GTEH+HILRVPFR
Sbjct: 309 QVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFR 368
Query: 256 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 315
+EKGI+R+WISRF+VWPYLET+TEDV E+ ELQG PD I+GNYSDGN+VASLLA+K+G
Sbjct: 369 TEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLG 428
Query: 316 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375
+TQCTIAHALEKTKYP+SDIYWKK +E+YHFSCQFTADL AMN+ DFIITST+QEIAG+K
Sbjct: 429 VTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSK 488
Query: 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435
+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD IYFP++E +RLT+ H I
Sbjct: 489 DTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHPEI 548
Query: 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495
E+LL+ +N+EH+ L DRSKPI+F+MARLD VKN+TGLVE YGKN++LRELVNLVVVA
Sbjct: 549 EELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVA 608
Query: 496 GYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF 554
G D K SKD EE AE++KM+ L++TYKL+GQFRWI++Q NR RNGELYR I DT+GAF
Sbjct: 609 G--DRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAF 666
Query: 555 VQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614
VQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+AA+L+ DFF
Sbjct: 667 VQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFF 726
Query: 615 GKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLE 674
KCK +P+HW KIS GL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+RRE+RRYLE
Sbjct: 727 EKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLE 786
Query: 675 MFYILKFRDLVKSVPLASE 693
MFY LK+R L +SVPLA+E
Sbjct: 787 MFYALKYRKLAESVPLAAE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1 | Back alignment and function description |
|---|
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/620 (74%), Positives = 536/620 (86%), Gaps = 3/620 (0%)
Query: 75 SAQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHV 134
+ + LMLN+R+Q+++ LQS L KA D+LS LP DTP+S+FE+ Q +GFE+GWGDTAE V
Sbjct: 190 NGKTLMLNNRVQNVNGLQSMLRKAGDYLSTLPSDTPYSEFEHKFQEIGFERGWGDTAERV 249
Query: 135 LEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYIL 194
EM H+LLD+L+APD STLE FLG++PMVFNVVILSPHGYF Q NVLG PDTGGQVVYIL
Sbjct: 250 TEMFHMLLDLLEAPDASTLETFLGKIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYIL 309
Query: 195 DQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPF 254
DQV ALE EM+ RIK QGLDI P+ILIVTRL+PDA GTTCNQRLE+V G EH HILRVPF
Sbjct: 310 DQVPALEREMIKRIKEQGLDIKPRILIVTRLLPDAVGTTCNQRLEKVFGAEHAHILRVPF 369
Query: 255 RSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM 314
R+EKGILR+WISRF+VWPY+ETFTEDV EI ELQ PD IIGNYS+GNLVASLLA+K+
Sbjct: 370 RTEKGILRKWISRFEVWPYIETFTEDVAKEIALELQAKPDLIIGNYSEGNLVASLLAHKL 429
Query: 315 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGT 374
G+TQCTIAHALEKTKYPDSDIYW+KFD+KYHFS QFTADLIAMN+ DFIITST+QEIAG+
Sbjct: 430 GVTQCTIAHALEKTKYPDSDIYWEKFDKKYHFSSQFTADLIAMNHTDFIITSTFQEIAGS 489
Query: 375 KNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 434
K+TVGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGAD +YF Y EK+KRLT LH
Sbjct: 490 KDTVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADTSVYFSYKEKEKRLTTLHPE 549
Query: 435 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 494
IE+LL+ +N+EH+ + D++KPI+F+MARLD+VKN+TG VE Y K+ +LRELVNLVVV
Sbjct: 550 IEELLYSSVENEEHLCIIKDKNKPILFTMARLDNVKNLTGFVEWYAKSPKLRELVNLVVV 609
Query: 495 AGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGA 553
G D K SKD EE A+++KM+EL+ TYKL+GQFRWI++Q NR RNGELYRYIADTKGA
Sbjct: 610 GG--DRRKESKDLEEQAQMKKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKGA 667
Query: 554 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 613
FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +Q AEL+ +F
Sbjct: 668 FVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNF 727
Query: 614 FGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYL 673
F KCK +PS W IS GGLKRI E+YTW+IYSERL+TLAGVYGFWK+VSKL+R E RRYL
Sbjct: 728 FEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYL 787
Query: 674 EMFYILKFRDLVKSVPLASE 693
EMFY LK+R L +SVPLA +
Sbjct: 788 EMFYALKYRKLAESVPLAKD 807
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P30298|SUS2_ORYSJ Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/617 (74%), Positives = 529/617 (85%), Gaps = 1/617 (0%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
+MLNDRIQS+ LQSSL KAE++L +P DTP+S+F + Q +G EKGWGD A+ VL+ +
Sbjct: 189 MMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGWGDCAKRVLDTI 248
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLD+L+APDP+ LEKFLG +PM+FNVVILSPHGYF Q+NVLG PDTGGQVVYILDQVR
Sbjct: 249 HLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTGGQVVYILDQVR 308
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIK+QGLDI+PKILIVTRL+PDA GTTC QR+E+V GTEHT ILRVPFRSE
Sbjct: 309 ALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHTDILRVPFRSEN 368
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWP+LET+TEDV +EI E+Q PD IIGNYSDGNLVA+LLA+K+G+TQ
Sbjct: 369 GILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLAHKLGVTQ 428
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYP+SDIY KFD +YHFSCQFTADLIAMN+ DFIITST+QEIAG+K+TV
Sbjct: 429 CTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 488
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM +YFPY+E KRLTA H IE+L
Sbjct: 489 GQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAFHPEIEEL 548
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ +NDEH L D++KPI+FSMARLD VKNMTGLVE YGKN+ LR+L NLV+V G
Sbjct: 549 LYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCG-D 607
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
N+SKDREE AE +KM+ L+ YKL G RWI+AQ NR RNGELYRYI DTKG FVQPA
Sbjct: 608 HGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPA 667
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTV+EAMTCGLPT ATCHGGPAEII G SG HIDPYH D+AA+++ +FF KCK
Sbjct: 668 FYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCK 727
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
++ ++W IS GGL+RIYE+YTWK+YSERLMTL GVYGFWKYVS LERRETRRY+EMFY
Sbjct: 728 QDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYA 787
Query: 679 LKFRDLVKSVPLASENQ 695
LK+R L +VPLA + +
Sbjct: 788 LKYRSLASAVPLAVDGE 804
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P31924|SUS1_ORYSJ Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/617 (74%), Positives = 530/617 (85%), Gaps = 1/617 (0%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
+MLNDRI+S+S LQ +L KAE+HLS L DTP+S+F + Q +G EKGWGD A+ E +
Sbjct: 197 MMLNDRIRSLSALQGALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETI 256
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLD+L+APDPSTLEKFLG +PMVFNVVI+SPHGYF QANVLG PDTGGQVVYILDQVR
Sbjct: 257 HLLLDLLEAPDPSTLEKFLGTIPMVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVR 316
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
A+ENEMLLRIK+QGL+I+P+ILIVTRL+PDA GTTC QRLE+V GTEHTHILRVPFR+E
Sbjct: 317 AMENEMLLRIKQQGLNITPRILIVTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTEN 376
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GI+R+WISRF+VWPYLETFT+DV EI ELQ PD IIGNYSDGNLVA LLA+KMG+T
Sbjct: 377 GIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 436
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYP+SD+YWKKF++ YHFSCQFT DLIAMN+ADFIITST+QEIAG K+TV
Sbjct: 437 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 496
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE +KRLT+LH IE+L
Sbjct: 497 GQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEEL 556
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ N+EH L DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVNLVVV G
Sbjct: 557 LYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCG-D 615
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
N SKD+EE AE +KM +L++ Y L+G RWI+AQ NR RNGELYRYI DTKGAFVQPA
Sbjct: 616 HGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPA 675
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVE+MTCGLPTFAT +GGPAEII +G SGFHIDPY D+A+ L+ +FF KC+
Sbjct: 676 FYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQ 735
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KIS GGL+RI E+YTWK+YSERLMTL GVYGFWKYVS LERRETRRYLEM Y
Sbjct: 736 EDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYA 795
Query: 679 LKFRDLVKSVPLASENQ 695
LK+R + +VPLA E +
Sbjct: 796 LKYRTMASTVPLAVEGE 812
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 696 | ||||||
| 6682841 | 811 | sucrose synthase [Citrus unshiu] | 0.892 | 0.765 | 0.995 | 0.0 | |
| 6682995 | 811 | sucrose synthase [Citrus unshiu] | 0.892 | 0.765 | 0.988 | 0.0 | |
| 399138446 | 819 | sucrose synthase [Litchi chinensis] | 0.880 | 0.748 | 0.926 | 0.0 | |
| 345104535 | 809 | sucrose synthase SusA1 [Gossypium darwin | 0.885 | 0.761 | 0.905 | 0.0 | |
| 345104539 | 809 | sucrose synthase SusA1 [Gossypium toment | 0.885 | 0.761 | 0.905 | 0.0 | |
| 359359016 | 809 | sucrose synthase [Gossypium herbaceum] | 0.885 | 0.761 | 0.905 | 0.0 | |
| 345104531 | 809 | sucrose synthase SusA1 [Gossypium mustel | 0.885 | 0.761 | 0.904 | 0.0 | |
| 345104543 | 809 | sucrose synthase SusA1 [Gossypium barbad | 0.885 | 0.761 | 0.904 | 0.0 | |
| 374252536 | 809 | SusA1 [Gossypium hirsutum] | 0.885 | 0.761 | 0.904 | 0.0 | |
| 345104559 | 809 | sucrose synthase SusA1 [Gossypium davids | 0.885 | 0.761 | 0.904 | 0.0 |
| >gi|6682841|dbj|BAA88904.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/621 (99%), Positives = 619/621 (99%)
Query: 76 AQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 135
LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL
Sbjct: 191 GHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 250
Query: 136 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 195
EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD
Sbjct: 251 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 310
Query: 196 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 255
QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR
Sbjct: 311 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 370
Query: 256 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 315
SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG
Sbjct: 371 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 430
Query: 316 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375
ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK
Sbjct: 431 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490
Query: 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435
NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI
Sbjct: 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550
Query: 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495
EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS+LRELVNLVVVA
Sbjct: 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVA 610
Query: 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 555
GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV
Sbjct: 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 670
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615
QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG
Sbjct: 671 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730
Query: 616 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 675
KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM
Sbjct: 731 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 790
Query: 676 FYILKFRDLVKSVPLASENQH 696
FYILKFRDLVKSVPLASENQH
Sbjct: 791 FYILKFRDLVKSVPLASENQH 811
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6682995|dbj|BAA88981.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/621 (98%), Positives = 617/621 (99%)
Query: 76 AQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 135
LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL
Sbjct: 191 GHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 250
Query: 136 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 195
EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD
Sbjct: 251 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 310
Query: 196 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 255
QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR
Sbjct: 311 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 370
Query: 256 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 315
SEKGILRQWIS+FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG
Sbjct: 371 SEKGILRQWISKFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 430
Query: 316 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375
ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK
Sbjct: 431 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490
Query: 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435
NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI SPGADMDIYFPYSEKQKRLTALHGSI
Sbjct: 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIASPGADMDIYFPYSEKQKRLTALHGSI 550
Query: 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495
EQLLFDPEQNDEHVGTLSD+SKPIVFSMARLDHVKNMTGLVECYGKNS+LRELVNLVVVA
Sbjct: 551 EQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVA 610
Query: 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 555
GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV
Sbjct: 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 670
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615
QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG
Sbjct: 671 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730
Query: 616 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 675
KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM
Sbjct: 731 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 790
Query: 676 FYILKFRDLVKSVPLASENQH 696
FYI KFRDLVKSVPLASENQH
Sbjct: 791 FYIPKFRDLVKSVPLASENQH 811
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138446|gb|AFP23359.1| sucrose synthase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/613 (92%), Positives = 590/613 (96%)
Query: 76 AQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVL 135
Q LMLNDRIQSISRLQS L+KAEDHLSKLPPDTP+ +FEYVLQGMGFEKGWGDTAEHVL
Sbjct: 191 GQALMLNDRIQSISRLQSVLAKAEDHLSKLPPDTPYPEFEYVLQGMGFEKGWGDTAEHVL 250
Query: 136 EMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILD 195
EM+HLL DILQAPDPSTLE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQ+VYILD
Sbjct: 251 EMIHLLSDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQIVYILD 310
Query: 196 QVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFR 255
QVRALENEML RIK+QGLDI+PKILIVTRLIPDAKGTTCNQRLERV GTEHTHILRVPFR
Sbjct: 311 QVRALENEMLFRIKKQGLDIAPKILIVTRLIPDAKGTTCNQRLERVGGTEHTHILRVPFR 370
Query: 256 SEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG 315
S+KGILR+WISRFDVWPYLETF EDV SEITAELQ FPDFIIGNYSDGNLVASLLAYKMG
Sbjct: 371 SDKGILRKWISRFDVWPYLETFAEDVASEITAELQAFPDFIIGNYSDGNLVASLLAYKMG 430
Query: 316 ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375
+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK
Sbjct: 431 VTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490
Query: 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435
NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI
Sbjct: 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550
Query: 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495
E LLFDPEQ DEHVGTL DRSKPI+FSMARLDHVKNMTGLVECYGKN++LRELVNLVVVA
Sbjct: 551 EALLFDPEQTDEHVGTLKDRSKPIIFSMARLDHVKNMTGLVECYGKNARLRELVNLVVVA 610
Query: 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 555
GYIDV+KSKDREEIAEIEKMH+LMKTY LDGQFRWI+AQTNRARNGELYRYIADTKGAFV
Sbjct: 611 GYIDVSKSKDREEIAEIEKMHDLMKTYNLDGQFRWISAQTNRARNGELYRYIADTKGAFV 670
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615
QPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AELMADFF
Sbjct: 671 QPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELMADFFQ 730
Query: 616 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEM 675
KCKE+PSHW KISD GL+RIYERYTWKIYSERL+TLAGVYGFWKYVSKLERRETRRYLEM
Sbjct: 731 KCKEDPSHWHKISDAGLRRIYERYTWKIYSERLLTLAGVYGFWKYVSKLERRETRRYLEM 790
Query: 676 FYILKFRDLVKSV 688
FYILKFR LV ++
Sbjct: 791 FYILKFRGLVSTL 803
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104535|gb|AEN71089.1| sucrose synthase SusA1 [Gossypium darwinii] gi|345104547|gb|AEN71095.1| sucrose synthase SusA1 [Gossypium barbadense var. peruvianum] gi|374252532|gb|AEZ00743.1| SusA1 [Gossypium barbadense] | Back alignment and taxonomy information |
|---|
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/616 (90%), Positives = 589/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium darwinii Species: Gossypium darwinii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104539|gb|AEN71091.1| sucrose synthase SusA1 [Gossypium tomentosum] gi|345104551|gb|AEN71097.1| sucrose synthase SusA1 [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
|---|
Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/616 (90%), Positives = 589/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium tomentosum Species: Gossypium tomentosum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359359016|gb|AEV40896.1| sucrose synthase [Gossypium herbaceum] | Back alignment and taxonomy information |
|---|
Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/616 (90%), Positives = 589/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium herbaceum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104531|gb|AEN71087.1| sucrose synthase SusA1 [Gossypium mustelinum] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/616 (90%), Positives = 588/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVP AS++
Sbjct: 794 LKFRELVKSVPFASDD 809
|
Source: Gossypium mustelinum Species: Gossypium mustelinum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104543|gb|AEN71093.1| sucrose synthase SusA1 [Gossypium barbadense var. brasiliense] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/616 (90%), Positives = 589/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDG+FRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGEFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium barbadense var. brasiliense Species: Gossypium barbadense Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|374252536|gb|AEZ00745.1| SusA1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/616 (90%), Positives = 589/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIV+RLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVSRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104559|gb|AEN71101.1| sucrose synthase SusA1 [Gossypium davidsonii] gi|345104561|gb|AEN71102.1| sucrose synthase SusA1 [Gossypium klotzschianum] | Back alignment and taxonomy information |
|---|
Score = 1186 bits (3068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/616 (90%), Positives = 588/616 (95%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQSI RLQ++L+KAEDHL+KL D P+S+FEY LQGMGFE+GWGDTA HVLE M
Sbjct: 194 LMLNDRIQSIPRLQAALAKAEDHLAKLSSDAPYSEFEYELQGMGFERGWGDTAAHVLETM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTEHTHILRVPFRSE
Sbjct: 314 ALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTEHTHILRVPFRSEH 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNLVASLLAYKMG+TQ
Sbjct: 374 GVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+KRLTALHGSIE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKEKRLTALHGSIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++LREL NLVVVAGYI
Sbjct: 554 LFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKLRELANLVVVAGYI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYRYIAD+KG FVQPA
Sbjct: 614 DVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYRYIADSKGIFVQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ AEL+A FF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQTAELLATFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PSHW KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPSHWTKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFR+LVKSVPLAS++
Sbjct: 794 LKFRELVKSVPLASDD 809
|
Source: Gossypium davidsonii Species: Gossypium davidsonii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 696 | ||||||
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.885 | 0.761 | 0.857 | 0.0 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.883 | 0.762 | 0.798 | 2.9e-291 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.946 | 0.807 | 0.694 | 4.9e-269 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.941 | 0.810 | 0.694 | 5.9e-264 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.942 | 0.811 | 0.675 | 8.9e-259 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.883 | 0.735 | 0.608 | 3.8e-216 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.883 | 0.652 | 0.634 | 2.2e-215 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.669 | 0.443 | 0.276 | 2.3e-34 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.685 | 0.455 | 0.265 | 1.4e-30 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.686 | 0.458 | 0.254 | 1.3e-28 |
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2835 (1003.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 528/616 (85%), Positives = 564/616 (91%)
Query: 79 LMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLND KAEDH+SKL +TPFS+FEY LQGMGFEKGWGDTA VLEMM
Sbjct: 194 LMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEKGWGDTAGRVLEMM 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLL DILQAPDPS+LEKFLG +PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 254 HLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE EMLLRIKRQGLDISP ILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK
Sbjct: 314 ALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWPYLE + +D SEI ELQG PDFIIGNYSDGNLVASL+A++MG+TQ
Sbjct: 374 GILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNLVASLMAHRMGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWK FD KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE+ +RLTALHGSIE++
Sbjct: 494 GQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEETRRLTALHGSIEEM 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ P+Q DEHVGTLSDRSKPI+FSMARLD VKN++GLVE Y KN++LRELVNLVV+AG I
Sbjct: 554 LYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAGNI 613
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
DVNKSKDREEI EIEKMH LMK YKLDGQFRWI AQTNRARNGELYRYIADT+GAF QPA
Sbjct: 614 DVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPA 673
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG SGFHIDPYHP+QA +MADFF +CK
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCK 733
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+P+HWKK+SD GL+RIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI
Sbjct: 734 EDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 793
Query: 679 LKFRDLVKSVPLASEN 694
LKFRDLVK+VP +++
Sbjct: 794 LKFRDLVKTVPSTADD 809
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2657 (940.4 bits), Expect = 2.9e-291, Sum P(2) = 2.9e-291
Identities = 491/615 (79%), Positives = 547/615 (88%)
Query: 79 LMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
+MLND +AE+ LSKLP TP+S+FE+ LQGMGFE+GWGDTA+ V EM+
Sbjct: 191 MMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQKVSEMV 250
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 251 HLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 310
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRI++QGL++ PKILIVTRL+P+AKGTTCNQRLERVSGTEH HILR+PFR+EK
Sbjct: 311 ALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRTEK 370
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWPYLETF ED +EI+AELQG P+ IIGNYSDGNLVASLLA K+G+ Q
Sbjct: 371 GILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQ 430
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
C IAHALEKTKYP+SDIYW+ ++KYHFS QFTADLIAMNNADFIITSTYQEIAG+KN V
Sbjct: 431 CNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNV 490
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K++RLTALH SIE+L
Sbjct: 491 GQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEEL 550
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
LF EQNDEHVG LSD+SKPI+FSMARLD VKN+TGLVECY KNS+LREL NLV+V GYI
Sbjct: 551 LFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYI 610
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
D N+S+DREE+AEI+KMH L++ Y L G+FRWIAAQ NRARNGELYRYIADTKG FVQPA
Sbjct: 611 DENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPA 670
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
FYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+G SGFHIDPYHPDQ A + FF C
Sbjct: 671 FYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCN 730
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
NP+HW KIS+GGLKRIYERYTWK YSERL+TLAGVY FWK+VSKLERRETRRYLEMFY
Sbjct: 731 TNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYS 790
Query: 679 LKFRDLVKSVPLASE 693
LKFRDL S+PLA++
Sbjct: 791 LKFRDLANSIPLATD 805
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2436 (862.6 bits), Expect = 4.9e-269, Sum P(2) = 4.9e-269
Identities = 462/665 (69%), Positives = 536/665 (80%)
Query: 31 LSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQLLMLNDXXXXXXX 90
LS+ + G L H+ +F D E L + + K +MLND
Sbjct: 154 LSKSIGNGVQFLNRHLS----SKLFHDKESMYPLLNFLRAHNYKG-MTMMLNDRIRSLSA 208
Query: 91 XXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDP 150
KAE+HLS L DTP+S+F + Q +G EKGWGD A+ E +HLLLD+L+APDP
Sbjct: 209 LQGALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDP 268
Query: 151 STLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKR 210
STLEKFLG +PMVFNVVI+SPHGYF QANVLG PDTGGQVVYILDQVRA+ENEMLLRIK+
Sbjct: 269 STLEKFLGTIPMVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQ 328
Query: 211 QGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDV 270
QGL+I+P+ILIVTRL+PDA GTTC QRLE+V GTEHTHILRVPFR+E GI+R+WISRF+V
Sbjct: 329 QGLNITPRILIVTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEV 388
Query: 271 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKY 330
WPYLETFT+DV EI ELQ PD IIGNYSDGNLVA LLA+KMG+T CTIAHALEKTKY
Sbjct: 389 WPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKY 448
Query: 331 PDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLP 390
P+SD+YWKKF++ YHFSCQFT DLIAMN+ADFIITST+QEIAG K+TVGQYESH AFT+P
Sbjct: 449 PNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMP 508
Query: 391 GLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450
GLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE +KRLT+LH IE+LL+ N+EH
Sbjct: 509 GLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKF 568
Query: 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIA 510
L DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVNLVVV G N SKD+EE A
Sbjct: 569 MLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHG-NPSKDKEEQA 627
Query: 511 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEA 570
E +KM +L++ Y L+G RWI+AQ NR RNGELYRYI DTKGAFVQPAFYEAFGLTVVE+
Sbjct: 628 EFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVES 687
Query: 571 MTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 630
MTCGLPTFAT +GGPAEII +G SGFHIDPY D+A+ L+ +FF KC+E+PSHW KIS G
Sbjct: 688 MTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQG 747
Query: 631 GLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPL 690
GL+RI E+YTWK+YSERLMTL GVYGFWKYVS LERRETRRYLEM Y LK+R + +VPL
Sbjct: 748 GLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPL 807
Query: 691 ASENQ 695
A E +
Sbjct: 808 AVEGE 812
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2429 (860.1 bits), Expect = 5.9e-264, Sum P(2) = 5.9e-264
Identities = 462/665 (69%), Positives = 548/665 (82%)
Query: 31 LSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIK-SAQLLMLNDXXXXXX 89
L++Y+ G L H+ +F D E L F + + LMLN+
Sbjct: 151 LNKYIGDGVEFLNRHLSA----KLFHDKESLHPLLK--FLRLHSHEGKTLMLNNRIQNLN 204
Query: 90 XXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPD 149
KAE++L +L P+T +S+FE+ Q +G E+GWGDTAE VL M+ LLLD+L+APD
Sbjct: 205 TLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWGDTAERVLNMIRLLLDLLEAPD 264
Query: 150 PSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIK 209
P TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVRALE EML RIK
Sbjct: 265 PCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALETEMLQRIK 324
Query: 210 RQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFD 269
+QGL+I+P+ILI+TRL+PDA GTTC QRLE+V G+++ ILRVPFR+EKGI+R+WISRF+
Sbjct: 325 QQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCDILRVPFRTEKGIVRKWISRFE 384
Query: 270 VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTK 329
VWPYLETFTEDV +EI+ ELQG PD IIGNYSDGNLVASLLA+K+G+TQCTIAHALEKTK
Sbjct: 385 VWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK 444
Query: 330 YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTL 389
YPDSDIYWKK DEKYHFSCQFTADLIAMN+ DFIITST+QEIAG+K+TVGQYESH +FTL
Sbjct: 445 YPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHRSFTL 504
Query: 390 PGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449
PGLYRVVHGIDVFDPKFNIVSPGADM IYF Y+E+++RLTA H IE+LL+ +N+EH+
Sbjct: 505 PGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRLTAFHLEIEELLYSDVENEEHL 564
Query: 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNK-SKDREE 508
L D+ KPI+F+MARLD VKN++GLVE YGKN++LRELVNLVVV G D K S+D EE
Sbjct: 565 CVLKDKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGG--DRRKESQDNEE 622
Query: 509 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV 568
AE++KM+EL++ YKL+GQFRWI++Q NR RNGELYRYI DTKGAFVQPA YEAFGLTVV
Sbjct: 623 KAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV 682
Query: 569 EAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKIS 628
EAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+AAE +ADFF KCK +PSHW +IS
Sbjct: 683 EAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCKHDPSHWDQIS 742
Query: 629 DGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSV 688
GGL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+R E+RRYLEMFY LK+R L ++V
Sbjct: 743 LGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRPLAQAV 802
Query: 689 PLASE 693
PLA E
Sbjct: 803 PLAHE 807
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2369 (839.0 bits), Expect = 8.9e-259, Sum P(2) = 8.9e-259
Identities = 450/666 (67%), Positives = 537/666 (80%)
Query: 31 LSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIK-SAQLLMLNDXXXXXX 89
L +Y+ G L H+ +F D E L F + + LML++
Sbjct: 151 LHKYIGNGVDFLNRHLSA----KLFHDKESLLPLLK--FLRLHSHQGKNLMLSEKIQNLN 204
Query: 90 XXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPD 149
KAE++L++L +T + +FE + +G E+GWGD AE VL+M+ LLLD+L+APD
Sbjct: 205 TLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPD 264
Query: 150 PSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIK 209
P TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVRALE EML RIK
Sbjct: 265 PCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIK 324
Query: 210 RQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFD 269
+QGL+I P+ILI+TRL+PDA GTTC +RLERV +E+ ILRVPFR+EKGI+R+WISRF+
Sbjct: 325 QQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFE 384
Query: 270 VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTK 329
VWPYLET+TED E++ EL G PD IIGNYSDGNLVASLLA+K+G+TQCTIAHALEKTK
Sbjct: 385 VWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK 444
Query: 330 YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTL 389
YPDSDIYWKK D+KYHFSCQFTAD+ AMN+ DFIITST+QEIAG+K TVGQYESHTAFTL
Sbjct: 445 YPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTL 504
Query: 390 PGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449
PGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+E+++RLT H IE+LL+ +N EH+
Sbjct: 505 PGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHL 564
Query: 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNK-SKDREE 508
L D+ KPI+F+MARLD VKN++GLVE YGKN++LREL NLVVV G D K SKD EE
Sbjct: 565 CVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGG--DRRKESKDNEE 622
Query: 509 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV 568
AE++KM++L++ YKL+GQFRWI++Q +R RNGELYRYI DTKGAFVQPA YEAFGLTVV
Sbjct: 623 KAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVV 682
Query: 569 EAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKIS 628
EAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQAA+ +ADFF KCKE+PSHW +IS
Sbjct: 683 EAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEIS 742
Query: 629 DGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSV 688
GGL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+R E RRYLEMFY LK+R L ++V
Sbjct: 743 KGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAV 802
Query: 689 PLASEN 694
PLA ++
Sbjct: 803 PLAQDD 808
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2034 (721.1 bits), Expect = 3.8e-216, Sum P(2) = 3.8e-216
Identities = 374/615 (60%), Positives = 481/615 (78%)
Query: 79 LMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LM+N+ A+ LS+LP DTPF FE + GFEKGWG++A V E M
Sbjct: 187 LMMNETLNTARKLEMSLILADVFLSELPKDTPFQAFELRFKECGFEKGWGESAGRVKETM 246
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
+L +ILQAPDP +++F R+P +FNVVI S HGYFGQ +VLGLPDTGGQVVYILDQV+
Sbjct: 247 RILSEILQAPDPQNIDRFFARVPRIFNVVIFSVHGYFGQTDVLGLPDTGGQVVYILDQVK 306
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE+E+L RI QGL+ P+IL+VTRLIPDAK T CNQ LE + GT++++ILR+PF +E
Sbjct: 307 ALEDELLQRINSQGLNFKPQILVVTRLIPDAKKTKCNQELEPIFGTKYSNILRIPFVTEN 366
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+W+SRFD++PYLE FT+D ++I L+G PD IIGNY+DGNLVASL+A K+GITQ
Sbjct: 367 GILRRWVSRFDIYPYLERFTKDATTKILDILEGKPDLIIGNYTDGNLVASLMANKLGITQ 426
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
TIAHALEKTKY DSDI WK+FD KYHFS QFTADLI+MN+ADFII STYQEIAG+K
Sbjct: 427 ATIAHALEKTKYEDSDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERA 486
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESH +FT+PGLYRVV GI+VFDP+FNI +PGAD IYFP++ + +R T + SI++L
Sbjct: 487 GQYESHMSFTVPGLYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDEL 546
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ +NDEH+G L D+ KPI+FSMARLD VKN+TGL E Y KN +LR+LVNLV+V G+
Sbjct: 547 LYSQSENDEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFF 606
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
D +KSKDREEI+EI+KMH L++ Y+L GQFRWI AQT+R RNGELYR IADT+GAFVQPA
Sbjct: 607 DASKSKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAFVQPA 666
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
YEAFGLTV+EAM+CGL TFAT GGPAEII G SGFHIDP + +++++ +ADFF K
Sbjct: 667 HYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIADFFEKSG 726
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
+P +W S+ GL+RI E YTWKIY+ +++ + Y +W++++K ++ +RY+ FY
Sbjct: 727 MDPDYWNMFSNEGLQRINECYTWKIYANKVINMGSTYSYWRHLNKDQKLAKQRYIHSFYN 786
Query: 679 LKFRDLVKSVPLASE 693
L++R+LVK++P+ S+
Sbjct: 787 LQYRNLVKTIPILSD 801
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2081 (737.6 bits), Expect = 2.2e-215, P = 2.2e-215
Identities = 390/615 (63%), Positives = 475/615 (77%)
Query: 79 LMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LM+ND A +S TP+ F L+ MGFEKGWGDTAE V E M
Sbjct: 198 LMINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEKGWGDTAERVKETM 257
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
+L ++L+APD L+ RLP VFNVVI S HGYFGQ +VLGLPDTGGQVVYILDQVR
Sbjct: 258 IILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPDTGGQVVYILDQVR 317
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE E+L+RI +QGL P+IL+VTRLIP+A+GT C+Q LE + GT+H+HILRVPF + K
Sbjct: 318 ALEEELLIRINQQGLGFKPQILVVTRLIPEARGTKCDQELEAIEGTKHSHILRVPFVTNK 377
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
G+LRQW+SRFD++PYLE FT+D S+I L PD IIGNY+DGNLVASL+A K+G+TQ
Sbjct: 378 GVLRQWVSRFDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQ 437
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
TIAHALEKTKY DSD WK+ D KYHFSCQFTADLIAMN DFIITSTYQEIAG+K+
Sbjct: 438 GTIAHALEKTKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRP 497
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFT+PGL RVV GIDVFDPKFNI +PGAD +YFPY+EK KR T H SI++L
Sbjct: 498 GQYESHTAFTMPGLCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKDKRFTKFHPSIQEL 557
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L++ + N EH+G L+DR KPI+FSMARLD VKN+TGLVE YGK+ +LRE+ NLVVVAG+
Sbjct: 558 LYNEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVAGFF 617
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
D++KS DREE AEI+KMH+L++ YKL G+FRWIAAQT+R RN ELYR IADTKG FVQPA
Sbjct: 618 DMSKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNSELYRCIADTKGVFVQPA 677
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
YEAFGLTV+EAM CGLPTFAT GGPAEII G SGFHIDP + D++ + DFF KC+
Sbjct: 678 LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTKIGDFFSKCR 737
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
+ +W IS GGLKRIYE YTWKIY+E+L+ + +YGFW+ V++ +++ +RY+EM Y
Sbjct: 738 SDGLYWDNISKGGLKRIYECYTWKIYAEKLLKMGSLYGFWRQVNEDQKKAKKRYIEMLYN 797
Query: 679 LKFRDLVKSVPLASE 693
L+F+ L K V + +
Sbjct: 798 LQFKQLTKKVTIPED 812
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 137/495 (27%), Positives = 230/495 (46%)
Query: 166 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALEN-EMLLRIKRQGLDISPKILIV 222
+V++S HG N+ LG DTGGQV Y+++ RAL N E + R+ IS +
Sbjct: 197 IVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVHRVDLLTRQISSPEVDY 256
Query: 223 TRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRS-EKGILRQ--W--ISRF--DVWPYLE 275
+ P + +C G+ +I+R+P S +K I ++ W I F ++
Sbjct: 257 SYGEP-VEMLSCPPEGSDSCGS---YIIRIPCGSRDKYIPKESLWPHIPEFVDGALNHIV 312
Query: 276 TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPD--- 332
+ +G ++ +P I G+Y+D VA+ LA + + H+L + K+
Sbjct: 313 SIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGHSLGRNKFEQLLQ 372
Query: 333 -SDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLP- 390
I + D Y + A+ +++ A+ ++TST QEI ++ L
Sbjct: 373 QGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYDGFDIKLERKLRV 432
Query: 391 GLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR--LTALHGSIEQLLFDPEQN--D 446
R V + + P+ ++ PG D ++ L +L G + P
Sbjct: 433 RRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDRNQIKKPVPPIWS 492
Query: 447 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDR 506
E + S+ KP + +++R DH KN+T LV+ +G+ LREL NLV++ G D +
Sbjct: 493 EIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLILGNRDDIEEMPN 552
Query: 507 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLT 566
+ + +L+ Y L GQ + ++ ++YR A TKG F+ PA E FGLT
Sbjct: 553 SSSVVLMNVLKLIDQYDLYGQVAY-PKHHKQSEVPDIYRLAAKTKGVFINPALVEPFGLT 611
Query: 567 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 626
++EA GLP AT +GGP +I++ +G +DP+ DQ A ++D K N W +
Sbjct: 612 LIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPH--DQQA--ISDALLKLVANKHLWAE 667
Query: 627 ISDGGLKRIYERYTW 641
GLK I+ R++W
Sbjct: 668 CRKNGLKNIH-RFSW 681
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 139/523 (26%), Positives = 237/523 (45%)
Query: 166 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIKRQGLDISPKILIV 222
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ ++ +
Sbjct: 177 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDS 236
Query: 223 TRLIPDAKGTTCNQRLERVSG-TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED- 280
+ P + +E+ +G + +I+R+PF G +++ + +WP++ F +
Sbjct: 237 SYSEPSEMLNPIDTDIEQENGESSGAYIIRIPF----GPKDKYVPKELLWPHIPEFVDRA 292
Query: 281 ----------VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKY 330
+G +I Q +P I G+Y+D +LL+ + + H+L + K
Sbjct: 293 LSHIMQISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKL 352
Query: 331 PDSDIYWKKFDE---KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 387
+ +E Y + A+ + ++ ++ +ITST QE+ ++
Sbjct: 353 EQLLKQGRPKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLER 412
Query: 388 TLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ-LLFDPEQN 445
L + R V + F P+ ++ PG + P+ G E DP
Sbjct: 413 KLRARMKRGVSCLGRFMPRMVVIPPGMEFHHIVPHD------VDADGDDENPQTADPPIW 466
Query: 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY---IDVNK 502
E + S+ KP++ ++AR D KN+ LV+ +G+ LREL NL ++ G ID
Sbjct: 467 SEIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELS 526
Query: 503 SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562
S + + I K L+ Y L GQ + ++ E+YR A TKG F+ PAF E
Sbjct: 527 STNSSVLLSILK---LIDKYDLYGQVA-MPKHHQQSDVPEIYRLAAKTKGVFINPAFIEP 582
Query: 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 622
FGLT++EA GLPT AT +GGP +I +G +DP+ DQ A +AD K +
Sbjct: 583 FGLTLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPH--DQQA--IADALLKLVSDRQ 638
Query: 623 HWKKISDGGLKRIYERYTW----KIYSERLMTLAGVYGFWKYV 661
W + GL I+ ++W K Y R+ + + W+ V
Sbjct: 639 LWGRCRQNGLNNIH-LFSWPEHCKTYLARIASCKQRHPKWQRV 680
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 352 (129.0 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 133/523 (25%), Positives = 232/523 (44%)
Query: 166 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIK---RQ--GLDISP 217
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ RQ D+
Sbjct: 170 LVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDY 229
Query: 218 KILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETF 277
T ++ + + SG +I+R+PF G ++I + +WP++ F
Sbjct: 230 SYGEPTEMLTPRDSEDFSDEMGESSGA---YIVRIPF----GPKDKYIPKELLWPHIPEF 282
Query: 278 TEDVGSEIT------AELQG-----FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALE 326
+ S I E G +P I G+Y+D +LL+ + + H+L
Sbjct: 283 VDGAMSHIMQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLG 342
Query: 327 KTKYPD----SDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 382
+ K + ++ + Y + + ++++ ++ +ITST QEI ++
Sbjct: 343 RDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFD 402
Query: 383 SHTAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF- 440
L + R V F P+ + PG + + P+ + G+ E
Sbjct: 403 PILERKLRARIKRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDMEDTD---GNEEHPTSP 459
Query: 441 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDV 500
DP E + S+ KP++ ++AR D KN+T LV+ +G+ LREL NL ++ G D
Sbjct: 460 DPPIWAEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDG 519
Query: 501 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560
+ + + +L+ Y L GQ + ++ ++YR A +KG F+ PA
Sbjct: 520 IDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKSKGVFINPAII 578
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 620
E FGLT++EA GLP AT +GGP +I +G +DP+ +E + K +
Sbjct: 579 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALL----KLVAD 634
Query: 621 PSHWKKISDGGLKRIYERYTW----KIYSERLMTLAGVYGFWK 659
W K GLK I++ ++W K Y R+ + + W+
Sbjct: 635 KHLWAKCRQNGLKNIHQ-FSWPEHCKTYLSRITSFKPRHPQWQ 676
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.8190 | 0.8864 | 0.8054 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7394 | 0.8836 | 0.7677 | N/A | no |
| Q9M111 | SUS3_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.875 | 0.8850 | 0.7614 | yes | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.7431 | 0.8850 | 0.7652 | N/A | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7491 | 0.8778 | 0.7618 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7035 | 0.9367 | 0.8099 | N/A | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.7366 | 0.8850 | 0.7642 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7346 | 0.8836 | 0.7536 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7394 | 0.8821 | 0.7608 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.7350 | 0.8850 | 0.7652 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7455 | 0.8850 | 0.7512 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7714 | 0.8821 | 0.7627 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7495 | 0.8850 | 0.7652 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.6912 | 0.9396 | 0.8144 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7467 | 0.8864 | 0.7636 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7423 | 0.8850 | 0.7549 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.7080 | 0.9367 | 0.8099 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.8743 | 0.8807 | 0.7577 | N/A | no |
| Q10LP5 | SUS4_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.8357 | 0.8893 | 0.7651 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pm.C_LG_II0867 | sucrose synthase (EC-2.4.1.13) (812 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| fgenesh4_pg.C_LG_XVIII000433 | hypothetical protein (1054 aa) | • | • | • | 0.915 | ||||||
| fgenesh4_pm.C_LG_I000988 | hypothetical protein (1069 aa) | • | • | • | 0.914 | ||||||
| estExt_Genewise1_v1.C_1520214 | hypothetical protein (1049 aa) | • | • | • | 0.914 | ||||||
| fgenesh4_pg.C_scaffold_88000008 | hypothetical protein (1069 aa) | • | • | • | 0.914 | ||||||
| gw1.XIII.3112.1 | hypothetical protein (1020 aa) | • | • | • | 0.914 | ||||||
| gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | ||||||||
| gw1.IV.2527.1 | trehalose-6-phosphate synthase (769 aa) | • | 0.899 | ||||||||
| gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_scaffold_9882000001 | annotation not avaliable (198 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_III000738 | hypothetical protein (861 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 696 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-134 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 5e-61 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 1e-32 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 1e-29 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 4e-23 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 1e-22 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-21 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-20 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 1e-16 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-16 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-15 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 1e-14 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 9e-13 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 6e-12 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 7e-12 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-11 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 5e-10 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 8e-10 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 2e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 3e-09 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 2e-08 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-08 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-08 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 3e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 4e-08 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 4e-08 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 1e-07 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 2e-07 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 3e-07 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-07 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 4e-07 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 7e-07 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 9e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 1e-06 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 4e-06 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 1e-05 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 1e-04 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 4e-04 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 6e-04 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 8e-04 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 9e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.003 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 0.004 | |
| PRK09922 | 359 | PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo | 0.004 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1425 bits (3692), Expect = 0.0
Identities = 518/618 (83%), Positives = 568/618 (91%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQ++S+LQS+L KAE++LSKLP DTP+S+FE+ Q +G EKGWGDTAE VLE +
Sbjct: 195 LMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVLETI 254
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLD+LQAPDPSTLEKFLGR+PMVFNVVI SPHGYFGQANVLGLPDTGGQVVYILDQVR
Sbjct: 255 HLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVR 314
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEMLLRIK+QGLDI P+ILIVTRLIPDAKGTTCNQRLE+VSGTEH+HILRVPFR+EK
Sbjct: 315 ALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEK 374
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRFDVWPYLETF ED SEI AELQG PD IIGNYSDGNLVASLLA+K+G+TQ
Sbjct: 375 GILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQ 434
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKFD+KYHFSCQFTADLIAMN+ADFIITSTYQEIAG+K+TV
Sbjct: 435 CTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTV 494
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+EKQKRLT+LH SIE+L
Sbjct: 495 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEEL 554
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ PEQNDEH+G L DR KPI+FSMARLD VKN+TGLVE YGKN +LRELVNLVVV G+I
Sbjct: 555 LYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFI 614
Query: 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558
D +KSKDREEIAEI+KMH L++ Y L GQFRWIAAQTNR RNGELYRYIADTKGAFVQPA
Sbjct: 615 DPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPA 674
Query: 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618
YEAFGLTVVEAMTCGLPTFATC GGPAEII G SGFHIDPYH D+AA +ADFF KCK
Sbjct: 675 LYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCK 734
Query: 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYI 678
E+PS+W KISD GL+RIYE YTWKIY+ERL+TL GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 735 EDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYN 794
Query: 679 LKFRDLVKSVPLASENQH 696
LKFR+L K+VPLA ++
Sbjct: 795 LKFRELAKTVPLAVDDPQ 812
|
Length = 815 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 1237 bits (3202), Expect = 0.0
Identities = 482/614 (78%), Positives = 539/614 (87%), Gaps = 1/614 (0%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LM+NDRIQS+S LQS L KAE+ LS LPPDTP+S+FE+ LQ +GFE GWGDTA+ VLE +
Sbjct: 171 LMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETL 230
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLL D+L+APDPS LE FLGR+PMVFNVVILSPHGYFGQ NVLGLPDTGGQVVYILDQVR
Sbjct: 231 HLLDDLLEAPDPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVR 290
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALENEML RIK QGL+I+PKILIVTRLIPDA+GTTCNQRLE+V GTEH ILRVPFR+E
Sbjct: 291 ALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTEN 350
Query: 259 GI-LRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT 317
GI LR WISRF++WPYLETF ED EI AELQG PD IIGNYSDGNLVASLLA K+G+T
Sbjct: 351 GIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVT 410
Query: 318 QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 377
QCTIAHALEKTKYPDSDIYW++F++KYHFSCQFTADLIAMN ADFIITSTYQEIAGTK++
Sbjct: 411 QCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDS 470
Query: 378 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ 437
VGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGAD IYFPYS+K+KRLT LH IE+
Sbjct: 471 VGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEE 530
Query: 438 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY 497
LLF E NDEH G L D +KPI+FSMARLD VKN+TGLVECYG++ +LRELVNLVVVAG
Sbjct: 531 LLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGK 590
Query: 498 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 557
+D +SKDREE AEIEKMH L+ Y+L GQ RWI AQ NR RNGELYRYIADTKG FVQP
Sbjct: 591 LDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQP 650
Query: 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 617
A YEAFGLTV+EAMTCGLPTFAT GGP EII+ G SGFHIDPYH ++AAE + DFF KC
Sbjct: 651 ALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKC 710
Query: 618 KENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 677
E+PS+W+KIS GGL+RIYE+YTWKIYSERL+TLAG+YGFWK+VSKLER ETRRYLEMFY
Sbjct: 711 DEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFY 770
Query: 678 ILKFRDLVKSVPLA 691
LK+R L ++VPLA
Sbjct: 771 HLKYRPLAEAVPLA 784
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 734 bits (1896), Expect = 0.0
Identities = 307/362 (84%), Positives = 341/362 (94%)
Query: 79 LMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LMLNDRIQ+IS LQS+L KAED+LS LPPDTP+S+FE+ Q +GFE+GWGDTAE VLEMM
Sbjct: 188 LMLNDRIQNISALQSALRKAEDYLSTLPPDTPYSEFEHKFQEIGFERGWGDTAERVLEMM 247
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
HLLLD+L+APDPSTLE FLGR+PMVFNVVILSPHGYF QANVLG PDTGGQVVYILDQVR
Sbjct: 248 HLLLDLLEAPDPSTLETFLGRIPMVFNVVILSPHGYFAQANVLGYPDTGGQVVYILDQVR 307
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE+EML+RIK+QGLDI+P+ILIVTRL+PDA GTTCNQRLE+V GTEHTHILRVPFR+EK
Sbjct: 308 ALESEMLVRIKQQGLDITPRILIVTRLLPDAVGTTCNQRLEKVFGTEHTHILRVPFRTEK 367
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GILR+WISRF+VWPYLETF EDV SEI AELQ PD IIGNYSDGNLVASLLA+K+G+TQ
Sbjct: 368 GILRKWISRFEVWPYLETFAEDVASEIAAELQAKPDLIIGNYSDGNLVASLLAHKLGVTQ 427
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKKF++KYHFSCQFTADLIAMN+ADFIITST+QEIAG+K+TV
Sbjct: 428 CTIAHALEKTKYPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEIAGSKDTV 487
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+EK+KRLTALH IE+L
Sbjct: 488 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYTEKEKRLTALHPEIEEL 547
Query: 439 LF 440
L+
Sbjct: 548 LY 549
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-134
Identities = 137/486 (28%), Positives = 203/486 (41%), Gaps = 88/486 (18%)
Query: 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTR 224
+ ++S HG G DTGGQ VY+L+ RAL R G ++ I TR
Sbjct: 1 RIALISLHGSPLAQP--GGADTGGQNVYVLELARAL--------ARLG----HEVDIFTR 46
Query: 225 LIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 284
I DA V ++RVP + + ++ ++WPYL+ F +D+
Sbjct: 47 RIDDALP-------PIVELAPGVRVVRVPAGPAEYLPKE-----ELWPYLDEFADDLLRF 94
Query: 285 ITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 344
+ E G PD I +Y D LVA LLA ++GI H+L K Y
Sbjct: 95 LRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADT-----Y 148
Query: 345 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404
+ + A+ + AD +I ST QE + G Y
Sbjct: 149 EPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRR-------------------- 188
Query: 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 464
+V PG D++ + PY + R L L D KP + ++
Sbjct: 189 -IRVVPPGVDLERFTPYGRAEARRARL--------------------LRDPDKPRILAVG 227
Query: 465 RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524
RLD K + L+ Y + +LRE NLV+V G D + D EE+ E+ + ++
Sbjct: 228 RLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDF 287
Query: 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 584
+ +R LYR FV PA YE FGLT +EAM CGLP AT GG
Sbjct: 288 -------PGRVSREDLPALYRA----ADVFVNPALYEPFGLTALEAMACGLPVVATAVGG 336
Query: 585 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644
P +I+ G +G +DP P+ A + +P+ +++S GL+R RYTW+
Sbjct: 337 PRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392
Query: 645 SERLMT 650
+ RL+
Sbjct: 393 AARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 5e-61
Identities = 136/495 (27%), Positives = 238/495 (48%), Gaps = 67/495 (13%)
Query: 166 VVILSPHGYFGQANVLGL---PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 222
+++LS HG + + L L DTGGQ Y+L+ RAL R ++ ++ +V
Sbjct: 3 LLLLSLHGLI-RGHDLELGRDADTGGQTKYVLELARALAR-------RSEVE---QVDLV 51
Query: 223 TRLIPDAK-GTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDV 281
TRLI DAK Q +ER++ I+R+PF R+++ + +WPYL+ +++
Sbjct: 52 TRLIKDAKVSPDYAQPIERIA--PGARIVRLPFGP-----RRYLRKELLWPYLDELADNL 104
Query: 282 GSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP---DSDIYWK 338
+ + PD I +Y+D V + L+ +G+ H+L + K + + +
Sbjct: 105 LQHLR-QQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQ 163
Query: 339 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 398
+ +++Y+ S + A+ + +A +ITST+QEI QY LY
Sbjct: 164 QIEKQYNISRRIEAEEETLAHASLVITSTHQEI------EEQY---------ALY----- 203
Query: 399 IDVFDP-KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSK 457
D + P + ++ PG D+ ++P ++ + + + L DPE K
Sbjct: 204 -DSYQPERMQVIPPGVDLSRFYPPQSSEE-TSEIDNLLAPFLKDPE-------------K 248
Query: 458 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE 517
P + +++R D KN+ LVE YG++ +L+E+ NLV+V G D + + ++ ++K+
Sbjct: 249 PPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLL 308
Query: 518 LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 577
L+ Y L G+ ELYR A ++G FV PA E FGLT++EA CGLP
Sbjct: 309 LIDRYDLYGKVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPI 367
Query: 578 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637
AT GGP +II + +G +D + A + D + S W+ S G++ +
Sbjct: 368 VATDDGGPRDIIANCRNGLLVDVLDLEAIASALED----ALSDSSQWQLWSRNGIEGVRR 423
Query: 638 RYTWKIYSERLMTLA 652
Y+W + E+ + +
Sbjct: 424 HYSWDAHVEKYLRIL 438
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-32
Identities = 141/546 (25%), Positives = 243/546 (44%), Gaps = 106/546 (19%)
Query: 166 VVILSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALEN-------EMLLR-IKRQGLDI 215
+V++S HG N+ LG DTGGQV Y+++ RAL + ++L R + +D
Sbjct: 172 IVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDW 231
Query: 216 S---PKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP 272
S P ++ R + + + + +I+R+PF G ++I + ++WP
Sbjct: 232 SYGEPTEMLTPRSSENDG--------DEMGESSGAYIIRIPF----GPRDKYIPKEELWP 279
Query: 273 YLETFTED-----------VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 321
Y+ F + +G +I + +P I G+Y+D A+LL+ + +
Sbjct: 280 YIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLT 339
Query: 322 AHALEKTK---------YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 372
H+L + K +I + Y + A+ ++++ ++ +ITST QEI
Sbjct: 340 GHSLGRDKLEQLLKQGRMSKEEI-----NSTYKIMRRIEAEELSLDASEIVITSTRQEIE 394
Query: 373 GTKNTVGQYESHTAFTLPGLYRVV----------HGIDVFDPKFNIVSPGADMDIYFPYS 422
Q+ + F L R + +G F P+ ++ PG + P+
Sbjct: 395 E------QWGLYDGFD-VILERKLRARARRGVSCYG--RFMPRMAVIPPGMEFSHIVPHD 445
Query: 423 EKQKRLTALHGSIEQLLFDPEQND-----EHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477
+ G E P + D E + ++ KP++ ++AR D KN+T LV+
Sbjct: 446 GD------MDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVK 499
Query: 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH--------ELMKTYKLDGQFR 529
+G+ LREL NL ++ G +R++I E+ +L+ Y L GQ
Sbjct: 500 AFGECRPLRELANLTLIMG--------NRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVA 551
Query: 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 589
+ ++ ++YR A TKG F+ PAF E FGLT++EA GLP AT +GGP +I
Sbjct: 552 Y-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH 610
Query: 590 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW----KIYS 645
+G +DP+ DQ A +AD K + W + GLK I+ ++W K Y
Sbjct: 611 RVLDNGLLVDPH--DQQA--IADALLKLVADKQLWAECRQNGLKNIH-LFSWPEHCKTYL 665
Query: 646 ERLMTL 651
R+ +
Sbjct: 666 SRIASC 671
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-29
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
AAP L+R SIRERV D LS HRNEL +LLSRYVAQGKGILQPH LIDEL+ + DDE
Sbjct: 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEE 61
Query: 61 RQNLRDGPFSEVIKSAQ 77
R+ L DGPF ++++S Q
Sbjct: 62 RKKLLDGPFGDILRSTQ 78
|
Length = 815 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-23
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRD 66
+R+ S+RER++DTLS HRNEL++LLSR VAQGKGILQPH LI E + I G+D + + ++
Sbjct: 1 TRVHSLRERLDDTLSAHRNELLALLSRIVAQGKGILQPHQLIAEYEAILGEDRAKLDDKN 60
Query: 67 GPFSEVIKSAQ 77
G F EVIKSAQ
Sbjct: 61 GAFGEVIKSAQ 71
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 1e-22
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 516
KPI+ + RL K + L+E + + + LV+V G + K K+
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIV-GDGEEEK-----------KLK 49
Query: 517 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 576
+L L+ ++ ELYR IAD FV P+ YE FGL ++EAM G+P
Sbjct: 50 KLALKLGLEDNVIFVGFV-PDEDLIELYR-IAD---LFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 577 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634
AT GGPAEI++ G +G +DP + AE + ++ +++ + KR
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKL----LKDEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 2e-21
Identities = 90/472 (19%), Positives = 159/472 (33%), Gaps = 112/472 (23%)
Query: 183 LPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242
P GG ++L+ RAL +G +++ ++T E V
Sbjct: 10 PPSVGGAERHVLELARAL--------AARGHEVT----VLTPGDGG------LPDEEEVG 51
Query: 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 302
G + P + +L + + L + D + +
Sbjct: 52 G--IVVVRPPPLLRVRRLLLLLLLALRLRRLL--------------RRERFDVVHAHDWL 95
Query: 303 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADF 362
L A+L A +GI H LE K + + A+ AD
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLE----FGRPGNELGLLLKLARALER----RALRRADR 147
Query: 363 IIT-STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPY 421
II S T+ + + G+ K ++ G D + + P
Sbjct: 148 IIAVSEA-----TREELREL---------------GGVP--PEKITVIPNGVDTERFRPA 185
Query: 422 SEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481
+R + +P++ + RL K + L+E
Sbjct: 186 PRAARRRLGI----------------------PEDEPVILFVGRLVPRKGVDLLLEAL-- 221
Query: 482 NSQLRELVNLV--VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR 539
++LR+ V V+ G D E+E L L + ++ +
Sbjct: 222 -AKLRKEYPDVRLVIVG--------DGPLREELE---ALAAELGLGDRVTFLGFVPDEDL 269
Query: 540 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 599
LY AD FV P+ YE FGL ++EAM GLP A+ GG E++E G +G +
Sbjct: 270 P-ALYA-AAD---VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP 324
Query: 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
P P+ AE + ++P +++ + +R+ ER++W + R +
Sbjct: 325 PGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRVAARTEEV 372
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 93.5 bits (231), Expect = 2e-20
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 24/244 (9%)
Query: 408 IVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 467
+++ + ++ + I+ F P +G L + K +V + RLD
Sbjct: 154 VIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPA----RIGLLPEGGKFVVLYVGRLD 209
Query: 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527
K + L+E K + + LV+V + REE+ ++ K L K G
Sbjct: 210 PEKGLDLLIEAAAKLKKRGPDIKLVIVGD-----GPERREELEKLAKKLGLEDNVKFLGY 264
Query: 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 587
EL +A FV P+ E FGL ++EAM G P A+ GG E
Sbjct: 265 VPDE----------ELAELLASAD-VFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPE 313
Query: 588 IIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647
++E G +G + P ++ A+ + E+P +++ + +R+ E ++W+ +E+
Sbjct: 314 VVEDGETGLLVPPGDVEELADALEQLL----EDPELREELGEAARERVEEEFSWERIAEQ 369
Query: 648 LMTL 651
L+ L
Sbjct: 370 LLEL 373
|
Length = 381 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-16
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 31/235 (13%)
Query: 418 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477
Y ++ + ++ P E + L +P + ++ KN+ L+E
Sbjct: 158 YLGVPPD--KIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLE 215
Query: 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 537
+ + LV+V G E++ ++ L + R+
Sbjct: 216 AFARLPAKGPDPKLVIV-GKRG----------WLNEELLARLRELGLGDRVRF----LGY 260
Query: 538 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA---TCHGGPAEIIEHGAS 594
+ EL + AFV P+ YE FGL V+EAM CG P A + E+ G +
Sbjct: 261 VSDEELAALYRGAR-AFVFPSLYEGFGLPVLEAMACGTPVIASNISSL---PEVA--GDA 314
Query: 595 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649
+ DP P+ A + E+P+ +++ + GL R +R++W+ + R +
Sbjct: 315 ALYFDPLDPEALAAAIERLL----EDPALREELRERGLAR-AKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 425 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484
+++T + ++ F P E K ++ + RL K + L+E + +
Sbjct: 170 PEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK 229
Query: 485 LRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 543
R V+LV+V G RE + L L+ + ++ A + E+
Sbjct: 230 KRPDVHLVIVGDG-------PLREAL------EALAAELGLEDRVTFLGAVPHE----EV 272
Query: 544 YRYI--ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
Y AD FV P+ E FGL ++EAM CGLP AT GG EII G +G + P
Sbjct: 273 PAYYAAAD---VFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPG 329
Query: 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
P+ AE + +P W ++ +R+ ER++W+ +ERL+ L
Sbjct: 330 DPEALAEAILRLL----ADP--WLRLGRAARRRVAERFSWENVAERLLEL 373
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 21/231 (9%)
Query: 409 VSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDH 468
VS G D+ ++ ++ I+ +E + P++ ++ RL
Sbjct: 142 VSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIR-ALAEEPLELGIPPDGPVILAVGRLSP 200
Query: 469 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528
K L+ + + LV++ G D E+E L K L +
Sbjct: 201 QKGFDTLIRAFALLRKEGPDARLVIL-G--------DGPLREELEA---LAKELGLADRV 248
Query: 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 588
++ Q+N Y Y+ FV + YE F ++EAM G P AT GP EI
Sbjct: 249 HFLGFQSNP------YPYLKAAD-LFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREI 301
Query: 589 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639
+E G +G + P + A A +P ++++ +R+ Y
Sbjct: 302 LEDGENGL-LVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREY 351
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 1e-14
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 16/196 (8%)
Query: 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513
DRS+P + + R+ K + L++ + + V +V+ AG + D E+AE E
Sbjct: 198 DRSRPYILFVGRITRQKGVPHLLDAV---HYIPKDVQVVLCAG------APDTPEVAE-E 247
Query: 514 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 573
+ + WI + EL FV P+ YE G+ +EAM C
Sbjct: 248 VRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE----VFVCPSIYEPLGIVNLEAMAC 303
Query: 574 GLPTFATCHGGPAEIIEHGASGF--HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 631
G P A+ GG E++ G +GF D D +A +P KK+ G
Sbjct: 304 GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAG 363
Query: 632 LKRIYERYTWKIYSER 647
KR E ++W +++
Sbjct: 364 RKRAEEEFSWGSIAKK 379
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 9e-13
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 553 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 612
FV P+ E FGL V+EAM GLP A GGPA+I+ G +G ++P + A +A
Sbjct: 269 VFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA 328
Query: 613 FFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649
+P ++++ ER +W+ + + L+
Sbjct: 329 LL----ADPELRRRMAARARAEA-ERRSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 6e-12
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 22/176 (12%)
Query: 424 KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK-N 482
+ +HG LL + + + RL K + L+E +
Sbjct: 75 GIPLVLTVHGVNRSLLEGVPLSLLALS----IGLADKVFVGRLAPEKGLDDLIEAFALLK 130
Query: 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 542
+ +L +V+AG + + A + + +
Sbjct: 131 ERGPDLK--LVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLA------------ 176
Query: 543 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598
L AD FV P+ E FGL V+EAM CGLP AT GGP EI+E G +G +
Sbjct: 177 LLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 7e-12
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 25/192 (13%)
Query: 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 511
SD + ++ RL K L+E + K ++ L +V G D E
Sbjct: 173 SSDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIV-G--------DGPEREA 223
Query: 512 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM 571
+E L+K L+ + + N + Y A FV + +E F + ++EAM
Sbjct: 224 LEA---LIKELGLEDRVILLGFTKN------IEEYYAKAS-IFVLTSRFEGFPMVLLEAM 273
Query: 572 TCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 630
GLP + C GP+EIIE G +G + + AE + E+ K++
Sbjct: 274 AFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGAN 329
Query: 631 GLKRIYERYTWK 642
+ ER++ +
Sbjct: 330 ARESA-ERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 2e-11
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 21/188 (11%)
Query: 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 514
K I+ + RL K + L+E + K ++ +LV+ AG + +
Sbjct: 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVI-AGPDEGG---------YRAE 250
Query: 515 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 574
+ ++ L+ + + + L AD FV P+ E FG+ V EA+ CG
Sbjct: 251 LKQIAAALGLEDRVTFTGMLYGEDKAAALAD--AD---LFVLPSHSENFGIVVAEALACG 305
Query: 575 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634
P T E+IE+G G+ +D D A + E P K + + G
Sbjct: 306 TPVVTTDKVPWQELIEYGC-GWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRAL 359
Query: 635 IYERYTWK 642
+ ER++W
Sbjct: 360 VEERFSWT 367
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 5e-10
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 607
AD FV P+ E F T +EA+ CG P A GG +I++HG +G+ P P+ A
Sbjct: 265 AD---VFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLA 321
Query: 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647
E + +P +++ + + + ++ ++R
Sbjct: 322 EGIE----WLLADPDEREELGEAARELAENEFDSRVQAKR 357
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 8e-10
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
E + + + + E FGL ++EAM CG P A G E++E G +GF +D
Sbjct: 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS- 294
Query: 602 HPDQAAELMAD 612
++ A +A
Sbjct: 295 -VEELAAAVAR 304
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 2e-09
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 511 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEA 570
E L + L ++ Q + EL IAD F+ P+ E+FGL +EA
Sbjct: 238 ERSPAERLARELGLQDDVLFLGKQDHVE---ELLS-IADL---FLLPSEKESFGLAALEA 290
Query: 571 MTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 630
M CG+P A+ GG E+++HG +GF +D E MA++ E+ W++ S
Sbjct: 291 MACGVPVVASNAGGIPEVVKHGETGFLVDVGD----VEAMAEYALSLLEDDELWQEFSRA 346
Query: 631 GLKRIYERY 639
R ER+
Sbjct: 347 ARNRAAERF 355
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 3e-09
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 22/196 (11%)
Query: 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513
P+ +ARL K + L+E V L++V G D + I EIE
Sbjct: 185 PEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEE---NPAAILEIE 240
Query: 514 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 573
K+ L+G+ ++ + + EL AD FV P++ E ++EAM
Sbjct: 241 KLG-------LEGRVEFLGFRDDVP---ELLA-AAD---VFVLPSYREGLPRVLLEAMAM 286
Query: 574 GLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 633
G P AT G E + G +GF + P + A+ + E+P ++ K
Sbjct: 287 GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARK 342
Query: 634 RIYERYTWKIYSERLM 649
R E + +I ++L+
Sbjct: 343 RAEEEFDEEIVVKKLL 358
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 2e-08
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ 77
R EL LLSRYV+QGK L H L+DE + D + + L + P ++I S Q
Sbjct: 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESPLGKLIFSTQ 54
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 552 GAFVQPAFYEAFGLTVVEAMTCGLP--TFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 609
+ + E FGL+++EA++ GLP ++ + GP+EIIE G +G+ + + AE
Sbjct: 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDV-NYGPSEIIEDGENGYLVPKGDIEALAEA 338
Query: 610 MADFFGKCKENPSHWKKISDGGLKRIYERYT 640
+ + +P +K S+ + ERY+
Sbjct: 339 IIELL----NDPKLLQKFSEAAYENA-ERYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 459 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518
++ ++ RL K+ L++ + K + L++ D A +E++
Sbjct: 190 VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAG---------DGPLRATLERL--- 237
Query: 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 578
+K L + + + + + A Y AD FV + +E FGL V EAM C LP
Sbjct: 238 IKALGLSNRVKLLGLRDDIA---AYYN-AADL---FVLSSAWEGFGLVVAEAMACELPVV 290
Query: 579 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614
AT GG E++ G SG + P+ A + +
Sbjct: 291 ATDAGGVREVV--GDSGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 3e-08
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI--- 598
ELY+ IAD V P+F+E +E M GLP T G +E+IE G +G+ I
Sbjct: 296 ELYQ-IADVG---VLPSFHEQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIK 351
Query: 599 -DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
+ + + + K + K++ +R E+Y+ ++ E + +L
Sbjct: 352 EYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMRENMKSL 405
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 619
E F L + EA+ G+P A+ GG AE++ G +G P + A + +
Sbjct: 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----D 328
Query: 620 NPSHWKKISDGGLKRIY-----ERYTWKIYSE 646
+P +++ G E Y K+Y
Sbjct: 329 DPDLLERLRAGIEPPRSIEDQAEEYL-KLYRS 359
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 4e-08
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 554 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 613
FV P+ E T++EAM GLP AT GG E+++HG +G + P A +A
Sbjct: 276 FVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----PPGDAVALARA 331
Query: 614 FGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655
+P+ + G R ++++ AG+Y
Sbjct: 332 LQPYVSDPAARRAHGAAGRARAEQQFSINAMVAA---YAGLY 370
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 553 AFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQA 606
FV P+ E + ++EAM GLP +T G E++E G +G + P P+
Sbjct: 258 LFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEAL 317
Query: 607 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648
A+ + ++P +++ + G R+ E + + + RL
Sbjct: 318 ADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 619
E FG+ +EAM G P A GGP E + G +GF +P P++ AE M
Sbjct: 309 NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----N 363
Query: 620 NPSHWKKISDGGLKRIYERYTWKIYSERL 648
+P ++ G KR+ E+++ + ++ERL
Sbjct: 364 DPDLADRMGAAGRKRVKEKFSTEAFAERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 3e-07
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 620
E + ++EA G+P AT HGG E +E G +G + D AA +A G+ +
Sbjct: 281 EGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEG--DVAA--LAAALGRLLAD 336
Query: 621 PSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
P ++ G +R+ ER+ + + +L L
Sbjct: 337 PDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 3e-07
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 554 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 613
FV + E F ++EAM CGLP AT G AE++ G +GF + P P+ AE +
Sbjct: 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELV--GDTGFLVPPGDPEALAEAIEAL 329
Query: 614 FGKCKENPSHWKKISDGGLKRIYERY 639
+P+ + + + +RI E +
Sbjct: 330 L----ADPALRQALGEAARERIEENF 351
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 4e-07
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
EL A + AF+ PA E FG+ VEAM G P A GG E + G +G +
Sbjct: 254 ELRDLYARAR-AFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQ 311
Query: 602 HPDQAAELMADF 613
+ A + F
Sbjct: 312 TVESLAAAVERF 323
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 7e-07
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 620
E+FGL +EAM CG+P A+ GG E++EHG +GF D + AE E+
Sbjct: 283 ESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLL----ED 338
Query: 621 PSHWKKISDGGLKRIYERY 639
++ S +R ER+
Sbjct: 339 EELLQRFSAAARERAKERF 357
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 9e-07
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMA 611
EAFG T VEA G P A+ HGG E + G +G + P AE +A
Sbjct: 275 EAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----PPGDAEALA 321
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 30/214 (14%)
Query: 440 FDPEQNDEHVGTLSDRSKPIVF-SMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGY 497
F+P D+ L V + RL KN+ L+ + + + V LV+V G
Sbjct: 184 FEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP 243
Query: 498 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY--IADTKGAFV 555
+REE+ EL + L + + EL Y AD FV
Sbjct: 244 -------EREEL------EELARELGLADRVIFTGFVPRE----ELPDYYKAAD---LFV 283
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615
+ E GL ++EAM GLP A G +++ G +GF P A L
Sbjct: 284 FASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEAL-----L 338
Query: 616 KCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649
+ ++P +++S + E++++ E+L
Sbjct: 339 RLLQDPELRRRLSKNAEES-AEKFSFAKKVEKLY 371
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 4e-06
Identities = 38/195 (19%), Positives = 76/195 (38%), Gaps = 15/195 (7%)
Query: 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513
+ ++ R+ K + L++ + K + + LVVV +K + ++
Sbjct: 190 SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249
Query: 514 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 573
+ + + R I Y +AD V EAF + VEAM
Sbjct: 250 EAAKRIGD-------RCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAA 300
Query: 574 GLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632
G P A+ GG E + G +G+H+ +P D + + +P +I++
Sbjct: 301 GKPVLASTKGGITEFVLEGITGYHLAEPMTSDS----IISDINRTLADPEL-TQIAEQAK 355
Query: 633 KRIYERYTWKIYSER 647
++ +Y+W+ ++R
Sbjct: 356 DFVFSKYSWEGVTQR 370
|
Length = 380 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-05
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASGFHIDPYHPDQAAELMADFF 614
E L ++EAM G+P AT G E+IE G +G + P P+ A +
Sbjct: 381 EGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAIL--- 437
Query: 615 GKCKENPSHWKKISDGGLKRIYERYTW 641
+ ++P + + + G KR+ YT
Sbjct: 438 -RLLKDPELRRAMGEAGRKRVERYYTL 463
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 68/272 (25%), Positives = 94/272 (34%), Gaps = 40/272 (14%)
Query: 389 LPGLYRVVHGIDVF-DPKF------NIVSPGADMDIYFPYSEK-QKRLTALHG------- 433
+PG R VH +D F DP+ IV D S L A G
Sbjct: 110 IPGFVRTVHHLDDFDDPRLAACQERAIVEA----DAVLCVSAAWAAELRAEWGIDATVVP 165
Query: 434 ---SIEQLLFDPEQNDEHVGT-LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV 489
+ + D + L R P V ++ ++ KN L+E + R
Sbjct: 166 NGVDAARFSPAADAADAALRRRLGLRGGPYVLAVGGIEPRKNTIDLLEAFALLRARRPQA 225
Query: 490 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 549
LV+ G + R E EL LD I A LYR AD
Sbjct: 226 QLVIAGGATLFDYDAYRREFEAR--AAEL----GLDPGAVVITGPVPDADLPALYR-CAD 278
Query: 550 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 609
AF P+ E FGL V+EA+ G+P A+ E + DP PD A+
Sbjct: 279 ---AFAFPSLKEGFGLVVLEALASGIPVVASDIAPFTEYLGRF-DAAWADPSDPDSIADA 334
Query: 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTW 641
+A +P+ + G + RYTW
Sbjct: 335 LALAL-----DPARRPALLAAGP-ELAARYTW 360
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 24/121 (19%)
Query: 523 KLDGQFRWIAAQT-NRAR-----NGELYRYI---ADTKGAFVQPAFYEAFGLTVVEAMTC 573
+L+ R +A + R + L I AD + P+ +E GLT + AM
Sbjct: 332 ELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD---FILMPSRFEPCGLTQLYAMRY 388
Query: 574 GLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQ---AAELMADFFGKCKENPSHW 624
G GG A+ + G +GF + Y P A + +++PS W
Sbjct: 389 GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLY---RQDPSLW 445
Query: 625 K 625
+
Sbjct: 446 E 446
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 542 ELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFAT--CHGGPAEIIEHGASGFHI 598
E +A F EAFG+ ++EAM G P +T GG + HG +G +
Sbjct: 256 EKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY-VNLHGVTGLVV 314
Query: 599 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640
P P AE + E+P +++ + +R E +T
Sbjct: 315 PPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFT 352
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 8e-04
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 555 VQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 613
P++ E+FGL +EA CG P A GG + G +G +D + P A+ +A
Sbjct: 307 AVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARL 365
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 9e-04
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 567 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 626
+ E M G P A+ G AE++E +G + P P+ A + + ++P +
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILEL----LDDPEERAE 371
Query: 627 ISDGGLKRIYERYTWKIYSERL 648
+ + G + + E+++ + +ERL
Sbjct: 372 MGENGRRYVEEKFSREKLAERL 393
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 46/246 (18%)
Query: 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVF 461
P+ I+ P D P S K + L+ IE +L E G +R P +
Sbjct: 151 VPPRKVIIPPSID-----PLSGKNRELS--PADIEYIL-------EKYGIDPER--PYIT 194
Query: 462 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 521
++R D K+ G+++ Y K + LV+V + D E + + E+++
Sbjct: 195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSG-----ATDDPEGWIVYE--EVLEY 247
Query: 522 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAF-------VQPAFYEAFGLTVVEAMTCG 574
+ D I T + A +Q + E FGLTV EA+ G
Sbjct: 248 AEGDPD---IHVLTLPPVSDLEV-------NALQRASTVVLQKSIREGFGLTVTEALWKG 297
Query: 575 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634
P A GG IE G +GF +D ++AA + +P +K+ +
Sbjct: 298 KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILYLL----RDPELRRKMGANAREH 351
Query: 635 IYERYT 640
+ E +
Sbjct: 352 VRENFL 357
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 554 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII---EHGASGFHIDPYHPDQAAEL 609
FV P+ E G V+EAM G+P A GG +II + G +GF P D E
Sbjct: 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
|
Length = 465 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 567 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 626
++EAM+ G+P AT GG EI+++G +G + EL K +N ++
Sbjct: 327 IMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSK--DPTPNEL-VSSLSKFIDNEEEYQT 383
Query: 627 ISDGGLKRIYERY 639
+ + ++ E +
Sbjct: 384 MREKAREKWEENF 396
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 553 AFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHP---DQAAE 608
A + + +E F +T++EAM+ G+P ++ C GP +II+ G +G + Y P D+
Sbjct: 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNG---ELYTPGNIDEFVG 316
Query: 609 LMADFF 614
+
Sbjct: 317 KLNKVI 322
|
Length = 359 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 696 | |||
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.97 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.96 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.94 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.91 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.9 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.88 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.88 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.87 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.86 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.83 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.82 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.8 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.79 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.79 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.78 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.76 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.74 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.7 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.67 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.6 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.59 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.55 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.4 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.39 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.34 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.31 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.29 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.25 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.24 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.24 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.23 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.22 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.08 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.07 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.98 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.97 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.87 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.83 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.77 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.76 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.6 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.55 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.4 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.36 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.35 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.32 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.3 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.12 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.07 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.99 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.99 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.95 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.91 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 97.76 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.72 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.62 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.51 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 97.46 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 97.43 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.42 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.38 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.31 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.27 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 97.19 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.09 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.98 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.93 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.84 | |
| PLN02208 | 442 | glycosyltransferase family protein | 96.8 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.71 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.6 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.59 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.5 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.45 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.29 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.27 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.19 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.19 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.12 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.12 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 95.68 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 95.66 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 95.37 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.34 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 93.92 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 92.73 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 91.96 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 91.88 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 91.01 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 90.79 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 90.4 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 89.05 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 88.9 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 88.8 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 87.84 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 87.84 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 87.51 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 87.43 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 86.09 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 85.49 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 84.65 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 84.63 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 84.14 | |
| PLN02764 | 453 | glycosyltransferase family protein | 83.4 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 82.68 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 81.84 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 81.46 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 80.61 |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-160 Score=1376.20 Aligned_cols=696 Identities=82% Similarity=1.304 Sum_probs=673.9
Q ss_pred CCCCCCCCccchhhhhHHHHhhcHHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh---
Q 005444 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ--- 77 (696)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 77 (696)
|++++|+|++||+|||+++|++|||+|++|||||+++||++||+|||++|||++++++.+++|+.+|+||++|++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence
Q ss_pred --------------------------------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 005444 78 --------------------------------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 125 (696)
Q Consensus 78 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (696)
+|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 899999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHH
Q 005444 126 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 205 (696)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~ 205 (696)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|.||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHH
Q 005444 206 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 285 (696)
Q Consensus 206 ~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i 285 (696)
++|+++||+|+|+|+|+||.+++..+++|+++.|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEe
Q 005444 286 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 365 (696)
Q Consensus 286 ~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 365 (696)
.+..+++||+||+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..+..|+|++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 366 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 366 ~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+|.++++++++.++||++|.+|+||++|++++|++++++|++|||||+|...|+|+.....+.+.+++++++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888889999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
++++|++.++++++|+++||+++.||++.|++|++++.+++++++|+|||++.++..+.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999888888999999999999999999999999998777889999999986556667788888889999999999999
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhcccccc
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLV 685 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (696)
+|++|.+++++|..||+.|++|+++|++++.++|||+.++++++++..+||||+++++++|+|++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCC
Q 005444 686 KSVPLASENQH 696 (696)
Q Consensus 686 ~~~~~~~~~~~ 696 (696)
++||+++|+++
T Consensus 802 ~~~~~~~~~~~ 812 (815)
T PLN00142 802 KTVPLAVDDPQ 812 (815)
T ss_pred hcCCcccccCC
Confidence 99999999764
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-151 Score=1299.34 Aligned_cols=668 Identities=75% Similarity=1.235 Sum_probs=646.8
Q ss_pred HHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh--------------------------
Q 005444 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ-------------------------- 77 (696)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 77 (696)
||+|++|||||+++||++||+|||++||+++++++.+++++.+|+||++|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 799999999999999999999999999999997777889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence
Q ss_pred ---------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCC
Q 005444 78 ---------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 148 (696)
Q Consensus 78 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 148 (696)
+|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCC
Q 005444 149 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 228 (696)
Q Consensus 149 ~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~ 228 (696)
||++||+|++||||+|||++||+||+++|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccceeeecCCCceEEEEecccCccc-ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHH
Q 005444 229 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 307 (696)
Q Consensus 229 ~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a 307 (696)
..++.|+++.+.+.++++++|+|+||++..+ ++++|++++++|||+..|+.++.+.+..+.+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 8899999999999999999999999999877 789999999999999999999999998777789999999999999999
Q ss_pred HHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccc
Q 005444 308 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 387 (696)
Q Consensus 308 ~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~ 387 (696)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred cccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEcccc
Q 005444 388 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 467 (696)
Q Consensus 388 ~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 467 (696)
|||++|++++|++++++|++|||||+|.+.|+|+.....+....++.+++++|++.++++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998889999999999999
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 547 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 547 (696)
+.||++.|++|+++++.+.++++|+|+|++.++..+.|.++.++.++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999887677888999999999999999999999999999877677788999998
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 548 a~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.++.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhcccccccccccc
Q 005444 628 SDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 691 (696)
Q Consensus 628 ~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (696)
+++|++++.++|||+.++++++++..+||||+++++++|++++|||||||+|||||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-125 Score=1009.30 Aligned_cols=435 Identities=75% Similarity=1.188 Sum_probs=370.7
Q ss_pred CCccchhhhhHHHHhhcHHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh---------
Q 005444 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ--------- 77 (696)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 77 (696)
||++||||||+|+|++|||+|++|||||+++||++||+|||++||+++++++.++.+..+|+||++|++||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999997777778888899999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence
Q ss_pred --------------------------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH
Q 005444 78 --------------------------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 131 (696)
Q Consensus 78 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (696)
+|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHc
Q 005444 132 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 211 (696)
Q Consensus 132 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~ 211 (696)
+||+|||++|+|+|+||||++||+|++||||+|+||++||||||+|+||+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCC
Q 005444 212 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 291 (696)
Q Consensus 212 G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~ 291 (696)
|.+|.|+|+|+||.+|++.|++|+++.+++.+++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
+||+||+||+++|++|+++++++|+|+|+|+|+++++||+.++++|+.++.+|||+|+|+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 441 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 441 (696)
+++++.+|||+||.+||||++|++++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
|
4.1.13 from EC in the following reaction: |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=527.07 Aligned_cols=491 Identities=42% Similarity=0.640 Sum_probs=433.9
Q ss_pred hhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcC
Q 005444 80 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 159 (696)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 159 (696)
|.||++++...+|+++.+|+..++.. .+||+..|.+.+++.++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999988
Q ss_pred CCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcccccee
Q 005444 160 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 239 (696)
Q Consensus 160 ~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e 239 (696)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|++++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999998765 3455
Q ss_pred eecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEE
Q 005444 240 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 319 (696)
Q Consensus 240 ~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v 319 (696)
...++.+++|+++|+ ++..+|+ +.+||++..|+ .+...+.+.+.+ ||++|.|+++++..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 556667899999999 3455677 88999999988 556667676677 999999999999999999999999999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccc-cceeecc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 398 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~-l~~~~~g 398 (696)
++.|.++..++..++..|+.+...|+++++|.++...++++| +++++++++++....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 9999999
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
++++.++++.+++|-|.+.+.|.-. .+++.+.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcccCC-----------------------------------------
Confidence 9999999999999999988877211 11111000
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
...++.+++++|+. ..+++++|+.++.++|+++++++++.++++|.-. ..+..+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~--G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR--GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCC--CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 12245667776632 1457899999999999999999999655555532 3334566999999888899999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH---HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 559 ~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e---~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
. |.||++++|||+||+|||||+.||+.|+|.++.+||+++| +.+ .+|++| .+|..||++|.+|+++|+++|
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 444 355555 566699999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhccc
Q 005444 636 YERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 682 (696)
Q Consensus 636 ~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (696)
++.|||+++.+++.++...|.+|+.++..++...+||++|||.|+|+
T Consensus 449 ~e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 449 KEMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999986
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=550.04 Aligned_cols=456 Identities=25% Similarity=0.456 Sum_probs=353.5
Q ss_pred eeEEEEEccccccCCccc-CC-CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--CCccceeEEEeCCCCCC-CCCccccc
Q 005444 163 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 237 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~-lG-~p~tGG~~vyv~~~~raL~~~L~~~L~~~G--~eV~~~ilV~T~~~~~~-~g~~~~~~ 237 (696)
-|+|++||+||.|+.+++ +| .+|||||++||+ +|+++|+++| |+|+ |+||.+.++ .+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 588999999999998886 88 599999999999 5555568888 7888 999998653 34446655
Q ss_pred eeee------------cCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHH-------h----CCCCe
Q 005444 238 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 294 (696)
Q Consensus 238 ~e~i------------~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~-------~----~~~pD 294 (696)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|+..+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5333 34468999999999863 26889999999999999988876531 1 12499
Q ss_pred EEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCC----CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 295 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 295 vIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~----~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
|||+|||+++.++.++++.+++|+|+|.|+++..++. .+...+...+..|++..++.+|..++..||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877653 223345566777888999999999999999999999999
Q ss_pred Hhhccccccccccccccccccccee-----ecc---cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRV-----VHG---IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 442 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~-----~~g---i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~ 442 (696)
++ +||..|..|. |.++++ ..| .+.+.+++.|||||+|.+.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3455444444 555444 223 33457799999999999999986432211000 000000000
Q ss_pred ccc-c-cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC--CeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 443 EQN-D-EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 443 ~~~-~-~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~--~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
... . +....+.++++++|+++||+++.||++.|++||+.+++..+ ++. +|+|++++ ..........+...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHHH
Confidence 000 0 00112237889999999999999999999999999875433 444 46676643 111111123446778899
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHcc---ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeE
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADT---KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASG 595 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~a---advfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G 595 (696)
++++++.++|.|+| .++.+++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.+|
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nG 616 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNG 616 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcE
Confidence 99999999999999 66678888888742 279999999999999999999999999999999999999999999
Q ss_pred EEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 596 ~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
++++|.|++++|++|.+++ .|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 617 lLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 617 LLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999997766 89999999999999998 5799999999999988754
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-52 Score=467.52 Aligned_cols=426 Identities=29% Similarity=0.546 Sum_probs=316.9
Q ss_pred eEEEEEccccccCCcc-cCCC-CCCCchhHHHHHHHHHHHHHHHHHHHHcCC--CccceeEEEeCCCCCCC-CCccccce
Q 005444 164 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 238 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~-~lG~-p~tGG~~vyv~~~~raL~~~L~~~L~~~G~--eV~~~ilV~T~~~~~~~-g~~~~~~~ 238 (696)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.++... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 6775 99999999999 66667799997 899 9998765421 12232233
Q ss_pred eeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE
Q 005444 239 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318 (696)
Q Consensus 239 e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~ 318 (696)
+.+ .+++.|+|+|+.+. .|.+....++++..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 24799999998653 24555667888888777777666432 34799999999888899999999999999
Q ss_pred EEEecCCCccCCC---CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccccccccccccccee
Q 005444 319 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 395 (696)
Q Consensus 319 v~t~H~l~~~~~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~ 395 (696)
|+|.|+....+.. .....+..+...|.+......+..+++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111122222333444444445778999999999999765431 0 111
Q ss_pred ecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 396 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 396 ~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
..+++ +.|+.+||||+|.+.|.|......... +.+ ....++. ++++++|+|+||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~-----~~~-------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSE-----IDN-------LLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchh-----HHH-------HHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11232 679999999999999887532211000 000 0011222 5667899999999999999999
Q ss_pred HHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc---c
Q 005444 476 VECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT---K 551 (696)
Q Consensus 476 lea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a---a 551 (696)
++|++++....+..+++ |+|+|++ ......+..++.+++..+++++++.++|+|+| .++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcC
Confidence 99998754333334554 5576654 12222222344566788899999999999999 66678899888842 2
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 552 GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 552 dvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
|+||+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|++++|+|+++++++|.+++ +||+.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999997776 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 005444 632 LKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 632 ~~~v~~~ysw~~~a~~l~~ly 652 (696)
++++.++|||+.++++|++++
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=410.88 Aligned_cols=427 Identities=18% Similarity=0.209 Sum_probs=290.6
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-cceeee-
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 241 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-~~~e~i- 241 (696)
|||++||.+.+|. ..+||+..+|. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999999864 45899999999 66667799999999 999886543211000 000000
Q ss_pred --------cCCCceEEEEecccCcccccccccccCCCcccH---HH---HHHHHHHHHHHHhCCCCeEEEEeCCCchHHH
Q 005444 242 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ET---FTEDVGSEITAELQGFPDFIIGNYSDGNLVA 307 (696)
Q Consensus 242 --------~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l---~~---f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a 307 (696)
...+++++++++... +..+..++.+. .+ |...+...+ .....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~-~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFA-EGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHH-HhcCCCCceEEECCcHHHHHH
Confidence 112467777776522 12233344332 22 333333333 334679999999999999998
Q ss_pred HHHhhcC-----CCcEEEEecCCCccCCCC------CCccHhhh-hhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcc
Q 005444 308 SLLAYKM-----GITQCTIAHALEKTKYPD------SDIYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375 (696)
Q Consensus 308 ~lla~~~-----gip~v~t~H~l~~~~~~~------s~~~~~~~-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 375 (696)
.++++.+ ++|+|+|+|++....... ..+.+..+ .....+...+...+.+++.||.|+|+|+..++...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 799999999985432110 00011000 00111111223345678999999999998765433
Q ss_pred cccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCC
Q 005444 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDR 455 (696)
Q Consensus 376 ~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~ 455 (696)
.. + .++.+.+. ++....|+.+||||+|.+.|.|..+.......-...++.+...+...++.+|+. ++
T Consensus 214 ~~---~---~~~gl~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TP---E---FGYGLEGL------LRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred cc---c---CCcChHHH------HHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 21 0 00111110 112256899999999999998864321000000000111111223345567873 34
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-eccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQ 534 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f-lG~~ 534 (696)
+.++|+++||+.++||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC-
Confidence 789999999999999999999999998753 799999998854 23567888888886 35654 552
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC------CeEEEECCCCHHHHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAAE 608 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg------~~G~l~~p~d~e~la~ 608 (696)
+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|++++++
T Consensus 346 ----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 346 ----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred ----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 3344556777 5999999999999999999999999999999999999999888 8999999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+|.+++. +..|++.+.+|++++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 9988763 33578889999988863 789999999999999873
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=409.52 Aligned_cols=458 Identities=15% Similarity=0.169 Sum_probs=313.8
Q ss_pred HHHhhcCCCcchHHHHhc--CC--CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 005444 141 LLDILQAPDPSTLEKFLG--RL--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216 (696)
Q Consensus 141 ~~~~~~~p~~~~~~~~~~--~~--p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~ 216 (696)
-.++.+.+|...+..|+. +- .+.|||++||....|- ..+||...++. .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345667888777777764 22 2459999999998864 57999999999 66666799999999
Q ss_pred ceeEEEeCCCCCCCCCccc-c-----cee-eecC-----------CCceEEEEecccCcccccccccccCCCccc---HH
Q 005444 217 PKILIVTRLIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWPY---LE 275 (696)
Q Consensus 217 ~~ilV~T~~~~~~~g~~~~-~-----~~e-~i~~-----------~~~v~I~rvp~~~~~~~~~~wisr~~i~p~---l~ 275 (696)
|+++.++........ . ... .+.+ .+|+.++.+...... .+..|..++.+ ..
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643210000 0 000 0000 023333333210000 01223344422 22
Q ss_pred H---HHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhh------cCCCcEEEEecCCCccCC-CCC-----CccHhhh
Q 005444 276 T---FTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY------KMGITQCTIAHALEKTKY-PDS-----DIYWKKF 340 (696)
Q Consensus 276 ~---f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~------~~gip~v~t~H~l~~~~~-~~s-----~~~~~~~ 340 (696)
+ |...++..+ .....+|||||||+|.+++++.++.. ..++|.|+|+|++..... +.. ++.+..+
T Consensus 592 RF~~FsrAaLe~~-~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELL-YQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 2 333333333 33467999999999999987554443 235789999999864432 111 1111111
Q ss_pred h--hhh--hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCC
Q 005444 341 D--EKY--HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 416 (696)
Q Consensus 341 ~--~~y--~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~ 416 (696)
. ... .+..++..-+..+..||.|+|+|+..+.+.... + +..|.+. +.....|+.+|+||||.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 0 000 111222223345667999999999987654321 1 1112111 233467999999999999
Q ss_pred CCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCC-CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEe
Q 005444 417 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495 (696)
Q Consensus 417 ~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG 495 (696)
.|.|..+..-....-...++.+..++...++++|+..+ ++.|+|+++||+.++||++.+++|+..+.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542110000011233444455566778898432 467999999999999999999999988764 479999999
Q ss_pred CccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC
Q 005444 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 575 (696)
Q Consensus 496 ~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl 575 (696)
+|+++ .+.+.++.+++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+
T Consensus 816 dGp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGt 881 (977)
T PLN02939 816 SSPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGS 881 (977)
T ss_pred CCCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCC
Confidence 99751 23567889999999999999999 555556677888 59999999999999999999999999
Q ss_pred cEEEcCCCCcchhhcc---------CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 576 PTFATCHGGPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 576 PVvat~~gG~~EiI~d---------g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
|+|++++||+.|+|.+ +.+||+|++.|+++++++|.+++..+..||+.|++|+++++ .++|||+.+++
T Consensus 882 PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~ 958 (977)
T PLN02939 882 VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSAS 958 (977)
T ss_pred CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHH
Confidence 9999999999999975 57999999999999999999988666679999999998765 37899999999
Q ss_pred HHHHHHHH
Q 005444 647 RLMTLAGV 654 (696)
Q Consensus 647 ~l~~ly~~ 654 (696)
+|+++|+.
T Consensus 959 qYeeLY~~ 966 (977)
T PLN02939 959 QYEELYQR 966 (977)
T ss_pred HHHHHHHH
Confidence 99999874
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=392.00 Aligned_cols=399 Identities=22% Similarity=0.318 Sum_probs=295.4
Q ss_pred EEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCC
Q 005444 166 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 245 (696)
Q Consensus 166 I~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~ 245 (696)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. .....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 578889988643 345566799999999 77777899999999 998764322111 111123
Q ss_pred ceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCC
Q 005444 246 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 246 ~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
++++.+++..+..+ .....+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111111122233333443333333468999999998888888888888999999999986
Q ss_pred CccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCc
Q 005444 326 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 405 (696)
Q Consensus 326 ~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k 405 (696)
...+.. ++...... ........+...++.+|.|+++|+...+...+. .+ ....+
T Consensus 135 ~~~~~~----~~~~~~~~-~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~--~~~~k 188 (405)
T TIGR03449 135 AAVKNA----ALADGDTP-EPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YD--ADPDR 188 (405)
T ss_pred HHHHHH----hccCCCCC-chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cC--CChhh
Confidence 432100 00000000 000111234567899999999998765421111 12 22578
Q ss_pred EEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhcc
Q 005444 406 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 485 (696)
Q Consensus 406 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~ 485 (696)
+.+||||+|.+.|.|...... +.++++ ++++++|+|+||+.+.||++.+++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 123555 56788999999999999999999999998776
Q ss_pred CCC--eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 486 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 486 ~~~--~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
.++ ++|+|+|++... ...+.+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0112567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 643 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~ 643 (696)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998776 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 005444 644 YSERLMTLAGV 654 (696)
Q Consensus 644 ~a~~l~~ly~~ 654 (696)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=399.60 Aligned_cols=430 Identities=18% Similarity=0.227 Sum_probs=295.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-----cce
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-----QRL 238 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-----~~~ 238 (696)
|||++||.+.+|- -.+||+..++. .|+++|+++||+|. |+|+.++........ ...
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998863 35899999999 66666799999999 999887643211000 000
Q ss_pred e--------e----ecCCCceEEEEecccCccccccccccc-CCCcc--c---HH---HHHHHHHHHHHHHhCCCCeEEE
Q 005444 239 E--------R----VSGTEHTHILRVPFRSEKGILRQWISR-FDVWP--Y---LE---TFTEDVGSEITAELQGFPDFII 297 (696)
Q Consensus 239 e--------~----i~~~~~v~I~rvp~~~~~~~~~~wisr-~~i~p--~---l~---~f~~~~~~~i~~~~~~~pDvIh 297 (696)
. . ....+++.++++..... ..| ..++. + .. .|...+...+.. ...+|||||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~-------~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH 133 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL-------FDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVH 133 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH-------cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEE
Confidence 0 0 01113466666543210 111 11221 1 22 344444444433 467999999
Q ss_pred EeCCCchHHHHHHhhcCC---CcEEEEecCCCccCC-CCCCc-----cHhhhh-hhhhccchhhhhHHhhhcCCEEEecc
Q 005444 298 GNYSDGNLVASLLAYKMG---ITQCTIAHALEKTKY-PDSDI-----YWKKFD-EKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 298 ~h~~~~~l~a~lla~~~g---ip~v~t~H~l~~~~~-~~s~~-----~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+|+|.+++++.+++...+ +|.|+|+|++..... +.... .+..+. ..+.+...+...+.++..||.|+|+|
T Consensus 134 ~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 134 AHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred ECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecC
Confidence 999999999998888776 999999999864321 11100 000000 01111112334566899999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+..++.+.... | ++.+.+. +.....++.+|+||+|.+.|.|..+......--...++.....+...++
T Consensus 214 ~~~~~ei~~~~--~----~~~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 214 PTYAREILTPE--F----GYGLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQE 281 (473)
T ss_pred HhHHHHhcCCc--C----CccchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHH
Confidence 98765433210 0 0111111 1112569999999999999988643210000000001111112233456
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
++|+..++++++|+++||+.++||++.+++|+.++.+. +++|+|+|+|.. .+.+.+++++++++ ++
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--Cc
Confidence 68875445889999999999999999999999998753 599999999853 23467777777764 56
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC------CeEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg------~~G~l~~p~ 601 (696)
+.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.
T Consensus 348 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVII----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEE----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 88877 456667778888 5999999999999999999999999999999999999999988 899999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++.....|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 9999999999887544459999999999886 3689999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-43 Score=410.58 Aligned_cols=406 Identities=15% Similarity=0.087 Sum_probs=282.3
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-cce-ee
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRL-ER 240 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-~~~-e~ 240 (696)
+|||++||.+..|- ..+||+..+|. .|+++|+++||+|. |+|+.++........ ... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999999864 35899999999 66666799999999 999987642100000 000 00
Q ss_pred e--c---------CCCceEEEEecccCcccccccccccCCCccc---HH---HHHHHHHHHHHHHhCCCCeEEEEeCCCc
Q 005444 241 V--S---------GTEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDG 303 (696)
Q Consensus 241 i--~---------~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~---l~---~f~~~~~~~i~~~~~~~pDvIh~h~~~~ 303 (696)
+ . ..+++.++.+.... + +..+..++.| .. .|...++..+. ....+|||||||+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 0 01234444443211 1 1222223322 22 33333443333 3367999999999999
Q ss_pred hHHHHHHhhc------CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccc
Q 005444 304 NLVASLLAYK------MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 377 (696)
Q Consensus 304 ~l~a~lla~~------~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 377 (696)
++++.+++.. .++|+|+|+|++.... . + -...+..||.|+|+|+..+..+..
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~--------n-------~------lk~~l~~AD~ViTVS~tya~EI~~- 778 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA--------N-------H------IGKAMAYADKATTVSPTYSREVSG- 778 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch--------h-------H------HHHHHHHCCEEEeCCHHHHHHHHh-
Confidence 9988888764 3589999999864211 0 0 123678999999999987653221
Q ss_pred cccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhh-cchhhhcCCccccccccCCCCCCC
Q 005444 378 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSDRS 456 (696)
Q Consensus 378 v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~~~~~l~~~~~~~~~~g~l~~~~ 456 (696)
. ..+.....|+.+|+||||.+.|.|..+.......-. .-++.+...+...++.+|+. +++
T Consensus 779 --~----------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 779 --N----------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred --c----------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0 112222469999999999999988643210000000 00001111222345568873 247
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEeccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L--~~~V~flG~~ 534 (696)
.|+|+++|||.++||++.|++|+..+.+ ++++|+|+|+|+++ .+.+.+.++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLT- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEec-
Confidence 8999999999999999999999998865 47999999999761 235678888998865 578999873
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC-------------CeEEEECCC
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 601 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg-------------~~G~l~~p~ 601 (696)
.+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||+|++.
T Consensus 908 ---~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 ---YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ---CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 32222346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++.+|.+++... ++....++..+++.+.+.|||+..+++|+++|+.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999998887422 3444556777777778899999999999999964
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-43 Score=394.66 Aligned_cols=439 Identities=17% Similarity=0.170 Sum_probs=297.5
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCc--ccc--
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 236 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~--~~~-- 236 (696)
|| |||+++|....|- ..|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999998864 57999999998 56666799999999 9998875432210 000
Q ss_pred ceeee--cCCCceEEEEec--ccCccc----cc--ccccccCCCc----------ccHHHHH---HHHHHHHHHHhCCCC
Q 005444 237 RLERV--SGTEHTHILRVP--FRSEKG----IL--RQWISRFDVW----------PYLETFT---EDVGSEITAELQGFP 293 (696)
Q Consensus 237 ~~e~i--~~~~~v~I~rvp--~~~~~~----~~--~~wisr~~i~----------p~l~~f~---~~~~~~i~~~~~~~p 293 (696)
....+ .-.....+.++- ..+..+ ++ ..+..|..++ ...++|+ ..+...+ .....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 00000 000011222210 000000 00 0112233332 1122332 2333333 3335699
Q ss_pred eEEEEeCCCchHHHHHHhhcC-------CCcEEEEecCCCccCCCCCCc-----cHhhhhhhhhccchhhhhHHhhhcCC
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDI-----YWKKFDEKYHFSCQFTADLIAMNNAD 361 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-------gip~v~t~H~l~~~~~~~s~~-----~~~~~~~~y~~~~~~~~e~~a~~~AD 361 (696)
||||+|+|.+++++.++++.. ++|.|+|+|++.......... .+........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999988887654 799999999975433211000 00100000011112334566889999
Q ss_pred EEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCC
Q 005444 362 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 441 (696)
Q Consensus 362 ~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 441 (696)
.|+|+|+..++++.+.. ...+.+++..+ ....|+.+|+||||.+.|.|..+...+..--.+.++.+..+
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998877543310 01122222211 12578999999999999998654211100000111122222
Q ss_pred ccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 442 PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 442 ~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
+...++.+|+..+++.++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~ 359 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHH
Confidence 3344556888667788999999999999999999999999875 4799999999864 245678888888
Q ss_pred cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc----CCeEEE
Q 005444 522 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGFH 597 (696)
Q Consensus 522 ~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d----g~~G~l 597 (696)
+ .++|.|.| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|+++.||+.|++.+ +.+|++
T Consensus 360 ~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l 432 (489)
T PRK14098 360 H--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFI 432 (489)
T ss_pred C--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeE
Confidence 7 47899999 666778889999 599999999999999999999999999999999999998864 679999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++|+++++++|.+++. +..|++.|+++++++. .++|||+..+++|+++|+.
T Consensus 433 ~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 433 FHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred eCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999999988763 5578999999887764 4789999999999999973
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=376.18 Aligned_cols=397 Identities=32% Similarity=0.540 Sum_probs=301.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+|++.|++|.. ..|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... . ....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~----~---~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP----I---VELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC----c---cccc
Confidence 5889999976532 245689999999999 66666799999999 888654332111 0 1112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788887764432 1233446667666766666666543 23899999999888888888999999999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
+...........+. +........+...++.+|.|+++|.......... . .....
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~--~~~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------Y--GAYPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------c--ccccc
Confidence 76543222111111 1112223346678899999999998765422111 0 11144
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.+||||+|.+.|.+........ +.++. .+++++|+|+||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998887654322111 11222 4567899999999999999999999999987
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+|+|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112345778888999999999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999997776 89999999999999999999999999
Q ss_pred HHHHH
Q 005444 645 SERLM 649 (696)
Q Consensus 645 a~~l~ 649 (696)
+++|+
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=384.27 Aligned_cols=435 Identities=16% Similarity=0.196 Sum_probs=285.2
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcccc--ceee
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 240 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~--~~e~ 240 (696)
.|||+++|....|- ..|||..-++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 48999999998865 57999999998 66667799999999 999887543210 000 0111
Q ss_pred ecC--CCceEEEEecccCccc--cc--ccccccCC-Cc---------ccHHHHH--HHHHHHHHHHh--CCCCeEEEEeC
Q 005444 241 VSG--TEHTHILRVPFRSEKG--IL--RQWISRFD-VW---------PYLETFT--EDVGSEITAEL--QGFPDFIIGNY 300 (696)
Q Consensus 241 i~~--~~~v~I~rvp~~~~~~--~~--~~wisr~~-i~---------p~l~~f~--~~~~~~i~~~~--~~~pDvIh~h~ 300 (696)
+.. ...+++....... -. ++ ..+..|.. ++ ...++|+ ..+.-++.... ..+|||||+|+
T Consensus 63 ~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 63 FPDLFGGPARLLAARAGG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred EeeeCCceEEEEEEEeCC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECC
Confidence 100 0011222111100 00 00 01122221 22 1223332 22222333222 46999999999
Q ss_pred CCchHHHHHHhh--cCCCcEEEEecCCCccCC-CCC-----CccHhhhh-hhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 301 SDGNLVASLLAY--KMGITQCTIAHALEKTKY-PDS-----DIYWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 301 ~~~~l~a~lla~--~~gip~v~t~H~l~~~~~-~~s-----~~~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
|.+++++.++.. ..++|.|+|+|++..... +.. .+.+..+. ....+.......+.++..||.|+|+|+..+
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999988877753 346899999999854331 100 01111100 000111111235667899999999999876
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
...++... .+.+.+. +.....|+.+|+||||.+.|.|..+.......-.+.++.+..++...++.+|+
T Consensus 222 ~ei~~~~~------g~gl~~~------l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEA------GMGLDGL------LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccC------CcChHHH------HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 64332100 0111110 01125689999999999999886542100000000011111122334556887
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-EE
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF-RW 530 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V-~f 530 (696)
..+++.++|+++||+.++||++.|++|+..+.+ .+++|+|+|+|.. .+.+.+++++++++ +++ .|
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEE
Confidence 545678899999999999999999999998865 4699999999854 23567788887764 445 78
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC---------CeEEEECCC
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPY 601 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg---------~~G~l~~p~ 601 (696)
+|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+
T Consensus 356 ~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 356 IGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV 429 (485)
T ss_pred eCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC
Confidence 884 45788877535999999999999999999999999999999999999999875 689999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++ .+..|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 430 d~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 430 TADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred CHHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHH
Confidence 9999999998754 24489999999999986 3789999999999999874
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=372.88 Aligned_cols=365 Identities=16% Similarity=0.193 Sum_probs=272.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+.. ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~--------~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGIR--------YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCcc--------ccc
Confidence 6899998776 45799999999 66777799999999 9987643221110 112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCch--HHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~--l~a~lla~~~gip~v~t~ 322 (696)
.++.+.++|+..... ....+....+...+.+.+. ..+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888888653211 1111111122222333332 348999999987653 346777888999999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+..... +...... . ......++++|.++++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~~~~----~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIHT----N-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhhHHh----h-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9853211 1000000 0 112346789999999998754310 0011222
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877664321 045678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 87789999999999876 567889999999999999999 6778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998763 44454 48999999998877 566666678899999999999999
Q ss_pred HHHHHHHHHHHH
Q 005444 643 IYSERLMTLAGV 654 (696)
Q Consensus 643 ~~a~~l~~ly~~ 654 (696)
.+++++.++|+.
T Consensus 356 ~~~~~~~~~y~~ 367 (398)
T cd03796 356 DVAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=374.34 Aligned_cols=396 Identities=12% Similarity=0.107 Sum_probs=283.8
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCC---ccccceee
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLER 240 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~---~~~~~~e~ 240 (696)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+....+.+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 45789999999 66777799999999 999762211111 00100111
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcE
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 318 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~ 318 (696)
.....+++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999998643210 00000 0111 112333333333332236899999998654 456778888899999
Q ss_pred EEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecc
Q 005444 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 398 (696)
Q Consensus 319 v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~g 398 (696)
++++|+.+............ ....++. ...+..+++.||.|+++|+...+..++ .+
T Consensus 135 v~~~~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKG--GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccC--cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999864321100000000 0000011 124667899999999999987653211 12
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
++ ..++.+||||+|.+.|.|....... ..++.+++ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 22 6689999999999888765321100 01123555 5677899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
+.++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999987 699999 6778899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCCCC--cchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 559 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 559 ~~E~----fGltvlEAMa~GlPVvat~~gG--~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.++.|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5778999999999999998877 468886 5999999999999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++.++|||+.++++++++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999874
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=382.79 Aligned_cols=432 Identities=17% Similarity=0.164 Sum_probs=293.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc--ccee---
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN--QRLE--- 239 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~--~~~e--- 239 (696)
||++||+..+|- ..+||...++. .|+++|+++||+|. |+|+.++........ ....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999988763 37899999999 66666799999999 999887653211000 0000
Q ss_pred ------------eecCCCceEEEEecccCccccccccc--ccCCCccc-HH---HHHHHHHHHHHHHhCCCCeEEEEeCC
Q 005444 240 ------------RVSGTEHTHILRVPFRSEKGILRQWI--SRFDVWPY-LE---TFTEDVGSEITAELQGFPDFIIGNYS 301 (696)
Q Consensus 240 ------------~i~~~~~v~I~rvp~~~~~~~~~~wi--sr~~i~p~-l~---~f~~~~~~~i~~~~~~~pDvIh~h~~ 301 (696)
......++.+++++...... +.++ +....|.. .. .|...+...+.. ...+|||||+|+|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECch
Confidence 00011356666665432111 0000 00111111 11 233344444433 3679999999999
Q ss_pred CchHHHHHHhhcC------CCcEEEEecCCCccCCCCCC------ccH--hhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 302 DGNLVASLLAYKM------GITQCTIAHALEKTKYPDSD------IYW--KKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 302 ~~~l~a~lla~~~------gip~v~t~H~l~~~~~~~s~------~~~--~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
.+++++.+++... ++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888887763 89999999998654321100 000 000011122334456778899999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
...++.+.+.-. ++.+.+ .+.....|+.+|+||+|.+.|.|..+............+.....+...++
T Consensus 219 ~~~~~~i~~~~~------~~gl~~------~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEF------GEGLDG------LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCC------CcchHH------HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 887654332100 000100 01122579999999999999988654321100000111122222334456
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
++|+..++++++|+|+||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.++++++++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 67775467899999999999999999999999998764 499999999854 3346677777765 567
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCC------eEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~------~G~l~~p~ 601 (696)
|.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|+++++.
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88766 344556667788 59999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
|+++++++|.+++. ...+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999998763 34578999999888764 57999999999999985
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=369.60 Aligned_cols=374 Identities=16% Similarity=0.229 Sum_probs=265.9
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceee
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 240 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~ 240 (696)
.++|||++++ +..| .+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 3468999997 3322 145799999999 66667799999999 888653211 00
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEE
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQC 319 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v 319 (696)
. .++.+++++..+. +. .... +....+...+.+.+. +.+|||||+|.+.. .+.+.++++..++|+|
T Consensus 107 ~---~g~~v~~~~~~~~-~~----~~~~---~~~~~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PF----YQKV---PLSLALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-cc----CCCc---eeeccCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1344444332111 00 0010 000001112333333 34899999998654 3455667788899999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 399 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi 399 (696)
++.|+......+.....+ +.... ....+..++.+|.|+++|....+...+ .+.
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~~~~~-----~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--LVKPM-----WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGV 225 (465)
T ss_pred EEEecCchhhhhcccchh--hHHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCC
Confidence 999986432211111111 10000 112355788999999999887652211 011
Q ss_pred ccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHH
Q 005444 400 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 479 (696)
Q Consensus 400 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~ 479 (696)
....++.+||||+|.+.|.|......... .+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~~~------------------~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEMRA------------------RLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHHHH------------------HhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 11568999999999998877543221111 1111 134678999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
+++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 5799999999876 5566666654 3699999 6777899999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc---CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 636 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d---g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~ 636 (696)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999997776 89999999999999988
Q ss_pred HhCCHHHHHHHHHH-HHHH
Q 005444 637 ERYTWKIYSERLMT-LAGV 654 (696)
Q Consensus 637 ~~ysw~~~a~~l~~-ly~~ 654 (696)
++|||+.+++++++ .|+.
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~ 434 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSA 434 (465)
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 78999999999998 6864
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=361.34 Aligned_cols=281 Identities=17% Similarity=0.244 Sum_probs=231.1
Q ss_pred CCCCeEEEEeCCCchHHHHHHhh--cCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~--~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+.+||+||+|++..+..+..++. ..+.|.++|+|+...... .....+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~--------~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR--------EVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc--------hhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 55899999999887777777665 445677889997532210 0001111 01234678999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+...+..++ .|+ ...|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~--~~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGC--PPEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCC--CHHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 876542111 122 267899999999998876532110
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
..++..|+|+||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988778999999999976 6789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~ 601 (696)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|++.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6778899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~-dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++ + ||+.+++|+++|++++.++|||+..++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999997766 7 99999999999999999999999999999999864
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=356.45 Aligned_cols=378 Identities=22% Similarity=0.311 Sum_probs=272.7
Q ss_pred eEEEEEccccccCCcccCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeec
Q 005444 164 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~-tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~ 242 (696)
|||++|+...+ |+ .||.+.++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987655 34 499999999 555566776 7777 66543111 0
Q ss_pred CCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEe
Q 005444 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 243 ~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~ 322 (696)
...++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766542210 111111222222221 1111347999999998887777777778899999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|++......... .....+.+. ...+...++.+|.||++|....+...+. | .+++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLS--SWAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHH--HHHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987532210000 001111111 1235678899999999998865532211 0 1222
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.|......+ ..+|+ ++++++|+|+||+.+.||++.|++++.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765332211 22555 66788999999999999999999999987
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
. ++++|+++|++++ ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4688999998765 11234566777777765 34578765 26778999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH------HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~------e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++++
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 88888886665 89999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHH
Q 005444 636 YERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 636 ~~~ysw~~~a~~l~~ly~~ 654 (696)
.++|||+.+++++.++|+.
T Consensus 368 ~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 368 EEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999863
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=350.04 Aligned_cols=366 Identities=19% Similarity=0.300 Sum_probs=267.2
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 68999973 34599999999 66667799999999 88865322100 01
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc----CCCcEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 319 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~----~gip~v 319 (696)
.+++.+..++.... +......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY--------PLFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc--------chhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332111 001111122222233333333 459999999987654443333322 389999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 399 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi 399 (696)
++.|+........ ...+. ...+..++.+|.|++.|....+...+. |
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~------------------ 161 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F------------------ 161 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c------------------
Confidence 9999753211100 11111 123457889999999998865422111 0
Q ss_pred ccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHH
Q 005444 400 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 479 (696)
Q Consensus 400 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~ 479 (696)
....++.+||||+|...|.+......+ +.++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999998877654332211 12444 56778999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
..+.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 5699999999977 56788889999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhC
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~y 639 (696)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ .||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 899999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 005444 640 TWKIYSERLMTLAGV 654 (696)
Q Consensus 640 sw~~~a~~l~~ly~~ 654 (696)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=347.20 Aligned_cols=374 Identities=16% Similarity=0.202 Sum_probs=274.1
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
|+-||++++.--+|-|. ...||++.++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67899999988887542 34699999999 66666643 899 9988755311 010
Q ss_pred cCCCceEEEEecccCccc-ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 242 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~~~~-~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
...+|+.|.++++....+ ...+|-+- ..+ .|...+...+......++||||+|... .+...+..+..+.|++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 111356777776643221 12233222 222 333344444433324579999999855 34455555666789999
Q ss_pred EecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccc
Q 005444 321 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400 (696)
Q Consensus 321 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~ 400 (696)
+.|.... ...+..++.||++|....+...+ +.
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~~~~---------------------~~- 158 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKFYEE---------------------RL- 158 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHHHHh---------------------hC-
Confidence 9996321 01234678999999876542110 11
Q ss_pred cCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHH
Q 005444 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 480 (696)
Q Consensus 401 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~ 480 (696)
...++.+||||+|.+.|.+......+ +.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 25689999999999888764332111 22454 556789999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC
Q 005444 481 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560 (696)
Q Consensus 481 ~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 560 (696)
++.+..|+++|+|+|++.... ..+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~---~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS---KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc---ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 998888999999999986521 1123345667777887765 5799999 6778899999995 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEE-EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHh
Q 005444 561 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 638 (696)
Q Consensus 561 -E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~-l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ 638 (696)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999997766 88985 78999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 005444 639 YTWKIYSERLMTLAGV 654 (696)
Q Consensus 639 ysw~~~a~~l~~ly~~ 654 (696)
|||+.++++++++|..
T Consensus 362 fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 362 YSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999864
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=340.76 Aligned_cols=365 Identities=16% Similarity=0.196 Sum_probs=261.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++|.++. ..||.+.++. +|++.|.+.|+++. |++....+ ...... . .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~---~-~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI---Q-R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH---H-h
Confidence 677776543 3599999999 55556788899987 77632111 111111 1 1
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE-EEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~-v~t~H 323 (696)
.++.+++++.... . .+ .+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~----------~-~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG----------K-DV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC----------C-Ch----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2467777654321 0 11 122234444444 3999999997544 33445566667774 44555
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ...| .+.+ ..+.....+|.+|++|....+...+. .++..
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~---------------------~~~~~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP---------------------VKVPP 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh---------------------cCCCh
Confidence 43211100 0011 1111 22344567899999998765522111 12225
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.|.......... + ... .+++++|+++||+.+.||++.+++++..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~----------------~-~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP----------------P-DFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH----------------h-hcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 789999999999888765322111000 0 111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 484 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 484 ~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
+..+ +++|+++|+|+. .+.+++.++++++.++|.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788899999999999999942 468888884 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhC
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~y 639 (696)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 005444 640 TWKIYSERLMTLAGV 654 (696)
Q Consensus 640 sw~~~a~~l~~ly~~ 654 (696)
||+.++++|.++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=343.38 Aligned_cols=365 Identities=15% Similarity=0.195 Sum_probs=247.7
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHH---
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE--- 279 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~--- 279 (696)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57788899999999 9987743210 11 57888877553311 123444433322
Q ss_pred ---HHHHHHHH--HhCCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCC----CCccHhhhhhhhhccch
Q 005444 280 ---DVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPD----SDIYWKKFDEKYHFSCQ 349 (696)
Q Consensus 280 ---~~~~~i~~--~~~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~----s~~~~~~~~~~y~~~~~ 349 (696)
.+.+.+.. ..+.+|||||+|...+. +..+.+. .++|+|...|.+....... ........ ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 12222222 12568999999975542 2233333 4588887665322111100 00000000 00010011
Q ss_pred hhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHh
Q 005444 350 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 429 (696)
Q Consensus 350 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~ 429 (696)
.......++.+|.||++|....+..+ ..+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhccc
Confidence 11234578999999999988755211 112468999999999999887643221110
Q ss_pred hhhcchhhhcCCccccccccCCCCCCCCCEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHH
Q 005444 430 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 508 (696)
Q Consensus 430 ~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~ 508 (696)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..|+++|+|+|++.. ......+.
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~-~~g~~~~~ 262 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGV-SYGAPPPD 262 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCc-ccCCCCCC
Confidence 01112 457789999998 9999999999999999988889999999998532 10000000
Q ss_pred -HHHHHHH-HHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcc
Q 005444 509 -IAEIEKM-HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA 586 (696)
Q Consensus 509 -~~~~~~l-~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~ 586 (696)
..+.+.+ +++..+++ .++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0012222 22222222 47899999 7788999999995 999999999999999999999999999999999999
Q ss_pred hhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 587 EIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 587 EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
|++.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++.++|||+.++++|+
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999999997776 8999999999999999988999999999886
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=328.58 Aligned_cols=363 Identities=17% Similarity=0.219 Sum_probs=282.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
++|+++|+|.|| .+||.+.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 479999999994 5799999999 88999999999998 999998776554322
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchH--HHHHHhhcCCCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL--VASLLAYKMGITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l--~a~lla~~~gip~v~t 321 (696)
+.+.+++.+|+.. ..+...+|.+...+.-+...+. +++..|||+|.+.+.+ -+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v--------~~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVV--------GYNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeee--------eecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 2357888888754 2233344443332222222333 3389999999988744 4677889999999999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
-|++..-. ++.-....... .+.+...|.+||+|+...+++ .....++
T Consensus 121 dHSlfGfa----d~~si~~n~ll---------~~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNKLL---------PLSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhccee---------eeeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99974322 22211111111 236789999999998754421 1112333
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
+.|+.+|||.++...|.|...... ..+...|+.++||..+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999543310 2334679999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
+.+++|+++|+|+|+||. ...+++..+++.++++|.++| .++.+++-+.+.. .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 667888999999999999999 8899999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
+||++++|||+||+|||+|++||++|++.++ -......+++++++++.+++.++...|... .+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~-------h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPLEF-------HDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCchhH-------HHHHHHhccH
Confidence 9999999999999999999999999999654 233445579999999999998887776533 3566788999
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
+..+++.+++|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999964
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=340.72 Aligned_cols=386 Identities=20% Similarity=0.259 Sum_probs=262.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999987543 589999999 66667799999999 998642211 010 001111
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHH--HHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~--~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t 321 (696)
++.+...+.....+. ..+ ...+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 122568999999875543322 223334889999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
.|..... . .....+ ....++.. ....+..+++.+|.|+++|....+..++.. ....
T Consensus 122 ~h~~~~~-~-~~~~~~--~~~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQL-L-AQRGSL--LKRLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHH-h-cCCCcH--HHHHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9943211 0 000011 11111110 112466789999999999987654221110 0111
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.+|+||+|.+.|.|......+ +..+. .+++++|+++||+.+.||++.+++++.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664322100 11122 4677899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccccCChhHHHHHHHccccEEEeC
Q 005444 482 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 557 (696)
Q Consensus 482 l~~~~---~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 557 (696)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++..++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98775 79999999998651 12334556788999999 99999999999 6778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 558 S~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999997766 8999999999999999999
Q ss_pred hCCHHHHHHHH
Q 005444 638 RYTWKIYSERL 648 (696)
Q Consensus 638 ~ysw~~~a~~l 648 (696)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=356.96 Aligned_cols=434 Identities=13% Similarity=0.147 Sum_probs=279.9
Q ss_pred HhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCcee-EEEEEccccccCCcccCCCCCCCchhHHHHH
Q 005444 117 VLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILD 195 (696)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~-rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~ 195 (696)
-+|.+|=|.---++--|+.-+-+++..+-+-- +...+... -.+. ||+++.+... .||.+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~rIl~vi~sl~-----------~GGAEr~~~~ 302 (694)
T PRK15179 238 ALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDAGP---ESFVGPVLMINGSLG-----------AGGAERQFVN 302 (694)
T ss_pred HHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccCCC---CCCcceEEEEeCCCC-----------CCcHHHHHHH
Confidence 46777776655566667777777666544211 00000000 1134 7888865443 5999999995
Q ss_pred HHHHHHHHHHHHHHHcCCC----------ccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccc--c
Q 005444 196 QVRALENEMLLRIKRQGLD----------ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILR--Q 263 (696)
Q Consensus 196 ~~raL~~~L~~~L~~~G~e----------V~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~--~ 263 (696)
+|. +|..+|.+ -.+.|++++....+..+ .+...+. ..++.+..++..+..+... .
T Consensus 303 La~--------~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~-~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~ 369 (694)
T PRK15179 303 TAV--------ALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGAD-FFAATLA----DAGIPVSVYSDMQAWGGCEFSS 369 (694)
T ss_pred HHH--------HHHhcccCcccccCccCCCCcEEEEEecccccCcc-hHHHHHH----hCCCeEEEeccCCccCcccccc
Confidence 554 55776441 01223344322111101 1111111 1245666555443211000 0
Q ss_pred ccccCC----Ccc-cHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE-EecCCCccCCCCCCccH
Q 005444 264 WISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYW 337 (696)
Q Consensus 264 wisr~~----i~p-~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~-t~H~l~~~~~~~s~~~~ 337 (696)
+..... ..| ........+.+.+. +.+|||||+|.+.+++++.++++..++|+|+ +.|++...... . .|
T Consensus 370 ~~~~~~~~~~~lp~~~~~~~~~L~~~lk---~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~ 443 (694)
T PRK15179 370 LLAPYREYLRFLPKQIIEGTTKLTDVMR---SSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RY 443 (694)
T ss_pred cchhhHHHhhhcchhHHHHHHHHHHHHH---HcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HH
Confidence 000000 011 11122233444444 3489999999999988889999889999866 56765321110 0 11
Q ss_pred hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCC
Q 005444 338 KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 417 (696)
Q Consensus 338 ~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~ 417 (696)
+ ..+.. ....+....++.+|++|....+...+ ..|+ ...|+.|||||||...
T Consensus 444 ~---~~~~~----l~~~l~~~~~~i~Vs~S~~~~~~l~~-------------------~~g~--~~~kI~VI~NGVd~~~ 495 (694)
T PRK15179 444 R---VEYDI----IYSELLKMRGVALSSNSQFAAHRYAD-------------------WLGV--DERRIPVVYNGLAPLK 495 (694)
T ss_pred H---HHHHH----HHHHHHhcCCeEEEeCcHHHHHHHHH-------------------HcCC--ChhHEEEECCCcCHHh
Confidence 1 11111 11112223445667777654331110 1122 3679999999999887
Q ss_pred CCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCc
Q 005444 418 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY 497 (696)
Q Consensus 418 f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g 497 (696)
|.+.......... +....+++.++|+++||+.+.||++.+++|++++.+..|+++|+|+|+|
T Consensus 496 f~~~~~~~~~~~~------------------~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G 557 (694)
T PRK15179 496 SVQDDACTAMMAQ------------------FDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGG 557 (694)
T ss_pred cCCCchhhHHHHh------------------hccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccC
Confidence 7653322111000 1111134567899999999999999999999999887899999999999
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcE
Q 005444 498 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 577 (696)
Q Consensus 498 ~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 577 (696)
+. .++++++++++++.++|.|+|++. ++..+|+ ++|+||+||.+|+||++++|||+||+||
T Consensus 558 ~~------------~~~L~~l~~~lgL~~~V~flG~~~------dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PV 618 (694)
T PRK15179 558 PL------------LESVREFAQRLGMGERILFTGLSR------RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPV 618 (694)
T ss_pred cc------------hHHHHHHHHHcCCCCcEEEcCCcc------hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeE
Confidence 76 678999999999999999999543 5778888 5999999999999999999999999999
Q ss_pred EEcCCCCcchhhccCCeEEEECCCCH--HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 578 FATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 578 vat~~gG~~EiI~dg~~G~l~~p~d~--e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
|+|+.||+.|+|.++.+|++++++|. ++++++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 619 Vat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 619 VTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred EEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999999999998874 689999988875444444 5678899999899999999999999985
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=334.81 Aligned_cols=281 Identities=19% Similarity=0.288 Sum_probs=230.5
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+||+||+|....+..+..++++.|+|++++.|+.......... .... +.. ....+...++.+|.|+++|+.
T Consensus 80 ~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~~-~~~--~~~~~~~~~~~~d~ii~~s~~ 152 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRSR-WAL--YARRRRRLARRAALFIAVSQF 152 (367)
T ss_pred hhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----cccc-hhH--HHHHHHHHHHhcCEEEECCHH
Confidence 348999999987777788888899999999999975432211110 0000 000 112344578899999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+...+ .|+ ...++.++|||+|.+.|.|...
T Consensus 153 ~~~~~~~--------------------~~~--~~~~i~vi~~g~d~~~~~~~~~-------------------------- 184 (367)
T cd05844 153 IRDRLLA--------------------LGF--PPEKVHVHPIGVDTAKFTPATP-------------------------- 184 (367)
T ss_pred HHHHHHH--------------------cCC--CHHHeEEecCCCCHHhcCCCCC--------------------------
Confidence 6552111 122 2668999999999887755311
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .++++++++++++.++|+
T Consensus 185 ----~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~ 248 (367)
T cd05844 185 ----ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVT 248 (367)
T ss_pred ----CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEE
Confidence 3356789999999999999999999999988788999999998865 567888999999999999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
|+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+
T Consensus 249 ~~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~ 323 (367)
T cd05844 249 FLG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDV 323 (367)
T ss_pred ECC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCH
Confidence 999 6778899999995 999999997 59999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
++++++|.+++ +|++.+++|+.++++++.++|||+.+++++.+
T Consensus 324 ~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 324 AALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999997776 89999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=326.79 Aligned_cols=361 Identities=16% Similarity=0.188 Sum_probs=252.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+||+.+++| |..||++.++. +|+++|.++||+|+ |+|........ . ...
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~------~---~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK------E---TEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc------c---ccc
Confidence 69999999986 45799999999 66667799999999 88866332211 0 112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.+++++++|.....+ ..+.......+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG-----------LGTIIYDILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc-----------hhhhHHHHHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 357888777543111 0000000011111111 133556666544443 33444555669999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
...... .|......+ ....+..+++.+|.|+++|+...+..+.. .+ ..
T Consensus 118 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---------------------~~--~~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKRY----LKFGEKLAVKFADRLIADSPGIKEYLKEK---------------------YG--RD 165 (363)
T ss_pred cceeec-----ccccchhHH----HHHHHHHHHhhccEEEeCCHHHHHHHHHh---------------------cC--CC
Confidence 643221 111111110 11235667899999999998876532111 11 12
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
+ .+||||+|...+.+.... . +.++. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541110 0 11232 234578899999999999999999998754
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC-CC
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 562 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~ 562 (696)
+++|+|+|+++. ...+.+.++ .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677888999999 6778899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999965 7999988775 888886655 899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 005444 643 IYSERLMTLAG 653 (696)
Q Consensus 643 ~~a~~l~~ly~ 653 (696)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=340.09 Aligned_cols=399 Identities=15% Similarity=0.116 Sum_probs=269.8
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccc--
Q 005444 182 GLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG-- 259 (696)
Q Consensus 182 G~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-- 259 (696)
|.-..||.++.+..+|-++.+...+.=+-.|+.|.-+|-++||.+....|..+....-...+.+...+-+++-..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 334569999999988887766655555556888888888999997766554432111111222233444444222111
Q ss_pred ----ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE-EecCCCccCCCCCC
Q 005444 260 ----ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSD 334 (696)
Q Consensus 260 ----~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~-t~H~l~~~~~~~s~ 334 (696)
.++.+++. +.|-.-.-...+...++ ..+|||||+|...+++.+.++++..|+|+++ +.|..... .
T Consensus 249 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~-----~ 318 (578)
T PRK15490 249 IESPELRLLLSH--LPPVCKYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV-----V 318 (578)
T ss_pred ccchHHHHHHhc--CChHHHHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc-----c
Confidence 01111110 00111011112223333 4599999999988888899999999999865 46652110 0
Q ss_pred ccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCc
Q 005444 335 IYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD 414 (696)
Q Consensus 335 ~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD 414 (696)
....+...+..... .......+| +++.|....+...+ .. ++++.|+.|||||+|
T Consensus 319 -~~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~l--gip~~KI~VIyNGVD 372 (578)
T PRK15490 319 -RKRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WL--KLEAKHFQVVYNGVL 372 (578)
T ss_pred -hhhHHHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------Hh--CCCHHHEEEEeCCcc
Confidence 00111111110000 001133344 44555443221110 11 233779999999999
Q ss_pred CCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEE
Q 005444 415 MDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 494 (696)
Q Consensus 415 ~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIv 494 (696)
...|.|.......... . ...++ +++.++|+++||+.+.||...+++++.++.+..|+++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---~------------~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---Q------------FTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---H------------hhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988875432111000 0 01222 35567999999999999999999999988777789999999
Q ss_pred eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC
Q 005444 495 AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 574 (696)
Q Consensus 495 G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G 574 (696)
|+|+. .++++++++++++.++|.|+|++ .++..+|+ ++|+||+||.+|+||++++|||+||
T Consensus 436 GdG~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~La-aADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 436 GDGDL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQ-KMNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred eCchh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHH-hCCEEEEcccccCccHHHHHHHHhC
Confidence 99976 67899999999999999999952 46788888 4999999999999999999999999
Q ss_pred CcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 575 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 575 lPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|||+|+.||..|+|.++.+|+++++.|++++++++..+ .++..+.+....|+++|++++.++|||+.++++|.++|.
T Consensus 497 lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 497 VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998877432 233455556678999999999999999999999999986
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=329.05 Aligned_cols=287 Identities=20% Similarity=0.207 Sum_probs=213.5
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+|||||+|++.+..+. .+.+..++|+|++.|+..... ....| .+ ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~-------~~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVW-------DF------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHH-------HH------HHHHHHhCCEEeecHHH
Confidence 458999999988753332 223334899999999743211 01111 11 12356789998888844
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCC--CCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 321 1121 3455 999999975322 22111110 0112
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
.+|+ ++++++|+++||+++.||++.++++++.+.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cchh---HHHHHHHHHHhCCCCC
Confidence 3565 67889999999999999999999999999877789999999998651 1111 2234455556778889
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 607 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la 607 (696)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..+++.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 36788889998 59999999999999999999999999999999999999999999999987 467888
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++|.+++ .|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 8886665 899999999999999998999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=324.67 Aligned_cols=347 Identities=18% Similarity=0.218 Sum_probs=258.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccc
Q 005444 185 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 264 (696)
Q Consensus 185 ~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~w 264 (696)
+.||.+.++. +|+++|+++||+|. +++...+.. ... ...++.++++++...+.
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccch-----
Confidence 3499999999 66677799999998 887532111 011 11245566666543211
Q ss_pred cccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhh
Q 005444 265 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 344 (696)
Q Consensus 265 isr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y 344 (696)
+..+ .+...+.+.+. ..+||+||+|.....+.+.++++..++|++++.|+...... .
T Consensus 61 ------~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 61 ------LRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred ------hhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 1111 12223333333 34999999999877777888888889999999997633110 0
Q ss_pred hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH
Q 005444 345 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 424 (696)
Q Consensus 345 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 424 (696)
....+..+|.++++|+...+..++ . .+....++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~--~~~~~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------N--YGVDPDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------h--cCCChhhEEEecCCccccccCccccc
Confidence 123467899999999876553221 1 12236799999999999888664322
Q ss_pred HHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCc
Q 005444 425 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 504 (696)
Q Consensus 425 ~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~ 504 (696)
...... .++.++. ++++++|+++||+.+.||++.+++++.++.+..++++|+|+|++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111100 1122333 5677899999999999999999999999988778999999999865
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 505 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 505 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
+....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11234556678888899999999994 4478899994 99999999 8999999999999999999999999
Q ss_pred CcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 584 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 584 G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
|..|++.++.+|++++++|+++++++|..++ ..+++.+.+++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999997554 268999999999999999999999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=315.00 Aligned_cols=372 Identities=19% Similarity=0.239 Sum_probs=262.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|.......... .....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~~~ 53 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLLV------ALNGV 53 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccchh------hccCc
Confidence 6888987665 46799999999 66667789999999 8876532211100 00000
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~ 322 (696)
............ ..+. ...+.+ . ..........+||+||+|.... ...+..+++..++|++++.
T Consensus 54 -~~~~~~~~~~~~----~~~~--~~~~~~------~-~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 54 -PVKLFSINVAYG----LNLA--RYLFPP------S-LLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -eeeecccchhhh----hhhh--hhccCh------h-HHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 0000 000000 1 1111222255899999987433 4556666778899999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+....... ....+.. ....+..+...++.++.++++|.......+. ..+
T Consensus 120 ~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-----------------------~~~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKALKK------RLAWFLFERRLLQAAAAVHATSEQEAAEIRR-----------------------LGL 169 (375)
T ss_pred ccccccccc-ccchhhh------HHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-----------------------hCC
Confidence 986432211 0001111 1111223456788999999998765542110 112
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.+......+ ..++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6689999999999888664432211 11333 56788999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+.+++++|+|+|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22345566678899999999999 6777899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998875 5599999997766 899999999999999999999999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=312.95 Aligned_cols=272 Identities=21% Similarity=0.292 Sum_probs=224.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|+... ..++.+.++..++|++++.|+......... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 445555555668999999996432111000 123456889999999999
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..++..+.. .+. ...++.+||||+|.+.|.+....
T Consensus 140 ~~~~~l~~~-------------------~~~--~~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGC--DPDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCC--CcccEEEEeCCcCHHHcCCcccc------------------------
Confidence 876532211 112 26789999999998877554200
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
...+++.|+++|++.+.||++.+++++.++.+..++++|+|+|+++. .+.+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 03466789999999999999999999999987778999999999877 56788889999999999
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d 602 (696)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
.++++++|.+++ .|++.+.+|++++++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999998776 799999999999999999999999998763
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=310.73 Aligned_cols=333 Identities=15% Similarity=0.166 Sum_probs=239.3
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++|++..+|- +.|..||.++++. +|++.|.++||+|. +++...+.... .
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~------ 52 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----P------ 52 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----c------
Confidence 7999999876642 3467899999999 66666799999999 88865322110 0
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
.......+.. ................+.+.+. ..+||+||+|.+..... +++..++|+|++.|
T Consensus 53 --~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 53 --LVPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred --eeeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0011110100 0000000011112222222222 45899999999887655 56778999999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+...... .+ ........+.++++|....+. . .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 8643211 00 013456778888988776441 0 01 1
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.+. ..++..|+|+||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877551 2346689999999999999999999764
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-CC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 561 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E 561 (696)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444433 568899999 6777899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997654 332 25677888899999
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=310.72 Aligned_cols=354 Identities=19% Similarity=0.241 Sum_probs=257.0
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++..+ |+.||.+.++. +|++.|.++||+|+ |++......... ...
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hhc---
Confidence 6899987665 45799999999 67777799999999 887653322111 111
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.+..+.+++.... ....+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 1335555543211 011111111 111111 2256999999998765333333333368899999996
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
..... .. ....+. ..+...++.+|.|+++|....+.... +..+..
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32111 00 111111 12345789999999999876542110 111146
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.+++++.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999877654322110 0111 456789999999999999999999999885
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCC
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 562 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~ 562 (696)
+++|+|+|+|+. ...+.++++++++.++|.|+| .++..++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 567788888899999999999 7778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhcc-CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~d-g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++++.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999886 89999999999999999997776 89999999999999999999999
Q ss_pred HHHH
Q 005444 642 KIYS 645 (696)
Q Consensus 642 ~~~a 645 (696)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=304.53 Aligned_cols=374 Identities=22% Similarity=0.323 Sum_probs=273.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++...+ ..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 68999876652 3689999999 66667788999999 887764332111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
......... ...........+...+.+.+. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPL----------LRVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCcc----------cccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 000000000 000011111122222223232 34899999999887665557788889999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
......... .. . ........+...++.+|.+++.|....+...+. .+. ...
T Consensus 118 ~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 168 (374)
T cd03801 118 LEFGRPGNE---LG-L----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGV--PPE 168 (374)
T ss_pred chhhccccc---hh-H----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCC--CCC
Confidence 754332111 00 0 000111234567899999999998776532211 111 135
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.++|||+|...+.+.. ...+ . .... ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-R------------------RLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-h------------------hcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1110 0 0111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+|+|++.. ...+.+++++++..++|.|.| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997765 667788888889999999999 6777899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.+.++++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999899999999999999999997766 89999999999999899999999999
Q ss_pred HHHHHHHHH
Q 005444 645 SERLMTLAG 653 (696)
Q Consensus 645 a~~l~~ly~ 653 (696)
++++.++|+
T Consensus 366 ~~~~~~~~~ 374 (374)
T cd03801 366 AARTEEVYY 374 (374)
T ss_pred HHHHHHhhC
Confidence 999998863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=308.71 Aligned_cols=387 Identities=18% Similarity=0.238 Sum_probs=272.7
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++||.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999987663 3488999999 66666789999999 8876543322111000 001122
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~ 322 (696)
.++++.+++...... ..++.+ +.. ...|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~-~~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLN-YLSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHh-hhHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777777644321 000000 011 11222222333321 256899999998432 4556666777799999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+.+............. ...+.+. ...+...++.+|.++++|....+..+ ..+..
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~d~vi~~s~~~~~~~~----------------------~~~~~ 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLL--RKLERLIYRRADAIVVISPGMREYLV----------------------RRGVP 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHH--HHHHHHHHhcCCEEEEECHHHHHHHH----------------------hcCCC
Confidence 98754322111100000 0000111 12355678999999999988765221 01223
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.++|||+|...+.+......+ ..... ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432210 00111 45678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+. ++++|+|+|++.. .+.+.+++...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 4566666666666 5699999 6778899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 563 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 563 f-----GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999997776 8999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 005444 638 RYTWKIYSERLM 649 (696)
Q Consensus 638 ~ysw~~~a~~l~ 649 (696)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=308.58 Aligned_cols=363 Identities=19% Similarity=0.262 Sum_probs=261.0
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++.... |..||.+.++. .|+++|+++||+|. ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987665 34589999999 67777899999999 888664321110 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H 323 (696)
....+...+...... . +.... ....+.+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111110 0 00000 0112222222 34899999886654 46677778889999999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+.......... ........ ........+.+|.+++.|....+... ..+ .
T Consensus 116 ~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYYG--LGPLSWLA-----WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhcc--cchHhHhh-----HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 75431111000 00000000 11234567899999999988654100 111 4
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+++||+|.+.|.|........ +.++ +.++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5889999999998887654332211 1122 345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+. ++++|+|+|+++. .+.++ +..++|.|.| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999876 22232 4567899999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 643 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~ 643 (696)
|++++|||+||+|||+++.|+..|++.++.+|++++++|.++++++|.+++ .|++.+++|++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999997766 89999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 005444 644 YSERLMTLAG 653 (696)
Q Consensus 644 ~a~~l~~ly~ 653 (696)
+++++.++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=333.18 Aligned_cols=293 Identities=18% Similarity=0.236 Sum_probs=232.7
Q ss_pred CCCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCC----CCCCccHhhhhhh-hhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY----PDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~----~~s~~~~~~~~~~-y~~~~~~~~e~~a~~~AD~I 363 (696)
-.++|+||+|... .++++.++++..|+|+|+|.|+...... .........+... .++. ...+..+++.||.|
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEE
Confidence 3578999999754 4678888899999999999998632110 0000000000010 1111 12356788999999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|....+..+ ..|. ...|+.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~--------------------~~g~--~~~ki~vIpNgid~~~f~~~~~~------------------- 287 (475)
T cd03813 249 TTLYEGNRERQI--------------------EDGA--DPEKIRVIPNGIDPERFAPARRA------------------- 287 (475)
T ss_pred EecCHHHHHHHH--------------------HcCC--CHHHeEEeCCCcCHHHcCCcccc-------------------
Confidence 999987643110 1122 36799999999999888764321
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
+ .++++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|++++ +.++.+++++++++++
T Consensus 288 ------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~ 351 (475)
T cd03813 288 ------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLG 351 (475)
T ss_pred ------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhC
Confidence 0 04567899999999999999999999999988889999999999854 1245678899999999
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc------CCeEEE
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFH 597 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d------g~~G~l 597 (696)
+.++|+|+| ..++..+++ .+|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++
T Consensus 352 l~~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 352 LEDNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 999999999 235777888 499999999999999999999999999999999999999988 679999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++.|+++++++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999997766 89999999999999999999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=306.30 Aligned_cols=282 Identities=19% Similarity=0.264 Sum_probs=218.9
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|...+++++.++... .++|++.+.|+..... ... . .........++.++++|.
T Consensus 77 ~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~~------~-----~~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 77 QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RLR------M-----LAYRLTDFLSDLTTNVSK 139 (360)
T ss_pred hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HHH------H-----HHHHHHhhccCceEEEcH
Confidence 349999999988877666665554 3678999999753211 000 0 011223345677777777
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+...+ ..++ ...++.+||||+|...|.+........ ++.
T Consensus 140 ~~~~~~~~-------------------~~~~--~~~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~ 181 (360)
T cd04951 140 EALDYFIA-------------------SKAF--NANKSFVVYNGIDTDRFRKDPARRLKI-----------------RNA 181 (360)
T ss_pred HHHHHHHh-------------------ccCC--CcccEEEEccccchhhcCcchHHHHHH-----------------HHH
Confidence 65442111 1112 257899999999988776654322211 123
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
+++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|
T Consensus 182 ~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v 247 (360)
T cd04951 182 LGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRV 247 (360)
T ss_pred cCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcE
Confidence 454 5678899999999999999999999999988778999999999987 56788888889999999
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|++++++
T Consensus 248 ~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~ 318 (360)
T cd04951 248 KLLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALAN 318 (360)
T ss_pred EEeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHH
Confidence 999943 367888885 99999999999999999999999999999999999999976 899999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|.++++ .+++.++.++.+ ++.+.++|||+.++++|.++|+
T Consensus 319 ~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 319 KIDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9987762 567777777776 8888899999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=303.82 Aligned_cols=358 Identities=16% Similarity=0.182 Sum_probs=251.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++|++.. |..||.+.++. +|+++|.+.||+|. +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998642 34799999999 66667799999998 766543221111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc---hHHH---HHHhhcCCCcE
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NLVA---SLLAYKMGITQ 318 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~---~l~a---~lla~~~gip~ 318 (696)
...... .. .... ....+.+.+. ..+||+||++.+.+ ...+ ....+..++|+
T Consensus 52 ~~~~~~-~~--------------~~~~-----~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI-VL--------------DNPL-----DYRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee-ec--------------CCch-----hHHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 00 0000 0112222333 34899999887432 1222 22234589999
Q ss_pred EEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecc
Q 005444 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 398 (696)
Q Consensus 319 v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~g 398 (696)
|++.|+.... .. .+. ........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~----~~-~~~----------~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLH----EP-RPG----------DRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCcc----cc-chh----------hhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 9999986110 00 000 011234567899999999733222 110
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
...+..++.+||||+|...+.+...... ... ..++++|+++|++.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0111469999999999876655332100 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988788999999999865110 001111145788899999999982 3778899999995 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 005444 559 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 636 (696)
Q Consensus 559 ~~E--~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~ 636 (696)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77777888999999999999999997776 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 005444 637 ERYTWKIYSERLMTLAG 653 (696)
Q Consensus 637 ~~ysw~~~a~~l~~ly~ 653 (696)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 5 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=310.82 Aligned_cols=345 Identities=14% Similarity=0.166 Sum_probs=247.8
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++.. ..||.+.++. +++++|++.||+|+ +++...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 578887643 3599999999 55556688999999 887553221 011011 11
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE-EEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~-v~t~H 323 (696)
.++.+++++.... ....+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK---------------NPLKYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc---------------cHHHHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456665543221 11122223333222 45999999999887667777777777775 56677
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
........... .... ...+....+.+|.++++|....+.... . ...
T Consensus 113 ~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~i~~s~~~~~~~~~------------------~-----~~~ 158 (358)
T cd03812 113 NTSDSHDKKKK----ILKY-------KVLRKLINRLATDYLACSEEAGKWLFG------------------K-----VKN 158 (358)
T ss_pred cccccccccch----hhHH-------HHHHHHHHhcCCEEEEcCHHHHHHHHh------------------C-----CCc
Confidence 65332211110 0000 122445788899999999886552111 0 125
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.+........ ...+. .+++++|+|+||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876653322111 11232 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999876 5678888889999999999994 3468888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+..+.++..+....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGL 346 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccc
Confidence 9999999999999999999999999988 5677777778999999997776 89999998888877655
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=303.93 Aligned_cols=363 Identities=17% Similarity=0.187 Sum_probs=264.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++.+-.. .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765433 389999999 66677789999998 7765422211 11111 1
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H 323 (696)
.++.+..++.... +... .+...+.+.+. +.+||+||++...+...+.+.+.. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~-------------~~~~-~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG-------------RPDP-GALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc-------------cccH-HHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456665554321 0111 12223333333 349999999987776666666665 6889999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
....... .|. ...+ ........+.+|.++++|....+.... .++ ..
T Consensus 113 ~~~~~~~-----~~~--~~~~-----~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~--~~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLV-----ARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGY--PP 158 (365)
T ss_pred CCccccc-----chh--HhHH-----HHHHHHhccccCeEEeccHHHHHHHHH--------------------cCC--Ch
Confidence 8654321 111 1111 112345667889989999876542111 022 25
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.++|||+|...|.+........ ++.+++ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999988776654332211 122555 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
+..++++|+|+|.+.. ......... ++++.++|.|.|. .+++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGE------RSDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEccc------cccHHHHHHh-CCEEEeCCcccc
Confidence 7788999999999876 334444554 7889999999983 2467888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999997776 799999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 005444 643 IYSERLMTLAG 653 (696)
Q Consensus 643 ~~a~~l~~ly~ 653 (696)
..++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=314.66 Aligned_cols=268 Identities=18% Similarity=0.239 Sum_probs=203.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCc--EEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip--~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+.+||+||+|.......+.++++..++| ++.+.|...... . .+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~--------~----~~--------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK--------K----HA--------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc--------c----hh--------hhhhhhcCCEEEEcC
Confidence 3599999999876666667777766655 455555321100 0 00 001236899999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
....+... ..|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 87654211 11333 568999999999654432110
Q ss_pred ccCCCCCCCCCEEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
..+++++|+++||+. +.||++.+++++.++. ++++|+|+|+|++ .+.++++++++++.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~ 235 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIE 235 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCC
Confidence 023567899999996 4699999999998774 3799999999987 67789999999999
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
++|.|+|++.+ +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+ .||+.|+|.++.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999996543 34678888885 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++++|.+++ +|++.+ +.++......+|+-+.+.+++.++|.
T Consensus 313 ~la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998776 788744 12333334477888888888888875
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=302.77 Aligned_cols=369 Identities=19% Similarity=0.301 Sum_probs=263.1
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++...+ |..||...++. .++++|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6888987654 56799999999 67777899999999 8886644321110 00
Q ss_pred CceEEEEecccCcccccccccccCC-CcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~-i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~ 322 (696)
......+.+... ..+.. .+. +...+...+. ..+||+||+|.+.. +..+..++++.++|++.+.
T Consensus 51 ~~~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (374)
T cd03817 51 VVVRPFRVPTFK--------YPDFRLPLP----IPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATY 115 (374)
T ss_pred ccccccccccch--------hhhhhcccc----HHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEe
Confidence 011111111110 01111 111 1111222122 45899999988654 4567778888999999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchh-hhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
|+............ ......... ..+...++.+|.+++.|....+..+ ++ +.
T Consensus 116 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~----~~----------------~~-- 168 (374)
T cd03817 116 HTMYEDYTHYVPLG-----RLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR----EY----------------GV-- 168 (374)
T ss_pred cCCHHHHHHHHhcc-----cchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH----hc----------------CC--
Confidence 98643110000000 000000000 2355678899999999987554211 11 11
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.++|||+|...+.+......+ +.++. ++++++|+++|++.+.||++.+++++.+
T Consensus 169 -~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~ 226 (374)
T cd03817 169 -KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFAR 226 (374)
T ss_pred -CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHH
Confidence 3468999999999887765432221 11333 5567899999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
+.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++||..|
T Consensus 227 ~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e 289 (374)
T cd03817 227 LLKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTE 289 (374)
T ss_pred HHHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEeccccc
Confidence 987778999999999876 567888888999999999999 6778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
++|++++|||+||+|||+|+.|+..|++.++.+|+++++++. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH-
Confidence 999999999999999999999999999999999999998887 8888886665 8999999999999999854 44
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
.++++.++|+
T Consensus 363 --~~~~~~~~~~ 372 (374)
T cd03817 363 --FAKKVEKLYE 372 (374)
T ss_pred --HHHHHHHHHh
Confidence 5666666664
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=312.81 Aligned_cols=392 Identities=14% Similarity=0.077 Sum_probs=255.9
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
.-.||++++.-. +|.+..+. +++++|+++||+|+ |++...+.. .+..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 346788887622 35555667 56777899999999 887653211 0111
Q ss_pred cCCCceEEEEecccC-cccccccccccCCCcccHHHHHHHHHHHHHHH-hCCCCeEEEEeCCCc---hHHHHHHhhcCCC
Q 005444 242 SGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAE-LQGFPDFIIGNYSDG---NLVASLLAYKMGI 316 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~-~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~-~~~~pDvIh~h~~~~---~l~a~lla~~~gi 316 (696)
....++.+++++... ..+. ......+.......+.+.+... ...+||+||+|.+.. ...+.++++..++
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~ 122 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRT 122 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 122367888776653 1110 0001111111111111211111 135899999987554 3456666777899
Q ss_pred cEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceee
Q 005444 317 TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 396 (696)
Q Consensus 317 p~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~ 396 (696)
|+|++.|+.+..... .... .......+. ...+...++.+|.||++|+...+...+
T Consensus 123 ~~V~~~h~~~~~~~~-~~~~--~~~~~~~~~--~~~e~~~~~~ad~ii~vS~~~~~~l~~-------------------- 177 (415)
T cd03816 123 KLIIDWHNYGYTILA-LKLG--ENHPLVRLA--KWYEKLFGRLADYNLCVTKAMKEDLQQ-------------------- 177 (415)
T ss_pred eEEEEcCCchHHHHh-cccC--CCCHHHHHH--HHHHHHHhhcCCEeeecCHHHHHHHHh--------------------
Confidence 999999986421110 0000 000001111 123667889999999999987652211
Q ss_pred cccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc-ccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 397 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 397 ~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~-~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
.| ....|+.|||||. ...|.|........... . ...-+.+. ......+. .+++..+++++||+.+.||++.|
T Consensus 178 ~~--~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~~~~l 250 (415)
T cd03816 178 FN--NWKIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDEDFGIL 250 (415)
T ss_pred hh--ccCCCeeecCCCC-HHHceeCcHHHHHHHHH-h--cccccccccccccccee-cCCCceEEEEeccccCCCCHHHH
Confidence 12 2378999999995 45677754322111000 0 00000000 00000122 13445678889999999999999
Q ss_pred HHHHHHhhc------cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHc
Q 005444 476 VECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 549 (696)
Q Consensus 476 lea~~~l~~------~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~ 549 (696)
++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+|+
T Consensus 251 i~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~- 313 (415)
T cd03816 251 LDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLA- 313 (415)
T ss_pred HHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHH-
Confidence 999999864 247899999999987 678999999999976555556 677899999999
Q ss_pred cccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcC---HHH
Q 005444 550 TKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN---PSH 623 (696)
Q Consensus 550 aadvfV~PS---~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~d---p~~ 623 (696)
++|++|.|+ ..|+||++++|||+||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.
T Consensus 314 ~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 314 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 499999753 35789999999999999999999999999999999999994 8999999997776 77 999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 624 WKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 624 ~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
+++|+++|++.. .++|..-.++.+
T Consensus 388 ~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 388 LNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999886 677876665543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=314.26 Aligned_cols=369 Identities=14% Similarity=0.135 Sum_probs=242.5
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcC-CCccceeEEEeCCCCCCCC-------Cc
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKG-------TT 233 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G-~eV~~~ilV~T~~~~~~~g-------~~ 233 (696)
+-|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+.+..+.... ..
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3589999998766 67899999999 6777889999 7999 99887653211 00
Q ss_pred cccce--e-eecCCCceEEEEecccCcccccccccc--cCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHH-
Q 005444 234 CNQRL--E-RVSGTEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 306 (696)
Q Consensus 234 ~~~~~--e-~i~~~~~v~I~rvp~~~~~~~~~~wis--r~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~- 306 (696)
+.... + .+....+.+|.|+|..+.. +.+.+++ +..++| ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p-~yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIK-FYPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccc-cCcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 11010 0 0100011244455433221 0111010 011111 1234444443 4999999999875 554
Q ss_pred -HHHHhhcCCCcEEEEecCCCccCCCC-CCc-cHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccc
Q 005444 307 -ASLLAYKMGITQCTIAHALEKTKYPD-SDI-YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 383 (696)
Q Consensus 307 -a~lla~~~gip~v~t~H~l~~~~~~~-s~~-~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~ 383 (696)
|..+++++++ +|.+.|+... .|.. ... ....+ ...+... ...-..+|.+++.|....+
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~--l~~~~~~----~~~r~~~d~vi~pS~~~~~----------- 193 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF--LLKYINS----WVVDIYCHKVIRLSAATQD----------- 193 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH--HHHHHHH----HHHHHhcCEEEccCHHHHH-----------
Confidence 6677777766 8889998321 1100 000 00000 0001111 1112348999999975422
Q ss_pred cccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCC--CCEEE
Q 005444 384 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS--KPIVF 461 (696)
Q Consensus 384 ~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~--k~iIl 461 (696)
+ .......++|||.+.|.|....... .+. .++ .+.++
T Consensus 194 --------l----------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l 232 (462)
T PLN02846 194 --------Y----------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAY 232 (462)
T ss_pred --------H----------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEE
Confidence 0 1122234589999988776432110 011 122 35799
Q ss_pred EEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChh
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 541 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 541 (696)
|+|||.+.||++.|+++++++.+..++++|+|+|+|++ .++++++++++++..++ |.| ....+
T Consensus 233 ~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~ 295 (462)
T PLN02846 233 YIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHAD 295 (462)
T ss_pred EEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHH
Confidence 99999999999999999999887778999999999998 77899999999987555 777 33333
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCH
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 621 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp 621 (696)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 ---~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~ 365 (462)
T PLN02846 296 ---PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP 365 (462)
T ss_pred ---HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc
Confidence 3555 58999999999999999999999999999999998 59999999999995 89999999988773 233
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 622 SHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 622 ~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
..++.+++ ++|||+..+++++++|+.
T Consensus 366 ---~~~~~~a~----~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 366 ---APLTDAQR----HELSWEAATERFLRVADL 391 (462)
T ss_pred ---hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence 22333332 599999999999999986
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=305.07 Aligned_cols=342 Identities=17% Similarity=0.218 Sum_probs=245.3
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66667799999999 7764310
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcC--CCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~--gip~v~t 321 (696)
. +.+.+. ..+|||||+|++....+......+. ++|.|++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 011111 3489999999876644443344444 9999999
Q ss_pred ecCCCccCCC----CCCccHh-h-----hhhhhh---ccchhh-h-hHHhhhcCCEEEeccHHHHhhccccccccccccc
Q 005444 322 AHALEKTKYP----DSDIYWK-K-----FDEKYH---FSCQFT-A-DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 386 (696)
Q Consensus 322 ~H~l~~~~~~----~s~~~~~-~-----~~~~y~---~~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~ 386 (696)
+|+....... .....+. . ....+. ...+.. . .......++.++++|....+..++.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986432110 0000000 0 000000 000000 0 1111246778888887654421110
Q ss_pred ccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc
Q 005444 387 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 466 (696)
Q Consensus 387 ~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 466 (696)
..+...++.+||||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225799999999999988775443221 12444 5566778777777
Q ss_pred cc--cCChHHHHHHHHHhhcc-CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCC-hhH
Q 005444 467 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 542 (696)
Q Consensus 467 ~~--~Kgi~~Llea~~~l~~~-~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~-~~e 542 (696)
.. .||++.+++++..+.+. .+++.++++|++.. ... .++.++|.|+| .++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998764 57899999999865 111 14567899999 455 678
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHH
Q 005444 543 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 622 (696)
Q Consensus 543 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~ 622 (696)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8889994 9999999999999999999999999999999999999999999999999999999999998776 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 623 HWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 623 ~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.+|++++++.+.++|||+.++++|.++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999986
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=314.44 Aligned_cols=277 Identities=17% Similarity=0.119 Sum_probs=191.9
Q ss_pred CCCCeEEEEeCCCc---hHHH--H----HHhhcCCCcEEEEecCCCccC----CCCCCccHhhhhhh------h-----h
Q 005444 290 QGFPDFIIGNYSDG---NLVA--S----LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFDEK------Y-----H 345 (696)
Q Consensus 290 ~~~pDvIh~h~~~~---~l~a--~----lla~~~gip~v~t~H~l~~~~----~~~s~~~~~~~~~~------y-----~ 345 (696)
..+|||||.|...+ ++.. . +..+..++|+|.|.|+.+... ++..-..|+.-... | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 56999999998776 3321 1 113456799999999987442 11100111100000 0 0
Q ss_pred -----ccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCC
Q 005444 346 -----FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 420 (696)
Q Consensus 346 -----~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p 420 (696)
|......-....+.++.+|++|...++...+ .++ ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 0000001112234578999999887653111 112 468999999999754332
Q ss_pred CchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc--cccCChHHHHHHHHHhhccCCCeEEEEEeCcc
Q 005444 421 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498 (696)
Q Consensus 421 ~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~ 498 (696)
...... .. .++++++|+++|+. .+.||++.|++|+.++. ++++|+|+|++.
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467889999994 47899999999998763 579999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEE
Q 005444 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 578 (696)
Q Consensus 499 ~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVv 578 (696)
. . ...+|.++|+.. +..++..+|+ ++|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~-~aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALN-QMDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHH-hCCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 3568888898 49999999999999999999999999999
Q ss_pred EcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 579 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 579 at~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~----m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|+.||++|++.++ +|++++|+|++++|+++ +++..++ +..++++++.++|||+.++++|+++|+
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999765 99999999999999854 4444443 335688888899999999999999996
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=313.72 Aligned_cols=395 Identities=17% Similarity=0.214 Sum_probs=259.5
Q ss_pred cCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccc
Q 005444 158 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 237 (696)
Q Consensus 158 ~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~ 237 (696)
+|....++|+++-|+.- ..||.++.+.+-|++| .++|+++. |+|+|...+.. . .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~-~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDAS-P---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCC-H---HHH
Confidence 44444568988876543 3479999999666665 67798654 45888663221 1 111
Q ss_pred eeeecCCCceE------EEEecccCcccccccccccCCCcccHHHHH---HHHHHHHHHHhCCCCeEEEEeCCCchHHHH
Q 005444 238 LERVSGTEHTH------ILRVPFRSEKGILRQWISRFDVWPYLETFT---EDVGSEITAELQGFPDFIIGNYSDGNLVAS 308 (696)
Q Consensus 238 ~e~i~~~~~v~------I~rvp~~~~~~~~~~wisr~~i~p~l~~f~---~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~ 308 (696)
+.....+-++. ++++. .++|++ ...||++.-+. ..+...+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------cccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 11111111222 22221 124664 34555532222 2222222222233666554222222 112
Q ss_pred HHhhcCCCcEEEEecCCCccC------------CCC----CCccH-hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 309 LLAYKMGITQCTIAHALEKTK------------YPD----SDIYW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 309 lla~~~gip~v~t~H~l~~~~------------~~~----s~~~~-~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
.+++..++|++..+|-..... +.. ....+ ......|+.... ..+..+.+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHH
Confidence 233455899999999432110 000 00001 011111111111 135567799999999999876
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
+..++.+ +. +.++.+|+||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 5432221 11 3478899999997655221100
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhc----cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~----~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
.++++++++++||+.+.||++.+++|++++.+ ..++++|+|+|++.. .++.++.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02346789999999999999999999998754 246899999999854 1223456789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcc-hhhcc---CCeEEEECCCCH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHP 603 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~-EiI~d---g~~G~l~~p~d~ 603 (696)
|.|+| .++.+++..+|+. ++++|+||..|+||++++|||+||+|||+++.||+. |++.+ +.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 6778899999995 999999999999999999999999999999999985 77765 67899985 89
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.++.
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999988762 26888999999999998 779999999999998763
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=294.02 Aligned_cols=356 Identities=18% Similarity=0.246 Sum_probs=258.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57788764 378899998 66677789999999 8876533221 0111
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhh-cCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~-~~gip~v~t~H 323 (696)
.++.+..+|..... .+ .+..+ .....+.+.+. ..+||+||+|...+..++.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~-~~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDL-KALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHH-HHHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24666666654310 11 11111 11122233333 45999999998777777777776 45566788888
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ..... ..+ ...++..++.+|.+++.|....+...+. ...+ ..
T Consensus 113 ~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTS-GGLKR----RLY-----LLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhcc-chhHH----HHH-----HHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 75432211 11011 111 1234567888999999998876522111 1111 13
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+++||+|.+.+.+.... .+++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998766543210 0456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~-li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
+..++++|+|+|++... ..... ++.+.+..++|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 77789999999998761 11111 3667778889999994 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999997765 899999999999999999999999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999876
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=302.08 Aligned_cols=364 Identities=20% Similarity=0.238 Sum_probs=256.8
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 578888766531 5799999999 66667799999998 776553322111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.... ... ......+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLR---------LPRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---ccc---------cccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 000 0001111111111111122222 35899999998776444 6679999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
+.....+...... .... ........++.+|.++++|....+...+. . +....
T Consensus 113 ~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~--~~~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRY-----FRRLLRRALRRADAIITVSEATKRDLLRY-------------------L--GVPPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHH-----HHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------h--CcCHH
Confidence 7554433221111 0000 11234567899999999998766532111 1 11256
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.++|||+|...+.+..... +.. ... .+++++|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998776654322 100 111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|+++.||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 112223336778899999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||+..
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 4799999999999999997765 89999999999999665 88999999
Q ss_pred HHHHH
Q 005444 645 SERLM 649 (696)
Q Consensus 645 a~~l~ 649 (696)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=308.00 Aligned_cols=366 Identities=18% Similarity=0.228 Sum_probs=243.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHc--CCCccceeEEEeCCCCCCCCCcc---ccceeeecCCCceEEEEec-ccCccc
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTC---NQRLERVSGTEHTHILRVP-FRSEKG 259 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~--G~eV~~~ilV~T~~~~~~~g~~~---~~~~e~i~~~~~v~I~rvp-~~~~~~ 259 (696)
.||.++.+.+.|++| .++ ||+|+ |+|........... .... .+.-..++.++++. .+
T Consensus 13 ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~~~~~~~~~~~~~~~~~---- 75 (419)
T cd03806 13 GGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-NIELDRPRIVFFLLKYR---- 75 (419)
T ss_pred CCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-CeecCCCceEEEEecce----
Confidence 469999999777765 445 78888 99988544220000 0011 01111234545443 11
Q ss_pred ccccccccCCCcccH---HHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEecCCCccCCCCCC
Q 005444 260 ILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIAHALEKTKYPDSD 334 (696)
Q Consensus 260 ~~~~wisr~~i~p~l---~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~H~l~~~~~~~s~ 334 (696)
.|+++ ..|+.+ -.+...+...+......+||||+.+...+ ..++.++ .++|++..+| ++.--.+..
T Consensus 76 ---~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~---~~~~~i~y~h--~P~~~~d~l 146 (419)
T cd03806 76 ---KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLL---GGCPVGAYVH--YPTISTDML 146 (419)
T ss_pred ---eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHh---cCCeEEEEec--CCcchHHHH
Confidence 12322 233332 23333333333333345899998876443 2222222 3789999999 221000000
Q ss_pred --c----------------cH-hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccccccccccccccee
Q 005444 335 --I----------------YW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 395 (696)
Q Consensus 335 --~----------------~~-~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~ 395 (696)
. .. ......|+ ......+.+.++.||.|+++|....+..++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~-~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~----------------- 208 (419)
T cd03806 147 QKVRSREASYNNSATIARSPVLSKAKLLYY-RLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW----------------- 208 (419)
T ss_pred HHHhhccccccCccchhccchHHHHHHHHH-HHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh-----------------
Confidence 0 00 00000010 00112567789999999999988765322211
Q ss_pred ecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 396 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 396 ~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
+ ...++.||+||+|.+.|.+.... ...++++|+|+||+.+.||++.+
T Consensus 209 ----~-~~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~vgr~~~~K~~~~l 255 (419)
T cd03806 209 ----K-RNTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILSIAQFRPEKNHPLQ 255 (419)
T ss_pred ----C-cCCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEEEEeecCCCCHHHH
Confidence 1 02488999999998776543210 03456799999999999999999
Q ss_pred HHHHHHhhccCC-----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc
Q 005444 476 VECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 550 (696)
Q Consensus 476 lea~~~l~~~~~-----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a 550 (696)
++|+.++.+..+ +++|+|+|++.. .++.++.+.++++++++++.++|.|+| .++.+++..+|+.
T Consensus 256 i~A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~- 324 (419)
T cd03806 256 LRAFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST- 324 (419)
T ss_pred HHHHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-
Confidence 999999987554 499999999764 122345778999999999999999999 7888999999995
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc-chhhc---cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHH-HHH
Q 005444 551 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHPDQAAELMADFFGKCKENPS-HWK 625 (696)
Q Consensus 551 advfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~-~EiI~---dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~-~~~ 625 (696)
+|++|+||..|+||++++|||+||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++ ++++ .++
T Consensus 325 adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~ 398 (419)
T cd03806 325 ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERL 398 (419)
T ss_pred CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHH
Confidence 99999999999999999999999999999999886 57777 799999985 9999999998877 5554 455
Q ss_pred HHHHHHHHHHHHhCCHHHHHH
Q 005444 626 KISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 626 ~m~~~a~~~v~~~ysw~~~a~ 646 (696)
.+ .++++.+.++|||+.+.+
T Consensus 399 ~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 399 RI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HH-HHHHHHHHHhhCHHHhcc
Confidence 55 555556779999998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=292.67 Aligned_cols=345 Identities=16% Similarity=0.223 Sum_probs=251.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++..+ .||.+.++. +|+++|+++||+|. +++..... .. .. ...
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~--~~----~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGE--PP----FY---ELD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCC--CC----cc---ccC
Confidence 68888876542 589999999 66667788999999 88766433 00 00 011
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCC-CcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~g-ip~v~t~H 323 (696)
.++.+..++...... +.. .+ .+...+.+.+. ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~~---~~----~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LLA---RF----KKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hhc---cc----cchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 234555554432110 000 00 11112223232 35999999998772 2222233344 48999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ...+ ...+...++.+|.+++.|...... ......
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~------------------------~~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRAL------------------------YYKKFN 155 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHHH------------------------hhccCC
Confidence 75321100 0000 002456789999999999876310 011225
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998755432 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|++.+ ...+.++++++++.++|.|.|. .+++..+++. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8789999999999877 5667778899999999999993 4678899995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 564 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++.+ ++|||+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677777777999999999999999998776 89999999999996655 899999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++|.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=290.64 Aligned_cols=362 Identities=23% Similarity=0.325 Sum_probs=264.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccccc
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 265 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wi 265 (696)
.||...++. .+++.|.++||+|+ +++................ . .......... .+.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~-----~~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLLKGRL--V-----GVERLPVLLP-----VVP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhccccc--c-----cccccccCcc-----hhh
Confidence 589999999 66777789999999 8876643321110000000 0 0000000000 000
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhh
Q 005444 266 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 344 (696)
Q Consensus 266 sr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y 344 (696)
... .......+...+.+.+.. ...+||+||+|+... ...+..+++..++|++.+.|+..........
T Consensus 69 ~~~-~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LLK-GPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred ccc-cchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 000 111112233333333331 156999999997654 5667777888899999999986543322111
Q ss_pred hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH
Q 005444 345 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 424 (696)
Q Consensus 345 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 424 (696)
.........++.+|.+++.|....+..++. + .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchH
Confidence 011223457889999999998876522110 1 236789999999999888765432
Q ss_pred HHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCc
Q 005444 425 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 504 (696)
Q Consensus 425 ~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~ 504 (696)
.. . ..+. ..+++.|+++|++.+.||++.+++++..+.+..++++|+|+|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0122 4567899999999999999999999999987778999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC
Q 005444 505 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 505 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG 584 (696)
.+.+.+.++++++.++|.+.| .++.+++..+++. ||++++|+..|++|++++|||+||+|||+++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 566778888889999999999 7778999999995 9999999999999999999999999999999999
Q ss_pred cchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 585 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 585 ~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
..+++.++.+|++++++|+++++++|.+++ .+++. +++.++++.+.++|||+..++++.++|+
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998776 78776 7888999999999999999999999875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=292.95 Aligned_cols=354 Identities=16% Similarity=0.188 Sum_probs=245.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++..| ..+||.+.++. .|+++|+++||+|. +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999876654 24699999999 56666789999999 887653322111000
Q ss_pred CceEEEEecc--cCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEE
Q 005444 245 EHTHILRVPF--RSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTI 321 (696)
Q Consensus 245 ~~v~I~rvp~--~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t 321 (696)
.+..+...+. .........+......+ ...+...+.+.+. ..+||+||+|.+.. .......++..++|++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPRDLFHLSDYD--NPAVVAEFARLLE---DFRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCchhhhhHHHhcc--CHHHHHHHHHHHH---HcCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 0111111110 00000000000000000 0111222223332 34899999998754 334445567788999999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
.|+.+.... +. .......|.++++|....+..++. +..
T Consensus 127 ~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~- 164 (359)
T cd03823 127 LHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF- 164 (359)
T ss_pred Eeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC-
Confidence 997532110 00 011223399999998765422110 111
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.+||||+|...+.+... + .+.++++|+++|++.+.||++.+++++.+
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~--~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------A--PPGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------C--CCCCceEEEEEecCccccCHHHHHHHHHH
Confidence 468999999999887654321 0 14567889999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-C
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-Y 560 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 560 (696)
+.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||. .
T Consensus 216 l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~ 273 (359)
T cd03823 216 LPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWP 273 (359)
T ss_pred HHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCccc
Confidence 876 7899999999876 11111111 5667899999 6778999999995 999999997 7
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 561 E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++...
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~---- 345 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS---- 345 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh----
Confidence 999999999999999999999999999999999999999999999999997776 799999999999987763
Q ss_pred HHHHHHHHHHHHH
Q 005444 641 WKIYSERLMTLAG 653 (696)
Q Consensus 641 w~~~a~~l~~ly~ 653 (696)
++.++++++++|+
T Consensus 346 ~~~~~~~~~~~~~ 358 (359)
T cd03823 346 IEDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHHhh
Confidence 3899999999875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=309.24 Aligned_cols=282 Identities=14% Similarity=0.141 Sum_probs=205.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHh-hcCCCcEEEEecCCCccCCCC---C-CccHhhhhhhhhcc--chhhhhHHhhhcCCE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPD---S-DIYWKKFDEKYHFS--CQFTADLIAMNNADF 362 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla-~~~gip~v~t~H~l~~~~~~~---s-~~~~~~~~~~y~~~--~~~~~e~~a~~~AD~ 362 (696)
..++|+||++.+..+. .+. +..++|.|++.|+.+...+.. . ....+ ..|+.. .....|+..++.+|.
T Consensus 102 ~~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~ad~ 175 (397)
T TIGR03087 102 AEPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR---WIYRREGRLLLAYERAIAARFDA 175 (397)
T ss_pred hCCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCcchh---HHHHHHHHHHHHHHHHHHhhCCe
Confidence 4589999998754322 222 346899999999864322110 0 00000 011110 011246778899999
Q ss_pred EEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCc
Q 005444 363 IITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 442 (696)
Q Consensus 363 IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~ 442 (696)
|+++|+.+.+..++. . .....++.+||||+|.+.|.|.....
T Consensus 176 vi~~S~~~~~~l~~~-------------------~--~~~~~~v~vipngvd~~~f~~~~~~~----------------- 217 (397)
T TIGR03087 176 ATFVSRAEAELFRRL-------------------A--PEAAGRITAFPNGVDADFFSPDRDYP----------------- 217 (397)
T ss_pred EEEcCHHHHHHHHHh-------------------C--CCCCCCeEEeecccchhhcCCCcccc-----------------
Confidence 999999876532211 0 11246899999999998886643210
Q ss_pred cccccccCCCCCCCCCEEEEEccccccCChHHHH----HHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 443 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 443 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll----ea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
... .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +.+
T Consensus 218 ------~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~--- 273 (397)
T TIGR03087 218 ------NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV--- 273 (397)
T ss_pred ------CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH---
Confidence 001 34567999999999999999988 56666766678999999999865 122
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
++++..++|+|+|+ ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++
T Consensus 274 -~~l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~l 344 (397)
T TIGR03087 274 -RALAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELL 344 (397)
T ss_pred -HHhccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceE
Confidence 33344567999994 33 57888885 999999997 69999999999999999999997643 33444568999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++ +|+++++++|.+++ +|++.+++|+++|++++.++|||+..++++.++++
T Consensus 345 v~-~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 345 VA-ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred eC-CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 86 89999999997766 89999999999999999999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=286.62 Aligned_cols=351 Identities=18% Similarity=0.220 Sum_probs=249.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++... .||...++. .|+++|.++||+|. +++............. ..
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~~------~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLPS------NV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCcccccccc------ch
Confidence 5788876543 489999999 66667789999999 8776533221110000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCC-CchHHHHHHhhcCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~-~~~l~a~lla~~~gip~v~t~H 323 (696)
........... .... ..+...+.+.+. ..+||+||++.. ...+++.+..+. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRD----LLAILRLRRLLR---KEKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccc----hhHHHHHHHHHH---hcCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 0001 112222333333 238999999988 555555555444 899999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+............+ ......++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 87543321111000 224567889999999998765421111 111 25
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765433211 0122 467789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|++.. .+.+.+.++++++.++|.|.|.. +++..+++. +|++|+||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 56677889999999999999942 357788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996444433 46678999999999989988888886
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=308.33 Aligned_cols=279 Identities=19% Similarity=0.241 Sum_probs=211.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCC--CccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s--~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
..++||+|++.+.....+ ++.....+|.+.++|+......... ...|. ..|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999876653333 4456668999999997432221111 11122 11211 112467789999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+...+.+.+..++| ....+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~------------------~~~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY------------------YNIEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh------------------cCCCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11256899999998755433210
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
..++..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2334679999999999999999999999988889999999999976 5789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECC----CC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDP----YH 602 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p----~d 602 (696)
|.|+|. .+ +..+++ .+|+||+||.+|+||++++||||||+|||+|+++ |++|+|.+|.+|+++++ .|
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999993 33 455666 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 603 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 603 ----~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++++|++|.+++ . ++.+++|+++|++.+ ++|||+.++++|.++++
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 777888886654 4 557899999999976 88999999999999875
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=296.78 Aligned_cols=276 Identities=15% Similarity=0.239 Sum_probs=219.1
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCc-EEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip-~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
..++|++|+++... +..+.++.++.+.+ +|.++|+..... ......+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999866554 44555667777766 899999753211 00011111 11234578999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
....+..++. ++....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~---------------------~~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR---------------------YPAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH---------------------CCCccccEEEEECCcccccccCCC-------------------------
Confidence 9876633222 122266899999999986554320
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC--CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~--~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
..++++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++++..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999987765 567788999876 56788888888888
Q ss_pred CcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCC-CH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 603 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~-d~ 603 (696)
++|.|+| .++.+++..+++. .+|+||.||.+||||++++|||+||+|||+|++||..|++.++.+|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 6778899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
++++++|.+++ +||+.+++|+++|++++.++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999997776 7999999999999999999999999988874
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=294.74 Aligned_cols=438 Identities=17% Similarity=0.185 Sum_probs=295.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee--
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 241 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i-- 241 (696)
|||+.+|...+|- -++||....+. .|.++|++.|++|. |+.+.++.-. ..+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~-~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQ-KEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhh-hhhccccceeeE
Confidence 7899999888763 57999999998 56666799999999 8888877322 2222211111
Q ss_pred ----c-CCCceEEEEecccCc-cc--cc--ccccccC--CCccc---HHHHHH--HHHHHHHHHhC--CCCeEEEEeCCC
Q 005444 242 ----S-GTEHTHILRVPFRSE-KG--IL--RQWISRF--DVWPY---LETFTE--DVGSEITAELQ--GFPDFIIGNYSD 302 (696)
Q Consensus 242 ----~-~~~~v~I~rvp~~~~-~~--~~--~~wisr~--~i~p~---l~~f~~--~~~~~i~~~~~--~~pDvIh~h~~~ 302 (696)
. +.....+........ -+ ++ ....+|. ..+.+ ..+|+. .+.-.+..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0 001011111111000 00 11 1112231 12222 123322 22222222222 479999999999
Q ss_pred chHHHHHHhh----cCCCcEEEEecCCCccCCCC-CCccHhhhhh-hhh-----ccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 303 GNLVASLLAY----KMGITQCTIAHALEKTKYPD-SDIYWKKFDE-KYH-----FSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 303 ~~l~a~lla~----~~gip~v~t~H~l~~~~~~~-s~~~~~~~~~-~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
.++++.+++. ...+|.|+|+|++..+.... ....+-.+.. .|. +..+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 9999999998 44799999999986544322 1111111111 111 11222345667889999999999987
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
.+... ..| +..+.++.+ ....++.-|-||+|.+.+.|.++......--.+-.+.+..++....+++|+
T Consensus 221 ~Ei~t--~~~----g~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYT--PEY----GEGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhcc--ccc----cccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 65431 111 122222221 123688999999999999998765322111111222345566677788998
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
..+.+.|++.++|||..+||++.+++++..+.+.. ++|+|.|.|.. ...+.+..+++++.. ++...
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEEE
Confidence 66778899999999999999999999999998754 99999999933 456778888888754 44433
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--------CCeEEEECCCCH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYHP 603 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--------g~~G~l~~p~d~ 603 (696)
- .. ++.+.+.+...+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||+|.+.|+
T Consensus 355 i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 2 22 3455555555799999999999999999999999999999999999999976 579999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
++++.+|..++.-....+..|+.+..++.. ..|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999886555556669999999886 6899999999999999863
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=282.16 Aligned_cols=250 Identities=13% Similarity=0.071 Sum_probs=184.2
Q ss_pred CCCCeEEEEeCCCc---hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~~~~---~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||+||+|.+.. .+.+.++++..++|++++.|+++.......... ......+. ...++..++.+|.||++
T Consensus 98 ~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~---~~~~~~~~--~~~e~~~~~~ad~ii~~ 172 (371)
T PLN02275 98 IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGR---SHPLVRLY--RWYERHYGKMADGHLCV 172 (371)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCC---CCHHHHHH--HHHHHHHHhhCCEEEEC
Confidence 46999999987554 456677788889999999998742111000000 00001111 12366788999999999
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND 446 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 446 (696)
|+...+...+. .|+ ++.+||||+ .+.|.|......
T Consensus 173 S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~-------------------- 207 (371)
T PLN02275 173 TKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR-------------------- 207 (371)
T ss_pred CHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc--------------------
Confidence 99876522110 122 278999995 456655432100
Q ss_pred cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh-----------------ccCCCeEEEEEeCccCCCCCcchHHH
Q 005444 447 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVAGYIDVNKSKDREEI 509 (696)
Q Consensus 447 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~-----------------~~~~~~~LvIvG~g~~~~~~~d~e~~ 509 (696)
+ ..+...+++++||+.+.||++.+++|+..+. +..|+++|+|+|+|+.
T Consensus 208 --~---~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~---------- 272 (371)
T PLN02275 208 --L---RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ---------- 272 (371)
T ss_pred --c---cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC----------
Confidence 0 0223457889999999999999999998873 2357899999999987
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCCCCcc
Q 005444 510 AEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPA 586 (696)
Q Consensus 510 ~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMa~GlPVvat~~gG~~ 586 (696)
.++++++++++++.+ |.|.+. .++.+++..+|+. +|+||.|+ ..|+||++++||||||+|||+|+.||..
T Consensus 273 --~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 273 --KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred --HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 678999999999987 887651 4678899999995 99999863 2489999999999999999999999999
Q ss_pred hhhccCCeEEEECCCCHHHHHHHHHHH
Q 005444 587 EIIEHGASGFHIDPYHPDQAAELMADF 613 (696)
Q Consensus 587 EiI~dg~~G~l~~p~d~e~la~~I~~~ 613 (696)
|+|+++.+|++++ |+++++++|.++
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 9999999999997 699999998654
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=281.50 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=191.2
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCC------CCccHhhhhhhhhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPD------SDIYWKKFDEKYHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~------s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 363 (696)
..++|+||++.... +..+....++|.+..+|+.....+.. ....+......+.+......+..+++++|.|
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999875432 22222556788888888632211110 0000000000011111112355678999999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|...++..++ .+..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~------------------------~~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKK------------------------YYGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHH------------------------HhCCCcEEECCCCCHhhcCcCC---------------------
Confidence 9999987653211 1134567999999987665421
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998763 78999999876 333333 4
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
..++|.|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568899999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
++++++|.+++ +|++ .+.++.++.+ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999997776 6774 2334445555 679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=278.85 Aligned_cols=273 Identities=20% Similarity=0.262 Sum_probs=212.5
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCC-CccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.++|+||++....... .++......+.+.++|+......... ...|+. .+.. ....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 6899999988765433 33444455677888997533221110 011111 1111 11236789999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.++...+.. + ...++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~---------------------~-~~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF---------------------G-NYNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh---------------------C-CCCceEEEcccccChhhcccch--------------------------
Confidence 765332211 1 0234889999999877655320
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
...++..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 03455689999999999999999999999988889999999999876 456777888999999999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECCCCHHHHHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
|.|+. .++.++++. +|++|.||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99942 357888885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
+|..++ .|++.+++|++++++.+ ++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 997776 89999999999999995 899999998864
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=270.68 Aligned_cols=258 Identities=12% Similarity=0.111 Sum_probs=189.4
Q ss_pred EeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHh-hhcCCEEEeccHHHHhhccc
Q 005444 298 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 376 (696)
Q Consensus 298 ~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 376 (696)
.|+....+..+-...+.|+|+++++|+... +.. ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------l~~--------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------ISH--------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------hhH--------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 444444455555556678999999997211 000 112334 57899999999987653211
Q ss_pred ccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCC
Q 005444 377 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 456 (696)
Q Consensus 377 ~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~ 456 (696)
.|++. +.++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999999887654210 123
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+.++++.|++.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4577788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECC----------------
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 600 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p---------------- 600 (696)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhhhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 601 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 601 ---~d~e~la~~I~~~l~~l~~d--p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 27788888887766 44 24455555555555679999999999999999754
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=276.46 Aligned_cols=274 Identities=11% Similarity=0.104 Sum_probs=196.4
Q ss_pred CCCCeEEEEeCCCc-hHH--HHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhh-hcCCEEEe
Q 005444 290 QGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM-NNADFIIT 365 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~--a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~-~~AD~IIt 365 (696)
...|||||.+.+.. ++. |..++++++ |+|.++|+............+ +.. +.... ...+.. .++|.|++
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L~~---~llk~-l~~~v~r~hcD~VIa 504 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--LQA---FFVKH-INNWVTRAYCHKVLR 504 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--HHH---HHHHH-HHHHHHHhhCCEEEc
Confidence 45999999998875 666 888999999 899999985432111000000 000 00000 001111 12899999
Q ss_pred ccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 366 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 366 ~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+|..... + . ...+..| ||||++.|.|......+ .
T Consensus 505 PS~atq~-------------------L-------~--~~vI~nV-nGVDte~F~P~~r~~~~-r---------------- 538 (794)
T PLN02501 505 LSAATQD-------------------L-------P--KSVICNV-HGVNPKFLKIGEKVAEE-R---------------- 538 (794)
T ss_pred CCHHHHH-------------------h-------c--ccceeec-ccccccccCCcchhHHH-H----------------
Confidence 9965432 0 0 1122222 69999999886553322 1
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
.+|. +...+.++|+|||.+.||++.|++|++.+....++++|+|+|+|+. .+.+++++.++++
T Consensus 539 --~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL- 601 (794)
T PLN02501 539 --ELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL- 601 (794)
T ss_pred --hcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC-
Confidence 1343 2233458999999999999999999999887778999999999988 6788899998887
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
+|.|+|... +...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+.+ +|+++
T Consensus 602 -~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 489999433 2345677 599999999999999999999999999999999985 456678888865 68999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++|.+++ .|+..+..+.+ ...|||+.+++++++...+
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 999998877 56654433321 2489999999999998764
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=268.91 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=207.8
Q ss_pred CCCCeEEEEeCCCchHHHHHHh-hcCCCcEEEEecCCCccCCCCC---Ccc-------HhhhhhhhhccchhhhhHHhhh
Q 005444 290 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIY-------WKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla-~~~gip~v~t~H~l~~~~~~~s---~~~-------~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
..++||+|+|.|..+..+..++ +..++|.|+|.|+....++... +++ +...........+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999998888888 5688999999999877664211 122 1111112223334456888999
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhh
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~ 438 (696)
.||.++|+|+....+.+... +.++.+ |||||+|.+.|.+..+..+.....++.|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll---------------------~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL---------------------KRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh---------------------CCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998876543321 222344 9999999999877654332222222222221
Q ss_pred cCCccccccccCCCCCCCCCEEEE-Eccccc-cCChHHHHHHHHHhhcc----CCC---eEEEEEeCccCCCCCcchHH-
Q 005444 439 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDREE- 508 (696)
Q Consensus 439 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgi~~Llea~~~l~~~----~~~---~~LvIvG~g~~~~~~~d~e~- 508 (696)
. ....+.++++ ++++++++| +||+.. +||++.+++|++++... ..+ +-|+|+-++.. +...|.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 0112344665 677778777 799998 99999999999998641 222 23444433311 000000
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 005444 509 --IAEI-------------------------------------------------------------------EKMHELM 519 (696)
Q Consensus 509 --~~~~-------------------------------------------------------------------~~l~~li 519 (696)
++.. +.+-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111122
Q ss_pred HHcCCC----Cc--EEEecc---ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc----c
Q 005444 520 KTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 586 (696)
Q Consensus 520 ~~~~L~----~~--V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~----~ 586 (696)
++.+|. ++ |.|... .+|.+-..+.+.+++ +||+||+||.+|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222332 22 344331 223344456777788 599999999999999999999999999999999999 5
Q ss_pred hhhccC-CeEEEECC-------CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 005444 587 EIIEHG-ASGFHIDP-------YHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 587 EiI~dg-~~G~l~~p-------~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~-~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|++.++ ..|+.+.+ .+.++++++|.++ ... +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~----~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF----CQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHH----hCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666554 36777763 3344445555444 333 56776766655 3344899999999999998763
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=250.80 Aligned_cols=344 Identities=13% Similarity=0.095 Sum_probs=234.6
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||+|++.. +||.+.... +|++.|.++||+|. ++|...... ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~~-----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGME-----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCchh-----hhcccc---
Confidence 898888642 368887777 67777899999999 887642110 001111
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
.++.+.+++.....+. ...++.............+.+.+. +.+||+||+|.+.+++.+.++++..++|+|++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2567777776432110 000000000000111112222222 3489999999987777788888889999998766
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+... . ...++.++.+|.+++++++... ....
T Consensus 123 ~~~~--------~--------------~~~r~~~~~~d~ii~~~~~~~~---------------------------~~~~ 153 (357)
T PRK00726 123 NAVP--------G--------------LANKLLARFAKKVATAFPGAFP---------------------------EFFK 153 (357)
T ss_pred CCCc--------c--------------HHHHHHHHHhchheECchhhhh---------------------------ccCC
Confidence 4311 0 1134567789999998874311 0126
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHH-HHHHHh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGKN 482 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll-ea~~~l 482 (696)
.++.+|+||+|.+.+.+.... ++++. +++.++|+++|+....|++..++ +|+.++
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred CCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 799999999998765542211 11333 45677889999988888876555 898888
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+. + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++ ++|++|.+|-
T Consensus 210 ~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g--- 261 (357)
T PRK00726 210 PEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG--- 261 (357)
T ss_pred hhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC---
Confidence 643 3 56778888854 33444445 6664 9999953 46888888 4999998762
Q ss_pred CcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEEECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
+.+++|||+||+|+|++..++ ..+.+.+.++|++++++| +++++++|.+++ +|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHHH
Confidence 689999999999999997653 236677788999999888 999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 886 88999999999988754
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-26 Score=241.61 Aligned_cols=224 Identities=13% Similarity=0.148 Sum_probs=166.2
Q ss_pred hhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcch
Q 005444 356 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435 (696)
Q Consensus 356 a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~ 435 (696)
.|.+.+.+|++|...++..++ .|++ . .+ +|+||+|.+.|.|.........
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 455677889999876653221 1332 2 23 4789999999887542211111
Q ss_pred hhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHH
Q 005444 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 511 (696)
Q Consensus 436 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~ 511 (696)
+.++.. .++.++|+++||++++||++.|++|+.++.+..++ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 112221 24667899999999999999999999999876654 578888732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 512 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 512 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567899999994 99999999999999999999999999999999999887531
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 592 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 592 ------------------g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
...||.+++.|+++++++|..+++. .|++. .+.++++++ ++|+|+.++++|+
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2358899999999999999887631 34433 366777776 8999999999886
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=256.68 Aligned_cols=312 Identities=13% Similarity=0.077 Sum_probs=213.1
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
..|+|+.|+....+++.++.++ ...|+++..|... |.+.. |..+.. ...-...+..+|.|...+...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~lp~-------~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCLPW-------REELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhCCC-------hHHHHHHHhcCCEEEECCHHH
Confidence 6799999999887777777654 3588999999653 22221 211110 011123566799999988765
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
....-+........ ..+. .......| ...++.++|||||.+.|.+.......... +. +..+
T Consensus 199 ~~~Fl~~~~~~l~~-~~~~-~~~i~~~g---~~~~i~vip~GID~~~f~~~~~~~~~~~~----~~----------~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGL-EVTD-DGGVEYGG---RRVRVGAFPIGIDPDAFRKLAASPEVQER----AA----------ELRE 259 (460)
T ss_pred HHHHHHHHHHHcCC-cccC-CceEEECC---EEEEEEEEeCeEcHHHHHHHhcCchhHHH----HH----------HHHH
Confidence 43221111000000 0000 00000111 13478999999999988764321110000 00 0122
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 525 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 525 (696)
. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++.. ....+..++.+.+.+++.+.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 45788999999999999999999999998777675 67999986532 11223344556677776664431
Q ss_pred -----CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhccCCeEE
Q 005444 526 -----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 596 (696)
Q Consensus 526 -----~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~dg~~G~ 596 (696)
..|++++ ..++.+++..+|+ ++|+||+||..|+||++++|||+||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355543 1678899999999 599999999999999999999999999 999999988877 46899
Q ss_pred EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 597 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 597 l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+++|.|++++|++|.+++. .+++.++.+++++++++ ++|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 9999999999999988772 35678889999999998 78999999999875
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=240.20 Aligned_cols=324 Identities=13% Similarity=0.109 Sum_probs=222.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccc
Q 005444 185 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 264 (696)
Q Consensus 185 ~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~w 264 (696)
.+||...++. .|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC-----
Confidence 3588888888 67777899999999 888753211 0011 11246777777643211
Q ss_pred cccCCCcccHH------HHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHh
Q 005444 265 ISRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 338 (696)
Q Consensus 265 isr~~i~p~l~------~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~ 338 (696)
...+..+. .....+.+.+. +.+||+||+|.+..++.+.++++..++|+++..|+...
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 11111111 11112233333 34899999998777777788888899998876554211
Q ss_pred hhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCC
Q 005444 339 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 418 (696)
Q Consensus 339 ~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f 418 (696)
. ..+++.+..+|.|+++|+...+. ..+.++.+|+||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~~---------------------------~~~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAKY---------------------------FPKDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhhc---------------------------CCCCcEEEECCCCchHHh
Confidence 0 01234566799999999876430 125689999999998766
Q ss_pred CCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEE-EEEeC
Q 005444 419 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAG 496 (696)
Q Consensus 419 ~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~L-vIvG~ 496 (696)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54321 122454 567788888887777777754 4588888763 45664 46677
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc
Q 005444 497 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 576 (696)
Q Consensus 497 g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 576 (696)
+ + .+++.+.++++ .++|.|.|++ .++..+|+. +|++|.+|- +++++|||++|+|
T Consensus 221 g-~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~P 274 (350)
T cd03785 221 G-D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLP 274 (350)
T ss_pred c-c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCC
Confidence 6 4 45666777665 4689999943 468888884 999998762 6899999999999
Q ss_pred EEEcCCCC--------cchhhccCCeEEEECCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 577 TFATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 577 Vvat~~gG--------~~EiI~dg~~G~l~~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
+|+++.++ ..+.+.++++|++++++ |+++++++|.+++ .|++.+++|++++++++ +.+.-+++++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 99987654 35677778899999987 8999999997776 79999999999999887 5666666553
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-25 Score=236.99 Aligned_cols=315 Identities=15% Similarity=0.139 Sum_probs=208.1
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccH---HHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 279 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l---~~f~~ 279 (696)
.|+++|.++||+|+ ++|+..... . .. ....++.+.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--~----~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--K----RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--h----cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67778899999999 888632110 0 00 011256777777643211 0000111111 11122
Q ss_pred HHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhc
Q 005444 280 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 359 (696)
Q Consensus 280 ~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 359 (696)
.+.+.+. +.+||+||+|.+..+..+.++++..++|+|+..|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------~--------------~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP--------G--------------LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------c--------------HHHHHHHHH
Confidence 2333333 45899999998777777777888889998754332100 0 013456778
Q ss_pred CCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhc
Q 005444 360 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 439 (696)
Q Consensus 360 AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l 439 (696)
+|.+++.|+...+. -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 99999999875430 133689999997655432110
Q ss_pred CCccccccccCCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 440 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 440 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
+.+++ ++++++|+++|+....|++.. +++++..+.+. +.++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 11444 567788999998888888755 55888887652 466655554433 3567777
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC-------cchhhcc
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 591 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG-------~~EiI~d 591 (696)
++++++.+.+.|.. . ++..+|+ ++|++|.+| + |++++|||++|+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555542 1 5677888 599999875 2 789999999999999997754 2467888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 592 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 592 g~~G~l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
+.+|++++++| +++++++|.+++ +||+.+++|++++++++ +.+.-+.+++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 99999999886 999999997766 89999999999998876 4555554443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=243.54 Aligned_cols=312 Identities=16% Similarity=0.158 Sum_probs=212.5
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|.+|+....+++.++.++. ..++.+..|.. +|.++++.. + .....-...|-.||.|...|+..
T Consensus 127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~~-l-------p~r~~il~gll~~dligF~t~~~ 194 (456)
T TIGR02400 127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYRT-L-------PWRRELLEGLLAYDLVGFQTYDD 194 (456)
T ss_pred CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHhh-C-------CcHHHHHHHHhcCCEEEECCHHH
Confidence 45899999999888888887764 45788889953 333332211 1 11111234788999999999988
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
+..........-.. -..++ .+..+ ....++.++|||||++.|.+........... .. .++.+
T Consensus 195 ~~~Fl~~~~~~l~~--~~~~~--~~~~~--g~~~~v~viP~GID~~~f~~~~~~~~~~~~~-~~----------lr~~~- 256 (456)
T TIGR02400 195 ARNFLSAVSRELGL--ETLPN--GVESG--GRTVRVGAFPIGIDVDRFAEQAKKPSVQKRI-AE----------LRESL- 256 (456)
T ss_pred HHHHHHHHHHHhCC--cccCC--ceEEC--CcEEEEEEecCcCCHHHHHHHhcChhHHHHH-HH----------HHHHc-
Confidence 76543322211000 00000 00001 1134788999999999987643221100000 00 01111
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-C
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-D 525 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~ 525 (696)
+++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ....+.....+.+++++.+.+. .
T Consensus 257 ----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~~~i~~lv~~in~~~ 329 (456)
T TIGR02400 257 ----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLRRQVEELVGRINGRF 329 (456)
T ss_pred ----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHHHHHHHHHHHHHhcc
Confidence 3677999999999999999999999998776665 56888864321 1112222333444444433221 1
Q ss_pred Cc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhccCCeEE
Q 005444 526 GQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 596 (696)
Q Consensus 526 ~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~dg~~G~ 596 (696)
+. |.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+.+|..+.+. +|+
T Consensus 330 ~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gl 402 (456)
T TIGR02400 330 GTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GAL 402 (456)
T ss_pred CCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcE
Confidence 11 44444 2677899999999 599999999999999999999999999 99999999888883 799
Q ss_pred EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 597 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 597 l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
+++|.|++++|++|.++++ .+++.++++.++.++++ .+||+...++++++-
T Consensus 403 lVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 403 LVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 9999999999999988773 47788999999999998 679999999998763
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=232.33 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=191.7
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.+||+||++..+........+++.++|++++-|.+... +...|..+. ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~~---------~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKFK---------RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHHH---------HHHHHHHHhCCEEEECCHHH
Confidence 39999998855532223334577899988876543211 111111111 12345788999999999987
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
++...+ .|++ +. +.+++|+ +.+.+.+....... .. .++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc
Confidence 652111 1222 44 7788884 33333222111110 00 111232
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+.. +.|
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~~-~~~ 292 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLSY-VRR 292 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCcE-EEc
Confidence 356788888864 6889999999999887789999999999876 1257888899988863 555
Q ss_pred ecccccc--------CChhHHHHHHHccccEE-EeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccC-CeEEEEC
Q 005444 531 IAAQTNR--------ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHID 599 (696)
Q Consensus 531 lG~~~~~--------v~~~el~~~la~aadvf-V~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg-~~G~l~~ 599 (696)
.|..... ...+++..+|+ .+|++ +.||..|++|.+++|||+||+|||++.. ++..|+++.. .+|++++
T Consensus 293 ~~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~ 371 (425)
T PRK05749 293 SQGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ 371 (425)
T ss_pred cCCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE
Confidence 4421100 02468999999 49995 4578889999999999999999999864 6677776553 4688888
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|+++++++|.+++ +||+.+++|+++|++++.++ ...++++.+++.
T Consensus 372 ~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 372 VEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred ECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 999999999997766 89999999999999998655 255566666554
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=222.80 Aligned_cols=264 Identities=11% Similarity=0.059 Sum_probs=181.0
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++++..++.....+...++|++++.++.... ..+..+.+|.++++|+.
T Consensus 102 ~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~ 157 (380)
T PRK13609 102 AEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDH 157 (380)
T ss_pred HhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHH
Confidence 349999999877665544444556779988666543210 01246689999999987
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+... ..|+ ...|+.++++.++.. |.+...... .++.+
T Consensus 158 ~~~~l~--------------------~~gi--~~~ki~v~G~p~~~~-f~~~~~~~~------------------~~~~~ 196 (380)
T PRK13609 158 VKKVLV--------------------DIGV--PPEQVVETGIPIRSS-FELKINPDI------------------IYNKY 196 (380)
T ss_pred HHHHHH--------------------HcCC--ChhHEEEECcccChH-HcCcCCHHH------------------HHHHc
Confidence 654211 1133 366888876655432 222111111 12335
Q ss_pred CCCCCCCCC-EEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~-iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|
T Consensus 197 ~l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v 258 (380)
T PRK13609 197 QL--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DAL 258 (380)
T ss_pred CC--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcE
Confidence 65 45555 455678888899999999987542 6789988865432 12456777776654 689
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCc----chhhccCCeEEEECCCCH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~----~EiI~dg~~G~l~~p~d~ 603 (696)
+|+|++. ++..+++ ++|++|. ++.|++++|||+||+|+|+++ .+|. .+++.+ +|+.+...|+
T Consensus 259 ~~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~ 325 (380)
T PRK13609 259 KVFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDD 325 (380)
T ss_pred EEEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCH
Confidence 9999543 4678888 5999985 567999999999999999985 5653 234433 3444555799
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++++|.+++ .||+.+++|++++++.. +.++++.+++.+++++..
T Consensus 326 ~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 326 EEVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 99999997766 89999999999998765 678999999999988653
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-24 Score=205.41 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=143.8
Q ss_pred CCCCCEEEEEccccccCChHHHHHHHHHhhcc-CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~-~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+..+++.+++.++|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999763 68999999996544 677889999999999999999
Q ss_pred cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHH
Q 005444 533 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 612 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~ 612 (696)
.++..++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5667899999995 99999999999999999999999999999999999999999999999999999999999977
Q ss_pred HHHhhhcCHHHHHHHHHHHHHH
Q 005444 613 FFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 613 ~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
++ .+++.++.|+++++++
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 76 8999999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=238.52 Aligned_cols=309 Identities=13% Similarity=0.148 Sum_probs=210.8
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++..+.++ ...++.+..|... |.+.++.. ......-...|-.||.|-+.|+..
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPF----Ps~e~fr~--------lp~r~~il~gll~aDligF~t~~y 214 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF----PSSEIYKT--------LPSRSELLRAVLTADLIGFHTYDF 214 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCC----CCHHHHhh--------CCCHHHHHHHHhcCCEEEeCCHHH
Confidence 3489999999988888888776 4578889999653 33332211 111111234688999999999877
Q ss_pred Hhhcccccccccccccccccccceeeccccc--CCCcEEEecCCCcCCCCCCCchHH---HHHhhhhcchhhhcCCcccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDV--FDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~--~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~~~~~l~~~~~~ 445 (696)
+...-+...... ++.. ...++.. ...++.++|||||.+.|.+..... .+...+
T Consensus 215 ~r~Fl~~~~r~l-----~~~~---~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l-------------- 272 (797)
T PLN03063 215 ARHFLSACTRIL-----GVEG---THEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKEL-------------- 272 (797)
T ss_pred HHHHHHHHHHHh-----Cccc---cCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHH--------------
Confidence 654322111000 0000 0011111 134788999999998886543211 111110
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCe----EEEEEeCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~----~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
++. ..++++|+++|||++.||+..+++||+++.+.+|++ .|+.+++... ....+ .+.+++.+++
T Consensus 273 r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~~----y~~l~~~v~~ 340 (797)
T PLN03063 273 KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVPE----YQKLKSQVHE 340 (797)
T ss_pred HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchHH----HHHHHHHHHH
Confidence 011 235789999999999999999999999988777765 3554443211 11122 3344444444
Q ss_pred cC--CC---CcEEEec--cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhc
Q 005444 522 YK--LD---GQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 590 (696)
Q Consensus 522 ~~--L~---~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~ 590 (696)
+. +. +.+.|.+ +....++.+++..+|+ +||+||+||..||||++++|||+||+| +|+|..+|.++.+
T Consensus 341 l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l- 418 (797)
T PLN03063 341 LVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL- 418 (797)
T ss_pred HHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-
Confidence 32 22 2233333 1113678899999999 599999999999999999999999999 9999999999976
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+.+|++++|.|++++|++|.+++. .+++.+++..+..++++ .++||...++.+++-+.
T Consensus 419 -~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 419 -GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELN 476 (797)
T ss_pred -cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHH
Confidence 557999999999999999988873 48888999899999998 89999999999888664
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-21 Score=213.35 Aligned_cols=266 Identities=12% Similarity=0.079 Sum_probs=176.4
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+.+|+.++.+....++. ...+.++|+.+++..... +... ... ...+...++.||.|+|+|..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~---~~~~~~~Vyd~~D~~~~~-~~~~---~~~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAA---LLQASLVVYDCVDDLSAF-PGGP---PEL---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHHHh---hcCCCeEEEEcccchhcc-CCCC---HHH---------HHHHHHHHHhCCEEEECCHH
Confidence 5566666666555433333 356788999988753321 1111 000 03466789999999999987
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+..+ .. ..++.+||||+|.+.|.+......... .
T Consensus 164 l~~~~~----------------------~~---~~~i~~i~ngvd~~~f~~~~~~~~~~~-----------------~-- 199 (373)
T cd04950 164 LYEAKR----------------------RL---NPNVVLVPNGVDYEHFAAARDPPPPPA-----------------D-- 199 (373)
T ss_pred HHHHHh----------------------hC---CCCEEEcccccCHHHhhcccccCCChh-----------------H--
Confidence 654211 11 368999999999998876432210000 0
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
+...++++|+|+|++++.++++.+.++.. ..|+++|+|+|++... ..... +...++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~~----~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPSA----LLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChhH----hccCCCEE
Confidence 01356789999999999888776655443 3478999999998320 01111 11246799
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.+.. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 7788999999995 9999999863 4689999999999999999986544 444443444 456999
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++++|.+++. .+...... .+.+ +.+.|||+..++++++...
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999988652 22222111 2222 4588999999999986543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=221.12 Aligned_cols=347 Identities=13% Similarity=0.122 Sum_probs=238.8
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc--------------CCCcEEEEecCCCccC---CCCC----------
Q 005444 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTK---YPDS---------- 333 (696)
Q Consensus 281 ~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~--------------~gip~v~t~H~l~~~~---~~~s---------- 333 (696)
..+.+ +.+..+||+||+|.|+++++...+.+. .+.+.++|.|++.... ++..
T Consensus 151 ~l~~l-~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~ 229 (601)
T TIGR02094 151 GVRAL-RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYA 229 (601)
T ss_pred HHHHH-HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhh
Confidence 33333 334679999999999998877664221 1366899999976544 2211
Q ss_pred ---CccHhhhhhhh-h---ccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcE
Q 005444 334 ---DIYWKKFDEKY-H---FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKF 406 (696)
Q Consensus 334 ---~~~~~~~~~~y-~---~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~ 406 (696)
.+.+..+.... . +..++..-..++..||.|.++|+...+-++..++.+ + ..++....++
T Consensus 230 ~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~i 295 (601)
T TIGR02094 230 ANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVPI 295 (601)
T ss_pred hHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCCc
Confidence 11111110000 0 001234456789999999999988765332221111 0 0111113458
Q ss_pred EEecCCCcCCCCCCCchHHHHHhhhhcc---------------------h-hhhcCCcccccc-----------------
Q 005444 407 NIVSPGADMDIYFPYSEKQKRLTALHGS---------------------I-EQLLFDPEQNDE----------------- 447 (696)
Q Consensus 407 ~VIpnGvD~~~f~p~~~~~~r~~~~~~~---------------------~-~~~l~~~~~~~~----------------- 447 (696)
.-|.||||...|.|.....-..+...+. + +.+..++..+.+
T Consensus 296 ~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~ 375 (601)
T TIGR02094 296 GYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADA 375 (601)
T ss_pred cceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcc
Confidence 8899999999998754322110000000 0 111111111111
Q ss_pred ----ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 ----HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ----~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
.+|...+++.+++++++|+..+||.+.+++++.++.+.- .+++||+.|.+.. .|..-++.++.+..++
T Consensus 376 ~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la 451 (601)
T TIGR02094 376 AILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFS 451 (601)
T ss_pred hhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHH
Confidence 355556889999999999999999999999988886421 3599999999865 3455566788888888
Q ss_pred HHcCCCCcEEEeccccccCChhHHHHHHHccccEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 520 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 520 ~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
++...+++|.|+- . -+..+.+.+-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.
T Consensus 452 ~~~~~~~kv~f~~----~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~ 525 (601)
T TIGR02094 452 KRPEFRGRIVFLE----N-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWA 525 (601)
T ss_pred hcccCCCCEEEEc----C-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEE
Confidence 8766778999985 2 245667766668999999 999 999999999999999999999999998887 6789999
Q ss_pred ECC------------CCHHHHHHHHHHHH-HhhhcC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 598 IDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 598 ~~p------------~d~e~la~~I~~~l-~~l~~d-----p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
|.+ .|.+++.++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 526 f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 526 IGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 984 79999999998766 333344 66799999999987767899999999999986
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=230.81 Aligned_cols=310 Identities=15% Similarity=0.118 Sum_probs=208.6
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|..|+.+..+++..+.++. ..++.+..|...+ .+.+... + .....-...|-.+|.|-..+...
T Consensus 133 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~-l-------p~~~~ll~~ll~~Dligf~t~~~ 200 (726)
T PRK14501 133 PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL-L-------PWREEILEGLLGADLIGFHTYDY 200 (726)
T ss_pred CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh-C-------CChHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999988888887653 5678888996533 2222221 1 11112234688999999988876
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHH---HHHhhhhcchhhhcCCcccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
.....+........ .+-.+ .....|- ..++.++|||||.+.|.+..... .+...+ ++
T Consensus 201 ~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l--------------r~ 260 (726)
T PRK14501 201 VRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL--------------RQ 260 (726)
T ss_pred HHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH--------------HH
Confidence 54322221110000 00000 0011111 23688999999999987643211 111100 00
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
. .+++++|+++||+++.||+..+++||+++.+.+|+ ++|+++|.+.. ..-.+..+..+.+.+++.+.+
T Consensus 261 ---~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~~~~~~~v~~in 332 (726)
T PRK14501 261 ---D--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMKREIDELVGRIN 332 (726)
T ss_pred ---H--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHHHHHHHHHHHHH
Confidence 0 24677999999999999999999999998777675 78999985422 000222344455555555433
Q ss_pred C-------CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHc-----CCcEEEcCCCCcchhhcc
Q 005444 524 L-------DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 524 L-------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~-----GlPVvat~~gG~~EiI~d 591 (696)
. .+.+.+.| .++.+++..+|+ +||+||+||..||||++++|||+| |.||+++..|+..+++
T Consensus 333 ~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-- 405 (726)
T PRK14501 333 GEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-- 405 (726)
T ss_pred hhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC--
Confidence 1 12234555 678899999999 599999999999999999999999 5567777778888875
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
.|++++|.|++++|++|.+++. .+++.+....+++++++ .+|||..+++++++.|..
T Consensus 406 --~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 406 --EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred --cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 4899999999999999988772 23445555557788887 799999999999988764
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-21 Score=208.54 Aligned_cols=264 Identities=14% Similarity=0.132 Sum_probs=182.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhh-----cCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAY-----KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~-----~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 363 (696)
+.+||+||++++.. ...+.++++ ..++|+++++.++.... ..+..+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 35999999976543 222222322 34789888776642100 01245689999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|+...+... ..|++ .+|+.++++++|.+.+.+......
T Consensus 155 ~~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~----------------- 195 (382)
T PLN02605 155 FCPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE----------------- 195 (382)
T ss_pred EECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH-----------------
Confidence 999987654211 12333 779999999998765443322211
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc----cCCCeE-EEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~----~~~~~~-LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|.+.. ..+.+.+.
T Consensus 196 -~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~ 261 (382)
T PLN02605 196 -LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR 261 (382)
T ss_pred -HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh
Confidence 1234777 6788999999999999999999999876431 135565 556665422 12333332
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC------CCcchhhccC
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHG 592 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~------gG~~EiI~dg 592 (696)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++
T Consensus 262 ----~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~ 325 (382)
T PLN02605 262 ----DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDN 325 (382)
T ss_pred ----cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhC
Confidence 2245799999543 5888888 599999865 48999999999999999983 444 444556
Q ss_pred CeEEEECCCCHHHHHHHHHHHHHhhhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 593 ASGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 593 ~~G~l~~p~d~e~la~~I~~~l~~l~~d-p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++.
T Consensus 326 g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 326 GFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred Cceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 677765 69999999998776 66 999999999999887 7788898988887764
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=188.61 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=103.5
Q ss_pred EEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChh
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 541 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 541 (696)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++| .++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 99999999999999999999988778999999999877 334444467778889999999 44334
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEE
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
+....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444435999999999999999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-19 Score=187.59 Aligned_cols=290 Identities=23% Similarity=0.315 Sum_probs=210.2
Q ss_pred CeEEEEeCCCchH---HHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 293 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 293 pDvIh~h~~~~~l---~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+|+++.+...... .........+.+.+...|....................+.+. ..........+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999977765433 455566667788888888765433221111111010100000 0011112247778888766
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.....+. -....++.++||+++...+.+.. .
T Consensus 161 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA-----------------------LGVPNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH-----------------------hCCCCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 00123788999999988776540 1
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
++..+.....++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111112247899999999999999999999999887667999999999761 245666888888888999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 609 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~ 609 (696)
|+| .++..++..+++. +|++++||.+|+||++++|||++|+|||+|+.++..+++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5556788888884 89999999999999999999999999999999999999988878998877789999999
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 610 I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+..++ ++++.++.+++.+++.+.+.|+|+..++++.+++..
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 98776 777888899887777777899999999999988764
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=198.75 Aligned_cols=263 Identities=13% Similarity=0.150 Sum_probs=177.8
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++.+.+++.....++..++|+++...+.... ..+..+.+|.+++.|+.
T Consensus 102 ~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------------------------~~w~~~~~d~~~v~s~~ 157 (391)
T PRK13608 102 KEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------------------------KNWITPYSTRYYVATKE 157 (391)
T ss_pred HhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------------------------cccccCCCCEEEECCHH
Confidence 349999999766554333333445689986554432100 01234689999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+... ..|++ ..++.++.++++.....+.. ... .++.+
T Consensus 158 ~~~~l~--------------------~~gi~--~~ki~v~GiPv~~~f~~~~~-~~~------------------~~~~~ 196 (391)
T PRK13608 158 TKQDFI--------------------DVGID--PSTVKVTGIPIDNKFETPID-QKQ------------------WLIDN 196 (391)
T ss_pred HHHHHH--------------------HcCCC--HHHEEEECeecChHhccccc-HHH------------------HHHHc
Confidence 654211 12443 67888888877754322221 111 11235
Q ss_pred CCCCCCCCCE-EEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~i-Il~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. +.. .++.+.++..++|
T Consensus 197 ~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~----------~l~---~~l~~~~~~~~~v 258 (391)
T PRK13608 197 NL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK----------ELK---RSLTAKFKSNENV 258 (391)
T ss_pred CC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH----------HHH---HHHHHHhccCCCe
Confidence 65 455554 5678999989999999998632 336788877765432 112 2233334455689
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCC----cchhhccCCeEEEECCCCH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG----~~EiI~dg~~G~l~~p~d~ 603 (696)
.++|++ +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ...++.+.+.|+.. .|+
T Consensus 259 ~~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~ 325 (391)
T PRK13608 259 LILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTP 325 (391)
T ss_pred EEEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCH
Confidence 999954 35888888 5999997 457999999999999999995 444 22344455667654 589
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++++++|.+++ +|++.+++|++++++.. +.|+|+.+++.+++++.
T Consensus 326 ~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 326 EEAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 99999997766 89999999999999886 67999999999998754
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-18 Score=174.21 Aligned_cols=394 Identities=16% Similarity=0.217 Sum_probs=252.7
Q ss_pred cCCCc-eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCC---c
Q 005444 158 GRLPM-VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---T 233 (696)
Q Consensus 158 ~~~p~-~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~---~ 233 (696)
++.+. ...|+++-|.+.- .||-+++.---+|++.+. .-..+++|+|..+.-.... .
T Consensus 37 ~~~~k~~ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k----------~~n~~~viYsGD~n~t~~~IL~k 96 (465)
T KOG1387|consen 37 NRAEKNVKTVGFFHPYCNA----------GGGGERVLWKAVRITQRK----------FPNNVIVIYSGDFNVTPENILNK 96 (465)
T ss_pred hhhhhhceEEEEecccccC----------CCCcceehhHHHHHHHHh----------CCCceEEEEeCCCCCCHHHHHHH
Confidence 34343 3567788766652 366677666566665221 1122355777664321110 0
Q ss_pred cccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHH---HHHHhCCCCeEEEEeCCCchHHHHHH
Q 005444 234 CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE---ITAELQGFPDFIIGNYSDGNLVASLL 310 (696)
Q Consensus 234 ~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~---i~~~~~~~pDvIh~h~~~~~l~a~ll 310 (696)
.....+..-+.+++..+.+..|. |++ ..-|+...-..+.+... +.+..+..|||-+-....+ +.-.+.
T Consensus 97 ~k~~F~idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~ 167 (465)
T KOG1387|consen 97 VKNKFDIDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIF 167 (465)
T ss_pred HHHhcCceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHH
Confidence 01122222334566666665543 232 33454433222333332 2333477999988443322 222233
Q ss_pred hhcCCCcEEEEecCCCcc--------CCCCC-CccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccc
Q 005444 311 AYKMGITQCTIAHALEKT--------KYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQY 381 (696)
Q Consensus 311 a~~~gip~v~t~H~l~~~--------~~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy 381 (696)
++..++|++..+|-.--. +.+.+ -+.|..+.-+-.|++. -..+=..||.+++.|.......+..|+
T Consensus 168 r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G~~ad~vm~NssWT~nHI~qiW~-- 242 (465)
T KOG1387|consen 168 RRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAGSKADIVMTNSSWTNNHIKQIWQ-- 242 (465)
T ss_pred HHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhccccceEEEecchhhHHHHHHHhh--
Confidence 446789999999942110 01111 1222222111112211 123456899999999887655444432
Q ss_pred cccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEE
Q 005444 382 ESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVF 461 (696)
Q Consensus 382 ~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl 461 (696)
..+..+|+|..+.+..... .+. ...+.+.++
T Consensus 243 ---------------------~~~~~iVyPPC~~e~lks~---------------------------~~t-e~~r~~~ll 273 (465)
T KOG1387|consen 243 ---------------------SNTCSIVYPPCSTEDLKSK---------------------------FGT-EGERENQLL 273 (465)
T ss_pred ---------------------ccceeEEcCCCCHHHHHHH---------------------------hcc-cCCcceEEE
Confidence 3467788887776521110 111 145678899
Q ss_pred EEccccccCChHHHHHHHHHhhcc------CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~------~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
++|.+.+.||.. +++.++-...+ .+.++|+|||+-.. .++.+..+.|+.++++++++++|.|.-
T Consensus 274 ~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~--- 343 (465)
T KOG1387|consen 274 SLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK--- 343 (465)
T ss_pred EEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe---
Confidence 999999999999 55544433222 25689999999866 456677889999999999999999987
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc-chhhcc---CCeEEEECCCCHHHHHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIEH---GASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~-~EiI~d---g~~G~l~~p~d~e~la~~I~ 611 (696)
.+|.+++..++.. |.+.|+.-+.|-||+.++|+||+|+-+|+.+.||+ -||+.+ ..+||+.+ +.++.|++|.
T Consensus 344 -N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iL 419 (465)
T KOG1387|consen 344 -NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAIL 419 (465)
T ss_pred -cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHH
Confidence 7899999999995 99999999999999999999999999999999887 466643 36899984 6788999998
Q ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 612 DFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 612 ~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
++.. .|++.+..|..+||..+ .+|+-....+.+.+.+
T Consensus 420 kIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 420 KIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred HHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 8874 78888999999999887 8899888877777553
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-18 Score=188.61 Aligned_cols=314 Identities=11% Similarity=0.070 Sum_probs=215.1
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++..+.++. ..++-+..|.. +|.+++... + .....-...|-.||.|=.-|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-------P~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-------PWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-------CchHHHHHHHhcCCeEEeCCHHH
Confidence 44899999999888888887653 46778888864 333322111 1 11112234677899999988877
Q ss_pred Hhhccccccccccccc-cc---cccc---------ceeecccccCC--CcEEEecCCCcCCCCCCCchHH---HHHhhhh
Q 005444 371 IAGTKNTVGQYESHTA-FT---LPGL---------YRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEKQ---KRLTALH 432 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~-~~---~p~l---------~~~~~gi~~~~--~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~ 432 (696)
+...-+.....-.... .. .+.. -....++.... -++.++|.|||.+.|.+..... .+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 6544332221100000 00 0000 00000111112 2578899999999886542211 11111
Q ss_pred cchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHH
Q 005444 433 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 508 (696)
Q Consensus 433 ~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~ 508 (696)
.++.+| ++++|++++||+..||+...++||+++.+.+|+ +.|++||.... +..++.
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 578999999999999999999999999877775 79999987643 223445
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cE
Q 005444 509 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 577 (696)
Q Consensus 509 ~~~~~~l~~li~~~-------~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 577 (696)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ +|||++.||+.||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 55667777777765 4445466666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 578 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 578 vat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
|.|..+|.++.+ ..+++++|.|++++|++|.+++. ..++.+++--+..++++ .++|....++.+++-
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999999998766 35899999999999999998873 45556666666667776 788888888877754
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=187.06 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=177.9
Q ss_pred CCCCeEEEEeCC-CchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~-~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|.. ...+.++++++.+|+|++++-+++ .+..... .|.. .. ......+.+|.++++|+
T Consensus 84 ~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~--~~--------~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 84 EEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPE--EI--------NRQLTGHIADLHFAPTE 150 (365)
T ss_pred HcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCcc--HH--------HHHHHHHHHHhccCCCH
Confidence 348999999964 446778899999999987654443 1100000 0100 00 00112335899999998
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+... ..|++ +.++.+++||+....+.+...... ...++.
T Consensus 151 ~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~ 192 (365)
T TIGR00236 151 QAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSE 192 (365)
T ss_pred HHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHh
Confidence 8765211 11333 779999999963222211110000 001112
Q ss_pred cCCCCCCCCCEEEEEc-ccc-ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC
Q 005444 449 VGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG 526 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vG-RL~-~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~ 526 (696)
++ .+++++++++ |.. ..||+..+++++.++.+..++++++++|++.. ...+ .+.+.++..+
T Consensus 193 ~~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~---~~~~~~~~~~ 255 (365)
T TIGR00236 193 FG----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE---PLHKHLGDSK 255 (365)
T ss_pred cC----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH---HHHHHhCCCC
Confidence 33 1234555544 543 35899999999999877678899999865432 0111 1334445667
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCHHH
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
+|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++ +|+++ +.|+++
T Consensus 256 ~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~ 323 (365)
T TIGR00236 256 RVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKEN 323 (365)
T ss_pred CEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHH
Confidence 899998 6667788889995 99999887 56689999999999996 778888998766 56666 479999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
++++|.+++ .|++.+++|+.+...+. +..+++++++.+.+
T Consensus 324 i~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 324 ITKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999997766 79999988887663332 34556666665554
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-17 Score=180.19 Aligned_cols=246 Identities=12% Similarity=0.103 Sum_probs=166.1
Q ss_pred CCC-eEEEEeCCCchH---HHHHH--hhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEE
Q 005444 291 GFP-DFIIGNYSDGNL---VASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 364 (696)
Q Consensus 291 ~~p-DvIh~h~~~~~l---~a~ll--a~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 364 (696)
.++ |+||.+++.... ...++ .++.|+|+|+++|+++......... + ...+...++.||.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI 128 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLI 128 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEE
Confidence 366 999998875421 12222 2344899999999986533211100 0 123567889999999
Q ss_pred eccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccc
Q 005444 365 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 444 (696)
Q Consensus 365 t~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 444 (696)
+.|+...+..++ .|+. ..++.++++..+.....+.
T Consensus 129 ~~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----------------------- 163 (333)
T PRK09814 129 VHSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----------------------- 163 (333)
T ss_pred ECCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc-----------------------
Confidence 999987653211 1332 4567666665433111000
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
. ....++.|+|+|++.+.+++. ...++++|+|+|+|+. .+ ..
T Consensus 164 -----~--~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~ 205 (333)
T PRK09814 164 -----K--TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------EN 205 (333)
T ss_pred -----c--cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------cc
Confidence 0 023456899999999543211 1236799999999976 11 34
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCC-----------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA 593 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-----------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~ 593 (696)
.++|.|+| .++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.++..++|+++.
T Consensus 206 ~~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~ 279 (333)
T PRK09814 206 SANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENG 279 (333)
T ss_pred CCCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCC
Confidence 56899999 7888999999985 54443321 1357899999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 005444 594 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647 (696)
Q Consensus 594 ~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~ 647 (696)
+|++++ +.++++++|..+ +++.+++|++++++.. +++.-..++++
T Consensus 280 ~G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 280 LGFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred ceEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 999998 678888888652 4677899999999876 55554444333
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-17 Score=191.96 Aligned_cols=342 Identities=13% Similarity=0.122 Sum_probs=233.1
Q ss_pred HHhCCCCeEEEEeCCCchHHHH-----HHhhc----------CCCcEEEEecCCCccC---CCCC-------------Cc
Q 005444 287 AELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTK---YPDS-------------DI 335 (696)
Q Consensus 287 ~~~~~~pDvIh~h~~~~~l~a~-----lla~~----------~gip~v~t~H~l~~~~---~~~s-------------~~ 335 (696)
+.+..+||+||+|.+++++++. ++... .+.+.|+|.|+..... ++.. .+
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3446789999999999988777 55321 1456899999975433 2210 11
Q ss_pred cHhhhhhhhh-c----cchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEec
Q 005444 336 YWKKFDEKYH-F----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS 410 (696)
Q Consensus 336 ~~~~~~~~y~-~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIp 410 (696)
.+..+..... + ...+..-..++..|+.|.++|+-.-+-+++.+.. ...|.+....++.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceecee
Confidence 1111110000 0 0123345678999999999998764333332211 1123333345788999
Q ss_pred CCCcCCCCC-CCchHHH---------------------------HHhhhhc----chhhhcCC-----------cccccc
Q 005444 411 PGADMDIYF-PYSEKQK---------------------------RLTALHG----SIEQLLFD-----------PEQNDE 447 (696)
Q Consensus 411 nGvD~~~f~-p~~~~~~---------------------------r~~~~~~----~~~~~l~~-----------~~~~~~ 447 (696)
||||...|. |.....- .+.+.+. ++.+.+.. +...-.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4321110 0000111 11111000 000000
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
..+...+++.++|+|+.|+..+|+.+.+++.+.++.+. ...++||+.|.+.. .|..-++.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 12444478889999999999999999999988877541 13599999998875 45566788889999998777
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECC-
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP- 600 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p- 600 (696)
..++|.|+- .. +..+.+.+-.++|++++||+ +|++|++-+-||.-|.+.+++-.|...|.. ++.|||.|.+
T Consensus 545 ~~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 788999985 22 44677776668999999999 999999999999999999999999999988 8899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-hhhc-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 601 -----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 601 -----------~d~e~la~~I~~~l~-~l~~-----dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.|.+++.+.|.+.+. ...+ .|..|.+|.+++.+.+...|||.+++++|.+-+
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 566777777765443 2223 288899999999998888999999999998854
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.9e-17 Score=179.09 Aligned_cols=250 Identities=14% Similarity=0.131 Sum_probs=160.3
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||++.+.+ +......+++.|+|+++..|.. .|...... . ....+.+|.++++|+
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCc
Confidence 45999999886532 3323344566799988765431 11100000 0 113567899999887
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+... + .| .++.++.|.+......+..... .++.
T Consensus 144 ~~~~~~~----~----------------~g-----~~~~~~G~p~~~~~~~~~~~~~-------------------~~~~ 179 (380)
T PRK00025 144 FEAAFYD----K----------------LG-----VPVTFVGHPLADAIPLLPDRAA-------------------ARAR 179 (380)
T ss_pred cCHHHHH----h----------------cC-----CCeEEECcCHHHhcccccChHH-------------------HHHH
Confidence 6443110 0 11 1255555554332211111111 1223
Q ss_pred cCCCCCCCCCEEE-EEc-ccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-CC
Q 005444 449 VGTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KL 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl-~vG-RL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L 524 (696)
+|+ ++++++|+ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+.+.++++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 665 55666654 444 44444 457899999999877778899999987332 145566667666 55
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------CCCCcch
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAE 587 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-----------------~~gG~~E 587 (696)
. +.+.. +++..+|+ ++|++|.+| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 54432 36788888 599999997 88889999999999987 5667778
Q ss_pred hhccCC--eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 588 IIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 588 iI~dg~--~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
++.++. .+++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 887654 557778889999999997776 89999999999875444
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-17 Score=175.55 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=166.2
Q ss_pred CCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.+||+||+|... ..+.+.++++..|+|++++.|+... +.... .|... .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~~------------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEEN------------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchHH------------HHHHHHHhhhccCCCHH
Confidence 489999999744 3566788888899998876665321 10011 11110 11235678999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..+... ..|++ ..++.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 755211 12333 77899999985 5322211110000 00112
Q ss_pred cCCCCCCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 005444 449 VGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L- 524 (696)
+++ ++++.++++.||+.. .||++.+++++.++.+. ++.+++.|++.. .+.+++.++++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 444 445567788999875 79999999999988643 566666666544 4577777888776
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCeEEEECC-CC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDP-YH 602 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~G~l~~p-~d 602 (696)
.++|+|+| .....++..+++ +||++|.||- | .+.|||+||+|+|+++. +...+.+.. |+.+.. .|
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~~ 323 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGTD 323 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCCC
Confidence 67899998 455678888888 4999999984 4 47899999999999964 445666644 443333 36
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
+++++++|.+++ +|+..+..|
T Consensus 324 ~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 324 PEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHHh----cCchhhhcC
Confidence 899999997766 788777665
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-16 Score=185.99 Aligned_cols=309 Identities=15% Similarity=0.153 Sum_probs=208.0
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-+|+.+..+++.++.++. ..++.+..|..+ |.++++. ...+...-...|-.||.|=+.|+..
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPF----Ps~Eifr--------~LP~r~elL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPF----PSSEIHR--------TLPSRSELLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCC----CChHHHh--------hCCcHHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999888888887764 577888899653 3333221 1111122234688999999999887
Q ss_pred HhhcccccccccccccccccccceeecccccCC--CcEEEecCCCcCCCCCCCchH---HHHHhhhhcchhhhcCCcccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+...-...... -++-....++.... -++.+.|-|||.+.|...... ..+...+
T Consensus 299 ~rhFl~~c~rl--------Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l-------------- 356 (934)
T PLN03064 299 ARHFVSACTRI--------LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL-------------- 356 (934)
T ss_pred HHHHHHHHHHH--------hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH--------------
Confidence 65332211110 00000011222222 246678999999888653221 1111111
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeE--EEEE--eCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN--LVVV--AGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~--LvIv--G~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
++.+ .++.+|++++||+..||+...+.||.++.+.+|+++ ++++ .... ....++..+...++.+++.+
T Consensus 357 r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~l~~~V~~~V~r 428 (934)
T PLN03064 357 KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQKLTSQVHEIVGR 428 (934)
T ss_pred HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHHHHHHHHHHHHH
Confidence 1112 356799999999999999999999999877777653 4444 3211 11122333444555555554
Q ss_pred cCC-CCc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEcCCCCcchhhcc
Q 005444 522 YKL-DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFATCHGGPAEIIEH 591 (696)
Q Consensus 522 ~~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PVvat~~gG~~EiI~d 591 (696)
.+- .+. |.++. ..++.+++..+|+ .|||||+||..|||+++..|||+|+. ++|.|..+|.++.+
T Consensus 429 IN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L-- 502 (934)
T PLN03064 429 INGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL-- 502 (934)
T ss_pred HhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--
Confidence 331 112 44443 3588999999999 59999999999999999999999954 44459999999888
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+..+++|+|.|.+++|++|.+++. .+++.++++.++.++++ ..+||..+++.+++-+
T Consensus 503 ~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 503 GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 456999999999999999998873 48999999999999998 8899999999976643
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-15 Score=170.09 Aligned_cols=169 Identities=12% Similarity=0.181 Sum_probs=146.4
Q ss_pred CCEEEEEc--cccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 005444 457 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 525 (696)
Q Consensus 457 k~iIl~vG--RL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--------- 525 (696)
+..+++++ || +.|.++.+++++.+.....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34577777 99 99999999999999998899999999998753 01245666777777666
Q ss_pred --------------------CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 526 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 526 --------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
++|.|.|+++ ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899998433 4578899996 99999999999999 9999999999999 5667
Q ss_pred chhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 586 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 586 ~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
.++|.|+.||+++ +|.++++++|..+| .+++.|++++..+.+.+ ++||-+.++++|.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 69999999998877 89999999999999998 899999999998775
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-15 Score=165.28 Aligned_cols=328 Identities=14% Similarity=0.164 Sum_probs=183.8
Q ss_pred CCe-EEEEeCCCchHHHHHHhh-cCCCcEEEEecCCCccCCC---C-------CCccHhhhhhhhhccchhhhhHHhhhc
Q 005444 292 FPD-FIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKYP---D-------SDIYWKKFDEKYHFSCQFTADLIAMNN 359 (696)
Q Consensus 292 ~pD-vIh~h~~~~~l~a~lla~-~~gip~v~t~H~l~~~~~~---~-------s~~~~~~~~~~y~~~~~~~~e~~a~~~ 359 (696)
++. +.|+|-|..+.-..++.+ ...+..|+|.|+.-..++. . ....+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 444 448999998654444433 3467789999985332221 0 111233333344445556778899999
Q ss_pred CCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhh--
Q 005444 360 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ-- 437 (696)
Q Consensus 360 AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~-- 437 (696)
||...|+|+-.+.+.+..++ ...=.|+|||+|.+.|....+-.+.....++.|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999887664433221 22224789999998776554333222222223333
Q ss_pred --hcCCccccccccCCCCCCCCCEEEEEcccc-ccCChHHHHHHHHHhhcc----CCC---eEEEEEeCccCCCCCcchH
Q 005444 438 --LLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDRE 507 (696)
Q Consensus 438 --~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~Llea~~~l~~~----~~~---~~LvIvG~g~~~~~~~d~e 507 (696)
.+++. +.+ ..++..+|++.||.. +.||+|.+++|++++... ..+ +-|+|+=... .+...|
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve 348 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHH
Confidence 33332 122 124556789999999 689999999999998531 122 2344543322 111111
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 005444 508 EIA----------------------------------------------------------------------EIEKMHE 517 (696)
Q Consensus 508 ~~~----------------------------------------------------------------------~~~~l~~ 517 (696)
... ..+.+-.
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 111 1122222
Q ss_pred HHHHcCCC----Cc--EEEecc---ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchh
Q 005444 518 LMKTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 588 (696)
Q Consensus 518 li~~~~L~----~~--V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~Ei 588 (696)
.+++++|. ++ |.|... ..|.+-+-+.+.++. .+|+.|+||.||+||.|.+|+.++|+|+|+|+..|+...
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~-GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVR-GCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHH-HSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhc-cCceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 33333432 22 444441 223444557788888 599999999999999999999999999999999999877
Q ss_pred hcc-----CCeEEEE-C--CCCHHHHHHHHHHHHHhhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 589 IEH-----GASGFHI-D--PYHPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 589 I~d-----g~~G~l~-~--p~d~e~la~~I~~~l~~l~~-dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+.+ ...|+.| + ..+.++.++.|.+++..... +...+..+..++.+. .+..+|+.....|.+.|..
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH
Confidence 753 3456654 3 34777888877777654444 556666666666544 5899999999999998764
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-15 Score=140.35 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.3
Q ss_pred CCEEEEEccccccCChHHHHH-HHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Lle-a~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
-++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 23333 234899999
Q ss_pred ccCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.+ +++..+++. +|+++.|+. .++++++++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 67899999999999999999988 567777666678877 889999999998776
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-12 Score=135.24 Aligned_cols=382 Identities=14% Similarity=0.115 Sum_probs=231.6
Q ss_pred HHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHH
Q 005444 205 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 284 (696)
Q Consensus 205 ~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~ 284 (696)
|..|++.|++|+ ++.-.-+ ...+.+...++++|+.+|--+..... ++.-..+ +..|...+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~----p~~~~l~-lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGG----PRVLFLP-LKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCC----chhhhhH-HHHHHHHHHHH
Confidence 446899999999 6532211 12334444567888887765432211 1111111 11222211111
Q ss_pred HHHHhCCCCeEEEEeCCCc---hHHHHHHhhcCCCcEEEEecCCCcc-CCCCCCccHhhhhhhhhccchhhhhHHhhhcC
Q 005444 285 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 360 (696)
Q Consensus 285 i~~~~~~~pDvIh~h~~~~---~l~a~lla~~~gip~v~t~H~l~~~-~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 360 (696)
+.-...+.||+|...++++ -.++.+.+...|.++++..|++..+ ....+......+ ..+....|...-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~l-----V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPL-----VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCch-----HHHHHHHHHHhhccc
Confidence 1111156899999887765 3566677778899999999987543 110000000000 111123466777889
Q ss_pred CEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCC----CCCCchH----HHHHhhhh
Q 005444 361 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI----YFPYSEK----QKRLTALH 432 (696)
Q Consensus 361 D~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~----f~p~~~~----~~r~~~~~ 432 (696)
|.-+|+|....+...+.||-- +...-++.++. -+.+.+. |-+.... ..| ....
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~------------ra~v~YDrPps------~~~~l~~~H~lf~~l~~d~~~f~ar-~~q~ 231 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGIN------------RAKVLYDRPPS------KPTPLDEQHELFMKLAGDHSPFRAR-EPQD 231 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCc------------eeEEEecCCCC------CCCchhHHHHHHhhhccccchhhhc-cccc
Confidence 999999998877666666521 00000111111 0111111 1111110 000 0001
Q ss_pred cchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh-------ccCCCeEEEEEeCccCCCCCcc
Q 005444 433 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-------QLRELVNLVVVAGYIDVNKSKD 505 (696)
Q Consensus 433 ~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~-------~~~~~~~LvIvG~g~~~~~~~d 505 (696)
+.++...|..-....-... ......++++.-...+..++..|++|+..-. ...|.+-++|.|.||.
T Consensus 232 ~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl------ 304 (444)
T KOG2941|consen 232 KALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL------ 304 (444)
T ss_pred chhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch------
Confidence 1122222222111000111 1233446777788999999999999987331 1246788889999988
Q ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeC--CC-CCCCcHHHHHHHHcCCcEEEcCC
Q 005444 506 REEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP--AF-YEAFGLTVVEAMTCGLPTFATCH 582 (696)
Q Consensus 506 ~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P--S~-~E~fGltvlEAMa~GlPVvat~~ 582 (696)
.+++.+.|+++++.. |.+.- .....++....++ +||..|+- |. .=..|++|+....||+||+|-+.
T Consensus 305 ------kE~Y~~~I~~~~~~~-v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f 373 (444)
T KOG2941|consen 305 ------KEKYSQEIHEKNLQH-VQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF 373 (444)
T ss_pred ------hHHHHHHHHHhcccc-eeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecc
Confidence 678888899998864 55543 3677788888888 58887653 33 23579999999999999999999
Q ss_pred CCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 583 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 583 gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
..+.|+|++++||++|+ |.+++|+.+..++...-.|.+..+.+.+++++. +.+.|+...++..
T Consensus 374 kcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 374 KCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred hhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 99999999999999997 899999999999876667999999999999887 5677876655544
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.7e-13 Score=145.88 Aligned_cols=250 Identities=16% Similarity=0.117 Sum_probs=152.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+|++....+ ++.....++.+|+|+++.+ +.+-+ .|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcch-----------HHHHHHHHhHhhccCC
Confidence 45999999887644 5555568888999987544 11111 111110 1234568899999987
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
.+.+. +. .. ..+..++.|++............. .++.
T Consensus 148 ~e~~~-------------------~~-~~-----g~~~~~vGnPv~~~~~~~~~~~~~------------------~r~~ 184 (385)
T TIGR00215 148 FEKAF-------------------YQ-KK-----NVPCRFVGHPLLDAIPLYKPDRKS------------------AREK 184 (385)
T ss_pred CcHHH-------------------HH-hc-----CCCEEEECCchhhhccccCCCHHH------------------HHHH
Confidence 76441 11 00 134556777663322111011111 1223
Q ss_pred cCCCCCCCCCEEEEEc--cccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 449 VGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vG--RL~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.+.. ..+.+.++.++++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 665 66777776653 7776 7899999999999987778999877654322 134455666667666
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcc----------------hh
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPA----------------EI 588 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~----------------Ei 588 (696)
.+|.+.+. +...+|+ ++|++|.+| |.+.+|||+||+|+|.+ ...... .+
T Consensus 252 ~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 66776641 3556788 599999999 88888999999999987 222222 22
Q ss_pred hccCCeEE-EE-CCCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHH
Q 005444 589 IEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGL 632 (696)
Q Consensus 589 I~dg~~G~-l~-~p~d~e~la~~I~~~l~~l~~dp----~~~~~m~~~a~ 632 (696)
+.+..... ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~ 363 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFE 363 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHH
Confidence 22221111 11 2236788888886665 888 87777655443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=112.96 Aligned_cols=92 Identities=26% Similarity=0.513 Sum_probs=85.7
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 553 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 553 vfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
+++.|+...+++..++|+||||+|+|+++.++..+++.++..++.++ |++++.++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999999998 9999999997666 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMT 650 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ 650 (696)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-11 Score=135.36 Aligned_cols=311 Identities=14% Similarity=0.129 Sum_probs=178.9
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++.++.++. ..++.+..|..++ .++. |+.......-...|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~e~--------fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFP----SSEI--------FRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH--------HTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCC----CHHH--------HhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 67899999999888888887764 5778888996433 2211 111111112234688999999999887
Q ss_pred Hhhcccccccccccccccccccceeec-ccccCC--CcEEEecCCCcCCCCCCCchH---HHHHhhhhcchhhhcCCccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQ 444 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~-gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~~~~~l~~~~~ 444 (696)
+...-+..... +.--+.... ++.... -++.+.|-|||.+.|...... ..+...+
T Consensus 209 ~~nFl~~~~r~-------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l------------- 268 (474)
T PF00982_consen 209 ARNFLSCCKRL-------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL------------- 268 (474)
T ss_dssp HHHHHHHHHHH-------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH-------------
T ss_pred HHHHHHHHHHH-------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH-------------
Confidence 66433222111 000000000 122212 256778999998776432111 1111111
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
++.++ .+..+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++... .+...+..+..+++.+++.
T Consensus 269 -~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~ps---r~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 269 -REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPS---REDVPEYQELRREVEELVG 340 (474)
T ss_dssp -HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B----STTSHHHHHHHHHHHHHHH
T ss_pred -HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeecc---CccchhHHHHHHHHHHHHH
Confidence 11121 224799999999999999999999998866555 57788777532 2333445555666666665
Q ss_pred Hc----CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhc
Q 005444 521 TY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 590 (696)
Q Consensus 521 ~~----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~ 590 (696)
+. |-.+ -|.++. ..++.++++.+++ .||+++.+|..+|+.++..|+.+|-.+ +|.|...|.++.+.
T Consensus 341 ~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~ 416 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLS 416 (474)
T ss_dssp HHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-T
T ss_pred HHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcC
Confidence 53 3222 255554 3678999999999 599999999999999999999999865 77899999988884
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+ ..++|+|.|.+++|++|.++++ ..++.++..-+.-++++ ..+|-...++.+++-+
T Consensus 417 ~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 417 E--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp T--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred C--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 4 3589999999999999998874 56777777777777777 7889888888877643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.4e-10 Score=127.09 Aligned_cols=312 Identities=13% Similarity=0.086 Sum_probs=207.7
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-+|+....+++..+.++ ...++.+..|.. +|.++++. .+- +...-...|-.+|.|=.-|+..
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~LP-------~r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-ALP-------PHDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hCC-------ChHHHHHHHHhCccceeCCHHH
Confidence 4489999999988888887665 346788888864 33333211 111 1112234678899999888877
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH--HHHHhhhhcchhhhcCCccccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~--~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
+...-+.+...... ....+......| -.-++.+.|-|||.+.|...... ..+... .++.
T Consensus 191 ~rnFl~~~~~~lg~--~~~~~~~v~~~g---r~v~v~~~PigID~~~~~~~a~~~~~~~~~~--------------lr~~ 251 (474)
T PRK10117 191 RLAFLDCLSNLTRV--TTRSGKSHTAWG---KAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ--------------LKAE 251 (474)
T ss_pred HHHHHHHHHHHcCC--cccCCCeEEECC---eEEEEEEEECeEcHHHHHHHhhchHHHHHHH--------------HHHH
Confidence 65433322111000 000000000001 02257788999998877432211 111111 1111
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
+ .++.+|+.+.|||..||+..=++||.++.+.+| ++.|+-++.. +.+.-.+..+...++.+++.+.+-
T Consensus 252 ~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 252 L-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred c-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHHHHHHHHHHHHh
Confidence 2 356799999999999999999999999877666 4667767532 333344555566667776665332
Q ss_pred -CCc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCCCCcchhhccCC
Q 005444 525 -DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEIIEHGA 593 (696)
Q Consensus 525 -~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVvat~~gG~~EiI~dg~ 593 (696)
.+. |+++ ...++.+++..+|+ +|||++.++..+|+.|+..|+.+|-. +.|.|...|.++.+.
T Consensus 324 ~fg~~~w~Pv~y~---~~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--- 396 (474)
T PRK10117 324 KYGQLGWTPLYYL---NQHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (474)
T ss_pred ccCCCCceeEEEe---cCCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---
Confidence 122 3333 34688999999999 59999999999999999999999965 378899999998883
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 594 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 594 ~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
..++++|.|.+++|++|.+++. ..++.+++.-+..++.+ .++|....++.+++-+.
T Consensus 397 ~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 397 SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 3789999999999999998874 56777777777777777 78898888888877543
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-11 Score=117.33 Aligned_cols=167 Identities=16% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccc
Q 005444 184 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 263 (696)
Q Consensus 184 p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 263 (696)
+..||.+.|+. +|+++|+++||+|+ |++....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45799999999 66667799999999 8877654432111 011111111000
Q ss_pred ccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCcc--CCCCCCccHhhhh
Q 005444 264 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 341 (696)
Q Consensus 264 wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~--~~~~s~~~~~~~~ 341 (696)
.....+.......+.+.+.+. +|||||+|.+.....+.+... ++|.|.+.|+.... ...........+.
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 001111122333444555544 999999998766555444444 99999999986521 1100000111111
Q ss_pred hhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCC
Q 005444 342 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 419 (696)
Q Consensus 342 ~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~ 419 (696)
. .......+.+|.+|++|...++...+ .|++ +.|+.|||||||.+.|.
T Consensus 130 ~--------~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 F--------RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp H--------CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred h--------hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0 11233478999999999988763222 1333 78999999999998873
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.7e-09 Score=112.38 Aligned_cols=252 Identities=16% Similarity=0.185 Sum_probs=155.7
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+||+|++........+.+++..+|+|+++.-.+.-. ...|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 45999999988887788888999999999876554322 12232 234456665543321
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.. .+. .+.++.++-|.+..+... ......+. .
T Consensus 147 -~~------------------------~~~--~~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 -LE------------------------AGV--KPENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred -cc------------------------ccC--CCCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 00 011 145778888877766554 22221111 1
Q ss_pred CCCCCCCCCEEEEEcc-ccccCChHHHHH-HHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 450 GTLSDRSKPIVFSMAR-LDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 450 g~l~~~~k~iIl~vGR-L~~~Kgi~~Lle-a~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
+ ..++++|+.+|. ....+ +..++. +...+.+ ++.++..++... .+++...-.+++.
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~--- 236 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV--- 236 (357)
T ss_pred c---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---
Confidence 1 125666666655 43333 444333 3333332 577776665533 3444444444444
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEEEC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHID 599 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l~~ 599 (696)
++..++.. ++..+|+. +|++|. -+-++|+.|..++|+|+|--..+. .+..+++.+.|..++
T Consensus 237 ~~v~~f~~------dm~~~~~~-ADLvIs----RaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~ 305 (357)
T COG0707 237 VRVLPFID------DMAALLAA-ADLVIS----RAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIR 305 (357)
T ss_pred EEEeeHHh------hHHHHHHh-ccEEEe----CCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEec
Confidence 77777533 48888884 999997 456799999999999999875443 344456666777777
Q ss_pred CCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 600 PYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 600 p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
-.+ ++.+++.|.+++ ++|+..++|.+++++.. ..=.-+.+++.++
T Consensus 306 ~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 306 QSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 554 778888887666 89999999999998764 2323344444443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.1e-09 Score=114.94 Aligned_cols=248 Identities=15% Similarity=0.117 Sum_probs=139.9
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++....+..+.++++.+++|.++.-.+... . .+.++....+|.|+++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~--------g--------------~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP--------G--------------LANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc--------c--------------HHHHHHHHhhCEEEEEccc
Confidence 55999999988777777888999999997653322100 0 1223567788888764432
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
... +++ ..|+.++-|.+..+...+..... ++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~~--------------------~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREKG--------------------LAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchHH--------------------HHhc
Confidence 111 111 35777777777665432211111 1224
Q ss_pred CCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ ++++++|+.+|.=--.+.+.. +.+++..+. ++++++++.|..+ .++ ....+ . ++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~------------~~~---~~~~~--~-~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN------------LDD---SLQNK--E-GY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch------------HHH---HHhhc--C-Cc
Confidence 54 566777766654322344533 334444443 2477766654322 111 11111 1 23
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-----C----cchhhccCCeEEEEC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-----G----PAEIIEHGASGFHID 599 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-----G----~~EiI~dg~~G~l~~ 599 (696)
...++. .+++..+|+ +||++|.= +-+.|+.|++++|+|.|..... + .++.+.+.+.|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~-~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILA-ITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHH-hCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 344532 236788888 49999874 5688999999999999988442 1 233445555676665
Q ss_pred CC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 600 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 600 p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
.. +++.+++++.+++ .|++.+++ ++ +++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~~ll----~~~~~~~~---~~-----~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVEELS----HNNEKYKT---AL-----KKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHHHHH----cCHHHHHH---HH-----HHcCCCCHHHHHHHH
Confidence 32 4677777776655 78766432 21 334555555555443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-09 Score=130.28 Aligned_cols=312 Identities=13% Similarity=0.130 Sum_probs=206.1
Q ss_pred eEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHh
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 372 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 372 (696)
|+|-.|+....+++.++.++. ..++.+..|..+ |.++++. .......-...|-.||.|=..|+..+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPF----Ps~eifr--------~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYK--------TLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCC----CChHHHh--------hCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999888888887664 577888899653 3333221 111112223478899999999988775
Q ss_pred hcccccccccccccccccccceeecccccCCC--cEEEecCCCcCCCCCCCch---HHHHHhhhhcchhhhcCCcccccc
Q 005444 373 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPYSE---KQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 373 ~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~--k~~VIpnGvD~~~f~p~~~---~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
..-......-.. ..... +...++.+... ++.+.|-|||...|..... ...+...+ ++
T Consensus 271 ~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l--------------~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL--------------IK 332 (854)
T ss_pred HHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--------------HH
Confidence 433221110000 00000 00012222222 5678899999887643221 11122111 11
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY- 522 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~- 522 (696)
.++ ++++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+... ..+.-.+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~p---sr~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANP---ARGKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecC---CCcccHHHHHHHHHHHHHHHHHH
Confidence 122 24678999999999999999999999998777765 466666543 2233344555566666666653
Q ss_pred ---CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-------------------cEE
Q 005444 523 ---KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------------------PTF 578 (696)
Q Consensus 523 ---~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-------------------PVv 578 (696)
|-.+ -|+++- ..++..|+..+|+ +||+++.++..+|+.|+..|+.+|-. ..|
T Consensus 407 ~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLi 482 (854)
T PLN02205 407 ETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLV 482 (854)
T ss_pred hhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceE
Confidence 2222 255553 3678999999999 59999999999999999999999854 377
Q ss_pred EcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 579 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 579 at~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.|...|.+..+. ..++|+|.|.+++|++|.+++. ..++.++..-+.-++++ .+++-...++.++.-.
T Consensus 483 LSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l 549 (854)
T PLN02205 483 VSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDL 549 (854)
T ss_pred eeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Confidence 788888887772 3789999999999999998874 56666666666667777 7788888888776543
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.1e-09 Score=117.90 Aligned_cols=318 Identities=14% Similarity=0.097 Sum_probs=203.9
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.=|+|-.|+....+++..+..+. ..++.+..|..++. +.+.. -..+...-.-.+-.+|+|-..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEvfr--------~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEVFR--------CLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHHHh--------hCchHHHHHHHhhcCCeeEecCHHH
Confidence 33999999999888888877664 36688888875432 22111 1111111123577899999988877
Q ss_pred Hhhcccccccccccccccccccceee-cccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVV-HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~-~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
+...-+...+... ++ +...+. +|.+-...++..+|=|||...|...........+ ..++.+ .+
T Consensus 215 ~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~-~~el~~----------~~ 278 (486)
T COG0380 215 ARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEK-VLELKA----------EL 278 (486)
T ss_pred HHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhH-HHHHHH----------Hh
Confidence 6644333322110 00 000011 1111012356678999998766533211110000 001111 11
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC-C
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-L 524 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L 524 (696)
..++.+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... ..-++.+.....+.+++.+.+ .
T Consensus 279 ----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~~i~~~V~rIN~~ 351 (486)
T COG0380 279 ----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRLQIEELVGRINGE 351 (486)
T ss_pred ----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 2348899999999999999999999999986665 466776665433 122233344555555555432 2
Q ss_pred CCcEEEec--cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCCCCcchhhccCCeEEEE
Q 005444 525 DGQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 525 ~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
.+.+.|.. +....++..+++.+++ .+|+++.+++-+|+.++..|+.+|- -|.|-|...|.+..+.+ .+++
T Consensus 352 fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV 427 (486)
T COG0380 352 FGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV 427 (486)
T ss_pred cCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE
Confidence 23333322 1224678899999999 5999999999999999999999984 58888998888887744 7999
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 599 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 599 ~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+|.|.+++|++|..++. ..++.+++.-+.-++.+ .++|-...+..+++-+
T Consensus 428 NP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 428 NPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred CCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 99999999999998874 67777776666667676 7778888887765543
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-11 Score=116.02 Aligned_cols=160 Identities=18% Similarity=0.254 Sum_probs=84.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccc
Q 005444 187 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 266 (696)
Q Consensus 187 GG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wis 266 (696)
||.+.|+. +|+++|.++||+|+ |+|...+... .... ..++.+.++|+......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 89999999 66777799999999 8886643321 1111 23688888887654210
Q ss_pred cCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhc
Q 005444 267 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 346 (696)
Q Consensus 267 r~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~ 346 (696)
...+ .+...+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|. ...+
T Consensus 54 -~~~~----~~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~--~~~~-- 119 (160)
T PF13579_consen 54 -LRLL----RFLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWK--RRLY-- 119 (160)
T ss_dssp -GGHC----CHHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH--HHHH--
T ss_pred -hhhH----HHHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchh--hHHH--
Confidence 0011 1222233333 22367999999999766677777766789999999997532111 1111 1111
Q ss_pred cchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC
Q 005444 347 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 412 (696)
Q Consensus 347 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG 412 (696)
...+...++.||.|+++|+..++...+ .|+ ...|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~--~~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGV--PPDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCC--CCCcEEEeCcC
Confidence 123667899999999999987763211 233 37899999998
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-09 Score=120.45 Aligned_cols=135 Identities=13% Similarity=0.135 Sum_probs=107.0
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcccc
Q 005444 473 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 552 (696)
Q Consensus 473 ~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aad 552 (696)
+..+++++++.+..|+++|-| |.+.+ ...+|.++ +++ ++.+.+.|+.. ..+-.++. .||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~-~~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQ-TCD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHH-hcc
Confidence 899999999998889999999 66544 12577777 666 66677776433 34556666 499
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 553 AFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 553 vfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
+++-.|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++.+|+++++++|.+++ .||+.+++.-..-
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 999999999999999999999999999854 366788866 88999999999999998877 8998776654444
Q ss_pred HHHH
Q 005444 632 LKRI 635 (696)
Q Consensus 632 ~~~v 635 (696)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.3e-10 Score=115.76 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=101.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcc-ccceeee--
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV-- 241 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~-~~~~e~i-- 241 (696)
||++||....|- -.+||...++. .|+++|+++||+|. |+++.+........ .......
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988752 47899999999 66666799999999 99888643211100 0000000
Q ss_pred --------c----------CCCceEEEEecccCcccccccccccCCCcc-------c-HHHHH--HHHHHHHHHHhCCCC
Q 005444 242 --------S----------GTEHTHILRVPFRSEKGILRQWISRFDVWP-------Y-LETFT--EDVGSEITAELQGFP 293 (696)
Q Consensus 242 --------~----------~~~~v~I~rvp~~~~~~~~~~wisr~~i~p-------~-l~~f~--~~~~~~i~~~~~~~p 293 (696)
. ..+++.++.+.... +.+|..++. . ..+|+ ..+..++...+..+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 00133333332211 223444441 1 22332 223333333345699
Q ss_pred eEEEEeCCCchHHHHHHhhcC-------CCcEEEEecCCCccCCCC-C-----CccHhh--hhhhhhccchhhhhHHhhh
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPD-S-----DIYWKK--FDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-------gip~v~t~H~l~~~~~~~-s-----~~~~~~--~~~~y~~~~~~~~e~~a~~ 358 (696)
||||||+|.+++++.+++... ++|+|+|+|++....... . .+.+.. ....+.+...+...+..+.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999998876 599999999975543211 1 111111 1112223334455668899
Q ss_pred cCCEEEeccHHHHhhc
Q 005444 359 NADFIITSTYQEIAGT 374 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~ 374 (696)
.||.|+|+|+..+.+.
T Consensus 215 ~AD~v~TVS~~Ya~Ei 230 (245)
T PF08323_consen 215 YADKVTTVSPTYAREI 230 (245)
T ss_dssp HSSEEEESSHHHHHHT
T ss_pred hcCEeeeCCHHHHHHH
Confidence 9999999999987643
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-08 Score=109.42 Aligned_cols=124 Identities=15% Similarity=0.058 Sum_probs=82.1
Q ss_pred CCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 454 DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
+.+++++++.|.... .+-...+++++..+ +.+++ .+|.... . . ..+.++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceE
Confidence 345567788888754 23344555665543 34544 4444332 0 0 24567899
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HP 603 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~ 603 (696)
+.+ .++..++ +. .+|++|.- +-..|+.||+++|+|+|....++ .++.++..+.|..+++. +.
T Consensus 292 ~~~----~~p~~~l---l~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVD----FVPHDWL---LP-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeC----CCCHHHH---hh-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 998 4555554 45 59999963 44589999999999999986655 35556666778877765 67
Q ss_pred HHHHHHHHHHH
Q 005444 604 DQAAELMADFF 614 (696)
Q Consensus 604 e~la~~I~~~l 614 (696)
+++++++.+++
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 88888887765
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.8e-09 Score=100.84 Aligned_cols=177 Identities=19% Similarity=0.212 Sum_probs=115.6
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeec
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~ 242 (696)
|.||+||+..|.|.. .||.|.++. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 358999999999854 599999999 88888999999999 9987632211 1 11
Q ss_pred CCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHH-----HHhCCCCeEEEEeCCC-chHHHHHHhh--cC
Q 005444 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT-----AELQGFPDFIIGNYSD-GNLVASLLAY--KM 314 (696)
Q Consensus 243 ~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~-----~~~~~~pDvIh~h~~~-~~l~a~lla~--~~ 314 (696)
...+++++.+|.....+ +..+.-++...+. +.-+.+.|||+.+... ++.+..++.+ ..
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 22468999988753211 1122212211111 1112357899987766 4555555543 34
Q ss_pred CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccce
Q 005444 315 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 394 (696)
Q Consensus 315 gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~ 394 (696)
|.|+++..|+++..+ .+|..+..+|. ...|+++.+.||.+|+-|....+..++. |
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~---y------------- 172 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER---Y------------- 172 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH---c-------------
Confidence 779999999986533 35655555443 2468889999999999998765432221 1
Q ss_pred eecccccCCCcEEEecCCCc
Q 005444 395 VVHGIDVFDPKFNIVSPGAD 414 (696)
Q Consensus 395 ~~~gi~~~~~k~~VIpnGvD 414 (696)
+ ..+..+||+|.|
T Consensus 173 -----~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 -----G--RKKSTFIAYGAD 185 (185)
T ss_pred -----C--CCCcEEecCCCC
Confidence 1 378899999987
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-07 Score=99.63 Aligned_cols=112 Identities=17% Similarity=0.186 Sum_probs=74.8
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEEC
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 599 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~ 599 (696)
+.++|.+.+ .++..+ ++. .+|++|..+ | ..|+.||+++|+|+|+....+ ..+.+.+.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898887 455444 455 599999763 2 358999999999999974443 334455666787776
Q ss_pred CC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 600 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 600 p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.. ++++++++|.+++ .|++.++.+.+-+ +.+...-.-+..++.++++.
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l~-~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKMR-AEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHhh
Confidence 43 5788888887766 7888766664433 33334456666666666553
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.4e-07 Score=99.31 Aligned_cols=163 Identities=14% Similarity=0.223 Sum_probs=104.9
Q ss_pred EEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEe-CccCCCCCcchHHHHHHHHHHHHHHHcCCC----------
Q 005444 459 IVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD---------- 525 (696)
Q Consensus 459 iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG-~g~~~~~~~d~e~~~~~~~l~~li~~~~L~---------- 525 (696)
+++..|.-. ..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+..++.+..
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~~~~~ 274 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSEDQTS 274 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCccccch
Confidence 444455442 256788999999999755 678887665 4443 34455555544443
Q ss_pred ----CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc---chhhccC----Ce
Q 005444 526 ----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG----AS 594 (696)
Q Consensus 526 ----~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~---~EiI~dg----~~ 594 (696)
+++.+..+ ..+++.+++ +||++|..| |.+..|++++|+|+|.....+. ..+.+.. ..
T Consensus 275 ~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~ 342 (396)
T TIGR03492 275 LFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGG 342 (396)
T ss_pred hhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCC
Confidence 22444432 346788888 599999874 5556999999999999875443 2222321 24
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 595 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 595 G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+..+...+++.+++.+.+++ .|++.+++|.+++++...+....+.+++.+.+
T Consensus 343 ~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 343 SVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred EEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45555667888888887665 89999888886565554344555555555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.1e-07 Score=96.60 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=79.9
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + .-.++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~---------------------~-~~~~ni~~~~~- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA---------------------D-PRPGNIHVRPF- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc---------------------c-ccCCCEEEeec-
Confidence 456689999988775 666776654 5788888876532 0 11568998863
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCCCCcc------hhhccCCeEEEECCC--CHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGL-TVVEAMTCGLPTFATCHGGPA------EIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGl-tvlEAMa~GlPVvat~~gG~~------EiI~dg~~G~l~~p~--d~e~ 605 (696)
...++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+.. +.++..+.|..+++. +++.
T Consensus 240 ----~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 240 ----STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred ----ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 23578899995 99999752 44 599999999999998765533 333455567776543 5677
Q ss_pred HHHHHH
Q 005444 606 AAELMA 611 (696)
Q Consensus 606 la~~I~ 611 (696)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777663
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.8e-06 Score=89.10 Aligned_cols=156 Identities=15% Similarity=0.176 Sum_probs=115.0
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-----------
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD----------- 525 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~----------- 525 (696)
+++++..+. ...--+.+++++..+++.+|++.+++|=-.++ -.+.+.+++++.|+.
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~~~~~~ 297 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQGDPPF 297 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecCCCCCC
Confidence 788888887 22333457899999999999999999988776 367888899988773
Q ss_pred -CcEEEeccccccCChhHHHHHHHccccE-EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEEC
Q 005444 526 -GQFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHID 599 (696)
Q Consensus 526 -~~V~flG~~~~~v~~~el~~~la~aadv-fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~ 599 (696)
+.=.++| ...+|+..+|. .+|+ ||=-|+.+--|--++|+.++|+|||.- +.....+-+...+.|+.++
T Consensus 298 ~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~ 371 (419)
T COG1519 298 SDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE 371 (419)
T ss_pred CCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC
Confidence 1112343 25789999999 5888 665677766688899999999999996 3333344444556788887
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
|.+.++.++ +.+..|++.+++|++++...+.+
T Consensus 372 --~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 372 --DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred --CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 566666666 34458899999999999988754
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.1e-06 Score=96.30 Aligned_cols=265 Identities=16% Similarity=0.166 Sum_probs=147.2
Q ss_pred CCCeEEEEeC-CCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNY-SDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~-~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.+||+|.++. ....+.++++|..+++|+++ +|+-..+. +. .+...+ ...-+-||..+++++.
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~~----~eE~~r--------~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----GA----IDESIR--------HAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----CC----chHHHH--------HHHHHHHhhccCCCHH
Confidence 4899999887 44577889999999999874 44432211 00 111111 1223456777788877
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEec-CCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIp-nGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..+... .-|.+ +.++.++- +++|.-......... +..+.
T Consensus 155 ~~~~L~--------------------~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~------------------~~~~~ 194 (365)
T TIGR03568 155 YRQRVI--------------------QMGED--PDRVFNVGSPGLDNILSLDLLSKE------------------ELEEK 194 (365)
T ss_pred HHHHHH--------------------HcCCC--CCcEEEECCcHHHHHHhhhccCHH------------------HHHHH
Confidence 654211 01222 45666664 466643222111111 11123
Q ss_pred cCCCCCCC-CCEEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEe--CccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 449 VGTLSDRS-KPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA--GYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 449 ~g~l~~~~-k~iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG--~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
+|+ +++ +.+++.+-+-. +....+.+.+.+..+.+...++ +++. .++. +....+.+.++..+
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~--------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG--------SRIINEAIEEYVNE-- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC--------chHHHHHHHHHhcC--
Confidence 554 333 44445555433 3333344444444443332234 4443 2222 11122333333211
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
.++|.+++ +++..++..+++. |+++|--| +-.+.||.++|+|||+ .+.-.|.+..|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 45799998 7889999999996 99998532 2234899999999995 45678888888888878 5689
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+++.+++.+++ +++.++.+ ......|-....++++.+
T Consensus 327 ~~I~~a~~~~~-----~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 327 EEIVKAIEKLL-----DPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred HHHHHHHHHHh-----ChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 99999987633 44433332 111234655566666554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.9e-07 Score=84.46 Aligned_cols=123 Identities=20% Similarity=0.207 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 282 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~ 282 (696)
++++.|+++|++|+ ++|..... +......++.+++++.... ..++++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 56667799999999 88874221 1111123678888764321 1344442 22 444
Q ss_pred HHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCC-CcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcC
Q 005444 283 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 360 (696)
Q Consensus 283 ~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~g-ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 360 (696)
+.+.+ .+||+||+|...+ ++++.++++..+ +|++++.|+..... .+ ...+ + +. ...+.+++.|
T Consensus 68 k~ik~---~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~-~~~~-~---~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKK---EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SS-KKKK-L---KK-----FIIKFAFKRA 132 (139)
T ss_pred HHhcc---CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CC-chHH-H---HH-----HHHHHHHHhC
Confidence 44443 4899999999887 788888888888 99999999864311 11 1111 0 11 1345689999
Q ss_pred CEEEecc
Q 005444 361 DFIITST 367 (696)
Q Consensus 361 D~IIt~S 367 (696)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-05 Score=87.00 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=51.7
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcch------hhccCCeEEEE
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 598 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~E------iI~dg~~G~l~ 598 (696)
.+++.+.++ .+ .++..+++. ||++|.-+- ..++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~----~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRI----TT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEEC----Ch-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 467888873 22 578888895 999998642 247999999999999987765333 45666788888
Q ss_pred CCCCH
Q 005444 599 DPYHP 603 (696)
Q Consensus 599 ~p~d~ 603 (696)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 87666
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00025 Score=81.14 Aligned_cols=138 Identities=14% Similarity=0.005 Sum_probs=89.5
Q ss_pred CCEEEEEcccccc-----CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 457 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 457 k~iIl~vGRL~~~-----Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
.+++++.|..... +-+..+++|++++ + .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4788899987542 2345566666654 3 46666555422 00 2457789988
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhhccCCeEEEECCC--CHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI~dg~~G~l~~p~--d~e~ 605 (696)
+ .+|..++..- . .+++||.= |-..++.||+.+|+|+|+-.. ...+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 7 5665555421 1 37888863 445689999999999999743 3355666667788888764 5577
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
+.++|.+++ +||++++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 777776665 888877665544443
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.4e-07 Score=94.96 Aligned_cols=103 Identities=24% Similarity=0.394 Sum_probs=65.6
Q ss_pred HHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc-----CCeEEEE-C--CCCHHHHHHHHHHHHHhh
Q 005444 546 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH-----GASGFHI-D--PYHPDQAAELMADFFGKC 617 (696)
Q Consensus 546 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d-----g~~G~l~-~--p~d~e~la~~I~~~l~~l 617 (696)
+.+ .|.+.|+||.||++|.|..|.--+|+|-|.|+..|+.-.+++ ..-|+++ | -..+++-.+.+.+++...
T Consensus 497 FVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F 575 (692)
T KOG3742|consen 497 FVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF 575 (692)
T ss_pred Hhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH
Confidence 344 699999999999999999999999999999999987655532 2356654 2 124555555555554222
Q ss_pred hcCHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHH
Q 005444 618 KENPSHWKKISDGG-LKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 618 ~~dp~~~~~m~~~a-~~~v~~~ysw~~~a~~l~~ 650 (696)
. ....++++-++. -++...-.+|+.+..-|.+
T Consensus 576 ~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 576 C-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred H-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 1 334444444333 3344445666665544433
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.9e-05 Score=81.09 Aligned_cols=98 Identities=14% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
+.+++++|..+..+....+++++.++. +++++. |+|.+.. ..++++++++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 458999999998776667788887643 344443 5565533 134566666553 47888873
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
..++..+|+. ||++|.+ .|.|+.|++++|+|+|+....
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence 3468899995 9999984 579999999999999987553
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.32 E-value=2e-05 Score=87.88 Aligned_cols=185 Identities=12% Similarity=0.101 Sum_probs=119.3
Q ss_pred cccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc
Q 005444 443 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 522 (696)
Q Consensus 443 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~ 522 (696)
...|+.+|+ +++..++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+++.
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345778998 67776677777654 455677888888877779999998875432 135788888899
Q ss_pred CCC-CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhc------cCCeE
Q 005444 523 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASG 595 (696)
Q Consensus 523 ~L~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~------dg~~G 595 (696)
|+. ++|.|.+ ..+.++-.+.+.. +||++=|-.+-| |.|.+||+.+|+|||+-.....+.-+. =|-.-
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 5566777777774 999997744433 789999999999999875433332221 12223
Q ss_pred EEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 005444 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER--YTWKIYSERLMTLAGV 654 (696)
Q Consensus 596 ~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~--ysw~~~a~~l~~ly~~ 654 (696)
++.. |.++..+.-..+. .|++.++.+.++-++...+. |+-+.+++.+++.|+.
T Consensus 412 lIA~--s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIAD--SEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB-S--SHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcCC--CHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3333 7888887775544 89999999999988776544 8899999999999875
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.5e-05 Score=81.89 Aligned_cols=250 Identities=15% Similarity=0.174 Sum_probs=133.9
Q ss_pred CCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCC-CccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 292 FPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHAL-EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 292 ~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l-~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+||+|..+.-.. .+.++++|..+++|++. +|+- -..... +. ..+...+ ...-+-||.-+++|+.
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~-~g----~~de~~R--------~~i~~la~lhf~~t~~ 132 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRT-EG----MPDEINR--------HAIDKLAHLHFAPTEE 132 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TT-SS----TTHHHHH--------HHHHHH-SEEEESSHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccC-CC----Cchhhhh--------hhhhhhhhhhccCCHH
Confidence 999999877443 67889999999999654 4442 111100 00 1122221 1234578999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
.++.+.. -|++ +.++.++-| ++|.-.. .. ....+.+. .
T Consensus 133 ~~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l~~-----~~---~~~~~~~~-----------~ 171 (346)
T PF02350_consen 133 ARERLLQ--------------------EGEP--PERIFVVGNPGIDALLQ-----NK---EEIEEKYK-----------N 171 (346)
T ss_dssp HHHHHHH--------------------TT----GGGEEE---HHHHHHHH-----HH---HTTCC-HH-----------H
T ss_pred HHHHHHh--------------------cCCC--CCeEEEEChHHHHHHHH-----hH---HHHhhhhh-----------h
Confidence 7652211 1333 678887754 3332100 00 00000000 0
Q ss_pred cCCCC-CCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 449 VGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 449 ~g~l~-~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
.+++. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ .....+.+.++++
T Consensus 172 ~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~-- 238 (346)
T PF02350_consen 172 SGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY-- 238 (346)
T ss_dssp HHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT---
T ss_pred HHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc--
Confidence 01111 234444555544332 34466788888888776 7898988887444 2244555555554
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
++|+++. .++..++..+++. |+++|-= .| .+. ||.++|+|||.- +.|--.+.+..+.+-+ +. .|
T Consensus 239 -~~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~ 304 (346)
T PF02350_consen 239 -DNVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TD 304 (346)
T ss_dssp -TTEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SS
T ss_pred -CCEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CC
Confidence 3899997 7888999999995 8888743 35 788 999999999998 5566677776665555 76 68
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
.+++.++|.+++ .+++.+..+
T Consensus 305 ~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 305 PEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp HHHHHHHHHHHH----H-HHHHHHH
T ss_pred HHHHHHHHHHHH----hChHHHHhh
Confidence 999999997776 454444443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00021 Score=79.51 Aligned_cols=159 Identities=14% Similarity=0.066 Sum_probs=104.7
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+++.++.|..... .+.+-.++..+.+. ++++++..++.+ . ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 345567777776654 33333333444342 577777776522 0 1226778898887
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhccCCeEEEEC--CCCHHHHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHID--PYHPDQAAE 608 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~dg~~G~l~~--p~d~e~la~ 608 (696)
.++..++.. .+|++|+. |--.++.||+..|+|+|+-. ....++.+++-+.|..+. .-+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 666666554 69999987 33458999999999999964 334567777888898877 578999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|.+++ .|+..++...+... -..+.-.-+..++.++++.+
T Consensus 361 av~~vL----~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHHh
Confidence 997777 78877665544433 33355555556666666543
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00076 Score=72.89 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=44.9
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC---CcchhhccCCeEEEECCCCHHHHHHHHHHH
Q 005444 543 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADF 613 (696)
Q Consensus 543 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g---G~~EiI~dg~~G~l~~p~d~e~la~~I~~~ 613 (696)
...+++. ||++|- +-|....||...|+|+|.+-.| +.-+.+.+ .|+++...|++++.+.+...
T Consensus 242 ~~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 242 GLDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHh
Confidence 3456664 899994 4577789999999999987443 33344433 47888888999988866443
|
They are found in archaea and some bacteria and have no known function. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00016 Score=85.04 Aligned_cols=144 Identities=15% Similarity=0.072 Sum_probs=104.4
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHH---HHHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVE---CYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Lle---a~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
+.|+..+++...++++-|+...|.... ++. -+.+++... ....+++.|...+ .+..-+..++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666899999999999999999888 544 455554431 1255666665443 2344455566666666
Q ss_pred HH----cCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~----~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+. ..+.+ +|.|+. ... =.+.+.+-.++||-.+-|. .|+.|.+=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYN-VSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 53 23445 688886 233 3455565557999998876 79999999999999999999999999999987
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|+|+|-.
T Consensus 672 vG~eN~fiFG~ 682 (797)
T cd04300 672 VGEENIFIFGL 682 (797)
T ss_pred hCcCcEEEeCC
Confidence 789999953
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00093 Score=73.21 Aligned_cols=143 Identities=21% Similarity=0.255 Sum_probs=88.9
Q ss_pred CCCCCEE-EEEcc-ccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 454 DRSKPIV-FSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 454 ~~~k~iI-l~vGR-L~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
++++++| +..|. -.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+..-.+..
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 5566654 44443 333 3556888999999999999999998875433 12234455555544333433
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhh----------------ccCC
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEII----------------EHGA 593 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI----------------~dg~ 593 (696)
. .++-+..++ +||+.+..| |.+.+|++..|+|.|.. ..+.+.-.+ -+..
T Consensus 250 ~--------~~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 250 I--------EGESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred c--------CCchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 3 235677888 499888765 99999999999999986 433332222 1100
Q ss_pred --eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHH
Q 005444 594 --SGFHIDPYHPDQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 594 --~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~ 625 (696)
-=++-+.-+++.+++++.+++ .|++.++
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~ 345 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELL----ENPEKRK 345 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHh----cCHHHHH
Confidence 011223347888888886665 7776643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00012 Score=85.97 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=107.4
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
..|...+++...++++-|+...|.... ++.. +.+++... ....+++.|...+ .|..-+..++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 347666899999999999999999888 5554 55554321 1366777765544 3455566677777777
Q ss_pred H----HcCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~----~~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+ ...+.+ +|.|+. ... -.+.+.+-.++|+-.+-|. .|+.|.+=+-||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~-vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYS-VSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCC-HHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 333445 788886 233 3456666557999998876 89999999999999999999999999999976
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|||.|-.
T Consensus 685 vG~eN~~~fG~ 695 (815)
T PRK14986 685 VGEENIFIFGN 695 (815)
T ss_pred cCCCcEEEeCC
Confidence 889999954
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0094 Score=67.61 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=79.1
Q ss_pred CCCCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 455 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 455 ~~k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~ 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec
Confidence 34567788887643 22244444555432 456776654321 1121211 23566566
Q ss_pred cccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEECC-----
Q 005444 533 AQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHIDP----- 600 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~p----- 600 (696)
.++..++.. + .++ ||. -+--++++||+++|+|+|+- +....+..+.+. +.|+-+..
T Consensus 330 ----w~pQ~~iL~---h-~~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 397 (459)
T PLN02448 330 ----WCDQLKVLC---H-SSVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEE 397 (459)
T ss_pred ----cCCHHHHhc---c-CccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccC
Confidence 566556554 2 444 664 23346899999999999996 444455556553 46666631
Q ss_pred --CCHHHHHHHHHHHHHhhhcCH-HHHHHHHHHHHH
Q 005444 601 --YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 633 (696)
Q Consensus 601 --~d~e~la~~I~~~l~~l~~dp-~~~~~m~~~a~~ 633 (696)
-+.+++++++.+++ .++ +..++|.+++.+
T Consensus 398 ~~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 398 TLVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred CcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 26678888887776 554 334445555443
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00037 Score=81.83 Aligned_cols=144 Identities=16% Similarity=0.107 Sum_probs=103.0
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
+.|+..+++...++++-|+...|.... ++.. +.+++..- ....+++.|...+ .|..-+..++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 456666899999999999999999888 5544 44454321 1346666665443 2334445555555555
Q ss_pred HHc----CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~~----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 2445 688886 2333 455555557999998776 79999999999999999999999999999987
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|+|+|-.
T Consensus 669 vG~eN~fiFG~ 679 (794)
T TIGR02093 669 VGAENIFIFGL 679 (794)
T ss_pred hCcccEEEcCC
Confidence 789999953
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.002 Score=69.62 Aligned_cols=199 Identities=19% Similarity=0.138 Sum_probs=114.0
Q ss_pred CCCCeEEEEeCC-CchHHHHHHhhcCC--CcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNYS-DGNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~~-~~~l~a~lla~~~g--ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||++++-++ +.|+-....-|+.+ +|+|+.+-- |-+-|+.-. -....+..|++++.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechhh-----------HHHHHHHhhHeeee
Confidence 569999987664 55765444455555 887765431 222333211 11346788999998
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
=+.|.+ +|... .-..+.|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~k~------g~~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYDKF------GLPCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHHhc------CCCeEEeCChhhhhccccccHHH--------------------H
Confidence 877654 22111 112344433 2333222232221 2
Q ss_pred ccccCCCCCCCCC-EEEEEcc-ccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-H
Q 005444 446 DEHVGTLSDRSKP-IVFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-T 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~-iIl~vGR-L~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~ 521 (696)
++.+|+ +.+++ +.+..|. -.+ .+.+..+++++.++.+++|+.++++--.... .+.+..... .
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 344676 44444 4455553 222 4566778889999998999999998876543 222222222 2
Q ss_pred cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 522 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 522 ~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
......+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|++
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 2221223332 345677777 489877654 99999999999999987
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0043 Score=66.68 Aligned_cols=118 Identities=13% Similarity=0.136 Sum_probs=89.0
Q ss_pred CCcEEEeccccccCCh-hHHHHHHHccccEEEeCCC---CCC---CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 525 DGQFRWIAAQTNRARN-GELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~-~el~~~la~aadvfV~PS~---~E~---fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
.+++..+|. ... ..+..++.. .++++.-++ .++ +.+-+.|+|+||.|-+++...+..-.+.+|..-++
T Consensus 236 ~~~~~yIg~----~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv 310 (373)
T COG4641 236 EPNVQYIGY----YNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV 310 (373)
T ss_pred cchhhhhhc----cCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE
Confidence 345666663 223 566666663 677665433 222 36789999999999999998888888888876666
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.. |..++.+++..++ ..++.++++.+.|.+++...||.+.-+.++++...
T Consensus 311 ~~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 311 YQ--DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred ec--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 54 8999999996655 89999999999999999999999887766666543
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0034 Score=70.52 Aligned_cols=180 Identities=14% Similarity=0.160 Sum_probs=119.9
Q ss_pred cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 005444 447 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 525 (696)
Q Consensus 447 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 525 (696)
...|+ +++..++++.++. .|-...++.-+.++.+.-|+-.|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 34787 5666555555554 3444444444444445569999999999865 23467899999999984
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------CCCCcchhhc-cCCeEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 597 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-------~~gG~~EiI~-dg~~G~l 597 (696)
.+++|.+ +.++++-...+. -+|+++=+--|-| +.|.+||+-+|+||++- ++|+ .++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 7899998 677777777777 4999996644444 67899999999999874 3332 2222 2333334
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~--~ysw~~~a~~l~~ly~ 653 (696)
.+ +.++..++-..| -.|...+++.+..-.+.... -|+.+.++++++++|.
T Consensus 561 A~--s~~dYV~~av~~----g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVAF----GSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHHh----cccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 43 556666555443 36777777766555444433 4889999999999964
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00099 Score=78.28 Aligned_cols=143 Identities=14% Similarity=0.049 Sum_probs=103.8
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccCC-----CeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~~-----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
+.|+..+++...++++-|+...|.... ++.. +.++++. | ...+++.|...+ .|..-+..++.+..+
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 594 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKV 594 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHH
Confidence 346666889999999999999999888 5554 4444432 2 256777665544 244445556666666
Q ss_pred HHHcC----CCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhc
Q 005444 519 MKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 590 (696)
Q Consensus 519 i~~~~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~ 590 (696)
++..+ +.+ +|.|+. ... -.+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.+
T Consensus 595 a~~in~Dp~v~~~lkVVFle----nY~-VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e 669 (798)
T PRK14985 595 AEVINNDPLVGDKLKVVFLP----DYC-VSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAE 669 (798)
T ss_pred HHHhcCChhhCCceeEEEeC----CCC-hHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHH
Confidence 64432 344 688886 233 3455555557999998876 8999999999999999999999999999997
Q ss_pred c--CCeEEEECC
Q 005444 591 H--GASGFHIDP 600 (696)
Q Consensus 591 d--g~~G~l~~p 600 (696)
+ +.|||.|-.
T Consensus 670 ~vG~eN~f~fG~ 681 (798)
T PRK14985 670 QVGEENIFIFGH 681 (798)
T ss_pred HhCcCcEEEeCC
Confidence 6 789999954
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0034 Score=73.34 Aligned_cols=144 Identities=16% Similarity=0.116 Sum_probs=110.6
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHH----HHHHhh-ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVE----CYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle----a~~~l~-~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
.|+-.+++...++++-|+...|..+..+. .+..++ ...|.+.+++.|...+ .|-.-+..++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 45555789999999999999998877653 444444 3345566666665544 35566677778888888877
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhc--cCCeEEEEC
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHID 599 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~--dg~~G~l~~ 599 (696)
...+|.|+. ..+ -.+.+.+-.++||-.+.|. .|+.|.+-+-||.-|.++|+|-.|...|+.+ ++.|||.|-
T Consensus 555 ~~lkVvFl~----nYd-vslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYD-VSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCC-hhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 677899996 232 3456666558999888775 7999999999999999999999999999997 899999996
Q ss_pred CC
Q 005444 600 PY 601 (696)
Q Consensus 600 p~ 601 (696)
..
T Consensus 630 ~~ 631 (750)
T COG0058 630 ET 631 (750)
T ss_pred Cc
Confidence 43
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.033 Score=58.87 Aligned_cols=166 Identities=11% Similarity=0.069 Sum_probs=112.8
Q ss_pred CEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 458 PIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 458 ~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
++.+-+|+ -|+-.+...+++++.+.. ..++++++.=+-+. ...+|++++.+..+++--.+++..+- +
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 44444554 566777777788777654 36788887766543 23578889999998887657888876 5
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCH--HHHHHHHHH
Q 005444 537 RARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHP--DQAAELMAD 612 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~--e~la~~I~~ 612 (696)
.++.+|...+++. +|+.++-- +.+|+|+ ++=.+..|+||+.+ +++-..++.+.|.. ++++..+. ..+.++
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~~~~v~e~--- 287 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLDEDIVREA--- 287 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcccHHHHHHH---
Confidence 7889999999995 99988764 6789995 55689999999998 55556666655543 33443332 222221
Q ss_pred HHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 613 FFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 613 ~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
.+++...-++.+. |+-+.+.+.+.+++..
T Consensus 288 -----------~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 288 -----------QRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred -----------HHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 2223344445552 9999999999888764
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.05 Score=59.14 Aligned_cols=275 Identities=15% Similarity=0.186 Sum_probs=158.8
Q ss_pred CCCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+|..|.-- ..+.++++|...++|++..-=++-. .+.+|-. . ......=.-||.-+++|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE--E--------~NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE--E--------INRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH--H--------HHHHHHHHhhhhhcCChH
Confidence 4599999888643 3566789999999998765544311 1112110 0 001123345677778887
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
..++.+ ...|++ +.++.|+-|-+ |.-.+. . .+ +.+ ......
T Consensus 155 ~ar~nL--------------------l~EG~~--~~~IfvtGnt~iDal~~~--~---~~-------~~~----~~~~~~ 196 (383)
T COG0381 155 IARKNL--------------------LREGVP--EKRIFVTGNTVIDALLNT--R---DR-------VLE----DSKILA 196 (383)
T ss_pred HHHHHH--------------------HHcCCC--ccceEEeCChHHHHHHHH--H---hh-------hcc----chhhHH
Confidence 765421 112333 56788887743 211110 0 00 000 000000
Q ss_pred ccCCCCCCCCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH-HHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li-~~~~L~ 525 (696)
.+ .....++.++++.=|-... +++..+++++.++.++++++.++.--... ..+++.. +.++-.
T Consensus 197 ~~-~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 197 KG-LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred hh-hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 00 1112334556666665544 89999999999999888777666544322 2334444 455656
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
.+|.++. ++...+...++.. | .+++. ..|--.=||-..|+||++-+ ...-+|.++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6799986 7888888888885 5 33333 33556789999999999964 44456766443 445554 4678
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.+++.+++ ++++..++|+... ..|.=...++++.++..
T Consensus 330 ~i~~~~~~ll----~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~ 369 (383)
T COG0381 330 NILDAATELL----EDEEFYERMSNAK-----NPYGDGNASERIVEILL 369 (383)
T ss_pred HHHHHHHHHh----hChHHHHHHhccc-----CCCcCcchHHHHHHHHH
Confidence 8777776555 8998888886654 34444444555555443
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.024 Score=65.32 Aligned_cols=197 Identities=15% Similarity=0.086 Sum_probs=107.1
Q ss_pred CCCCeEEEEeC-CCchHHHHHHhhcCCC--cEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNY-SDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~-~~~~l~a~lla~~~gi--p~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||++++-+ ++.|+-.+..+++.|+ |+++.+-- +-+-|+.- +- +..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~--Ri---------kki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPK--RK---------TILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcc--hH---------HHHHHHhhhheec
Confidence 45999998654 5568866666677785 87765421 11222211 10 1234567888888
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC-CcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
=+-|.+ +|+. +| -++..|-+. +|.-...+.... .
T Consensus 369 fPFE~~-------------------~y~~-~g-----v~v~yVGHPL~d~i~~~~~~~~--------------------~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SP-----LRTVYLGHPLVETISSFSPNLS--------------------W 403 (608)
T ss_pred CccCHH-------------------HHHh-cC-----CCeEEECCcHHhhcccCCCHHH--------------------H
Confidence 777654 2221 22 234445433 343211121111 1
Q ss_pred ccccCCCCCCCCCEE-EEEcc-ccc-cCChHHHHHHHH--HhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 446 ~~~~g~l~~~~k~iI-l~vGR-L~~-~Kgi~~Llea~~--~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
++++|+ ++++++| +..|. -.+ .+.+..+++++. .+. ++.++++...... ..+.+.+.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCchh-----------hHHHHHHHHh
Confidence 233666 5455554 45553 333 456777888887 443 3577776433211 1234445454
Q ss_pred HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 521 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 521 ~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3321 0233331 112367778 599999765 99999999999999985
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.17 Score=56.78 Aligned_cols=97 Identities=13% Similarity=0.160 Sum_probs=57.3
Q ss_pred HHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhhcc
Q 005444 516 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 591 (696)
Q Consensus 516 ~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI~d 591 (696)
+++.+.+.-..+++.+. +.....|+..+++. +|++|-.-. -+.+=|++.|+|+|+-.. -|+.+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344455443 13345688889995 999985422 357889999999999643 3333333
Q ss_pred CCeEEEECC--CCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 592 GASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 592 g~~G~l~~p--~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
|...++++. -+.+++.+++.+++ +|.+.+++.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~ 399 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNAR 399 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHH
Confidence 223344443 35667777775555 776655443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.062 Score=62.97 Aligned_cols=144 Identities=14% Similarity=0.096 Sum_probs=92.1
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHH----HHHHHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~L----lea~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
..|+..+++...++++-|+...|..... ++-+.++++. ...+.+++.|...+ .|..-++.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 3455557888889999999999998883 3455555442 12367777776544 3445555666666655
Q ss_pred HH----cCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~----~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+. ..+.+ +|.|+. ..+ =.+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYd-vslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYD-VSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-S-HHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCc-HHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 43 23444 688986 233 3566666668999999875 89999999999999999999999999999854
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
..|+|+|-.
T Consensus 586 vG~eN~fiFG~ 596 (713)
T PF00343_consen 586 VGEENIFIFGL 596 (713)
T ss_dssp H-GGGSEEES-
T ss_pred cCCCcEEEcCC
Confidence 458888853
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.52 Score=53.91 Aligned_cols=77 Identities=10% Similarity=0.106 Sum_probs=45.7
Q ss_pred CcEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhcc-CCeEEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHI 598 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~d-g~~G~l~ 598 (696)
.+++..+ .++..++. ++ +++ ||.= +--++++||+.+|+|+|+-. ..-.+..+.+ -..|+-+
T Consensus 345 ~g~~v~~----w~PQ~~iL---~h-~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~ 412 (482)
T PLN03007 345 KGLIIRG----WAPQVLIL---DH-QATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSV 412 (482)
T ss_pred CCEEEec----CCCHHHHh---cc-Cccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEe
Confidence 4577766 55555544 43 444 6642 22468999999999999963 3334443322 1334433
Q ss_pred C----------CCCHHHHHHHHHHHH
Q 005444 599 D----------PYHPDQAAELMADFF 614 (696)
Q Consensus 599 ~----------p~d~e~la~~I~~~l 614 (696)
. .-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 413 GAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred ccccccccccCcccHHHHHHHHHHHh
Confidence 1 126778888887776
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0039 Score=60.77 Aligned_cols=108 Identities=20% Similarity=0.314 Sum_probs=60.9
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcC-CCcEEEE----ecCCCc-cCC-CCCCccHhhhhhhhhccchhhhh
Q 005444 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTI----AHALEK-TKY-PDSDIYWKKFDEKYHFSCQFTAD 353 (696)
Q Consensus 281 ~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~-gip~v~t----~H~l~~-~~~-~~s~~~~~~~~~~y~~~~~~~~e 353 (696)
+...+++. +..||||++|...+..+ .+..-+ ++|++.. .|+... ..+ ++... ......+...+-..-
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~---~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPP---SLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCC---CHHHHHHHHHHhHHH
Confidence 34444444 77899999998776332 233434 5665532 121111 011 11111 112222222233445
Q ss_pred HHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCC
Q 005444 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 418 (696)
Q Consensus 354 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f 418 (696)
..++..+|..|+.|...+. +.|. .+.+|+.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~---------------~fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRS---------------QFPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHH---------------hCCH---------HHHcCcEEeecccchhhc
Confidence 6788999999999988654 1232 236799999999999765
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.17 Score=54.28 Aligned_cols=127 Identities=11% Similarity=0.046 Sum_probs=88.6
Q ss_pred CEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 458 PIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 458 ~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+.-+-+|+ -++..+.-.+++++.+.. ..++++++-=+-++ ...+|++++.+.++++--.+++..+- +
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~---e 252 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT---E 252 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---h
Confidence 44444444 566777777777776533 35688776544432 13467888988888876566787765 4
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEE
Q 005444 537 RARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
.++.+|..++++. ||+.++.. +..|.|+ ++=.+.+|+||+.+.....-....+..--+++
T Consensus 253 ~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 253 FMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEe
Confidence 7889999999995 99999987 5789985 66689999999999666665555444333344
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.84 E-value=1.3 Score=50.51 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=48.2
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcc-hhhccCCeEEEECC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPA-EIIEHGASGFHIDP 600 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~-EiI~dg~~G~l~~p 600 (696)
+++.+.+ .++..++... . +.++||. -+--++++||+.+|+|+|+- |....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 5555554421 1 2445653 12235899999999999996 333444 34555566776641
Q ss_pred -------------CCHHHHHHHHHHHH
Q 005444 601 -------------YHPDQAAELMADFF 614 (696)
Q Consensus 601 -------------~d~e~la~~I~~~l 614 (696)
-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm 438 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLM 438 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHh
Confidence 26677888887766
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.80 E-value=1.4 Score=49.90 Aligned_cols=66 Identities=6% Similarity=0.028 Sum_probs=44.5
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEECC-----CCHHHHHHHHHHHHHhhhcCH-HHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGL 632 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~p-----~d~e~la~~I~~~l~~l~~dp-~~~~~m~~~a~ 632 (696)
-++++||+++|+|+|+- +.......+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.++++
T Consensus 339 ~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~ 414 (442)
T PLN02208 339 PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHT 414 (442)
T ss_pred chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 36899999999999996 44445555444 467887754 26678888887776 554 34555555554
Q ss_pred H
Q 005444 633 K 633 (696)
Q Consensus 633 ~ 633 (696)
+
T Consensus 415 ~ 415 (442)
T PLN02208 415 K 415 (442)
T ss_pred H
Confidence 3
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.71 E-value=1.4 Score=49.93 Aligned_cols=92 Identities=12% Similarity=0.146 Sum_probs=56.8
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC-
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 599 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~- 599 (696)
++....+ .++..++... . +.+.||.= +--++++||+++|+|+|+- |....+..+.+. +.|+.++
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 4555556 5666665542 1 13446642 2235899999999999996 444455555544 6787763
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 336788888887776 5553 334444443
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.043 Score=59.86 Aligned_cols=91 Identities=16% Similarity=0.099 Sum_probs=57.0
Q ss_pred CCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 457 KPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+.++.|.-.. .+.+..+++++.++.+.. ..+++.|.. . .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec--
Confidence 344555555331 355666778988887643 667776653 2 12334433322 2344443
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|..
T Consensus 228 -------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 -------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred -------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3466777 499988754 88888999999999985
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.59 E-value=1.9 Score=48.84 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=57.4
Q ss_pred CcEEEeccccccCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHI 598 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~ 598 (696)
+++.+.+ .++..++. ++ .. +||. -+-.++++||+++|+|+|+- +..-.+..+++. +.|+-+
T Consensus 317 ~~~~i~~----W~PQ~~iL---~H-~~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v 384 (449)
T PLN02173 317 DKSLVLK----WSPQLQVL---SN-KAIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRV 384 (449)
T ss_pred CceEEeC----CCCHHHHh---CC-CccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEE
Confidence 5677777 55555544 43 44 5553 23357999999999999996 444456666653 567766
Q ss_pred CCC------CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 599 DPY------HPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 599 ~p~------d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
... +.+++++++.+++ .+++ .+++.+++++
T Consensus 385 ~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 385 KAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred eecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 421 5688888888777 4543 2444444443
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.56 Score=50.40 Aligned_cols=133 Identities=15% Similarity=0.156 Sum_probs=76.3
Q ss_pred CCCCEEEEEccccccCChHHH---HHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 455 RSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~L---lea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
.+..+++++|.=. -|-+.+ ++|+..+....+ .-++|.|.... .+...++...-.-.++|...
T Consensus 218 E~~~Ilvs~GGG~--dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGGGA--DGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecCCCh--hhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 4466788888533 344333 333333333322 23566666655 33344444444445678888
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcch--hhc------cCCeEEEECCC--
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHIDPY-- 601 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~E--iI~------dg~~G~l~~p~-- 601 (696)
.+.. ++..+++ +|+..|.=+- =+|+.|-++.|+|.+.-..+-+.| .+. =|-..++ .|.
T Consensus 283 ~f~~------~~~~ll~-gA~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~l 350 (400)
T COG4671 283 EFRN------DFESLLA-GARLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENL 350 (400)
T ss_pred Ehhh------hHHHHHH-hhheeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccC
Confidence 7543 5777888 5888886532 368999999999999875554443 221 1222333 233
Q ss_pred CHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFF 614 (696)
Q Consensus 602 d~e~la~~I~~~l 614 (696)
.++.+|++|...+
T Consensus 351 t~~~La~al~~~l 363 (400)
T COG4671 351 TPQNLADALKAAL 363 (400)
T ss_pred ChHHHHHHHHhcc
Confidence 4667777775554
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.45 E-value=2.4 Score=48.41 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=64.8
Q ss_pred CcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
.++++.+ .++..++. ++ +.++||.= +--++++||+++|+|+|+- +..-.+..+.+ -+.|..+.
T Consensus 343 ~g~~v~~----w~PQ~~vL---~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~ 411 (477)
T PLN02863 343 RGLVIRG----WAPQVAIL---SHRAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVC 411 (477)
T ss_pred CCEEecC----CCCHHHHh---cCCCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEec
Confidence 3466666 55554544 33 25677752 3345899999999999995 44445555443 36787663
Q ss_pred C-----CCHHHHHHHHHHHHHhhhcCHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 005444 600 P-----YHPDQAAELMADFFGKCKENPSHWK---KISDGGLKRIYERYTWKIYSERLMTLAGVYG 656 (696)
Q Consensus 600 p-----~d~e~la~~I~~~l~~l~~dp~~~~---~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~ 656 (696)
. -+.+++++++.+++. ++++.++ ++++.+++-+.+.=|-....+++.+.+..+|
T Consensus 412 ~~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 412 EGADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred cCCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 2 256788888877652 3444332 2333333333333233334444444444443
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.29 E-value=2.8 Score=47.47 Aligned_cols=86 Identities=6% Similarity=0.016 Sum_probs=55.2
Q ss_pred cCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhc-cCCeEEEECC-----CCHH
Q 005444 537 RARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP-----YHPD 604 (696)
Q Consensus 537 ~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~-dg~~G~l~~p-----~d~e 604 (696)
.++..++.. + . +.||.= +--++++||+++|+|+|+- +..-.+..+. .-+.|..+.. -+.+
T Consensus 319 w~PQ~~vL~---h-~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 390 (446)
T PLN00414 319 WVEQPLILS---H-PSVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKE 390 (446)
T ss_pred cCCHHHHhc---C-CccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHH
Confidence 455555543 2 4 557742 3346899999999999996 3444555664 4567877742 3678
Q ss_pred HHHHHHHHHHHhhhcCH-HHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENP-SHWKKISDGGLKR 634 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp-~~~~~m~~~a~~~ 634 (696)
++++++.+++ .++ +..+++.+++++.
T Consensus 391 ~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 391 SLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 8888887776 454 4455565655544
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.27 E-value=2.9 Score=47.47 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=46.3
Q ss_pred cCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEECC------CCH
Q 005444 537 RARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 603 (696)
Q Consensus 537 ~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~p------~d~ 603 (696)
.++..++ +++ + ++||.= +--++++||+.+|+|+|+- +..-.+..+.+ -+.|..++. -+.
T Consensus 331 w~PQ~~i---L~h-~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKI---LSH-MAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHH---hcC-cCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 5555554 443 4 366642 2224899999999999996 44445556655 468877742 367
Q ss_pred HHHHHHHHHHH
Q 005444 604 DQAAELMADFF 614 (696)
Q Consensus 604 e~la~~I~~~l 614 (696)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88888887776
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.29 Score=52.58 Aligned_cols=109 Identities=15% Similarity=0.107 Sum_probs=67.1
Q ss_pred CCCCEEEEEccccccCCh--H---HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 005444 455 RSKPIVFSMARLDHVKNM--T---GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 528 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi--~---~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V- 528 (696)
+.+.+.+.+|.=.+.-.+ + .|++.+..+.+..+ ..+.|..+-..+ .+..+.|.+.. +-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~---~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELL---KDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhh---cCCCceE
Confidence 455667788875443322 2 45666666655544 788888876652 11233333333 334566
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG 584 (696)
.|-+. ..+=+..+|+. ||.++++.. .-.-+.||.++|+||..-...+
T Consensus 213 ~~~~~-----~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDGT-----GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecCC-----CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 55331 22236678884 999999843 2334789999999999987776
|
The function of this family is unknown. |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.016 Score=49.54 Aligned_cols=71 Identities=17% Similarity=0.097 Sum_probs=50.7
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCch--HHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~--l~a~lla~~~gip~v~t~ 322 (696)
.+.++..+|+... .+....|.+.....-+...+. +++.||||+|.+.++ .-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4689999998653 234556665544433333333 349999999998764 467888999999999999
Q ss_pred cCCC
Q 005444 323 HALE 326 (696)
Q Consensus 323 H~l~ 326 (696)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9873
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.52 Score=56.06 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=108.2
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc----CC--
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY----KL-- 524 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~----~L-- 524 (696)
.++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+... ...+-......+...+++. +-
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v~~~k~~v~~~v~rIn~~f~~~~ 350 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEVEELKFCVSVHVRRINEKFGSAS 350 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHHHHHHHHhHhhhhhhhhccCCcc
Confidence 477899999999999999888888877765554 5667776655441 1111111122233333222 11
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCCCCcchhhccCCeEEEECC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHIDP 600 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVvat~~gG~~EiI~dg~~G~l~~p 600 (696)
...|+++- ..++..++.++++ .+|+++..++-+|..++.+|+..|. .+.|.+..-|..+..++ ...+++|
T Consensus 351 ~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnp 424 (732)
T KOG1050|consen 351 YQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNP 424 (732)
T ss_pred cceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECC
Confidence 12344332 4678889999999 5999999999999999999999885 77888888888887644 4678999
Q ss_pred CCHHHHHHHHHHHHH
Q 005444 601 YHPDQAAELMADFFG 615 (696)
Q Consensus 601 ~d~e~la~~I~~~l~ 615 (696)
.|.++++..|..++.
T Consensus 425 w~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 425 WDGDEFAILISKALT 439 (732)
T ss_pred cchHHHHHHHHHHhh
Confidence 999999999988773
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.15 Score=53.13 Aligned_cols=140 Identities=17% Similarity=0.257 Sum_probs=80.9
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
.+-+++++|.=|+ ||++ .+.++.+.+. ++++-||-+..+| ....+.+.+++ .+++.+.-
T Consensus 158 ~r~ilI~lGGsDp-k~lt--~kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~---~~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLT--LKVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEK---YPNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhH--HHHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhh---CCCeeeEe---
Confidence 4457888887555 6665 3445555443 3676555443221 14455555554 45787764
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCCCCcchhhcc----CCeEEEECCCCHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GASGFHIDPYHPDQAA 607 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVva----t~~gG~~EiI~d----g~~G~l~~p~d~e~la 607 (696)
..+++.+++.+ ||..+.. -|.|+.||...|+|.++ .+.-..+..... ...|++. ......
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 35578999996 8887753 38999999999999333 232222222211 2345553 234444
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
..+.+ +..|+..+..++..++
T Consensus 285 ~~~~~----i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQ----IQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHHH----hhhCHHHhhhhhhccc
Confidence 44533 3378887776665443
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.68 E-value=2.4 Score=45.02 Aligned_cols=111 Identities=12% Similarity=0.123 Sum_probs=64.1
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 547 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 547 (696)
..++++.+.+++..+++.. .|++-.. ++.++..+.+. ++.... -.. +-..++
T Consensus 199 g~~~~~~~~~li~~l~k~g----iV~ipr~---------------~~~~eife~~~---n~i~pk-----~~v-D~l~Ll 250 (346)
T COG1817 199 GDRGISVLPDLIKELKKYG----IVLIPRE---------------KEQAEIFEGYR---NIIIPK-----KAV-DTLSLL 250 (346)
T ss_pred cccchhhHHHHHHHHHhCc----EEEecCc---------------hhHHHHHhhhc---cccCCc-----ccc-cHHHHH
Confidence 4677777888888886542 4444322 22344444442 122211 111 212233
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC---CcchhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 548 a~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g---G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.- |++++ .+-|.-.-||...|+|.|.+.-| +.-+... ..|.++..+|+.+..+...+.+
T Consensus 251 yy-a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 251 YY-ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hh-hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 32 55666 35566678999999999998633 3444443 3688888888887766665544
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.00055 Score=66.32 Aligned_cols=91 Identities=16% Similarity=0.258 Sum_probs=57.1
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 597 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l 597 (696)
.+|.+.++.. ++..+|+. ||+.|.- +-+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789988543 37788884 9998873 44689999999999998876555 3333434444554
Q ss_pred ECCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 598 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 598 ~~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
+... +++.+.++|. .+..++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~----~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIE----ELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHH----CHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHH----HHHcCcHHHHHHHHHH
Confidence 4332 3566777774 4558888777666554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=95.37 E-value=2 Score=44.79 Aligned_cols=145 Identities=15% Similarity=0.079 Sum_probs=80.7
Q ss_pred CCCCCEE---EEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH-----------H
Q 005444 454 DRSKPIV---FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL-----------M 519 (696)
Q Consensus 454 ~~~k~iI---l~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l-----------i 519 (696)
+..+... .|+||..-.||+..+++.-++..+. +...-++-|-...+ +.+. +.+. +
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~-i~d~~~~~~y~~~~~~ 245 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKIS-IKDHGIPYEYYPKLDC 245 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHH-HHHTT--EEEE-CTGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceee-eecCCcccccCccccc
Confidence 3344444 7999999999999999988876544 67777777744331 0011 1111 0
Q ss_pred HHcCC--CCcEEEeccccccCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCCCCcch---
Q 005444 520 KTYKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE--- 587 (696)
Q Consensus 520 ~~~~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVvat~~gG~~E--- 587 (696)
.+..+ ...+-.+| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|....
T Consensus 246 ~~~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~ 320 (355)
T PF11440_consen 246 DEPKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTL 320 (355)
T ss_dssp GG---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TT
T ss_pred cCcccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeee
Confidence 11111 23466676 6778899999996 666665542 3557788999999995 777765554433
Q ss_pred ----hhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 588 ----IIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 588 ----iI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.+.+.-+.+.+|-+|.++..++|.++-
T Consensus 321 D~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 321 DGTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp TSSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred cCceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 233344677899999999999987653
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.34 E-value=1.5 Score=45.38 Aligned_cols=112 Identities=10% Similarity=0.027 Sum_probs=67.8
Q ss_pred CCCCCEEEEEccccccCCh--HHHH---HHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 005444 454 DRSKPIVFSMARLDHVKNM--TGLV---ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 527 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi--~~Ll---ea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~ 527 (696)
.+..++-+++|.-.+.-.. +.+. .++-+..+. ....|++--+-.. -+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 4566788889876654444 2222 232222221 3467777766554 2455666655 555556
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
+.|-+.-++..| ...+++ +||.++.+...-. -.-||.+.|+||++-.-.+.
T Consensus 226 i~w~~~d~g~NP---Y~~~La-~Adyii~TaDSin---M~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYNP---YIDMLA-AADYIISTADSIN---MCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCCc---hHHHHh-hcceEEEecchhh---hhHHHhccCCCeEEEecCCc
Confidence 788774333222 456777 5999999865322 35799999999998755544
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.48 Score=51.94 Aligned_cols=131 Identities=11% Similarity=0.151 Sum_probs=64.8
Q ss_pred cCCCCCCCCCEEEEEccccccCCh------HHH--HHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi------~~L--lea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
+|+ +.++.+|+|+=........ ... .+.+.. ...+++.|++-.-... .....
T Consensus 186 ~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~~----------------~~~~~ 245 (369)
T PF04464_consen 186 LGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPNM----------------KKKFK 245 (369)
T ss_dssp TT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHHH----------------HTT--
T ss_pred hcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCchh----------------hhchh
Confidence 555 6677799999665443222 111 222222 2236787776653221 11111
Q ss_pred H-cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc--CC-------CCcchhhc
Q 005444 521 T-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEIIE 590 (696)
Q Consensus 521 ~-~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat--~~-------gG~~EiI~ 590 (696)
. ....++|.++. +..+++.++.. +|++|. -++-++.|++.+++|||-- +. |...+ ..
T Consensus 246 ~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~ 312 (369)
T PF04464_consen 246 DFKEDNSNIIFVS------DNEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YE 312 (369)
T ss_dssp --TT-TTTEEE-T------T-S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TT
T ss_pred hhhccCCcEEECC------CCCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hH
Confidence 1 34456788765 13368888884 999994 5677899999999999954 33 22223 22
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
+...|-.+. +.+++.++|.+++
T Consensus 313 ~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 313 EDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TSSSS-EES--SHHHHHHHHTTHH
T ss_pred hhCCCceeC--CHHHHHHHHHhhh
Confidence 333455554 8899999986665
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.73 E-value=22 Score=40.68 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=49.9
Q ss_pred cEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhh-ccCCeEEEEC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHID 599 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI-~dg~~G~l~~ 599 (696)
.+.+.+ .++..++.. + ..+ ||. -+--++++||+.+|+|+|+- +.......+ +.-+.|..++
T Consensus 339 g~vv~~----W~PQ~~iL~---h-~~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 406 (481)
T PLN02992 339 GFVVPS----WAPQAEILA---H-QAVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD 406 (481)
T ss_pred CEEEee----cCCHHHHhC---C-cccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec
Confidence 466666 555555444 2 333 553 23346899999999999997 444455565 3556787775
Q ss_pred C----CCHHHHHHHHHHHH
Q 005444 600 P----YHPDQAAELMADFF 614 (696)
Q Consensus 600 p----~d~e~la~~I~~~l 614 (696)
. -+.++++++|.+++
T Consensus 407 ~~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 407 DPKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCCcccHHHHHHHHHHHh
Confidence 3 36778888887776
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=91.96 E-value=4.7 Score=45.71 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=57.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
.+++...+ .++..++... . +.++||. -+--++++||+.+|+|+|+- |....+..+.+ -+.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35676666 5665565542 1 1334553 23346899999999999986 44555666654 35677776
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKK 626 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~ 626 (696)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 567888999997776 67665543
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.48 Score=54.10 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=72.8
Q ss_pred CCCEEEEEccccccCChH----HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 456 SKPIVFSMARLDHVKNMT----GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~----~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
+..++++.|.+.. ...+ .++++++++ |. +++..-++.. .. .+++++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEEe
Confidence 4457888898763 2233 344444433 44 5666554422 00 123467666
Q ss_pred ccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhccCCeEEEECCC--CHH
Q 005444 532 AAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPD 604 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~dg~~G~l~~p~--d~e 604 (696)
. .+|..++ +++ ..++||. =|--+++.||+.+|+|+|+-. ....+..+++.+.|..++.. +.+
T Consensus 329 ~----W~PQ~~l---L~hp~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~ 397 (500)
T PF00201_consen 329 K----WLPQNDL---LAHPRVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEE 397 (500)
T ss_dssp S----S--HHHH---HTSTTEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHH
T ss_pred c----cccchhh---hhcccceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHH
Confidence 5 5665554 443 1345663 234568999999999999974 34456666677788888755 456
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m 627 (696)
++.++|.+++ +|+.+.+..
T Consensus 398 ~l~~ai~~vl----~~~~y~~~a 416 (500)
T PF00201_consen 398 ELRAAIREVL----ENPSYKENA 416 (500)
T ss_dssp HHHHHHHHHH----HSHHHHHHH
T ss_pred HHHHHHHHHH----hhhHHHHHH
Confidence 7777776665 788766443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=91.01 E-value=1.6 Score=45.80 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=63.3
Q ss_pred EEEEEccccccCC--hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 459 IVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 459 iIl~vGRL~~~Kg--i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 4445554444443 45677777777654 788999987644 334444454443233355666
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. +|++|.+ ++ | .+--|.+.|+|+|+-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~---Ds-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTN---DS-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEee---CC-H-HHHHHHHcCCCEEEE
Confidence 5568899999996 9999987 32 3 344456999999985
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=90.79 E-value=9.5 Score=43.54 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=53.4
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECC------CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP------YHPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p------~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
-++++||+++|+|+|+- +....+..+++-+.|..++. -+.++++++|.+++ .+++ -.++.+++++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~ 441 (472)
T PLN02670 367 WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKE 441 (472)
T ss_pred cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHH
Confidence 46899999999999996 44455666666778887753 24788888887776 5541 1223333333
Q ss_pred ---HHHHhCCHHHHHHHHHHHHH
Q 005444 634 ---RIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 634 ---~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.++=+-..+++.+.+.+.
T Consensus 442 l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 442 MRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred HHHHHhCcchhHHHHHHHHHHHH
Confidence 23344445555666555443
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=90.40 E-value=15 Score=38.34 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=68.6
Q ss_pred CCCCCEEEEEcccccc-------CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 005444 454 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 525 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~-------Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~ 525 (696)
..++++|++...+... .+...+++.+..+.+..|+++++|-= .|......+ . ....+. +..
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcCC
Confidence 5678888888887654 23445666666666666788876544 332111111 0 222222 333
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
+ +.++. +...++.++.. +|.++.- -+.+-+||+..|+||++-...-. ...|+..+....+
T Consensus 183 ~-~~~~~------~~~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~ 242 (269)
T PF05159_consen 183 N-VVIID------DDVNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDE 242 (269)
T ss_pred C-eEEEC------CCCCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEecCccc------CCCCccCcCCchh
Confidence 3 44442 12346777775 6666542 25788999999999999643332 2256665554433
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=89.05 E-value=1.4 Score=49.89 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=63.6
Q ss_pred HHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhc
Q 005444 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHG 433 (696)
Q Consensus 354 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~ 433 (696)
......+|.+++.|+..+...+..+ ..++ ..++.+.++++|.+.+.+.-.....
T Consensus 204 ~e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~------ 257 (495)
T KOG0853|consen 204 EETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQYESHL------ 257 (495)
T ss_pred hhhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhccccccccch------
Confidence 3456788999999987654322221 1233 4458899999998877652111100
Q ss_pred chhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC
Q 005444 434 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE 487 (696)
Q Consensus 434 ~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~ 487 (696)
.-....+...|. ...+..+..+.|+.+.||++.+++++.++...-+
T Consensus 258 ------~~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~ 303 (495)
T KOG0853|consen 258 ------ELRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIP 303 (495)
T ss_pred ------hcccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccC
Confidence 001112223444 4457788999999999999999999988876543
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=88.90 E-value=10 Score=42.97 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=54.9
Q ss_pred cEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
++...+ .++..+ ++++ +++ ||. -+--++++||+++|+|+|+- +....+..+.+ -+.|..++
T Consensus 335 g~~v~~----W~PQ~~---iL~H-~~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 402 (451)
T PLN03004 335 GMVVKS----WAPQVP---VLNH-KAVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN 402 (451)
T ss_pred cEEEEe----eCCHHH---HhCC-CccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec
Confidence 466665 455555 4443 666 553 23346899999999999996 55556666654 36888775
Q ss_pred C-----CCHHHHHHHHHHHHHhhhcCHHHHH
Q 005444 600 P-----YHPDQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 600 p-----~d~e~la~~I~~~l~~l~~dp~~~~ 625 (696)
. -+.++++++|.+++ .|+++++
T Consensus 403 ~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 403 ESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred CCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 3 26788888887776 5655443
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=88.80 E-value=42 Score=37.08 Aligned_cols=88 Identities=16% Similarity=0.254 Sum_probs=54.5
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC-cchhhcc-CCeEE--EECCC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH-GASGF--HIDPY 601 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG-~~EiI~d-g~~G~--l~~p~ 601 (696)
.+|.+.- +.. ..++-..++. +|++|-.-. -+++=||+.|+|+|+=.+.. ...+.++ |..|+ .+.|.
T Consensus 266 ~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 5677664 222 3566668884 888884322 35788999999999964333 2223322 33444 35567
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKK 626 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~ 626 (696)
|.+.+.+...+.+. .+++.+++
T Consensus 336 ~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred chHHHHHHHHHHHh---ccHHHHhh
Confidence 88888888877763 45554443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=87.84 E-value=9.8 Score=43.51 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=58.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~ 599 (696)
.+++...+ .++..++... . +.++||.= +--++++||+.+|+|+|+- +.......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45566666 5565555532 1 35666642 3346899999999999996 344455555554 6787772
Q ss_pred -----C--CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHH
Q 005444 600 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 600 -----p--~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
. -+.++++++|.+++ .++ ..++|.+++++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHHH
Confidence 1 14678888887776 443 234555555443
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=87.84 E-value=56 Score=37.32 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=34.0
Q ss_pred cHHHHHHHHcCCcEEEcC----CCCcchhh-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHID------PYHPDQAAELMADFF 614 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~----~gG~~EiI-~dg~~G~l~~------p~d~e~la~~I~~~l 614 (696)
-++++||+++|+|+|+-. ..-.+..+ +.-+.|.-+. .-..++++++|..++
T Consensus 363 wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 363 WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 358999999999999963 33344444 3345666653 125677788887766
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=87.51 E-value=5.6 Score=43.33 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=65.1
Q ss_pred CCCEEEEEccccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++ .+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~e---~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------DD---LACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------HH---HHHHHHHHHhcCCCccccccC-
Confidence 355667777655666644 56666666643 3578888886533 11 222333443333233455677
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. +++||.. ++- .+-=|-|.|+|+|+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~n---DSG--p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGV---DSA--PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEec---CCH--HHHHHHHcCCCEEEE
Confidence 6778999999995 9999976 332 345577899999985
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=87.43 E-value=3.7 Score=42.01 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=60.3
Q ss_pred CCCCEEEEEccccccCChHH--HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 455 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~--Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+++.+++..|.=.+.|.... ..+.+..+.+.+ .+++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44556777777667776554 777777776543 78888887643 11222333333322 12577877
Q ss_pred cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 533 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..++..+++. +|++|.+ ++. .+-=|.+.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dtg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DTG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SSH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CCh--HHHHHHHHhCCEEEE
Confidence 6778999999995 9999987 333 356688999999996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=86.09 E-value=13 Score=42.31 Aligned_cols=141 Identities=17% Similarity=0.201 Sum_probs=71.8
Q ss_pred CCCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+..+.++.|.+.. .+.+..++.++..+. .--|.++.+......+.+.++...........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----CCeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 4567778887653 455566666666553 2223334432110000000000000001122222 234555556
Q ss_pred ccccCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC-----CC
Q 005444 534 QTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----PY 601 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~-----p~ 601 (696)
.++..++ +++ .. +||. -+-.++++||+.+|+|+|+- +....+..+.+. +.|+-+. .-
T Consensus 334 ---W~PQ~~i---L~h-~~vg~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 334 ---WCSQIEV---LRH-RAVGCFVT----HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred ---eCCHHHH---hCC-cccceEEe----eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 5554454 443 44 3553 23346899999999999996 444455555442 3455442 12
Q ss_pred CHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFF 614 (696)
Q Consensus 602 d~e~la~~I~~~l 614 (696)
+.+++++++.+++
T Consensus 403 ~~e~l~~av~~vm 415 (455)
T PLN02152 403 ERGEIRRCLEAVM 415 (455)
T ss_pred cHHHHHHHHHHHH
Confidence 6788888888776
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=85.49 E-value=4.2 Score=39.38 Aligned_cols=111 Identities=10% Similarity=0.057 Sum_probs=59.1
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
...+|+|++.+... +-+..+.....++|.++.+|.... .||.+...-.++...+ ......-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~~~~-------~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQYGM-------NNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccccHHH-------HHHHHHHhceeeeecch
Confidence 34689999776432 333344444567999999997532 3444332222222111 12345668999999998
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCC
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 413 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv 413 (696)
...+..-+.+.++-+. ||.... ..-.+...+|..|+|.|+
T Consensus 129 ~nr~sFL~~~~~fL~~----~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 129 FNRDSFLDGIPSFLKR----MPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hhHHHHHHHHHHHHHH----CCCCCc-hhHHHHHhccCeecCCCC
Confidence 7766544444444322 222111 001112245777777764
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.65 E-value=25 Score=40.22 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=47.5
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcch-hhccCCeEEEECC-
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAE-IIEHGASGFHIDP- 600 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~E-iI~dg~~G~l~~p- 600 (696)
+....+ .++..++...= +.+.||.= +--++++||+++|+|+|+- +..-.+. +++.-+.|+.+..
T Consensus 341 rg~v~~----w~PQ~~iL~h~--~vg~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 410 (475)
T PLN02167 341 RGLVCG----WAPQVEILAHK--AIGGFVSH----CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLD 410 (475)
T ss_pred Ceeeec----cCCHHHHhcCc--ccCeEEee----CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecc
Confidence 344455 55555544311 14556642 2234899999999999996 3333443 3445567877642
Q ss_pred --------CCHHHHHHHHHHHH
Q 005444 601 --------YHPDQAAELMADFF 614 (696)
Q Consensus 601 --------~d~e~la~~I~~~l 614 (696)
-+.++++++|.+++
T Consensus 411 ~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 411 YVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred cccccCCcccHHHHHHHHHHHh
Confidence 25778888887776
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=84.63 E-value=8.7 Score=41.35 Aligned_cols=100 Identities=16% Similarity=0.073 Sum_probs=62.6
Q ss_pred CCC-EEEEEcc-ccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 456 SKP-IVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 456 ~k~-iIl~vGR-L~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 344 4455554 34566554 56666666654 2478899987644 233333333322 1223466
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
| ..+..++..+++. +|++|.. ++- .+-=|.|.|+|+|+=
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~---DSG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTN---DSG--LMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEee---CCH--HHHHHHHcCCCEEEE
Confidence 6 6778999999995 9999976 332 345678999999984
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=84.14 E-value=2.9 Score=36.66 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=57.4
Q ss_pred EEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhH--HHHHHHccccEEEeCCCCCCCc---H
Q 005444 491 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 565 (696)
Q Consensus 491 LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fG---l 565 (696)
++|||+-.+ ....+++.++++|.. +.+.|... ...... +...+.. +|++|++..+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888333 256788899998864 44444322 233334 8888885 99999987654433 3
Q ss_pred HHHHHHHcCCcEEEcCCCCcchhh
Q 005444 566 TVVEAMTCGLPTFATCHGGPAEII 589 (696)
Q Consensus 566 tvlEAMa~GlPVvat~~gG~~EiI 589 (696)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456788899999999877766554
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=83.40 E-value=48 Score=37.67 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=52.8
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhcc-CCeEEEECC-----CCHHHH
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP-----YHPDQA 606 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~d-g~~G~l~~p-----~d~e~l 606 (696)
.++..++... . +.++||.= +--++++||+.+|+|+|+-. ....+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5555565542 1 24557742 33568999999999999964 3345555543 456776532 267888
Q ss_pred HHHHHHHHHhhhcCH-HHHHHHHHHHH
Q 005444 607 AELMADFFGKCKENP-SHWKKISDGGL 632 (696)
Q Consensus 607 a~~I~~~l~~l~~dp-~~~~~m~~~a~ 632 (696)
.+++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88887776 554 33444444444
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=82.68 E-value=49 Score=34.94 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=51.4
Q ss_pred hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccc
Q 005444 472 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 551 (696)
Q Consensus 472 i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aa 551 (696)
+..+++++..+.+.. +.+++++.-... .| .+..+++.+.+.-...| +. ..+..|+...++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456677777665432 456655553321 11 22334444444323333 22 4567899999995 9
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 552 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 552 dvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
+++|--.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 98885433 3578899999999975
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.84 E-value=31 Score=39.45 Aligned_cols=66 Identities=9% Similarity=0.030 Sum_probs=42.9
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhh-ccCCeEEEECC-------CCHHHHHHHHHHHHHhhhcCHH-HHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFFGKCKENPS-HWKKISDG 630 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI-~dg~~G~l~~p-------~d~e~la~~I~~~l~~l~~dp~-~~~~m~~~ 630 (696)
-++++||+++|+|+|+- +..-....+ +.-+.|+.++. -+.++++++|.+++ .+++ ..+++.++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~ 442 (480)
T PLN00164 367 WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREK 442 (480)
T ss_pred cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHH
Confidence 35899999999999995 444455544 33467877642 25678888887776 5543 24444444
Q ss_pred HHH
Q 005444 631 GLK 633 (696)
Q Consensus 631 a~~ 633 (696)
+.+
T Consensus 443 a~~ 445 (480)
T PLN00164 443 AAE 445 (480)
T ss_pred HHH
Confidence 443
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=81.46 E-value=14 Score=40.03 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=63.0
Q ss_pred CCEEEEEccccccCCh--HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 457 KPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi--~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
..+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 3455666654455544 455555555543 3578899986532 11222333333333223345677
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. ++++|.. ++ -.+-=|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~---DS--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGV---DS--VPMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CC--HHHHHHHHcCCCEEEE
Confidence 7788999999996 9999976 33 2455688999999984
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=80.61 E-value=17 Score=38.71 Aligned_cols=99 Identities=15% Similarity=0.030 Sum_probs=63.5
Q ss_pred CCCEEEEEccccccCCh--HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi--~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.+++..|.=.+.|.. +...+.+..+.+. +.+++++|++++ +.+...++.+..+ + ..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~--~-~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP--G-AVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC--C-CeecC-
Confidence 44566677754566665 3566666666542 578888866543 1233344444332 2 35666
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..++..+++. |+++|.. ++- .+-=|-+.|+|+|+=
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~---DSg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGV---DTG--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeC---CCh--HHHHHHHcCCCEEEE
Confidence 6778999999995 9999986 332 344577889999985
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 696 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 1e-42 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-05 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 2e-05 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 8e-04 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 696 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 0.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 7e-23 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-172 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-48 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 7e-25 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 3e-24 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 2e-20 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 1e-19 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 6e-17 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 3e-15 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 5e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-11 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 2e-12 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 8e-09 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 2e-08 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 1e-06 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 783 bits (2023), Expect = 0.0
Identities = 448/645 (69%), Positives = 538/645 (83%), Gaps = 4/645 (0%)
Query: 53 NIFGDDEGRQNLRDGPFSEVIK-SAQLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPF 111
+F D E L F + + LML+++IQ+++ LQ +L KAE++L++L +T +
Sbjct: 169 KLFHDKESLLPLLK--FLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLY 226
Query: 112 SQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSP 171
+FE + +G E+GWGD AE VL+M+ LLLD+L+APDP TLE FLGR+PMVFNVVILSP
Sbjct: 227 EEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSP 286
Query: 172 HGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKG 231
HGYF Q NVLG PDTGGQVVYILDQVRALE EML RIK+QGL+I P+ILI+TRL+PDA G
Sbjct: 287 HGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG 346
Query: 232 TTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 291
TTC +RLERV +E+ ILRVPFR+EKGI+R+WISRF+VWPYLET+TED E++ EL G
Sbjct: 347 TTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNG 406
Query: 292 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFT 351
PD IIGNYSDGNLVASLLA+K+G+TQCTIAHALEKTKYPDSDIYWKK D+KYHFSCQFT
Sbjct: 407 KPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFT 466
Query: 352 ADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 411
AD+ AMN+ DFIITST+QEIAG+K TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP
Sbjct: 467 ADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 526
Query: 412 GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKN 471
GADM IYFPY+E+++RLT H IE+LL+ +N EH+ L D+ KPI+F+MARLD VKN
Sbjct: 527 GADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKN 586
Query: 472 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531
++GLVE YGKN++LREL NLVVV G +SKD EE AE++KM++L++ YKL+GQFRWI
Sbjct: 587 LSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645
Query: 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591
++Q +R RNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII H
Sbjct: 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVH 705
Query: 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
G SGFHIDPYH DQAA+ +ADFF KCKE+PSHW +IS GGL+RI E+YTW+IYS+RL+TL
Sbjct: 706 GKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTL 765
Query: 652 AGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQH 696
GVYGFWK+VS L+R E RRYLEMFY LK+R L ++VPLA ++
Sbjct: 766 TGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDDVE 810
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 7e-23
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 2 AAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGR 61
A ++R+ S RER+ +TL RNE+++LLSR A+GKGILQ + +I E + + ++ R
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PEQTR 61
Query: 62 QNLRDGPFSEVIKSAQ 77
+ L GPF +++KS Q
Sbjct: 62 KKLEGGPFFDLLKSTQ 77
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 500 bits (1288), Expect = e-172
Identities = 136/537 (25%), Positives = 225/537 (41%), Gaps = 66/537 (12%)
Query: 157 LGRLPMVFNVVILSPHGYFGQANVLGL--PDTGGQVVYILDQVRALENEMLLRIKRQGLD 214
+ + + +V L+P G F A+ PD GGQ+VY+ + AL G+
Sbjct: 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALA--------EMGVQ 52
Query: 215 ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL 274
+ I+TR I D + ++ T I+R+PF +K ++ + ++WPYL
Sbjct: 53 VD----IITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYL 103
Query: 275 ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSD 334
+ + + E FP + +Y DG L LL G+ H+L K +
Sbjct: 104 HEYVNKIINFY-REEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 335 IY---WKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG 391
+ +K+ DE++ F + A+ + M+ AD II ST QE G QY
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG------QYS-------HD 209
Query: 392 LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451
LYR ++ D KF+++ PG + ++ + + + +E+ L
Sbjct: 210 LYRGAVNVED-DDKFSVIPPGVNTRVFDGEYGDKIK-AKITKYLERDLGSE--------- 258
Query: 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVN----KSKDRE 507
P + + +RLD KN GLVE Y +N +L++ NLV+ I+ +E
Sbjct: 259 --RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316
Query: 508 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTV 567
E + K+ EL+ G+ + + Y Y+A F +FYE FGL
Sbjct: 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELA-GCYAYLASKGSVFALTSFYEPFGLAP 375
Query: 568 VEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 627
VEAM GLP T +GGPAEI++ G G +DP P+ A + F E+ W
Sbjct: 376 VEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAY 431
Query: 628 SDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL 684
+ G +R+ ERYTW+ + + + +R++ I +
Sbjct: 432 QEKGKQRVEERYTWQETARGYLEV--------IQEIADRKDEEDEGGSLNIPDYFTN 480
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 3e-48
Identities = 90/491 (18%), Positives = 171/491 (34%), Gaps = 89/491 (18%)
Query: 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKIL 220
M V ++S H G D+GG VYIL L +QG+++
Sbjct: 20 HM--RVAMISMHTS--PLQQPGTGDSGGMNVYILSTATEL--------AKQGIEVD---- 63
Query: 221 IVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 280
I TR ++G E V E+ ++ + + +S+ ++ L FT
Sbjct: 64 IYTRATRPSQG-------EIVRVAENLRVINIAAGP-----YEGLSKEELPTQLAAFTGG 111
Query: 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKF 340
+ S + D I +Y V LL I AH L K ++
Sbjct: 112 MLSFT-RREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-----YRDD 165
Query: 341 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400
+ + + ++NAD + +T +E+ ++H D
Sbjct: 166 SDTPESEARRICEQQLVDNADVLAVNTQEEMQ---------------------DLMHHYD 204
Query: 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIV 460
+ ++VSPGAD+++Y P +++ S +L +V
Sbjct: 205 ADPDRISVVSPGADVELYSPGNDRATE-----RSRRELGIPLH-------------TKVV 246
Query: 461 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520
+ RL K L++ NL V+ + + + +
Sbjct: 247 AFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTY------RHMAE 300
Query: 521 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580
++ + R++ + +YR AD P+F E+FGL +EA G P A
Sbjct: 301 ELGVEKRIRFLDPRPPSELV-AVYR-AAD---IVAVPSFNESFGLVAMEAQASGTPVIAA 355
Query: 581 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640
GG + G +G +D + P A+ +A ++ ++ + ++ ++
Sbjct: 356 RVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHA-RTFS 410
Query: 641 WKIYSERLMTL 651
W + +L +L
Sbjct: 411 WAATAAQLSSL 421
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 7e-25
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 35/249 (14%)
Query: 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 464
K I+ P D KQ + + +E+ DPE KPI+ ++
Sbjct: 195 KAVIMPPSIDPLSEKNVELKQTEILRI---LERFDVDPE-------------KPIITQVS 238
Query: 465 RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEI--EKMHELMKTY 522
R D K + ++E Y K + V L++V + D E + + ++ + Y
Sbjct: 239 RFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGV-----MAHDDPEGWIYFEKTLRKIGEDY 293
Query: 523 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 582
+ I R +D +Q + E FGLTV EAM G P
Sbjct: 294 DVKVLTNLIGVHAREVN--AFQR-ASD---VILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 583 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642
GG I G +GF + ++A E++ ++P K++ +R+ + +
Sbjct: 348 GGIKFQIVDGETGFLVRD--ANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKNFIIT 401
Query: 643 IYSERLMTL 651
+ ER + +
Sbjct: 402 KHMERYLDI 410
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 77/463 (16%), Positives = 155/463 (33%), Gaps = 118/463 (25%)
Query: 184 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243
P GG V + + L +G +I +T +P RL +V
Sbjct: 24 PSVGGSGVVGTELGKQL--------AERGHEIH----FITSGLPF--------RLNKVY- 62
Query: 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 303
+ + V S F PY + +E+ D + +Y+
Sbjct: 63 -PNIYFHEVTVNQ--------YSVFQYPPYDLALASKM-AEVAQREN--LDILHVHYAIP 110
Query: 304 NLVASLLAYKMGITQCTI---AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 360
+ + + LA +M + I H +DI D + +F +
Sbjct: 111 HAICAYLAKQMIGERIKIVTTLHG--------TDITVLGSDPSLNNLIRFGI-----EQS 157
Query: 361 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 420
D + V L H + + V D +YF
Sbjct: 158 DVVTA------------VSHS----------LINETHELVKPNKDIQTVYNFIDERVYFK 195
Query: 421 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 480
Q + ++ + I+ ++ VK + +V+ +
Sbjct: 196 RDMTQLK--------KEYGISES-------------EKILIHISNFRKVKRVQDVVQAF- 233
Query: 481 KNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR 539
+++ V+ +++ G D E I +L+K ++ + ++ Q N A
Sbjct: 234 --AKIVTEVDAKLLLVG--------DGPEFCTIL---QLVKNLHIEDRVLFLGKQDNVA- 279
Query: 540 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 599
EL ++D + + E+FGL ++EAM CG+P T GG E+I+HG +G+ +
Sbjct: 280 --ELLA-MSD---LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE 333
Query: 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642
+AD + ++ + + + + +YE++ +
Sbjct: 334 VGDTTG----VADQAIQLLKDEELHRNMGERARESVYEQFRSE 372
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 93.7 bits (232), Expect = 2e-20
Identities = 40/346 (11%), Positives = 86/346 (24%), Gaps = 39/346 (11%)
Query: 330 YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTL 389
+ + + F ++ I ++ D ++ Y + N + + T
Sbjct: 52 FDAQTAEHVRGLNEQGFYYSGLSEFIDVHKPDIVMI--YNDPIVIGNYLLAMGKCSHRTK 109
Query: 390 PGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449
LY + ++ + + I S + S+ +G + D
Sbjct: 110 IVLYVDLVSKNIRENLWWIFSH-PKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKT 168
Query: 450 GTLSDRS--------KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVN 501
+ + + +M R K + V + + + +
Sbjct: 169 IYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES 228
Query: 502 KSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561
K + + + R +Y D V + E
Sbjct: 229 KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYN-ACD---VIVNCSSGE 284
Query: 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH------------------P 603
FGL E G P + GG + G + I P
Sbjct: 285 GFGLCSAEGAVLGKPLIISAVGGADDYFS-GDCVYKIKPSAWISVDDRDGIGGIEGIIDV 343
Query: 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649
D E ++ + K+ + + TW S ++
Sbjct: 344 DDLVEAF-----TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDII 384
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 1e-19
Identities = 57/467 (12%), Positives = 115/467 (24%), Gaps = 115/467 (24%)
Query: 187 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEH 246
GG + + +G + + T+ +
Sbjct: 14 GGLQRDFMRIASTV--------AARGHHVR----VYTQSWEGDCP-------------KA 48
Query: 247 THILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLV 306
+++VP + + V + + D ++G L
Sbjct: 49 FELIQVPVK-----------SHTNHGRNAEYYAWVQNHLKEHP---ADRVVGFNKMPGLD 94
Query: 307 ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366
A + +Y F + ++
Sbjct: 95 VYFAADVCYAEKVAQEKGFLYRLTS-----------RYRHYAAFERATFEQGKSTKLMML 143
Query: 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQK 426
T ++IA +F I+ PG D +
Sbjct: 144 TDKQIA---------------------DFQKHYQTEPERFQILPPGIYPDRKYSEQIPNS 182
Query: 427 RLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK-NSQL 485
R ++ +Q ++ + K + +E L
Sbjct: 183 REIYR----QKNGIKEQQ-------------NLLLQVGSDFGRKGVDRSIEALASLPESL 225
Query: 486 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 545
R L VV + K L + + + + + + + EL
Sbjct: 226 RHNTLLFVVGQ-------------DKPRKFEALAEKLGVRSNVHFFSGRNDVS---ELMA 269
Query: 546 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPD 604
AD + PA+ EA G+ ++EA+T GLP T G A I G I +P+ +
Sbjct: 270 -AAD---LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQE 325
Query: 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
Q E++ ++ + E+ +
Sbjct: 326 QLNEVLRKAL----TQSPLRMAWAENARHYA-DTQDLYSLPEKAADI 367
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 6e-17
Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 24/170 (14%)
Query: 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 516
S+ R+ K + +E + K + L +V + + E+
Sbjct: 23 GDFWLSVNRIYPEKRIELQLEVFKKLQDEK----LYIVGWF---------SKGDHAERYA 69
Query: 517 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 576
+ D +++ + + +LY + A E FGLT +EAM G P
Sbjct: 70 RKIMKIAPD-NVKFLGSVSEEELI-DLYS-RCK---GLLCTAKDEDFGLTPIEAMASGKP 123
Query: 577 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 626
A GG E + + +G+ ++ ++ + M +NP +KK
Sbjct: 124 VIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS----KNPDKFKK 168
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 3e-15
Identities = 25/188 (13%), Positives = 66/188 (35%), Gaps = 32/188 (17%)
Query: 458 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMH 516
+ + R + KN + L++ + + ++V ++ G + +I+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAV---ALSKYKQDIVLLLKG--------KGPDEKKIKL-- 49
Query: 517 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 576
L + + +F ++ N E+ + +V A E+ + +EA++ G+
Sbjct: 50 -LAQKLGVKAEFGFV----NSNELLEILK-TCT---LYVHAANVESEAIACLEAISVGIV 100
Query: 577 --TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634
+ + S F +P + + + + EN +++ + K
Sbjct: 101 PVIANSPLSATRQFALDERSLF--EPNNAKDLSAKIDWWL----ENKLERERMQNEYAKS 154
Query: 635 IYERYTWK 642
YT +
Sbjct: 155 A-LNYTLE 161
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 5e-15
Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 49/265 (18%)
Query: 394 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 453
R P F + G D+ + P + + K + ++L F
Sbjct: 153 RRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS-----ATRKKLGFTDT---------- 197
Query: 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513
P++ +RL K L++ + R L++V + +
Sbjct: 198 ---TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG---------SGRYESTLR 245
Query: 514 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP-------AFYEAFGLT 566
++ + +++ + AD F P E G+
Sbjct: 246 RLAT-----DVSQNVKFLGRLEYQDMI-NTLA-AAD---IFAMPARTRGGGLDVEGLGIV 295
Query: 567 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 626
+EA CG+P A GG E + +G ++ D+ +EL+ + ++P
Sbjct: 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAA 350
Query: 627 ISDGGLKRIYERYTWKIYSERLMTL 651
+ G + ++W+I ERL +
Sbjct: 351 MGAAGRAHVEAEWSWEIMGERLTNI 375
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 76.8 bits (188), Expect = 1e-14
Identities = 88/582 (15%), Positives = 156/582 (26%), Gaps = 200/582 (34%)
Query: 91 LQSSLSKAE-DHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPD 149
+S LSK E DH+ + L L +
Sbjct: 42 PKSILSKEEIDHIIMSK--------------------------DAVSGTLRLFWTLLSKQ 75
Query: 150 PSTLEKFLGR--------LPMVFNVVILSPHG----YFGQANVLGLPDTGGQVVYILDQV 197
++KF+ L P Y Q + L V+ V
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL----YNDNQVFAKYNV 131
Query: 198 RALENEMLLRIKRQGLDISPKILIV-------TRLIPDAKGTTCNQRLERVSGTEHTHIL 250
L+ + LR L + +LI T + D C +
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV----CL---------SYKVQC 178
Query: 251 RVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-----LQGFPDFIIGNYSDGNL 305
++ F I W++ + + + E LQ I N++ +
Sbjct: 179 KMDF----KIF--WLN--------------LKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 306 VASLLAYKMGITQCTIAHALEKTKYPDS-----DIY----WKKFDEKYHFSCQF---TAD 353
+S + ++ Q + L+ Y + ++ W F+ SC+ T
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN----LSCKILLTTRF 274
Query: 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSP 411
DF+ +T I+ +++ L D + +P
Sbjct: 275 ---KQVTDFLSAATTTHISLDHHSMTLTPDEVK----SLLLKYLDCRPQDLPREVLTTNP 327
Query: 412 ------GADMDI------YFPYSEKQKRLTALHGSIEQL-------LFD-----PEQNDE 447
+ + + K T + S+ L +FD P
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP--SA 385
Query: 448 HV--GTLS----DRSKPIVFSMARLDHVKNMTGLVECYGKNS-------------QLREL 488
H+ LS D K V + H LVE K S +L
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKY---SLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 489 VNL--VVVAGYIDVNKSKDREEI-------------------AEIEKMHELMKTYKLDGQ 527
L +V Y ++ K+ D +++ E + L + LD
Sbjct: 443 YALHRSIVDHY-NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD-- 499
Query: 528 FRWIAA---QTNRARNG-----------ELYR-YIADTKGAF 554
FR++ + A N + Y+ YI D +
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 75.3 bits (184), Expect = 4e-14
Identities = 82/541 (15%), Positives = 164/541 (30%), Gaps = 176/541 (32%)
Query: 16 VEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKS 75
VE+ L ++ L+S + Q + + + I++ D ++ D++ F++
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMY--IEQRDRLYNDNQ--------VFAK---- 128
Query: 76 AQLLMLN-DRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYV-LQGM-GFEKGW----- 127
N R+Q +L+ +L + + V + G+ G K W
Sbjct: 129 -----YNVSRLQPYLKLRQALLELRPA-------------KNVLIDGVLGSGKTWVALDV 170
Query: 128 -------------------G--DTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNV 166
++ E VLEM+ LL + P+ ++ + + +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHS 229
Query: 167 V------ILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKIL 220
+ +L Y N L L +L V+ N ++S KIL
Sbjct: 230 IQAELRRLLKSKPY---ENCL-L---------VLLNVQ---NAKAWN----AFNLSCKIL 269
Query: 221 IVTR-----------------LIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGI--- 260
+ TR L + T ++ + +P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 261 -------LRQWISRFDVWPYL--ETFTEDVGSEI----TAELQG-------FPDFIIGNY 300
+R ++ +D W ++ + T + S + AE + FP
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP------ 383
Query: 301 SDGNLVASLLA--YKMGITQCT--IAHALEKT----KYPDS------DIYW--------- 337
++ LL+ + I + + L K K P IY
Sbjct: 384 -SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 338 ----KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 393
+ + Y+ F +D + D Y I + E T F ++
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYF---YSHIGHHLKNIEHPERMTLF--RMVF 497
Query: 394 --------RVVHGIDVFDPKFNIVSPGADMDIYFPY-SEKQKRLTALHGSIEQLLFDPEQ 444
++ H ++ +I++ + Y PY + + L +I L E+
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557
Query: 445 N 445
N
Sbjct: 558 N 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 6e-11
Identities = 64/432 (14%), Positives = 134/432 (31%), Gaps = 129/432 (29%)
Query: 329 KYPDSDI---YWKKFDEKYHFSCQFTADLIAMNNADFIITST-YQEIAGTKNTVGQYESH 384
+Y DI + F +F C+ D+ I++ I +K+ V +
Sbjct: 15 QYQYKDILSVFEDAF--VDNFDCKDVQDMPKS-----ILSKEEIDHIIMSKDAVSG--TL 65
Query: 385 TAFTL------PGLYRVVHGIDVFDPKFNIVS--------PGADMDIYFPYSEKQKRLTA 430
F + + V + + KF ++S P +Y ++
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDR------ 118
Query: 431 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVF---SMARLDHVKN-----MTGLVECYGKN 482
L+ + +F +V R +P + ++ L KN + G GK
Sbjct: 119 LYNDNQ--VFAKY----NV----SRLQPYLKLRQALLELRPAKNVLIDGVLG---S-GKT 164
Query: 483 SQLRELVNLVVVAG-----------YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531
+ V ++ ++++ E + +E + +L+ Y++D +
Sbjct: 165 W----VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV--LEMLQKLL--YQIDPNWTSR 216
Query: 532 AAQTNRAR------NGELYRYIADTKGAF-------VQ-PAFYEAFGL---TVV----EA 570
+ ++ + EL R + VQ + AF L ++ +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 571 MTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG-KCKENPSHWKKISD 629
+T L T H ++H + PD+ L+ + + ++ P +
Sbjct: 277 VTDFLSAATTTH----ISLDHHSMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 630 GGLKRIYERY-----TWKIYSERLMTLAGVYGFWKY-------VSKLERRETRRYLEMFY 677
L I E TW + K ++ LE E R+ +
Sbjct: 328 RRLSIIAESIRDGLATWDNWKH--------VNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
Query: 678 ILKFRDLVKSVP 689
+ F +P
Sbjct: 380 V--FPPSAH-IP 388
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 13/115 (11%)
Query: 542 ELYRYIADTKGAFVQPAFY-EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 600
R AD + P E+FG+ +VEAM G A+ ++ G +G +
Sbjct: 278 SAMR-SAD---VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPV 333
Query: 601 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655
D A + + +R+ RY W + S ++M VY
Sbjct: 334 DDADGMAAALIGILE----DDQLRAGYVARASERV-HRYDWSVVSAQIM---RVY 380
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 8e-09
Identities = 8/104 (7%), Positives = 31/104 (29%), Gaps = 9/104 (8%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
+L + + + +E GL + ++ ++ ++
Sbjct: 310 DLLK-RSS---IGISLMISPHPSYPPLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQL 364
Query: 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYS 645
+P+ AE + + + ++ ++ + +S
Sbjct: 365 NPENIAETLVELC----MSFNNRDVDKKESSNMMFYINEFNEFS 404
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 28/165 (16%), Positives = 42/165 (25%), Gaps = 25/165 (15%)
Query: 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513
+ + M R+ K +V+AG + E EI
Sbjct: 159 VAKEDFLLFMGRVSPHKGALEAAAF------AHACGRRLVLAGPAW-----EPEYFDEIT 207
Query: 514 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA-----DTKGAFVQPAFYEAFGLTVV 568
+ I R L A + E V
Sbjct: 208 RR--------YGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 569 EAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMAD 612
EA G P T +G AEI+ + + PD+A +A
Sbjct: 260 EAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAG 304
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 10/109 (9%)
Query: 544 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH- 602
Y V P++YE +G T E G+P+ T G +E Y
Sbjct: 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGI 571
Query: 603 ---------PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642
PD++ E + D+ + + + + + + WK
Sbjct: 572 YIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWK 620
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 696 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.98 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.98 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.97 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.94 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.92 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.9 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.84 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.82 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.8 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.8 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.78 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.77 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.75 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.73 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.73 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.73 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.68 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.66 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.57 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.56 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.54 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.54 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.48 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.47 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.46 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.33 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.32 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.3 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.29 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.05 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.04 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 97.99 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.96 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.96 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.93 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.75 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.66 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.51 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.13 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 93.79 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 91.09 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 90.61 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 80.83 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-139 Score=1231.78 Aligned_cols=688 Identities=69% Similarity=1.163 Sum_probs=641.2
Q ss_pred CCCCCccchhhhhHHHHhhcHHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh------
Q 005444 4 PKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ------ 77 (696)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 77 (696)
++|+|++||+|||+++|++|||+|++|||||+++||++|++|+|++||+++.+ .++.++.+|+||++|++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (816)
T 3s28_A 6 RMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPE--QTRKKLEGGPFFDLLKSTQEAIVLP 83 (816)
T ss_dssp ---------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTT--SCGGGCCCSTHHHHHHTEEEEEECS
T ss_pred cccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH--hhhcccccCcHHHHHHhhhheeecC
Confidence 79999999999999999999999999999999999999999999999999873 4678999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 84 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (816)
T 3s28_A 84 PWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLN 163 (816)
T ss_dssp SEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHH
T ss_pred CeEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHHH
Confidence
Q ss_pred -----------------------------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccC
Q 005444 78 -----------------------------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWG 128 (696)
Q Consensus 78 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (696)
+|||||||+|+++|+++|++|++||+++|+||||++|+++||+||||||||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (816)
T 3s28_A 164 RHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG 243 (816)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSC
T ss_pred HHHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 005444 129 DTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRI 208 (696)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L 208 (696)
|||+||+|||++|+|+|++|||++||+|++|+||+|||++||+|||++|.+++|.||||||++||+|||||||++|+++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L 323 (816)
T 3s28_A 244 DNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRI 323 (816)
T ss_dssp SBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHH
Q 005444 209 KRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE 288 (696)
Q Consensus 209 ~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~ 288 (696)
+++||+|+|+|+|+|+.++++.|+.|.++.+.+.++++++|+|+|+++.++++++|++++.+|+|+..|+..+...+...
T Consensus 324 ~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~ 403 (816)
T 3s28_A 324 KQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKE 403 (816)
T ss_dssp HHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHH
T ss_pred HHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988888999999999999999998888888777
Q ss_pred hCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 289 LQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 289 ~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..++|||||+|++.+++++.++++++|+|+|+|.|+++..++..++.+|..+...|++.+++.+|..+++.||.|||+|.
T Consensus 404 ~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~ 483 (816)
T 3s28_A 404 LNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483 (816)
T ss_dssp CSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCH
T ss_pred cCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCH
Confidence 67799999999999999999999999999999999999888888888999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
++++.+++.+++|.++.+|++|++|++++|++++++|+.|||||+|.+.|.|......+....++.+++.++++.+.++.
T Consensus 484 ~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~ 563 (816)
T 3s28_A 484 QEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEH 563 (816)
T ss_dssp HHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTE
T ss_pred HHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777777888899999999999999
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
+|++.++++++|+|+||+++.||++.|++|++++.+.+++++|+|+|+|++ ..+.++++.++.+.++++++++++.++|
T Consensus 564 lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~V 642 (816)
T 3s28_A 564 LCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQF 642 (816)
T ss_dssp ESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBBE
T ss_pred hcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCcE
Confidence 999888999999999999999999999999999988778999999999987 6788899999999999999999999999
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
+|+|++.+.++.+++++++++++|+||+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|++++|+|++++++
T Consensus 643 ~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~ 722 (816)
T 3s28_A 643 RWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAAD 722 (816)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHH
T ss_pred EEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHH
Confidence 99998888888899999999668999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhccccccccc
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSV 688 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (696)
+|.++++++..|++.+++|+++|++++.++|||+.++++++++|+.|+||+++++++|++++||+||||+|+|||||++|
T Consensus 723 aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~wk~vs~~~r~~~~ryle~~~~l~~~~~~~~~ 802 (816)
T 3s28_A 723 TLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAV 802 (816)
T ss_dssp HHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHTHHHHHHHS
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhHhhhcchhhhHHHHHHHHHHHHHhhhhHHhcC
Confidence 99999888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC
Q 005444 689 PLASEN 694 (696)
Q Consensus 689 ~~~~~~ 694 (696)
|+++|+
T Consensus 803 ~~~~~~ 808 (816)
T 3s28_A 803 PLAQDD 808 (816)
T ss_dssp CCCCC-
T ss_pred CCccch
Confidence 999995
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=421.78 Aligned_cols=434 Identities=29% Similarity=0.495 Sum_probs=313.9
Q ss_pred CCceeEEEEEccccccCCcc--cCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccc
Q 005444 160 LPMVFNVVILSPHGYFGQAN--VLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 237 (696)
Q Consensus 160 ~p~~~rI~iis~h~~~~~~~--~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~ 237 (696)
+++.|||++++++++|.... +.+.|..||.+.++. +|+++|+++||+|+ |+|..........+...
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~ 71 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGE 71 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCS
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhh
Confidence 34568999999999885432 245578899999999 66666799999999 88865332111122222
Q ss_pred eeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCc
Q 005444 238 LERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT 317 (696)
Q Consensus 238 ~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip 317 (696)
.+......+++++++|..... +..+..+|.++..+...+.+.+.+. ..+|||||+|++..++++.++++..++|
T Consensus 72 ~~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 72 IDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp EEECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred HHhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCc
Confidence 333312347899999875432 2233445666655555555555442 3589999999877777888888889999
Q ss_pred EEEEecCCCccCCC---CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccce
Q 005444 318 QCTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 394 (696)
Q Consensus 318 ~v~t~H~l~~~~~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~ 394 (696)
+|++.|+....... ........+...+++......++..++.+|.||++|...++...+..
T Consensus 146 ~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~---------------- 209 (499)
T 2r60_A 146 FTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHD---------------- 209 (499)
T ss_dssp EEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSG----------------
T ss_pred EEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhh----------------
Confidence 99999986432110 00100011122222222334567789999999999998765322110
Q ss_pred eecc-c-cc-CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC-----CCCCCCCCEEEEEccc
Q 005444 395 VVHG-I-DV-FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG-----TLSDRSKPIVFSMARL 466 (696)
Q Consensus 395 ~~~g-i-~~-~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g-----~l~~~~k~iIl~vGRL 466 (696)
..| + +. ...++.|||||+|.+.|.|......+ . ..++.+| + ++++++|+|+||+
T Consensus 210 -~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~-~--------------~~r~~~~~~~~~~--~~~~~~i~~vGrl 271 (499)
T 2r60_A 210 -LYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIK-A--------------KITKYLERDLGSE--RMELPAIIASSRL 271 (499)
T ss_dssp -GGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHH-H--------------HHHHHHHHHSCGG--GTTSCEEEECSCC
T ss_pred -cccccccccCCCCeEEECCCcChhhcCccchhhhH-H--------------HHHHHhccccccc--CCCCcEEEEeecC
Confidence 001 1 00 25689999999999988876431110 0 0112234 3 5678899999999
Q ss_pred cccCChHHHHHHHHHhhccCCC-eEEEEEeCccCCCCC---cchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhH
Q 005444 467 DHVKNMTGLVECYGKNSQLREL-VNLVVVAGYIDVNKS---KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 542 (696)
Q Consensus 467 ~~~Kgi~~Llea~~~l~~~~~~-~~LvIvG~g~~~~~~---~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e 542 (696)
.+.||++.+++|+..+.+..++ +.|+|+|++..+..+ .+.++.++.++++++++++++.++|.|+| .++.++
T Consensus 272 ~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~ 347 (499)
T 2r60_A 272 DQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQE 347 (499)
T ss_dssp CGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHH
T ss_pred ccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHHH
Confidence 9999999999999988765444 589999983321000 01234455788999999999999999999 677889
Q ss_pred HHHHHHccc----cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhh
Q 005444 543 LYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618 (696)
Q Consensus 543 l~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~ 618 (696)
+..+|+. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++
T Consensus 348 ~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll---- 422 (499)
T 2r60_A 348 LAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF---- 422 (499)
T ss_dssp HHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH----
T ss_pred HHHHHHh-cCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHH----
Confidence 9999995 9 999999999999999999999999999999999999999999999999999999999997776
Q ss_pred cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 619 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 619 ~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+|++.+++|++++++++.++|||+.+++++.++|+.
T Consensus 423 ~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 423 ESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 899999999999999998889999999999999874
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=393.08 Aligned_cols=400 Identities=17% Similarity=0.180 Sum_probs=298.5
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCc---------
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--------- 233 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~--------- 233 (696)
.|||++++++.+| +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 5899999988774 35799999999 66667799999999 9987654432110
Q ss_pred -cccceeeecCCCceEEEEecccCcccccccccccCCCcc-cHH-------HHHHHHHHHHHHHh--CCCCeEEEEeCCC
Q 005444 234 -CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP-YLE-------TFTEDVGSEITAEL--QGFPDFIIGNYSD 302 (696)
Q Consensus 234 -~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p-~l~-------~f~~~~~~~i~~~~--~~~pDvIh~h~~~ 302 (696)
...... .....++.+++++. .. ..+..+++ +.. .|...+.+.+...+ ..+|||||+|++.
T Consensus 62 ~~~~~~~-~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~ 132 (439)
T 3fro_A 62 EVQVKVS-YEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWH 132 (439)
T ss_dssp EEEEEEE-EEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGG
T ss_pred ccceeee-eccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchh
Confidence 000000 00224688888876 21 22333333 222 23333334333321 6799999999988
Q ss_pred chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccc
Q 005444 303 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 382 (696)
Q Consensus 303 ~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~ 382 (696)
.++++.++++..++|+|++.|+.....++........+.. ..+......+...++.||.|+++|....+. ..+.
T Consensus 133 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~~~-- 206 (439)
T 3fro_A 133 TVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID---EWGF-- 206 (439)
T ss_dssp GHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH---THHH--
T ss_pred hhhhHHHHhhccCCCEEEEecccccccCchHHhCcccccc-ccccceeeHhhhhhhhccEEEecCHHHHHH---Hhhh--
Confidence 8888888888899999999999864332211000000000 001122245677899999999999987652 1110
Q ss_pred ccccccccccceeecccccCCCcEEEecCCCcCCCCCCCc----hHHHHHhhhhcchhhhcCCccccccccCCCCCCCCC
Q 005444 383 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS----EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 458 (696)
Q Consensus 383 ~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~----~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~ 458 (696)
++....++.+||||+|.+.|.|.. ....+ ...++.+|+ +++ +
T Consensus 207 ----------------~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~-~ 252 (439)
T 3fro_A 207 ----------------FRNFEGKITYVFNGIDCSFWNESYLTGSRDERK---------------KSLLSKFGM--DEG-V 252 (439)
T ss_dssp ----------------HGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH---------------HHHHHHHTC--CSC-E
T ss_pred ----------------hhhcCCceeecCCCCCchhcCcccccchhhhhH---------------HHHHHHcCC--CCC-c
Confidence 123378999999999999988762 11111 112344666 555 9
Q ss_pred EEEEEcccc-ccCChHHHHHHHHHhhccC--CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 459 IVFSMARLD-HVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 459 iIl~vGRL~-~~Kgi~~Llea~~~l~~~~--~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
+|+|+||+. +.||++.+++|+..+.+.. ++++|+|+|+|+. .+.+.+++++++++ +.+.|.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~l~~~~~~~~--~~~~~~g--- 317 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG--NVKVITE--- 317 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH----------HHHHHHHHHHHHCT--TEEEECS---
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh----------hHHHHHHHHHhhcC--CEEEEcC---
Confidence 999999999 9999999999999998876 8999999999875 33478899999988 7788898
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 615 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~ 615 (696)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 -~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll- 393 (439)
T 3fro_A 318 -MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL- 393 (439)
T ss_dssp -CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH-
T ss_pred -CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH-
Confidence 7788999999995 999999999999999999999999999999999999999887 999999999999999998777
Q ss_pred hhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 616 KCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 616 ~l~~-dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+ |++.+++|++++++++ ++|||+.+++++.++|+.
T Consensus 394 ---~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 394 ---ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp ---HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHT
T ss_pred ---hcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHH
Confidence 6 8999999999999999 889999999999999874
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=393.75 Aligned_cols=400 Identities=21% Similarity=0.318 Sum_probs=292.8
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
.+|||++++.+.+|.. ..|.+..||.+.++. +|+++|+++||+|+ |+|....... ......
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 4689999999887632 234457899999999 66666799999999 8886532110 011111
Q ss_pred cCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEE
Q 005444 242 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 321 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t 321 (696)
..++.+++++.....+ .++..++.++..|...+.+..... ..+||+||+|++..++++.++++..++|+|++
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 1368888888654321 222334445555555444442222 22499999998777777778888889999999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
.|+............ ..... ......+...++.+|.|+++|....+...+. .|+
T Consensus 152 ~h~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~g~-- 205 (438)
T 3c48_A 152 AHTLAAVKNSYRDDS-DTPES----EARRICEQQLVDNADVLAVNTQEEMQDLMHH-------------------YDA-- 205 (438)
T ss_dssp CSSCHHHHSCC-----CCHHH----HHHHHHHHHHHHHCSEEEESSHHHHHHHHHH-------------------HCC--
T ss_pred ecCCccccccccccc-CCcch----HHHHHHHHHHHhcCCEEEEcCHHHHHHHHHH-------------------hCC--
Confidence 998743221100000 00000 0111235667899999999998876532111 122
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
...++.+||||+|.+.|.|...... ...++.+|+ ++++++|+++||+.+.||++.+++|+..
T Consensus 206 ~~~k~~vi~ngvd~~~~~~~~~~~~----------------~~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 206 DPDRISVVSPGADVELYSPGNDRAT----------------ERSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp CGGGEEECCCCCCTTTSCCC----C----------------HHHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred ChhheEEecCCccccccCCcccchh----------------hhhHHhcCC--CCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 2578999999999998877533210 001233565 5678899999999999999999999999
Q ss_pred hhccCC--CeEEEEEeC----ccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEE
Q 005444 482 NSQLRE--LVNLVVVAG----YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 555 (696)
Q Consensus 482 l~~~~~--~~~LvIvG~----g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV 555 (696)
+.+..| +++|+|+|+ |.. .+.++++++++++.++|.|+| .++.+++..+++. +|++|
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~g~~------------~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v 330 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGPNAT------------PDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVA 330 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEE
T ss_pred HHhhCCCcceEEEEEeCCCCCCcH------------HHHHHHHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEE
Confidence 987766 899999998 433 567889999999999999999 6778899999995 99999
Q ss_pred eCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 556 ~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++
T Consensus 331 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~ 406 (438)
T 3c48_A 331 VPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHA 406 (438)
T ss_dssp ECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred ECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998776 79999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHH
Q 005444 636 YERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 636 ~~~ysw~~~a~~l~~ly~~ 654 (696)
.+ |||+.+++++.++|+.
T Consensus 407 ~~-~s~~~~~~~~~~~~~~ 424 (438)
T 3c48_A 407 RT-FSWAATAAQLSSLYND 424 (438)
T ss_dssp HH-HHHHHHHHHHHHHHHH
T ss_pred Hh-CCHHHHHHHHHHHHHH
Confidence 77 9999999999999864
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=403.58 Aligned_cols=438 Identities=14% Similarity=0.142 Sum_probs=284.1
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee-
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV- 241 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i- 241 (696)
-|||+++|...+|- -.|||...++. .|+++|+++||+|. |+++.++.-....-......+
T Consensus 9 ~MkIl~vs~E~~P~-------~K~GGLadvv~--------~L~~aL~~~G~~V~----Vi~P~Y~~~~~~~~~~~~~~~~ 69 (536)
T 3vue_A 9 HMNVVFVGAEMAPW-------SKTGGLGDVLG--------GLPPAMAANGHRVM----VISPRYDQYKDAWDTSVVAEIK 69 (536)
T ss_dssp CCEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCSCCTTCEEEEEEEEEE
T ss_pred CcEEEEEEEeccch-------hccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCchhhhhhcccceEEEEE
Confidence 58999999988753 36899999998 56666799999999 998876543221000000000
Q ss_pred -cC-CCceEEEEecccCccc-ccc--ccccc------CCCc---------ccHHHHHH--HHHHHHHHHh----------
Q 005444 242 -SG-TEHTHILRVPFRSEKG-ILR--QWISR------FDVW---------PYLETFTE--DVGSEITAEL---------- 289 (696)
Q Consensus 242 -~~-~~~v~I~rvp~~~~~~-~~~--~wisr------~~i~---------p~l~~f~~--~~~~~i~~~~---------- 289 (696)
.+ ...+.+++.+...-.- ++. .+..| ..++ ...++|+. .+.-.+...+
T Consensus 70 ~~~~~~~~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~ 149 (536)
T 3vue_A 70 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKG 149 (536)
T ss_dssp ETTEEEEEEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCS
T ss_pred ecCceEEEEEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhc
Confidence 00 0112222221110000 000 00001 0111 11222221 1122222221
Q ss_pred -CCCCeEEEEeCCCchHHHHHHhhc-------CCCcEEEEecCCCccCC-CC-----CCccHhhhh--------hhhhcc
Q 005444 290 -QGFPDFIIGNYSDGNLVASLLAYK-------MGITQCTIAHALEKTKY-PD-----SDIYWKKFD--------EKYHFS 347 (696)
Q Consensus 290 -~~~pDvIh~h~~~~~l~a~lla~~-------~gip~v~t~H~l~~~~~-~~-----s~~~~~~~~--------~~y~~~ 347 (696)
.+.+||||+|+|.+++++.++... .++|+|+|+|++..... +. ....+.... ....+.
T Consensus 150 ~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (536)
T 3vue_A 150 TYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEG 229 (536)
T ss_dssp CCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCE
T ss_pred cCCCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccc
Confidence 245788999999999888877654 36999999999754321 00 000000000 001111
Q ss_pred chhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHH
Q 005444 348 CQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR 427 (696)
Q Consensus 348 ~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r 427 (696)
..+...+..+..||.|+|+|+..++++....+ +.+. + . ......++.+|+||||.+.|.|..+....
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~-------~g~~-l----~-~~~~~~~i~~I~NGiD~~~~~p~~d~~~~ 296 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISGIA-------RGCE-L----D-NIMRLTGITGIVNGMDVSEWDPSKDKYIT 296 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTTCC-------CCSS-S----C-CCSCCCSCEECCCCCCTTTSCTTTCSSSS
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcccc-------cccc-c----c-cccccCCeEEEECCcchhhcCCCCccccc
Confidence 22334567889999999999987764432211 0000 0 0 01125689999999999999986432100
Q ss_pred Hhh-hhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcch
Q 005444 428 LTA-LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDR 506 (696)
Q Consensus 428 ~~~-~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~ 506 (696)
... ....++.+..++....+.+|+..+++.|+|+|+||+.++||++.|++|+.++.+ ++.+|+|+|.|..
T Consensus 297 ~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~------- 367 (536)
T 3vue_A 297 AKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK------- 367 (536)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH-------
T ss_pred cccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEEeccCc-------
Confidence 000 000011122223344556788778999999999999999999999999999976 4689999998865
Q ss_pred HHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcc
Q 005444 507 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA 586 (696)
Q Consensus 507 e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~ 586 (696)
.....++..+..+ .++|.+.+ ..+.+++..+++ ++|+||+||++|+||++++|||+||+|||+|++||++
T Consensus 368 ---~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~-~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 368 ---KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMA-GADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp ---HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHH-HCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred ---hHHHHHHHHHhhc--CCceEEEE----eccHHHHHHHHH-hhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCch
Confidence 2344555555554 46899998 667788888888 4999999999999999999999999999999999999
Q ss_pred hhhccCCeEE----------EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 005444 587 EIIEHGASGF----------HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYG 656 (696)
Q Consensus 587 EiI~dg~~G~----------l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~ 656 (696)
|+|.|+.+|| +++|.|+++++++|.+++. +..++ .|++|.+++. .++|||+..+++|+++|+..+
T Consensus 438 e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 438 DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH-hcCcH-HHHHHHHHHH---HhcCCHHHHHHHHHHHHHHhh
Confidence 9999999999 6788899999999988874 33455 5788887774 468999999999999998653
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=362.98 Aligned_cols=368 Identities=17% Similarity=0.266 Sum_probs=280.9
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
++|||++++++.. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999998755 45799999999 555556 699999 8876643210 0111
Q ss_pred cCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCc-EEE
Q 005444 242 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT-QCT 320 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip-~v~ 320 (696)
....++.+++++.... ++.. .+...+.+.+.+ .+||+||+|..........++++.++| +|+
T Consensus 53 ~~~~~~~~~~~~~~~~-------------~~~~-~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVM-------------LPTP-TTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSC-------------CSCH-HHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEcccccc-------------ccch-hhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 1223578888876432 1111 233344444443 389999999877654445556777887 888
Q ss_pred EecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccc
Q 005444 321 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400 (696)
Q Consensus 321 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~ 400 (696)
+.|+... .|.. ... .....+..++.+|.|+++|....+..++. .+
T Consensus 116 ~~h~~~~--------~~~~-~~~-----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~-- 160 (394)
T 3okp_A 116 STHGHEV--------GWSM-LPG-----SRQSLRKIGTEVDVLTYISQYTLRRFKSA-------------------FG-- 160 (394)
T ss_dssp ECCSTHH--------HHTT-SHH-----HHHHHHHHHHHCSEEEESCHHHHHHHHHH-------------------HC--
T ss_pred Eeccchh--------hhhh-cch-----hhHHHHHHHHhCCEEEEcCHHHHHHHHHh-------------------cC--
Confidence 9997532 1110 000 11123457789999999998876532211 11
Q ss_pred cCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHH
Q 005444 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 480 (696)
Q Consensus 401 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~ 480 (696)
...++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.+++++.
T Consensus 161 -~~~~~~vi~ngv~~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 161 -SHPTFEHLPSGVDVKRFTPATPEDKS----------------ATRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp -SSSEEEECCCCBCTTTSCCCCHHHHH----------------HHHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred -CCCCeEEecCCcCHHHcCCCCchhhH----------------HHHHhcCC--CcCceEEEEEeccccccCHHHHHHHHH
Confidence 15799999999999999884333211 11234666 667799999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC
Q 005444 481 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560 (696)
Q Consensus 481 ~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 560 (696)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+++. +|++|+||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~------------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~ 282 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY------------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPART 282 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT------------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCC
T ss_pred HHHhhCCCeEEEEEcCchH------------HHHHHHHH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCcc
Confidence 9988889999999999876 56677777 56778999999 7778999999995 9999999999
Q ss_pred -------CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 561 -------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 561 -------E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++ .|++.+++|++++++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRA 357 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999997776 899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 005444 634 RIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 634 ~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++.++|||+.+++++.++|+.
T Consensus 358 ~~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 358 HVEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHTBHHHHHHHHHHHHHS
T ss_pred HHHHhCCHHHHHHHHHHHHHH
Confidence 998899999999999999863
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-41 Score=374.50 Aligned_cols=430 Identities=14% Similarity=0.108 Sum_probs=280.9
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCc----------
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT---------- 233 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~---------- 233 (696)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999876642 24699999999 66667799999999 8886532110000
Q ss_pred -cccceeee-cCCCceEEEEecccCcccccccccccC--CCccc----HHHHHHHHHHHHHHHh-CCCCeEEEEeCCCch
Q 005444 234 -CNQRLERV-SGTEHTHILRVPFRSEKGILRQWISRF--DVWPY----LETFTEDVGSEITAEL-QGFPDFIIGNYSDGN 304 (696)
Q Consensus 234 -~~~~~e~i-~~~~~v~I~rvp~~~~~~~~~~wisr~--~i~p~----l~~f~~~~~~~i~~~~-~~~pDvIh~h~~~~~ 304 (696)
.....+.. ....++.+++++............... .-|+. +..+...+.+.+.... ..+|||||+|.+..+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~ 141 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG 141 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchh
Confidence 00000000 001367888876421000000000000 00111 1112222222222111 168999999998777
Q ss_pred HHHHHHh-hcCCCcEEEEecCCCccCCCC-CCccHhhhhhh------hhccchhhhhHHhhhcCCEEEeccHHHHhhccc
Q 005444 305 LVASLLA-YKMGITQCTIAHALEKTKYPD-SDIYWKKFDEK------YHFSCQFTADLIAMNNADFIITSTYQEIAGTKN 376 (696)
Q Consensus 305 l~a~lla-~~~gip~v~t~H~l~~~~~~~-s~~~~~~~~~~------y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~ 376 (696)
+++.+++ +..++|+|++.|+........ .......+... ..+......++..++.+|.|+++|...++...+
T Consensus 142 ~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 221 (485)
T 2qzs_A 142 LAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITE 221 (485)
T ss_dssp THHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTS
T ss_pred HHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhc
Confidence 7777777 788999999999974321100 00000000000 001111234567889999999999987653221
Q ss_pred ccccccccccccccccceeeccccc------CC--CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 377 TVGQYESHTAFTLPGLYRVVHGIDV------FD--PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 377 ~v~qy~~~~~~~~p~l~~~~~gi~~------~~--~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
. ..|+++ .. .++.+||||+|.+.|.|..............++.........++.
T Consensus 222 ~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 2qzs_A 222 P------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIA 283 (485)
T ss_dssp H------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHH
T ss_pred c------------------ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHH
Confidence 1 001110 12 689999999999988875321000000000000000000122344
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
+|+..++++++|+|+||+.+.||++.|++|+..+.+ ++++|+|+|+|+. .+.+.+++++++++ ++|
T Consensus 284 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v 349 (485)
T 2qzs_A 284 MGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP----------VLQEGFLAAAAEYP--GQV 349 (485)
T ss_dssp HTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH----------HHHHHHHHHHHHST--TTE
T ss_pred cCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch----------HHHHHHHHHHHhCC--CcE
Confidence 676323378999999999999999999999999876 4899999999853 24677888898875 678
Q ss_pred E-EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC---------CeEEEE
Q 005444 529 R-WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHI 598 (696)
Q Consensus 529 ~-flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg---------~~G~l~ 598 (696)
. |.| . +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|+++
T Consensus 350 ~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 350 GVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp EEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE
T ss_pred EEeCC----C-CHHHHHHHHHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE
Confidence 6 887 3 46677899995 999999999999999999999999999999999999999998 899999
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 599 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 599 ~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++|+++++++|.+++. +..|++.+++|++++++ ++|||+.++++|+++|+.
T Consensus 424 ~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 424 EDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp CSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 99999999999977652 22699999999999974 799999999999999864
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=360.51 Aligned_cols=358 Identities=18% Similarity=0.254 Sum_probs=264.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccc
Q 005444 184 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 263 (696)
Q Consensus 184 p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 263 (696)
|..||.+.++. +|+++|+++||+|+ |+|...+.... ...+++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEeccccccc-----
Confidence 55799999999 66667799999999 88865322100 11234666655543211
Q ss_pred ccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchH-HHHHHhhcC--CCcEEEEecCCCccCCCCCCccHhhh
Q 005444 264 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL-VASLLAYKM--GITQCTIAHALEKTKYPDSDIYWKKF 340 (696)
Q Consensus 264 wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l-~a~lla~~~--gip~v~t~H~l~~~~~~~s~~~~~~~ 340 (696)
.+...++...+...+.+.+.+. +||+||+|++.+.. .+.+.++.. ++|+|++.|+.........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~------- 143 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSD------- 143 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTTC-------
T ss_pred ---ccccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCCC-------
Confidence 1111122223334444555443 89999999876543 344444444 5999999998432111100
Q ss_pred hhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCC
Q 005444 341 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 420 (696)
Q Consensus 341 ~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p 420 (696)
..+ ....+..++.+|.|+++|+...+...+. . + ...++.+||||+|.+.|.|
T Consensus 144 -~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~--~-~~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 144 -PSL-----NNLIRFGIEQSDVVTAVSHSLINETHEL-------------------V--K-PNKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp -TTT-----HHHHHHHHHHSSEEEESCHHHHHHHHHH-------------------T--C-CSSCEEECCCCCCTTTCCC
T ss_pred -HHH-----HHHHHHHHhhCCEEEECCHHHHHHHHHh-------------------h--C-CcccEEEecCCccHHhcCC
Confidence 000 1124457889999999998876532111 0 1 1468999999999998877
Q ss_pred CchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCC
Q 005444 421 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDV 500 (696)
Q Consensus 421 ~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~ 500 (696)
......+ +.+|+ ++++++|+++||+.+.||++.+++|+..+.+. ++++|+|+|+|+.
T Consensus 196 ~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQLK-------------------KEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHHHH-------------------HHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred cchHHHH-------------------HHcCC--CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-
Confidence 5332211 22554 56788999999999999999999999999766 5699999999876
Q ss_pred CCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 501 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 501 ~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
.+.++++++++++.++|.|+|+ .+++..+++. +|++|+||.+|+||++++|||+||+|||+|
T Consensus 253 -----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 253 -----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHHcCCCCeEEEeCc------hhhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEe
Confidence 6788999999999999999994 2467888885 999999999999999999999999999999
Q ss_pred CCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 581 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 581 ~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+.||..|++.++.+|++++++|+++++++|.+++ .|++.+++|++++++++.++|||+.+++++.++|+.
T Consensus 315 ~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 315 RVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred cCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997776 799999999999999999999999999999999874
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-41 Score=375.01 Aligned_cols=430 Identities=16% Similarity=0.170 Sum_probs=280.9
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcccc-------
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ------- 236 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~------- 236 (696)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+.... .+..
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccc-cccccceeEEE
Confidence 7999999877642 24699999999 66667799999999 88865322100 0000
Q ss_pred ------ceeee-cCCCceEEEEecccCccccccc--cccc--CCCccc----HHHHHHHHHHHHHHHh--CCCCeEEEEe
Q 005444 237 ------RLERV-SGTEHTHILRVPFRSEKGILRQ--WISR--FDVWPY----LETFTEDVGSEITAEL--QGFPDFIIGN 299 (696)
Q Consensus 237 ------~~e~i-~~~~~v~I~rvp~~~~~~~~~~--wisr--~~i~p~----l~~f~~~~~~~i~~~~--~~~pDvIh~h 299 (696)
..... ....++.+++++...... +. .... ..-|+. +..|...+.+ +.+.+ ..+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYYE--RSGGPYLGQTGKDYPDNWKRFAALSLAAAR-IGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHC--SSSCSSBCTTSSBCTTHHHHHHHHHHHHHH-HHTTCSSSCCCSEEEEE
T ss_pred EEecCCeEEEEEEEecCceEEEEeChHHhC--CCccccCCcccccccchHHHHHHHHHHHHH-HHHHhccCCCCCEEEec
Confidence 00000 001367888876431000 00 0000 000111 1112222222 22222 5689999999
Q ss_pred CCCchHHHHHHhhc--CCCcEEEEecCCCccCC-CCCCc-----cHhhhh-hhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 300 YSDGNLVASLLAYK--MGITQCTIAHALEKTKY-PDSDI-----YWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 300 ~~~~~l~a~lla~~--~gip~v~t~H~l~~~~~-~~s~~-----~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.+..++++.++++. .++|+|+++|+...... +.... .+..+. ....+......++.+++.+|.|+++|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred ccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhH
Confidence 97767777777765 89999999999753211 00000 000000 00001111234567889999999999987
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
.+...+.. | ++.++.+ ++....++.+||||+|.+.|.|..............++....+....++.+|
T Consensus 218 ~~~~~~~~--~----g~~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 285 (485)
T 1rzu_A 218 AEEILTAE--F----GMGLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (485)
T ss_dssp HHHTTSHH--H----HTTCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHhccc--c----CcchHHH------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC
Confidence 65322110 0 0000000 0123578999999999998887542100000000000000000011233466
Q ss_pred CCCCCC-CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 451 TLSDRS-KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 451 ~l~~~~-k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
+ +++ +++|+|+||+.+.||++.|++|+..+.+ ++++|+|+|+|+. .+.+.+++++++++ ++|.
T Consensus 286 ~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 286 I--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV----------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp C--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH----------HHHHHHHHHHHHTT--TTEE
T ss_pred C--CCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch----------HHHHHHHHHHHhCC--CcEE
Confidence 6 333 6799999999999999999999999876 4899999999853 24677888888875 6787
Q ss_pred -EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC---------CeEEEEC
Q 005444 530 -WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHID 599 (696)
Q Consensus 530 -flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg---------~~G~l~~ 599 (696)
|.| . +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIG----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EecC----C-CHHHHHHHHhc-CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeC
Confidence 787 3 45677889995 999999999999999999999999999999999999999998 8999999
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++|+++++++|.+++. +..|++.+++|++++++ ++|||+.++++|+++|+.
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 9999999999977652 23699999999999974 789999999999999863
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=357.58 Aligned_cols=367 Identities=15% Similarity=0.189 Sum_probs=264.5
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++++..| .||.+.++. +|++.|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~~----------~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecCC----------CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 799999986542 499999999 66667799999999 8886532110
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
.+++.+.++|...... ......+...+.+.+.+ .+||+||+|.+.++..+...+...+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhc---cCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1257788877643211 01112333334444433 489999999866543322222333334333334
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhh--hcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM--NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~--~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
+... .....+.+.. ..+...+ +.+|.|+++|+...+...+. .|+
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~-- 157 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQKH-------------------YQT-- 157 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHHH-------------------HCC--
T ss_pred cchh-----------hhcHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHHHHHHH-------------------hCC--
Confidence 3110 0111111111 1233333 37999999998876532111 122
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
...++.+||||+|.+.|.|......+ ...++.+|+ ++++++|+|+||+.+.||++.+++++..
T Consensus 158 ~~~~~~vi~ngv~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 158 EPERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp CGGGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred ChhheEEecCCcCHHhcCcccchhHH---------------HHHHHHhCC--CCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 25689999999999888764321111 011233666 6678899999999999999999999998
Q ss_pred hhcc-CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC
Q 005444 482 NSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560 (696)
Q Consensus 482 l~~~-~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 560 (696)
+.+. .++++|+|+|+|.. +.++++++++++.++|.|+|+ .+++..+++. +|++|+||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSC
T ss_pred hHhccCCceEEEEEcCCCH-------------HHHHHHHHHcCCCCcEEECCC------cccHHHHHHh-cCEEEecccc
Confidence 8665 57899999999754 467888999999999999994 2468889985 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEEC-CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhC
Q 005444 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID-PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639 (696)
Q Consensus 561 E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~-p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~y 639 (696)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+|+++++++|.+++ +|++.+++|++++++++ ++|
T Consensus 281 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~ 355 (374)
T 2iw1_A 281 EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQ 355 (374)
T ss_dssp CSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHS
T ss_pred CCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHH-HHh
Confidence 999999999999999999999999999999999999998 899999999998776 79999999999999998 578
Q ss_pred CHHHHHHHHHHHHHHh
Q 005444 640 TWKIYSERLMTLAGVY 655 (696)
Q Consensus 640 sw~~~a~~l~~ly~~y 655 (696)
+|...++++.++++.|
T Consensus 356 ~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 356 DLYSLPEKAADIITGG 371 (374)
T ss_dssp CCSCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHh
Confidence 9999999999988754
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=352.50 Aligned_cols=288 Identities=19% Similarity=0.203 Sum_probs=222.7
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEE-eccHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII-TSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II-t~S~~ 369 (696)
.+||+||+|.+....++.++++ ++|+|++.|+..... ....|+. ....+..+|.++ ++|..
T Consensus 125 ~~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~---~~~~~~~-------------~~~~~~~~~~~i~~~s~~ 186 (416)
T 2x6q_A 125 SSFDYVLVHDPQPAALIEFYEK--KSPWLWRCHIDLSSP---NREFWEF-------------LRRFVEKYDRYIFHLPEY 186 (416)
T ss_dssp GGSSEEEEESSTTGGGGGGSCC--CSCEEEECCSCCSSC---CHHHHHH-------------HHHHHTTSSEEEESSGGG
T ss_pred cCCCEEEEeccchhhHHHHHHh--cCCEEEEEccccCCc---cHHHHHH-------------HHHHHHhCCEEEEechHH
Confidence 4899999999876554444433 389999999753321 1111111 112345667665 55532
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+ +++ ..++.+||||+|...|.+......... ..++.+
T Consensus 187 ~~~-------------------------~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~--------------~~r~~~ 225 (416)
T 2x6q_A 187 VQP-------------------------ELD--RNKAVIMPPSIDPLSEKNVELKQTEIL--------------RILERF 225 (416)
T ss_dssp SCT-------------------------TSC--TTTEEECCCCBCTTSTTTSCCCHHHHH--------------HHHHHT
T ss_pred HHh-------------------------hCC--ccceEEeCCCCChhhhcccccChhhHH--------------HHHHHh
Confidence 110 111 468999999999877754321110000 112336
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
|+ ++++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|+|+.. + ....+.++++++++++.++|.
T Consensus 226 ~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~----~---~~~~~~l~~~~~~~~~~~~V~ 296 (416)
T 2x6q_A 226 DV--DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHD----D---PEGWIYFEKTLRKIGEDYDVK 296 (416)
T ss_dssp TC--CTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTT----C---HHHHHHHHHHHHHHTTCTTEE
T ss_pred CC--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCccc----c---hhHHHHHHHHHHHhCCCCcEE
Confidence 66 67789999999999999999999999999888889999999999751 1 123456788899999999999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 609 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~ 609 (696)
|+|+.. .++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+++++++
T Consensus 297 ~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~ 372 (416)
T 2x6q_A 297 VLTNLI-GVHAREVNAFQRA-SDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEV 372 (416)
T ss_dssp EEEGGG-TCCHHHHHHHHHH-CSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHH
T ss_pred EecccC-CCCHHHHHHHHHh-CCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHH
Confidence 999654 3456789999995 9999999999999999999999999999999999999999999999997 99999999
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 610 I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|.+++ +|++.+++|++++++++.++|||+.+++++.++|+.
T Consensus 373 i~~ll----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 373 VLYLL----KHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHHHH----HCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred HHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 97776 799999999999999998899999999999999863
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=353.00 Aligned_cols=363 Identities=15% Similarity=0.192 Sum_probs=265.7
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceee
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 240 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~ 240 (696)
.++|||+++++... |..||.+.++. .+++.|+++||+|+ +++.......-. ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 45689999996433 34589999999 66667799999999 888764332101 1111
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
.. + .++++|+... ..+.. +...+...+.+.+.+. +||+||+|.+.....+.++++..++|+|+
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~~~---~~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VARLR---FGPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC----------------------CCHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------ccccc---ccHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3444443221 11111 1111223344444443 89999999987765577777778999999
Q ss_pred EecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccc
Q 005444 321 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400 (696)
Q Consensus 321 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~ 400 (696)
+.|+..... ..+..+ +. . .+ ..++.+|.++++|....+...+ +++
T Consensus 136 ~~h~~~~~~-----~~~~~~---~~----~-~~-~~~~~~d~ii~~s~~~~~~~~~---------------------~~~ 180 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSVF---QG----I-LR-PYHEKIIGRIAVSDLARRWQME---------------------ALG 180 (406)
T ss_dssp EECCCCCSH-----HHHHHH---HS----T-TH-HHHTTCSEEEESSHHHHHHHHH---------------------HHS
T ss_pred EEcCcchhh-----hhHHHH---HH----H-HH-HHHhhCCEEEECCHHHHHHHHH---------------------hcC
Confidence 999853211 011111 11 1 11 5788999999999887652211 122
Q ss_pred cCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc-cccCChHHHHHHH
Q 005444 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DHVKNMTGLVECY 479 (696)
Q Consensus 401 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL-~~~Kgi~~Llea~ 479 (696)
..++ +||||+|.+.|.+.... .+. ++++++|+|+||+ .+.||++.+++++
T Consensus 181 --~~~~-vi~~~v~~~~~~~~~~~------------------------~~~--~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 181 --SDAV-EIPNGVDVASFADAPLL------------------------DGY--PREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp --SCEE-ECCCCBCHHHHHTCCCC------------------------TTC--SCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred --CCcE-EecCCCChhhcCCCchh------------------------hhc--cCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 4578 99999998766554311 111 2356899999999 9999999999999
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
.++.+..++++|+|+|+++. +.++++++++ .++|.|+| .++..++..+++. +|++|+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~~~-------------~~l~~~~~~~--~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~ 291 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRGDE-------------DELREQAGDL--AGHLRFLG----QVDDATKASAMRS-ADVYCAPHL 291 (406)
T ss_dssp HHHHTTSTTCEEEEESCSCH-------------HHHHHHTGGG--GGGEEECC----SCCHHHHHHHHHH-SSEEEECCC
T ss_pred HHHHHHCCCeEEEEEcCCcH-------------HHHHHHHHhc--cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCC
Confidence 99988888999999998742 4667777776 67899999 7778899999995 999999996
Q ss_pred -CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHh
Q 005444 560 -YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 638 (696)
Q Consensus 560 -~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ 638 (696)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.++++++++++++. +
T Consensus 292 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~ 366 (406)
T 2gek_A 292 GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL----EDDQLRAGYVARASERVH-R 366 (406)
T ss_dssp SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHGG-G
T ss_pred CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999999999999997776 799999999999999997 9
Q ss_pred CCHHHHHHHHHHHHHH
Q 005444 639 YTWKIYSERLMTLAGV 654 (696)
Q Consensus 639 ysw~~~a~~l~~ly~~ 654 (696)
|||+.+++++.++|+.
T Consensus 367 ~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 367 YDWSVVSAQIMRVYET 382 (406)
T ss_dssp GBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999864
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=346.18 Aligned_cols=359 Identities=13% Similarity=0.116 Sum_probs=261.0
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|.... |.....
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~---g~~~~~------- 47 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAF---GRSVHA------- 47 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCC---SCCSCS-------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCC---Cccccc-------
Confidence 8999999753 34599999999 666777999 9999 7775432 111000
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCc----EE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT----QC 319 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip----~v 319 (696)
........... .. .+++.. .+.+ ..+.+.+... +||+||+|++.+ ..+.++++..++| .+
T Consensus 48 --~~~~~~~~~~~---~~-~~~~~~-~~~~-----~~l~~~l~~~---~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 48 --NIEEFDAQTAE---HV-RGLNEQ-GFYY-----SGLSEFIDVH---KPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp --SSEEEEHHHHH---HH-TTCCST-TCCH-----HHHHHHHHHH---CCSEEEEEECHH-HHHHHHHHGGGCCSCCEEE
T ss_pred --ccccCCccccc---cc-cccccc-cchH-----HHHHHHHHhc---CCCEEEEcchHH-HHHHHHHHhccCCCCCcee
Confidence 01111111000 00 011100 1111 1233444433 999999995444 4455555555544 45
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCC--EEEeccHHHHhhcccccccccccccccccccceeec
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH 397 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD--~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~ 397 (696)
...|...... ... ....++.+| .|+++|....+..++ .
T Consensus 112 ~~~~~~~~~~--------~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~--------------------~ 151 (413)
T 3oy2_A 112 LYVDLVSKNI--------REN------------LWWIFSHPKVVGVMAMSKCWISDICN--------------------Y 151 (413)
T ss_dssp EEECCCSBSC--------CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH--------------------T
T ss_pred eeccccchhh--------HHH------------HHHHHhccCCceEEEcCHHHHHHHHH--------------------c
Confidence 5555432211 000 124677888 999999887653211 1
Q ss_pred ccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHH
Q 005444 398 GIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477 (696)
Q Consensus 398 gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle 477 (696)
|+ +.++.+||||+|.+.|.. .. +.+++..+.++++|+++||+.+.||++.+++
T Consensus 152 ~~---~~~~~vi~ngvd~~~~~~---~~---------------------~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~ 204 (413)
T 3oy2_A 152 GC---KVPINIVSHFVDTKTIYD---AR---------------------KLVGLSEYNDDVLFLNMNRNTARKRLDIYVL 204 (413)
T ss_dssp TC---CSCEEECCCCCCCCCCTT---HH---------------------HHTTCGGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred CC---CCceEEeCCCCCHHHHHH---HH---------------------HhcCCCcccCceEEEEcCCCchhcCcHHHHH
Confidence 22 578999999999987711 11 1245422237889999999999999999999
Q ss_pred HHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc-------EEEeccccccCChhHHHHHHHcc
Q 005444 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ-------FRWIAAQTNRARNGELYRYIADT 550 (696)
Q Consensus 478 a~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~-------V~flG~~~~~v~~~el~~~la~a 550 (696)
|+.++.+..++++|+|+|+|+.... ....+.++++++++++.++ |.|.| .++.+++..+|+.
T Consensus 205 a~~~l~~~~~~~~l~ivG~g~~~~~------~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~- 273 (413)
T 3oy2_A 205 AAARFISKYPDAKVRFLCNSHHESK------FDLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDMMYNA- 273 (413)
T ss_dssp HHHHHHHHCTTCCEEEEEECCTTCS------CCHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-
T ss_pred HHHHHHHhCCCcEEEEEeCCcccch------hhHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHHHHHh-
Confidence 9999988889999999999976111 1123678899999999987 77888 7888999999995
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCe---------------EE--EECCCCHHHHHHHHHHH
Q 005444 551 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS---------------GF--HIDPYHPDQAAELMADF 613 (696)
Q Consensus 551 advfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~---------------G~--l~~p~d~e~la~~I~~~ 613 (696)
+|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+ |+ +++++|+++++++| ++
T Consensus 274 adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l 352 (413)
T 3oy2_A 274 CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TF 352 (413)
T ss_dssp CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HH
T ss_pred CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999887 99 99999999999999 88
Q ss_pred HHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 614 FGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 614 l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+ .|++.+++|++++++++.++|||+.++++++++|+.
T Consensus 353 ~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 353 F----KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp T----TSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred h----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 7 799999999999999998899999999999999874
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=329.79 Aligned_cols=311 Identities=15% Similarity=0.102 Sum_probs=243.8
Q ss_pred eeEEEEEccc--------cccCCcccCCCC-CCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCc
Q 005444 163 VFNVVILSPH--------GYFGQANVLGLP-DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT 233 (696)
Q Consensus 163 ~~rI~iis~h--------~~~~~~~~lG~p-~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~ 233 (696)
+|||++++++ .+|.+ | ..||.+.++. +|+++|+++||+|+ +++.......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~------p~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~--- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVP------PQGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG--- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSS------CSSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC---
T ss_pred ccEEEEEeccccccCcccccccC------cccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC---
Confidence 3899999987 32211 2 3599999999 66666789999999 8876632211
Q ss_pred cccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc
Q 005444 234 CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK 313 (696)
Q Consensus 234 ~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~ 313 (696)
..++.+++.+ .+ ..+.+.+.+ .+||+||+|.+.....+ ++.
T Consensus 62 ----------~~~~~~~~~~----------------~~-------~~l~~~l~~---~~~Dvi~~~~~~~~~~~---~~~ 102 (342)
T 2iuy_A 62 ----------RPGLTVVPAG----------------EP-------EEIERWLRT---ADVDVVHDHSGGVIGPA---GLP 102 (342)
T ss_dssp ----------STTEEECSCC----------------SH-------HHHHHHHHH---CCCSEEEECSSSSSCST---TCC
T ss_pred ----------CCcceeccCC----------------cH-------HHHHHHHHh---cCCCEEEECCchhhHHH---Hhh
Confidence 0133333211 00 023333333 38999999997764433 677
Q ss_pred CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccc
Q 005444 314 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 393 (696)
Q Consensus 314 ~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~ 393 (696)
.++| |++.|+..... ..+|.|+++|+...+...
T Consensus 103 ~~~p-v~~~h~~~~~~----------------------------~~~d~ii~~S~~~~~~~~------------------ 135 (342)
T 2iuy_A 103 PGTA-FISSHHFTTRP----------------------------VNPVGCTYSSRAQRAHCG------------------ 135 (342)
T ss_dssp TTCE-EEEEECSSSBC----------------------------SCCTTEEESCHHHHHHTT------------------
T ss_pred cCCC-EEEecCCCCCc----------------------------ccceEEEEcCHHHHHHHh------------------
Confidence 8999 99999864321 018999999988765211
Q ss_pred eeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChH
Q 005444 394 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMT 473 (696)
Q Consensus 394 ~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~ 473 (696)
. ..++.+||||+|.+.|.|.... .+++++|+|+||+.+.||++
T Consensus 136 ------~--~~~~~vi~ngvd~~~~~~~~~~-----------------------------~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 ------G--GDDAPVIPIPVDPARYRSAADQ-----------------------------VAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp ------C--CTTSCBCCCCBCGGGSCCSTTC-----------------------------CCCCSCEEEESCCCGGGTHH
T ss_pred ------c--CCceEEEcCCCChhhcCccccc-----------------------------CCCCCEEEEEeccccccCHH
Confidence 1 4578899999999887664320 23566899999999999999
Q ss_pred HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccE
Q 005444 474 GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGA 553 (696)
Q Consensus 474 ~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadv 553 (696)
.+++++..+ +++|+|+|+|+. .+.+++++++++ ++|+|+| .++..++..+++. +|+
T Consensus 179 ~li~a~~~~-----~~~l~i~G~g~~------------~~~l~~~~~~~~--~~v~~~g----~~~~~~l~~~~~~-adv 234 (342)
T 2iuy_A 179 EAAAFAHAC-----GRRLVLAGPAWE------------PEYFDEITRRYG--STVEPIG----EVGGERRLDLLAS-AHA 234 (342)
T ss_dssp HHHHHHHHH-----TCCEEEESCCCC------------HHHHHHHHHHHT--TTEEECC----CCCHHHHHHHHHH-CSE
T ss_pred HHHHHHHhc-----CcEEEEEeCccc------------HHHHHHHHHHhC--CCEEEec----cCCHHHHHHHHHh-CCE
Confidence 999999987 689999999976 567788888877 7899999 7778899999995 999
Q ss_pred EEeCCC----------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--CCeEEEECCCCHHHHHHHHHHHHHhhhcCH
Q 005444 554 FVQPAF----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASGFHIDPYHPDQAAELMADFFGKCKENP 621 (696)
Q Consensus 554 fV~PS~----------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--g~~G~l~~p~d~e~la~~I~~~l~~l~~dp 621 (696)
+|+||. .|+||++++|||+||+|||+|+.||..|++.+ +.+|+++++ |+++++++|.+++ +
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~----~-- 307 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLP----A-- 307 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSC----C--
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHH----H--
Confidence 999999 89999999999999999999999999999999 999999999 9999999996654 3
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 622 SHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 622 ~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++++++.++|||+.+++++.++|+.
T Consensus 308 ------~~~~~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 308 ------SDEVRRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp ------HHHHHHHHHHHHBHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 678899998999999999999999874
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=313.72 Aligned_cols=346 Identities=10% Similarity=0.008 Sum_probs=226.2
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceee
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 240 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~ 240 (696)
+..|||++++++..|+ ...||.. .+. +|+++|+++||+|+ |+|+..... . .....
T Consensus 44 ~~~mrI~~v~~~~~p~-------~~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-~----~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQE-------HMFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-P----KDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGG-------GCSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-H----HHHGG
T ss_pred CCCceEEEEeCCCCcc-------ccccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-h----HHHHh
Confidence 3469999999988753 1246764 477 67777899999999 999763210 0 00001
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhh-------c
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-------K 313 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~-------~ 313 (696)
+. ..... ++.....+.. .+ ..+... ..... ...+||+||++.|.++..+..+.+ .
T Consensus 99 ~~---~~~~~--~~~~~~~~~~-~i-----~~~~~~-----~~~~~--~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 FK---SFKYV--MPEEDKDFAL-QI-----VPFNDR-----YNRTI--PVAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp GT---TSEEC--CTTCCCCCSE-EE-----EECSCC-----TTCCE--EECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred hh---cccee--eccCCccccc-ee-----eecccc-----ccccc--cCCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 11 11111 1111100000 00 000000 00000 013799999998766555544321 1
Q ss_pred CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCC--EEEeccHHHHhhcccccccccccccccccc
Q 005444 314 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTLPG 391 (696)
Q Consensus 314 ~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD--~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~ 391 (696)
.+.+.+..+|+.+...++... .+ ......+..++ .+|++|....+..++
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------~~------~~~~~~~~~~~~~~vi~~S~~~~~~l~~--------------- 211 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------QY------VLAESTYKYRGPQIAVFNSELLKQYFNN--------------- 211 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------HH------HHHHHTTSCCSCEEEEEESHHHHHHHHH---------------
T ss_pred ccCcEEEEEeechhhcCccCh--------HH------HHHHHHhccCCceEEEEcCHHHHHHHHH---------------
Confidence 356777788876543221110 00 11223455554 588899887653211
Q ss_pred cceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc-cccC
Q 005444 392 LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DHVK 470 (696)
Q Consensus 392 l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL-~~~K 470 (696)
.|++ .+++.++|||+|.+.|.+.. .+ .++++.|+++||+ .+.|
T Consensus 212 -----~g~~--~~~~~~i~~g~d~~~~~~~~--------------------------~~---~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 212 -----KGYN--FTDEYFFQPKINTTLKNYIN--------------------------DK---RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp -----HTCC--CSEEEEECCCCCHHHHTTTT--------------------------SC---CCCCSEEEEEECTTCGGG
T ss_pred -----cCCC--CCceEEeCCCcCchhhcccc--------------------------cc---cCCCCEEEEEecCchhcc
Confidence 1232 35788999999977554310 01 3456788899997 6889
Q ss_pred ChHHHHHHHHHhhccCCC---eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHH
Q 005444 471 NMTGLVECYGKNSQLREL---VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 547 (696)
Q Consensus 471 gi~~Llea~~~l~~~~~~---~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 547 (696)
|++.|++|++.+.+..|+ ++|+|+|+++.. .++++.++|+|+| .++.+++..+|
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-------------------~~l~~~~~v~f~G----~~~~~~l~~~~ 312 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-------------------IALGKGIHLNSLG----KLTLEDYADLL 312 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-------------------EEEETTEEEEEEE----SCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-------------------hhcCCcCcEEEcC----CCCHHHHHHHH
Confidence 999999999999877665 899999998661 3457778999999 67789999999
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 548 a~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
+. ||+||+||.+|+||++++||||||+|||+++ ||..|++.++.+|++++|+|++++|++|.+++ +|++.+++
T Consensus 313 ~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~- 385 (413)
T 2x0d_A 313 KR-SSIGISLMISPHPSYPPLEMAHFGLRVITNK-YENKDLSNWHSNIVSLEQLNPENIAETLVELC----MSFNNRDV- 385 (413)
T ss_dssp HH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHH----HHTC-----
T ss_pred Hh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEeC-CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHH----cCHHHHHH-
Confidence 95 9999999999999999999999999999954 56789999999999999999999999998776 68877766
Q ss_pred HHHHHHHHHHhCCHHHHHHH
Q 005444 628 SDGGLKRIYERYTWKIYSER 647 (696)
Q Consensus 628 ~~~a~~~v~~~ysw~~~a~~ 647 (696)
+|++++ ++|||+...++
T Consensus 386 --~~~~~~-~~~~W~~~~~~ 402 (413)
T 2x0d_A 386 --DKKESS-NMMFYINEFNE 402 (413)
T ss_dssp -----CCB-SCGGGCCCC--
T ss_pred --hHHHHH-HhCCHHHHHHH
Confidence 566665 68999999877
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-31 Score=283.95 Aligned_cols=339 Identities=12% Similarity=0.026 Sum_probs=236.5
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeec
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~ 242 (696)
.|||++++. .+||.+..+. .|+++|+++||+|. ++|...... . +.+.
T Consensus 6 ~mkIl~~~~-------------~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~~ 52 (364)
T 1f0k_A 6 GKRLMVMAG-------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLVP 52 (364)
T ss_dssp -CEEEEECC-------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHGG
T ss_pred CcEEEEEeC-------------CCccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhcc
Confidence 489999972 1378888888 66677799999999 888653110 0 0011
Q ss_pred CCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEe
Q 005444 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 243 ~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~ 322 (696)
..++.+.+++.....+. ..................+.+.+.+. +||+||+|....+..+.++++..++|+|++.
T Consensus 53 -~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 126 (364)
T 1f0k_A 53 -KHGIEIDFIRISGLRGK--GIKALIAAPLRIFNAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 126 (364)
T ss_dssp -GGTCEEEECCCCCCTTC--CHHHHHTCHHHHHHHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEEEEE
T ss_pred -ccCCceEEecCCccCcC--ccHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEEEEe
Confidence 12466666665421110 00000000000111223344444433 8999999987766667778888999999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+... .+ ..++..+.+|.+++++... +
T Consensus 127 ~~~~~--------~~--------------~~~~~~~~~d~v~~~~~~~-------------------------------~ 153 (364)
T 1f0k_A 127 QNGIA--------GL--------------TNKWLAKIATKVMQAFPGA-------------------------------F 153 (364)
T ss_dssp CSSSC--------CH--------------HHHHHTTTCSEEEESSTTS-------------------------------S
T ss_pred cCCCC--------cH--------------HHHHHHHhCCEEEecChhh-------------------------------c
Confidence 87421 00 1224566899999876320 1
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCC-EEEEEccccccCChHHHHHHHHH
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP-IVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~-iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
+ ++.+|+||+|.+.|.+.... +.++. +++++ ++++.|++.+.||.+.+++++.+
T Consensus 154 ~-~~~~i~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~il~~~g~~~~~k~~~~li~a~~~ 208 (364)
T 1f0k_A 154 P-NAEVVGNPVRTDVLALPLPQ----------------------QRLAG--REGPVRVLVVGGSQGARILNQTMPQVAAK 208 (364)
T ss_dssp S-SCEECCCCCCHHHHTSCCHH----------------------HHHTT--CCSSEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred C-CceEeCCccchhhcccchhh----------------------hhccc--CCCCcEEEEEcCchHhHHHHHHHHHHHHH
Confidence 2 57799999998766543211 11333 34455 55566799999999999999999
Q ss_pred hhccCCCeE-EEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC
Q 005444 482 NSQLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560 (696)
Q Consensus 482 l~~~~~~~~-LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 560 (696)
+.+ +++ ++++|+++ .+.+.+++++++++ +|+|+|++ +++..+|+. +|++|+||.
T Consensus 209 l~~---~~~~l~i~G~~~-------------~~~l~~~~~~~~~~-~v~~~g~~------~~~~~~~~~-ad~~v~~sg- 263 (364)
T 1f0k_A 209 LGD---SVTIWHQSGKGS-------------QQSVEQAYAEAGQP-QHKVTEFI------DDMAAAYAW-ADVVVCRSG- 263 (364)
T ss_dssp HGG---GEEEEEECCTTC-------------HHHHHHHHHHTTCT-TSEEESCC------SCHHHHHHH-CSEEEECCC-
T ss_pred hcC---CcEEEEEcCCch-------------HHHHHHHHhhcCCC-ceEEecch------hhHHHHHHh-CCEEEECCc-
Confidence 865 688 56677664 25677888888874 69999954 367888884 999999983
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCCCcc--------hhhccCCeEEEECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q 005444 561 EAFGLTVVEAMTCGLPTFATCHGGPA--------EIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDG 630 (696)
Q Consensus 561 E~fGltvlEAMa~GlPVvat~~gG~~--------EiI~dg~~G~l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~ 630 (696)
|++++|||+||+|||+|+.||.. +++.++ .|++++++| +++++++| .++ |++.+++|+++
T Consensus 264 ---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i----~~l--~~~~~~~~~~~ 333 (364)
T 1f0k_A 264 ---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTL----AGW--SRETLLTMAER 333 (364)
T ss_dssp ---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHH----HTC--CHHHHHHHHHH
T ss_pred ---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHH----Hhc--CHHHHHHHHHH
Confidence 99999999999999999999864 466555 599999988 99999998 455 99999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 631 GLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 631 a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++.+ +.|+|+.++++++++|+.
T Consensus 334 ~~~~~-~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 334 ARAAS-IPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHTC-CTTHHHHHHHHHHHHHTT
T ss_pred HHHhh-ccCHHHHHHHHHHHHHHH
Confidence 99887 689999999999999874
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-31 Score=300.32 Aligned_cols=335 Identities=14% Similarity=0.155 Sum_probs=225.5
Q ss_pred CCCeEEEEeCCCchHHHHHHhh-cCCCcEEEEecCCCccCC----CCCCccHhh--h-----hhhhhccchhhhhHHhhh
Q 005444 291 GFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKY----PDSDIYWKK--F-----DEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~-~~gip~v~t~H~l~~~~~----~~s~~~~~~--~-----~~~y~~~~~~~~e~~a~~ 358 (696)
.+|||+|+|+|..++++.++.. ..+++.|+|+|++...++ ...+.++.. + .....+...+..++.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 6799999999999998888875 458999999999853333 111222210 0 000112223445777889
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhh
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~ 438 (696)
.||.|+|+|+..+.+.+... +. +++. +||||+|.+.|.|...........+..+++.
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll---------------------~r-~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~ 316 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLL---------------------KR-KPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDF 316 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHT---------------------SS-CCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHHh---------------------cC-CCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHH
Confidence 99999999998877544311 11 2232 3999999999999633222111112223222
Q ss_pred cCCccccccccCCCCC-CCCCEEEEEcccc-ccCChHHHHHHHHHhhcc-------CCCeEEEEEeCccCCCC-------
Q 005444 439 LFDPEQNDEHVGTLSD-RSKPIVFSMARLD-HVKNMTGLVECYGKNSQL-------RELVNLVVVAGYIDVNK------- 502 (696)
Q Consensus 439 l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~-~~Kgi~~Llea~~~l~~~-------~~~~~LvIvG~g~~~~~------- 502 (696)
+.+ ....++++ + +++++|+.+||+. ++||++.+++|+.++... ..-+.|+|+..+.....
T Consensus 317 l~~--~~~~~l~l--~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~ 392 (725)
T 3nb0_A 317 VRG--HFHGCFDF--DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQ 392 (725)
T ss_dssp HHH--HTTTCCCS--CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHH
T ss_pred HHh--hcccCCCC--CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcch
Confidence 110 00011233 3 4556777789999 789999999999988643 22367888877643110
Q ss_pred ------------------------------------Cc-chHHHH---------------------------------HH
Q 005444 503 ------------------------------------SK-DREEIA---------------------------------EI 512 (696)
Q Consensus 503 ------------------------------------~~-d~e~~~---------------------------------~~ 512 (696)
.. |.++.- ..
T Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~ 472 (725)
T 3nb0_A 393 AEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDAN 472 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGG
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCc
Confidence 00 111000 11
Q ss_pred HHHHHHHHHcCCCCc------EEEec-cccc--cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 513 EKMHELMKTYKLDGQ------FRWIA-AQTN--RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 513 ~~l~~li~~~~L~~~------V~flG-~~~~--~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
+.+...++++++.++ |.|++ +.++ .+-..++..+++ +||+||+||++|+||++++||||||+|||+|+.|
T Consensus 473 D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~-~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 473 DLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVR-GCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHH-HCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHh-hceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 223344566777665 56664 2221 112236788888 5999999999999999999999999999999999
Q ss_pred CcchhhccC-------CeEEEE---CCCCHHHHHHHHHHHHHhhh-cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 584 GPAEIIEHG-------ASGFHI---DPYHPDQAAELMADFFGKCK-ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 584 G~~EiI~dg-------~~G~l~---~p~d~e~la~~I~~~l~~l~-~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
|+.|+|.++ .+|++| ++.|+++++++|.+++..+. .++..+..|++++++.+ ++|||+.++++|+++|
T Consensus 552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Y 630 (725)
T 3nb0_A 552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKAR 630 (725)
T ss_dssp HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHH
T ss_pred ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Confidence 999999876 369988 45688888888888876555 47888999999998776 7999999999999999
Q ss_pred HH
Q 005444 653 GV 654 (696)
Q Consensus 653 ~~ 654 (696)
+.
T Consensus 631 e~ 632 (725)
T 3nb0_A 631 QL 632 (725)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=299.27 Aligned_cols=242 Identities=12% Similarity=0.051 Sum_probs=180.1
Q ss_pred CCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
+||+||.+....+. ...+++..++|++++.|+..... ... ... .....++.+++.+|.||++|+...
T Consensus 124 ~~DvIh~~~~~~~~-~~~~~~~~~~p~v~~~h~~~~~~---------~~~-~~~--~~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVA-FIELAKRVNPAAKLVYRASDGLS---------TIN-VAS--YIEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGG-GHHHHHHHCTTSEEEEEESSCHH---------HHT-CCH--HHHHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHH-HHHHHHHhCCCEEEEEeccchhh---------ccc-ccH--HHHHHHHHHHHhCCEEEEcCHHHH
Confidence 68999944322222 12455677999999999743200 000 000 011234567899999999998754
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
+. +. .. . ++.+||||+|.+.|.|....
T Consensus 191 ~~----~~------------------~~---~-~i~vipngvd~~~f~~~~~~--------------------------- 217 (406)
T 2hy7_A 191 AE----VV------------------SR---D-NVFHVGHGVDHNLDQLGDPS--------------------------- 217 (406)
T ss_dssp GG----CS------------------CS---T-TEEECCCCBCTTHHHHHCSC---------------------------
T ss_pred HH----HH------------------hc---C-CEEEEcCCcChHhcCccccc---------------------------
Confidence 31 11 01 2 89999999998766432110
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
..+++++|+|+||+.+.||+ ++ .+.+..++++|+|+|+|+ ++++++.++|+|+
T Consensus 218 -~~~~~~~i~~vGrl~~~Kg~---~~---~l~~~~~~~~l~ivG~g~--------------------~~~~~l~~~V~f~ 270 (406)
T 2hy7_A 218 -PYAEGIHAVAVGSMLFDPEF---FV---VASKAFPQVTFHVIGSGM--------------------GRHPGYGDNVIVY 270 (406)
T ss_dssp -SCCSSEEEEEECCTTBCHHH---HH---HHHHHCTTEEEEEESCSS--------------------CCCTTCCTTEEEE
T ss_pred -ccCCCcEEEEEeccccccCH---HH---HHHHhCCCeEEEEEeCch--------------------HHhcCCCCCEEEc
Confidence 02334789999999999999 33 333446899999999874 3456888999999
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHH-------HcCCcEEEcCCCCcchhhccCCeEEE-ECCCCH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM-------TCGLPTFATCHGGPAEIIEHGASGFH-IDPYHP 603 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM-------a~GlPVvat~~gG~~EiI~dg~~G~l-~~p~d~ 603 (696)
| .++.+++..+++. +|+||+||..|+||++++||| +||+|||+|+. +.++.+|++ ++++|+
T Consensus 271 G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 271 G----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNA 339 (406)
T ss_dssp C----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCH
T ss_pred C----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCH
Confidence 9 7778999999995 999999999999999999999 99999999987 667889999 999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
++++++|.+++ +|++ + ...++|||+.++++++++
T Consensus 340 ~~la~ai~~ll----~~~~---------~-~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 340 DSVIAAITQAL----EAPR---------V-RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HHHHHHHHHHH----HCCC---------C-CCSCCCBHHHHHHHHHCG
T ss_pred HHHHHHHHHHH----hCcc---------h-hhhhcCCHHHHHHHHHHh
Confidence 99999998877 5665 1 234789999999999988
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-29 Score=284.36 Aligned_cols=173 Identities=9% Similarity=0.034 Sum_probs=154.3
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEe-CccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG-~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
++.+|+ ++ +++++++||+.+ ||++.+++++.++.+..|+++|+|+| +|+. .+.++++++++|+
T Consensus 368 r~~~~~--~~-~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~------------~~~l~~~~~~~~l 431 (568)
T 2vsy_A 368 RTQCGL--PE-QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEA------------DARLRAFAHAQGV 431 (568)
T ss_dssp TGGGTC--CT-TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTH------------HHHHHHHHHHTTC
T ss_pred ccccCC--CC-CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHH------------HHHHHHHHHHcCC
Confidence 445676 33 346669999999 99999999999998778999999999 6654 6788999999999
Q ss_pred C-CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE-------cCCC-------Ccchhh
Q 005444 525 D-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA-------TCHG-------GPAEII 589 (696)
Q Consensus 525 ~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVva-------t~~g-------G~~EiI 589 (696)
. ++|+|+| .++.+++..+++. +|+||+||.+ +||++++|||+||+|||+ |+.| |+.|+|
T Consensus 432 ~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v 505 (568)
T 2vsy_A 432 DAQRLVFMP----KLPHPQYLARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN 505 (568)
T ss_dssp CGGGEEEEC----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB
T ss_pred ChhHEEeeC----CCCHHHHHHHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh
Confidence 8 9999999 6777899999995 9999999999 999999999999999999 9999 999998
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHH
Q 005444 590 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI--YERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 590 ~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v--~~~ysw~~~a~~l~~ly~~ 654 (696)
.+ |+++++++|.+++ .|++.+++|++++++++ .+.|||+.++++++++|+.
T Consensus 506 ~~----------~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 506 VA----------DDAAFVAKAVALA----SDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp CS----------SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred cC----------CHHHHHHHHHHHh----cCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 54 8999999997776 79999999999999998 6889999999999999874
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=275.59 Aligned_cols=313 Identities=11% Similarity=0.027 Sum_probs=211.0
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+|+||+|++...+++.++++.. ++|++++.|...+ .+. .+..+ .....-...+..+|.+...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp----~~~-~~~~l-------p~~~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFP----TPE-IFNAL-------PTYDTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCC----CHH-HHTTS-------TTHHHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCC----CHH-HHhhC-------ccHHHHHHhhhccCeEEEECHH
Confidence 367999999988777777776654 7999999997422 111 11100 0000011234567877776654
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHH--HHHhhhhcchhhhcCCcccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ--KRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~--~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
.....-.......... ....+. ....| ...++.+||||||.+.|.+..... .... ..++
T Consensus 190 ~~~~f~~~~~~~l~~~-~~~~~~-~~~~g---~~~~v~vip~GID~~~f~~~~~~~~~~~~~--------------~lr~ 250 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRVT-TRSAKS-HTAWG---KAFRTEVYPIGIEPKEIAKQAAGPLPPKLA--------------QLKA 250 (482)
T ss_dssp HHHHHHHHHHHHSCEE-EETTTE-EEETT---EEEEEEECCCCCCHHHHHHHHHSCCCHHHH--------------HHHH
T ss_pred HHHHHHHHHHHHhCCc-cccCCe-EEECC---eEEEEEEEeccCCHHHHHHHhcCcchHHHH--------------HHHH
Confidence 3322110000000000 000000 01111 135789999999998775431100 0000 0112
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
.++ ++++|+++||+++.||++.+++|++++.+.+| +++|+++|++.. ....+..+..+++.+++.+++
T Consensus 251 ~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~---~~~~~~~~l~~~l~~l~~~in 322 (482)
T 1uqt_A 251 ELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRHQLENEAGRIN 322 (482)
T ss_dssp HTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHHHHHHHHHHHH
T ss_pred HhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc---cchHHHHHHHHHHHHHHHHHh
Confidence 232 57899999999999999999999999876665 478999997432 111223344566666666543
Q ss_pred ----CC--CcEEE-eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCCCCcchhhcc
Q 005444 524 ----LD--GQFRW-IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEIIEH 591 (696)
Q Consensus 524 ----L~--~~V~f-lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVvat~~gG~~EiI~d 591 (696)
.. ..|+| .| .++.+++..+|+ +||+||+||.+||||++++|||+||+ |+|+|+.+|..+.+.
T Consensus 323 ~~~g~~~~~~v~~~~g----~v~~~el~~ly~-~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~- 396 (482)
T 1uqt_A 323 GKYGQLGWTPLYYLNQ----HFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT- 396 (482)
T ss_dssp HHHCBTTBCSEEEECS----CCCHHHHHHHHH-HCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT-
T ss_pred hhcccCCCceEEEeCC----CCCHHHHHHHHH-HccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC-
Confidence 22 13665 45 788899999999 59999999999999999999999997 999999888888882
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+|++++|.|++++|++|.+++. .+++.++++++++++++ ++|||+.+++++++.|+.
T Consensus 397 --~g~lv~p~d~~~lA~ai~~lL~---~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 397 --SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQ 453 (482)
T ss_dssp --TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred --CeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHh
Confidence 7999999999999999988772 36788999999999998 569999999999999864
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=270.55 Aligned_cols=284 Identities=14% Similarity=0.133 Sum_probs=200.7
Q ss_pred HHHHHHHHHhCCCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhh
Q 005444 280 DVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 280 ~~~~~i~~~~~~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
.+.+.+.+. +||+||+|... .++.+.++++..++|++++.|+... + . .|..+.. ........+
T Consensus 86 ~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~---~-~~~~~~~-------~~~~~~~~~ 149 (375)
T 3beo_A 86 GLDKVMKEA---KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--W---D-KYSPYPE-------EMNRQLTGV 149 (375)
T ss_dssp HHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--S---C-TTSSTTH-------HHHHHHHHH
T ss_pred HHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--c---c-ccCCChh-------HhhhhHHhh
Confidence 344444443 89999998753 4566677888899999988776521 1 0 0000000 011222345
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC-CcCCCCCCCchHHHHHhhhhcchhh
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQ 437 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~~~~ 437 (696)
.+|.++++|+...+...+ .|++ ..++.+|+|| +|...+.+.......
T Consensus 150 ~~d~ii~~s~~~~~~~~~--------------------~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~---------- 197 (375)
T 3beo_A 150 MADLHFSPTAKSATNLQK--------------------ENKD--ESRIFITGNTAIDALKTTVKETYSHP---------- 197 (375)
T ss_dssp HCSEEEESSHHHHHHHHH--------------------TTCC--GGGEEECCCHHHHHHHHHCCSSCCCH----------
T ss_pred hhheeeCCCHHHHHHHHH--------------------cCCC--cccEEEECChhHhhhhhhhhhhhhHH----------
Confidence 599999999887552110 1332 5689999999 787655332100000
Q ss_pred hcCCccccccccCCCCCCCCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHH
Q 005444 438 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 516 (696)
Q Consensus 438 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~ 516 (696)
.++.+ ++++.+++++||+.+. ||++.+++|+.++.+..|++++++ |+|++ . ...+.++
T Consensus 198 -------~~~~~----~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~------~---~~~~~~~ 256 (375)
T 3beo_A 198 -------VLEKL----GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN------P---VVRETAN 256 (375)
T ss_dssp -------HHHTT----TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC------H---HHHHHHH
T ss_pred -------HHHhc----cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC------H---HHHHHHH
Confidence 00111 2344578899999886 999999999999987778898654 65544 0 1122333
Q ss_pred HHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCcchhhccCCeE
Q 005444 517 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASG 595 (696)
Q Consensus 517 ~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~~EiI~dg~~G 595 (696)
+++ +..++|+|+| .++..++..+|+. +|++|.|| |.+++|||+||+|||+|+ .||..|++.++ +|
T Consensus 257 ~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g 322 (375)
T 3beo_A 257 DIL---GDYGRIHLIE----PLDVIDFHNVAAR-SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TL 322 (375)
T ss_dssp HHH---TTCTTEEEEC----CCCHHHHHHHHHT-CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SE
T ss_pred HHh---hccCCEEEeC----CCCHHHHHHHHHh-CcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ce
Confidence 332 3346899998 5666789999995 99999998 777999999999999996 59999999888 99
Q ss_pred EEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 596 ~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+++++ |+++++++|.+++ +|++.+++|+++++++. +.|+|+.+++.+.+++
T Consensus 323 ~~v~~-d~~~la~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 323 KLAGT-DEETIFSLADELL----SDKEAHDKMSKASNPYG-DGRASERIVEAILKHF 373 (375)
T ss_dssp EECCS-CHHHHHHHHHHHH----HCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHT
T ss_pred EEcCC-CHHHHHHHHHHHH----hChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHh
Confidence 99987 9999999997776 79999999999998876 6899999999998875
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=265.74 Aligned_cols=292 Identities=11% Similarity=0.083 Sum_probs=203.1
Q ss_pred HHHHHHHHHhCCCCeEEEEeCC-CchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhh
Q 005444 280 DVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 280 ~~~~~i~~~~~~~pDvIh~h~~-~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
.+.+.+.+. +||+||+|.. ..++.+.++++..++|++++.|++.... .|..+.. .....+..+
T Consensus 77 ~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~~~-------~~~~~~~~~ 140 (384)
T 1vgv_A 77 GLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPWPE-------EANRTLTGH 140 (384)
T ss_dssp HHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSSTTH-------HHHHHHHHT
T ss_pred HHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCCch-------HhhHHHHHh
Confidence 344444443 8999999976 4456667778889999999988763211 0100000 001112345
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchH--HHHHhhhhcch
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEK--QKRLTALHGSI 435 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~--~~r~~~~~~~~ 435 (696)
.+|.++++|+...+... ..|++ ..++.+++||+ |...+.+.... ....
T Consensus 141 ~~d~ii~~s~~~~~~l~--------------------~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~~~~------- 191 (384)
T 1vgv_A 141 LAMYHFSPTETSRQNLL--------------------RENVA--DSRIFITGNTVIDALLWVRDQVMSSDKLR------- 191 (384)
T ss_dssp TCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHHHHTTTCHHHH-------
T ss_pred hccEEEcCcHHHHHHHH--------------------HcCCC--hhhEEEeCChHHHHHHhhhhccccchhhh-------
Confidence 69999999987654211 01332 56899999995 43221110000 0000
Q ss_pred hhhcCCccccccccC-CCCCC-CCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHH
Q 005444 436 EQLLFDPEQNDEHVG-TLSDR-SKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEI 512 (696)
Q Consensus 436 ~~~l~~~~~~~~~~g-~l~~~-~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~ 512 (696)
.+.++.+| + ++ ++.+++++||+.+. ||++.+++|+.++.+..++++|+++++... ...
T Consensus 192 -------~~~~~~~~~~--~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----------~~~ 252 (384)
T 1vgv_A 192 -------SELAANYPFI--DPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVR 252 (384)
T ss_dssp -------HHHHTTCTTC--CTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHH
T ss_pred -------HHHHHhcccc--CCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----------HHH
Confidence 01112344 3 33 34578899999986 999999999999987778999988644211 123
Q ss_pred HHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhcc
Q 005444 513 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEH 591 (696)
Q Consensus 513 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~d 591 (696)
+.+++++. ..++|+|+| .++..++..+|+. ||+||.|| |.+++|||+||+|||+|+. ||..|++.+
T Consensus 253 ~~l~~~~~---~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~ 319 (384)
T 1vgv_A 253 EPVNRILG---HVKNVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA 319 (384)
T ss_dssp HHHHHHHT---TCTTEEEEC----CCCHHHHHHHHHH-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH
T ss_pred HHHHHHhh---cCCCEEEeC----CCCHHHHHHHHHh-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhC
Confidence 44555443 236899988 5556799999995 99999999 4458999999999999986 999999988
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
| +|+++++ |+++++++|.+++ +||+.+++|+++++++. +.|+|+.+++.+.++|+..
T Consensus 320 g-~g~lv~~-d~~~la~~i~~ll----~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 376 (384)
T 1vgv_A 320 G-TVRLVGT-DKQRIVEEVTRLL----KDENEYQAMSRAHNPYG-DGQACSRILEALKNNRISL 376 (384)
T ss_dssp T-SEEEECS-SHHHHHHHHHHHH----HCHHHHHHHHSSCCTTC-CSCHHHHHHHHHHHTCCCC
T ss_pred C-ceEEeCC-CHHHHHHHHHHHH----hChHHHhhhhhccCCCc-CCCHHHHHHHHHHHHHHhh
Confidence 8 9999988 9999999997776 79999999999998775 7899999999999877543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=233.95 Aligned_cols=187 Identities=17% Similarity=0.222 Sum_probs=160.5
Q ss_pred ecCCCcCCCCC--CCch-----HHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEcccc-ccCChHHHHHHHH
Q 005444 409 VSPGADMDIYF--PYSE-----KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYG 480 (696)
Q Consensus 409 IpnGvD~~~f~--p~~~-----~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~Llea~~ 480 (696)
||||+|.+.|. |... ... .++.+|+ +++++|+|+||+. +.||++.+++++.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~------------------~r~~~~~---~~~~~i~~~G~~~~~~K~~~~li~a~~ 60 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKS------------------LLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIE 60 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHH------------------HHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHH
T ss_pred CCCccChhhccccccccchhhHHHH------------------HHHHcCC---CCCCEEEEeeccccccCCHHHHHHHHH
Confidence 79999999998 7652 111 1233665 3456999999999 9999999999999
Q ss_pred Hhh--ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-eccccccCChhHHHHHHHccccEEEeC
Q 005444 481 KNS--QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQTNRARNGELYRYIADTKGAFVQP 557 (696)
Q Consensus 481 ~l~--~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f-lG~~~~~v~~~el~~~la~aadvfV~P 557 (696)
.+. +..++++|+|+|++.. +..+.+++++++++ +|+| +| .++.+++..+++. +|++|+|
T Consensus 61 ~l~~~~~~~~~~l~i~G~~~~----------~~~~~l~~~~~~~~---~v~~~~g----~~~~~~~~~~~~~-ad~~l~p 122 (200)
T 2bfw_A 61 ILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG---NVKVITE----MLSREFVRELYGS-VDFVIIP 122 (200)
T ss_dssp HHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHHCT---TEEEECS----CCCHHHHHHHHTT-CSEEEEC
T ss_pred HHHhhccCCCeEEEEECCCCh----------HHHHHHHHHHHhcC---CEEEEec----cCCHHHHHHHHHH-CCEEEEC
Confidence 997 6678999999999862 22677888898887 8999 99 7778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhc-CHHHHHHHHHHHHHHHH
Q 005444 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIY 636 (696)
Q Consensus 558 S~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~-dp~~~~~m~~~a~~~v~ 636 (696)
|.+|+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ . |++.+++|++++++++.
T Consensus 123 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 123 SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999997776 7 99999999999999997
Q ss_pred HhCC
Q 005444 637 ERYT 640 (696)
Q Consensus 637 ~~ys 640 (696)
+ ||
T Consensus 198 ~-fs 200 (200)
T 2bfw_A 198 S-FS 200 (200)
T ss_dssp H-TC
T ss_pred h-cC
Confidence 7 86
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=219.77 Aligned_cols=163 Identities=15% Similarity=0.193 Sum_probs=141.7
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+++|+|+||+.+.||++.+++++..++ ..++++|+|+|+|+. .+.++++++++++ +|.| |
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~--~v~~-g---- 61 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD------------EKKIKLLAQKLGV--KAEF-G---- 61 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT------------HHHHHHHHHHHTC--EEEC-C----
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc------------HHHHHHHHHHcCC--eEEE-e----
Confidence 468999999999999999999999985 348999999999877 6788899999887 7999 9
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-cEEE-cCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFA-TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVva-t~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.++.+++..+++. +|++|+||.+|+||++++|||+||+ |||+ ++.||..+++.++.+ +++++|+++++++|.+++
T Consensus 62 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 62 FVNSNELLEILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 6778999999995 9999999999999999999999998 9999 578899999987655 789999999999997776
Q ss_pred HhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 005444 615 GKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647 (696)
Q Consensus 615 ~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~ 647 (696)
.|++.+++|++++++++ ++|||+.++++
T Consensus 139 ----~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 139 ----ENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp ----HCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred ----hCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 79999999999999998 89999998764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-25 Score=246.63 Aligned_cols=320 Identities=12% Similarity=0.070 Sum_probs=221.7
Q ss_pred HHHHHHHHhC-CCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhh
Q 005444 281 VGSEITAELQ-GFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 281 ~~~~i~~~~~-~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
.+..+....+ ..-|+|..|+....+++..+.++ .+.++.+..|.-. |.+.+ |..+... ....-...+-
T Consensus 137 fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPf----Ps~e~-f~~Lp~~-----~r~ell~gll 206 (496)
T 3t5t_A 137 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPW----PSADY-WRILPKE-----IRTGILHGML 206 (496)
T ss_dssp HHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCC----CCHHH-HTTSCHH-----HHHHHHHHHT
T ss_pred HHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCC----CCHHH-HhhCcHh-----HHHHHHHHHH
Confidence 3344444333 35689999999988888877664 4688999999642 32221 1111000 0011134688
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccce--eecccccC--CCcEEEecCCCcCCCCCCCchHHHHHhhhhcc
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR--VVHGIDVF--DPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 434 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~--~~~gi~~~--~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 434 (696)
.+|.|.+.|+..+...-+.... .+|++-. ...++... ..++.++|+|||.+.|.+......
T Consensus 207 ~~DligF~t~~y~~~Fl~~~~r-------~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~-------- 271 (496)
T 3t5t_A 207 PATTIGFFADRWCRNFLESVAD-------LLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLP-------- 271 (496)
T ss_dssp TSSEEEESSHHHHHHHHHHHHH-------HCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCC--------
T ss_pred hCCEEEEecHHHHHHHHHHHHH-------HhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHH--------
Confidence 9999999998776532221110 1111000 00011111 237889999999999977532100
Q ss_pred hhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC---eEEEEEeCccCCCCCcchHHHHH
Q 005444 435 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL---VNLVVVAGYIDVNKSKDREEIAE 511 (696)
Q Consensus 435 ~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~---~~LvIvG~g~~~~~~~d~e~~~~ 511 (696)
...++.+| ++++|+++||+++.||+..+++|| ++.+.+|+ +.|++||.... ....+..+.
T Consensus 272 --------~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr---~~~~~y~~l 334 (496)
T 3t5t_A 272 --------EGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR---LYVPANADY 334 (496)
T ss_dssp --------TTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC---TTSHHHHHH
T ss_pred --------HHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC---CCchHHHHH
Confidence 11122233 578999999999999999999999 88766665 67888885422 112344455
Q ss_pred HHHHHHHHHHcCCC---CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC---CcEEEcCCCCc
Q 005444 512 IEKMHELMKTYKLD---GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG---LPTFATCHGGP 585 (696)
Q Consensus 512 ~~~l~~li~~~~L~---~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G---lPVvat~~gG~ 585 (696)
.+++.+++.+.+.. ..|+|+| .++.+++..+|+ +||+||+||.+||||++++|||+|| .|+|+|..+|.
T Consensus 335 ~~~l~~lv~~in~~~g~~~V~f~g----~v~~~el~aly~-~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa 409 (496)
T 3t5t_A 335 VHRVETAVAEANAELGSDTVRIDN----DNDVNHTIACFR-RADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA 409 (496)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEE----CCCHHHHHHHHH-HCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT
T ss_pred HHHHHHHHHHhccccCCcCEEEeC----CCCHHHHHHHHH-hccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC
Confidence 66677777665321 1699998 678899999999 5999999999999999999999997 89999999999
Q ss_pred chhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 586 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 586 ~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.+ +.+|++++|.|++++|++|.+++. .+++.++++.++.++++ .++++...++.+++-++
T Consensus 410 ~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 410 AEVL--GEYCRSVNPFDLVEQAEAISAALA---AGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGLA 471 (496)
T ss_dssp HHHH--GGGSEEECTTBHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHHH
T ss_pred HHHh--CCCEEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHh
Confidence 9988 347999999999999999988873 56788899999999998 88999999999887664
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-25 Score=236.16 Aligned_cols=269 Identities=13% Similarity=0.103 Sum_probs=180.2
Q ss_pred CCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.+||+||+|.... ++.+.++++..++|++++.|+... +. .+.... ......+..+.+|.++++|..
T Consensus 90 ~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--~~----~~~~~~-------~~~~~~~~~~~~~~~~~~s~~ 156 (376)
T 1v4v_A 90 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--GN----LKEPFP-------EEANRRLTDVLTDLDFAPTPL 156 (376)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--SC----TTSSTT-------HHHHHHHHHHHCSEEEESSHH
T ss_pred cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc--cc----ccCCCc-------hHHHHHHHHHHhceeeCCCHH
Confidence 4899999997643 455677888899998754443311 10 000000 001123345679999999987
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..+...+ .|++ +.++.+++|++ |...+.+ .+ + +.++.
T Consensus 157 ~~~~l~~--------------------~g~~--~~ki~vi~n~~~d~~~~~~-----~~-----~----------~~~~~ 194 (376)
T 1v4v_A 157 AKANLLK--------------------EGKR--EEGILVTGQTGVDAVLLAA-----KL-----G----------RLPEG 194 (376)
T ss_dssp HHHHHHT--------------------TTCC--GGGEEECCCHHHHHHHHHH-----HH-----C----------CCCTT
T ss_pred HHHHHHH--------------------cCCC--cceEEEECCchHHHHhhhh-----hh-----h----------HHHHh
Confidence 6542110 1332 56899999965 4221100 00 0 01111
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEE-eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIv-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
+ ++++++++++||+...||++.+++|+.++.+..|+++|+++ |+++. ..+.+++++.. .++
T Consensus 195 ~----~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~-----------~~~~l~~~~~~---~~~ 256 (376)
T 1v4v_A 195 L----PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPV-----------VREAVFPVLKG---VRN 256 (376)
T ss_dssp C----CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHH-----------HHHHHHHHHTT---CTT
T ss_pred c----CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHH-----------HHHHHHHHhcc---CCC
Confidence 1 23445778899998889999999999999877788999886 54431 23455555432 458
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCHHHH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQA 606 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~e~l 606 (696)
|+|+| .+...++..+|+. ||+||.|| + |+ ++|||+||+|||++ +.||..+++.++ +|++++ .|++++
T Consensus 257 v~~~g----~~g~~~~~~~~~~-ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~l 324 (376)
T 1v4v_A 257 FVLLD----PLEYGSMAALMRA-SLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGV 324 (376)
T ss_dssp EEEEC----CCCHHHHHHHHHT-EEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHH
T ss_pred EEEEC----CCCHHHHHHHHHh-CcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHH
Confidence 99997 4555688999994 99999998 3 44 88999999999998 679999988655 899996 499999
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 607 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 607 a~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++|.+++ .|++.+++|++++ +.|.|...++++.+++.
T Consensus 325 a~~i~~ll----~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~ 362 (376)
T 1v4v_A 325 YRVVKGLL----ENPEELSRMRKAK-----NPYGDGKAGLMVARGVA 362 (376)
T ss_dssp HHHHHHHH----TCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHH----hChHhhhhhcccC-----CCCCCChHHHHHHHHHH
Confidence 99997776 8999999998643 44565555555555543
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-23 Score=226.13 Aligned_cols=206 Identities=11% Similarity=0.118 Sum_probs=157.7
Q ss_pred HhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcc
Q 005444 355 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 434 (696)
Q Consensus 355 ~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 434 (696)
..++.+|.|++.|+..++...+ .|+ + ++.+|+||. |.+.....
T Consensus 149 ~~~~~~d~ii~~S~~~~~~l~~--------------------~g~---~-ki~vi~n~~----f~~~~~~~--------- 191 (374)
T 2xci_A 149 ILSKKFDLIIMRTQEDVEKFKT--------------------FGA---K-RVFSCGNLK----FICQKGKG--------- 191 (374)
T ss_dssp HHHTTCSEEEESCHHHHHHHHT--------------------TTC---C-SEEECCCGG----GCCCCCSC---------
T ss_pred HHHHhCCEEEECCHHHHHHHHH--------------------cCC---C-eEEEcCCCc----cCCCcChh---------
Confidence 4678999999999987653211 122 3 899999973 22211000
Q ss_pred hhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHH
Q 005444 435 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 514 (696)
Q Consensus 435 ~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~ 514 (696)
. .-.++++++.|+ ..||++.|++|+.++.+..|+++|+|+|+|++ ..++
T Consensus 192 ------------~------~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-----------~~~~ 240 (374)
T 2xci_A 192 ------------I------KLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-----------NAKI 240 (374)
T ss_dssp ------------C------CCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-----------GHHH
T ss_pred ------------h------hhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-----------HHHH
Confidence 0 011266776665 46899999999999988889999999998875 1246
Q ss_pred HHHHHHHcCCC--------CcEEEeccccccCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEc-CCCC
Q 005444 515 MHELMKTYKLD--------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGG 584 (696)
Q Consensus 515 l~~li~~~~L~--------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat-~~gG 584 (696)
++++++++++. ++|.+.|. .+++..+|+ .+|++++||. .|++|++++|||+||+|||++ +.+|
T Consensus 241 l~~~~~~~gl~~~~~~~~~~~v~~~~~------~~dl~~~y~-~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~ 313 (374)
T 2xci_A 241 FEKKARDFGFKTSFFENLEGDVILVDR------FGILKELYP-VGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHK 313 (374)
T ss_dssp HHHHHHHTTCCEEETTCCCSSEEECCS------SSCHHHHGG-GEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTT
T ss_pred HHHHHHHCCCceEEecCCCCcEEEECC------HHHHHHHHH-hCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccC
Confidence 88889998886 46888773 246889999 4999888765 477899999999999999986 7899
Q ss_pred cchhhccC-CeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 585 PAEIIEHG-ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 585 ~~EiI~dg-~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
+.|++.+. .+|++++++|+++++++|.+++ +| +.+++|+++|++++.+++.
T Consensus 314 ~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 314 VNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp SHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHhccc
Confidence 99988763 5788888999999999998777 68 8999999999999866443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-24 Score=205.77 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=133.8
Q ss_pred CCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH--HcCCCCcEEEe
Q 005444 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK--TYKLDGQFRWI 531 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~--~~~L~~~V~fl 531 (696)
+.++++|+|+||+.+.||++.+++++.++ ++++|+|+|++.. .+.++++++ ++++.++|.|+
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~------------~~~l~~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK------------GDHAERYARKIMKIAPDNVKFL 83 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT------------TSTHHHHHHHHHHHSCTTEEEE
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc------------HHHHHHHHHhhhcccCCcEEEe
Confidence 67788999999999999999999999987 5799999999876 345777777 77889999999
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~ 611 (696)
| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ +.|+++++++|.
T Consensus 84 g----~~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~ 157 (177)
T 2f9f_A 84 G----SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMK 157 (177)
T ss_dssp E----SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHH
Confidence 9 7788999999995 999999999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHhhhcCHHH-HHHHHHH
Q 005444 612 DFFGKCKENPSH-WKKISDG 630 (696)
Q Consensus 612 ~~l~~l~~dp~~-~~~m~~~ 630 (696)
+++ +|++. ++.++++
T Consensus 158 ~l~----~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 158 KVS----KNPDKFKKDCFRR 173 (177)
T ss_dssp HHH----HCTTTTHHHHHHH
T ss_pred HHH----hCHHHHHHHHHHH
Confidence 776 67764 4434333
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5e-20 Score=201.23 Aligned_cols=162 Identities=12% Similarity=0.069 Sum_probs=127.1
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+++.++++.|++. .|+.+.+.+++..+.+. ++++++++++.... +.+. ++.++|++.|+
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~-----------~~l~------~~~~~v~~~~~- 299 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDV-----------SGLG------EVPANVRLESW- 299 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCC-----------TTCC------CCCTTEEEESC-
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCCh-----------hhhc------cCCCcEEEeCC-
Confidence 4455678889986 77888888888877654 57777776654300 0111 35678999994
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CHHHHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAAE 608 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~e~la~ 608 (696)
++ +..+++ .+|+||.++ .+.+++|||+||+|+|++..++ ..+.+.+++.|++++++ |++++++
T Consensus 300 ---~~---~~~~l~-~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ 368 (412)
T 3otg_A 300 ---VP---QAALLP-HVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSG 368 (412)
T ss_dssp ---CC---HHHHGG-GCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHH
T ss_pred ---CC---HHHHHh-cCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHH
Confidence 32 567777 599999875 3489999999999999976654 78888888899999987 8999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|.+++ +||+.+++|++.+++.. +.++|+.+++.+++++.
T Consensus 369 ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 369 AAKRLL----AEESYRAGARAVAAEIA-AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHH----HCHHHHHHHHHHHHHHH-HSCCHHHHHTTHHHHHC
T ss_pred HHHHHH----hCHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHhc
Confidence 997776 79999999999998876 78899999999999874
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=193.88 Aligned_cols=247 Identities=12% Similarity=0.066 Sum_probs=172.0
Q ss_pred CCCCeEEEEeCCCch---HHHHHHhh--cCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEE
Q 005444 290 QGFPDFIIGNYSDGN---LVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 364 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~---l~a~lla~--~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 364 (696)
-.++|+|+.+++... ..+.++.+ +.++|+|+.+|++++..+. ...+ . ...|...++.||.||
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~---------~~~~--~--~~~E~~~y~~aD~Ii 138 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS---------GNFY--L--MDRTIAYYNKADVVV 138 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG---------GGGG--G--HHHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc---------cchh--h--HHHHHHHHHHCCEEE
Confidence 458999998877641 22344444 4599999999998664321 1111 1 124788999999999
Q ss_pred eccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccc
Q 005444 365 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 444 (696)
Q Consensus 365 t~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 444 (696)
+.|+...+... ..|++ ..++.++++. |... +..
T Consensus 139 ~~S~~~~~~l~--------------------~~G~~--~~ki~~~~~~-~~~~--~~~---------------------- 171 (339)
T 3rhz_A 139 APSQKMIDKLR--------------------DFGMN--VSKTVVQGMW-DHPT--QAP---------------------- 171 (339)
T ss_dssp ESCHHHHHHHH--------------------HTTCC--CSEEEECCSC-CCCC--CCC----------------------
T ss_pred ECCHHHHHHHH--------------------HcCCC--cCceeecCCC-CccC--ccc----------------------
Confidence 99998765221 12332 3565444332 2110 100
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
... +.++++|+|+|++.+...+..+ .++++|+|+|+|++ . .+
T Consensus 172 ----~~~--~~~~~~i~yaG~l~k~~~L~~l----------~~~~~f~ivG~G~~------------~----------~l 213 (339)
T 3rhz_A 172 ----MFP--AGLKREIHFPGNPERFSFVKEW----------KYDIPLKVYTWQNV------------E----------LP 213 (339)
T ss_dssp ----CCC--CEEEEEEEECSCTTTCGGGGGC----------CCSSCEEEEESCCC------------C----------CC
T ss_pred ----ccc--cCCCcEEEEeCCcchhhHHHhC----------CCCCeEEEEeCCcc------------c----------Cc
Confidence 000 3356789999999964333221 37899999999987 1 24
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCC-------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
. +|.|+| .++.+++..+++. +|+.+++.. ...+|.++.||||||+|||+++.|+..+++.++.+|+.
T Consensus 214 ~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWI 287 (339)
T ss_dssp T-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEE
T ss_pred C-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEE
Confidence 4 899999 7889999999984 677776511 12468999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
++ +.++++++|.. -+++.+++|++++++.. ++++|..++++.+
T Consensus 288 ~~--~~~e~~~~i~~------l~~~~~~~m~~na~~~a-~~~~~~~f~k~~l 330 (339)
T 3rhz_A 288 VK--DVEEAIMKVKN------VNEDEYIELVKNVRSFN-PILRKGFFTRRLL 330 (339)
T ss_dssp ES--SHHHHHHHHHH------CCHHHHHHHHHHHHHHT-HHHHTTHHHHHHH
T ss_pred eC--CHHHHHHHHHH------hCHHHHHHHHHHHHHHH-HHhhccHHHHHHH
Confidence 97 58888888854 25778999999999875 5566666655544
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.4e-18 Score=181.94 Aligned_cols=345 Identities=14% Similarity=0.046 Sum_probs=203.8
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
|..||+|.+- -|||-..-.+ .++++|+++||+|. ++|... |.. .+.+
T Consensus 1 M~~~i~i~~G-------------GTgGHi~pal--------ala~~L~~~g~~V~----~vg~~~----g~e----~~~v 47 (365)
T 3s2u_A 1 MKGNVLIMAG-------------GTGGHVFPAL--------ACAREFQARGYAVH----WLGTPR----GIE----NDLV 47 (365)
T ss_dssp --CEEEEECC-------------SSHHHHHHHH--------HHHHHHHHTTCEEE----EEECSS----STH----HHHT
T ss_pred CCCcEEEEcC-------------CCHHHHHHHH--------HHHHHHHhCCCEEE----EEECCc----hHh----hchh
Confidence 5567877541 2567544444 67788899999998 776432 110 0001
Q ss_pred cCCCceEEEEecccCcccccccccccCCC-cccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 242 SGTEHTHILRVPFRSEKGILRQWISRFDV-WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~~~~~~~~wisr~~i-~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
+ ..+..+..+|..+..+. ........ +..+ .-...+.+.+.+. +||+|+++....+..+.++++.+|+|+++
T Consensus 48 ~-~~g~~~~~i~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~l~~~---~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 48 P-KAGLPLHLIQVSGLRGK--GLKSLVKAPLELL-KSLFQALRVIRQL---RPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp G-GGTCCEEECC----------------CHHHHH-HHHHHHHHHHHHH---CCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred h-hcCCcEEEEECCCcCCC--CHHHHHHHHHHHH-HHHHHHHHHHHhc---CCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 1 12344445554322110 00011111 1111 1112233344443 99999999888777788889999999885
Q ss_pred EecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccc
Q 005444 321 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400 (696)
Q Consensus 321 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~ 400 (696)
.-.+... .+ +.++..+.++.|.+..+...
T Consensus 121 he~n~~~--------G~--------------~nr~l~~~a~~v~~~~~~~~----------------------------- 149 (365)
T 3s2u_A 121 HEQNAVA--------GT--------------ANRSLAPIARRVCEAFPDTF----------------------------- 149 (365)
T ss_dssp EECSSSC--------CH--------------HHHHHGGGCSEEEESSTTSS-----------------------------
T ss_pred Eecchhh--------hh--------------HHHhhccccceeeecccccc-----------------------------
Confidence 3322110 00 11234556787766543210
Q ss_pred cCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCE-EEEEccccccCChHHHHHHH
Q 005444 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECY 479 (696)
Q Consensus 401 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~~Kgi~~Llea~ 479 (696)
....+..++.|.+..+.+.+... ..+. +++++. +++.|++...+..+.+.+++
T Consensus 150 ~~~~k~~~~g~pvr~~~~~~~~~------------------------~~~~--~~~~~~ilv~gGs~g~~~~~~~~~~al 203 (365)
T 3s2u_A 150 PASDKRLTTGNPVRGELFLDAHA------------------------RAPL--TGRRVNLLVLGGSLGAEPLNKLLPEAL 203 (365)
T ss_dssp CC---CEECCCCCCGGGCCCTTS------------------------SCCC--TTSCCEEEECCTTTTCSHHHHHHHHHH
T ss_pred cCcCcEEEECCCCchhhccchhh------------------------hccc--CCCCcEEEEECCcCCccccchhhHHHH
Confidence 01446677788777655433211 1232 444554 55667888888888888998
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
..+... .++.++++++..+ .+.+.+..++.+. ++.+.++.. ++..+|+ +||++|.-+
T Consensus 204 ~~l~~~-~~~~vi~~~G~~~------------~~~~~~~~~~~~~--~~~v~~f~~------dm~~~l~-~aDlvI~ra- 260 (365)
T 3s2u_A 204 AQVPLE-IRPAIRHQAGRQH------------AEITAERYRTVAV--EADVAPFIS------DMAAAYA-WADLVICRA- 260 (365)
T ss_dssp HTSCTT-TCCEEEEECCTTT------------HHHHHHHHHHTTC--CCEEESCCS------CHHHHHH-HCSEEEECC-
T ss_pred Hhcccc-cceEEEEecCccc------------cccccceeccccc--ccccccchh------hhhhhhc-cceEEEecC-
Confidence 877543 3455555544433 3445555566554 577788544 4778888 499999753
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCc--------chhhccCCeEEEECCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGP--------AEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISD 629 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~--------~EiI~dg~~G~l~~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~ 629 (696)
-++|+.|+|++|+|+|....+.. ++.+.+.+.|++++.. +++.++++|.+++ .||+.+++|++
T Consensus 261 ---G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll----~d~~~~~~m~~ 333 (365)
T 3s2u_A 261 ---GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVL----MHPETLRSMAD 333 (365)
T ss_dssp ---CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH----HCTHHHHHHHH
T ss_pred ---CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHH----CCHHHHHHHHH
Confidence 47899999999999998866542 3456677789998765 5889999997776 89999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 630 GGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 630 ~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++.. .....+.+++.++++.+.
T Consensus 334 ~a~~~~-~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 334 QARSLA-KPEATRTVVDACLEVARG 357 (365)
T ss_dssp HHHHTC-CTTHHHHHHHHHHHHC--
T ss_pred HHHhcC-CccHHHHHHHHHHHHHcc
Confidence 998765 455677888888877553
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-18 Score=186.32 Aligned_cols=162 Identities=11% Similarity=0.047 Sum_probs=119.3
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEE-EEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~L-vIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.++++++|++. .++.+.+.+++..+.+. +++++ +++|++.+ .+.+ + .+.++|.+.|+
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~------------~~~l----~--~~~~~v~~~~~ 290 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVT------------PAEL----G--ELPDNVEVHDW 290 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---C------------GGGG----C--SCCTTEEEESS
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCC------------hHHh----c--cCCCCeEEEec
Confidence 3456788999998 56656655555555443 46887 46787654 1111 1 24678999994
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 607 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~e~la 607 (696)
++.. .+++ .+|+||..+ .+++++|||++|+|+|++..++ ..+.+.+.+.|+.++++ |+++++
T Consensus 291 ----~~~~---~~l~-~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~ 358 (430)
T 2iyf_A 291 ----VPQL---AILR-QADLFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLR 358 (430)
T ss_dssp ----CCHH---HHHT-TCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHH
T ss_pred ----CCHH---HHhh-ccCEEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHH
Confidence 4433 5677 599999864 2379999999999999998765 46677778899999887 889999
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|.+++ .|++.++++++.+++.. +.++|+.+++.++++++
T Consensus 359 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 359 ETALALV----DDPEVARRLRRIQAEMA-QEGGTRRAADLIEAELP 399 (430)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHTTSC
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHhh
Confidence 9997776 79999999999988776 56899999999888764
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-19 Score=190.51 Aligned_cols=162 Identities=11% Similarity=0.005 Sum_probs=125.3
Q ss_pred CCCCEEEEEccccccCCh-HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKNM-TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi-~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+++.+++++|++...|+. ..+++++.+. ...|+++++++|++.+ .+.+. ++.++|++.|
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~------------~~~l~------~~~~~v~~~~- 276 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH------------RALLT------DLPDNARIAE- 276 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG------------GGGCT------TCCTTEEECC-
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc------------hhhcc------cCCCCEEEec-
Confidence 345567788999876555 7777777666 6667899999998764 11111 3567899999
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECC----CCHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP----YHPDQ 605 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p----~d~e~ 605 (696)
.++..++. + +||++|.. +.+.+++|||++|+|+|+. +..+..+.+.+.+.|+.+++ .|+++
T Consensus 277 ---~~~~~~ll---~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~ 345 (391)
T 3tsa_A 277 ---SVPLNLFL---R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQ 345 (391)
T ss_dssp ---SCCGGGTG---G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHH
T ss_pred ---cCCHHHHH---h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHH
Confidence 45555544 5 69999964 5557999999999999994 44567788888899999998 78999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
++++|.+++ .||+.++++++.+.+.. +..+|+.+++.++++.
T Consensus 346 l~~ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 346 FTDSIATVL----GDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTA 387 (391)
T ss_dssp HHHHHHHHH----TCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC-
T ss_pred HHHHHHHHH----cCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 999997766 89999999998887765 7899999999888764
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=189.52 Aligned_cols=159 Identities=10% Similarity=0.009 Sum_probs=105.2
Q ss_pred CCCCEEEEEccccccCC-------hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 455 RSKPIVFSMARLDHVKN-------MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kg-------i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
+.+++++++|++...|+ ...+..++..+.+. ++++++++++.+ .+.+. .+.++
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~------------~~~l~------~~~~~ 285 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--GFEVVVAVSDKL------------AQTLQ------PLPEG 285 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG--TCEEEECCCC--------------------------CCTT
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--CCEEEEEeCCcc------------hhhhc------cCCCc
Confidence 34567888999976652 33333333334333 588999888754 22222 35678
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECCC--
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY-- 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p~-- 601 (696)
|++.| .++ +..+++ .+|++|.. +.+.+++|||+||+|+|+. +..+..+.+.+.+.|+.+++.
T Consensus 286 v~~~~----~~~---~~~ll~-~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VLAAG----QFP---LSAIMP-ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EEEES----CCC---HHHHGG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EEEeC----cCC---HHHHHh-hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 99999 444 445566 59999964 5578999999999999994 555778888899999999887
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
|+++++++|.+++ .||+.++++++.+++.. +..+|+.+++.+++
T Consensus 354 ~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 354 GVESVLAACARIR----DDSSYVGNARRLAAEMA-TLPTPADIVRLIEQ 397 (398)
T ss_dssp ---CHHHHHHHHH----HCTHHHHHHHHHHHHHT-TSCCHHHHHHHHTC
T ss_pred CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc
Confidence 7788999997766 79999999999988775 78999999887753
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=183.22 Aligned_cols=290 Identities=13% Similarity=0.134 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhH
Q 005444 276 TFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 354 (696)
Q Consensus 276 ~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~ 354 (696)
.....+.+.+.+. +||+||++.... ++.+.+.+++.++|++++.+++ .+ +.... .|. ... ...
T Consensus 98 ~~~~~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-rs-~~~~~-~~~--~~~--------~r~ 161 (396)
T 3dzc_A 98 KILLGMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-RT-GNIYS-PWP--EEG--------NRK 161 (396)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-CC-SCTTS-STT--HHH--------HHH
T ss_pred HHHHHHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-ccccc-CCc--HHH--------HHH
Confidence 3334455555544 999999988665 4666788899999976544333 11 11000 010 000 011
Q ss_pred HhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC-CcCCCCCCCchHHHHHhhhhc
Q 005444 355 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHG 433 (696)
Q Consensus 355 ~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~ 433 (696)
..-+.+|.++++|+...+... ..|++ +.++.++.|. +|...+.+..... ....
T Consensus 162 ~~~~~a~~~~~~se~~~~~l~--------------------~~G~~--~~ki~vvGn~~~d~~~~~~~~~~~--~~~~-- 215 (396)
T 3dzc_A 162 LTAALTQYHFAPTDTSRANLL--------------------QENYN--AENIFVTGNTVIDALLAVREKIHT--DMDL-- 215 (396)
T ss_dssp HHHHTCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHHHHHHH--CHHH--
T ss_pred HHHHhcCEEECCCHHHHHHHH--------------------HcCCC--cCcEEEECCcHHHHHHHhhhhccc--chhh--
Confidence 234678999999987654211 12333 6789999884 4532221110000 0000
Q ss_pred chhhhcCCccccccccCCCCCCCCCE-EEEEccccc-cCChHHHHHHHHHhhccCCCeEEEEE-eCccCCCCCcchHHHH
Q 005444 434 SIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIA 510 (696)
Q Consensus 434 ~~~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~-~Kgi~~Llea~~~l~~~~~~~~LvIv-G~g~~~~~~~d~e~~~ 510 (696)
..+.++.+|++ ++++++ +++.+|... .|++..+++|+.++.+.+|++++++. |.++.
T Consensus 216 --------~~~~r~~lg~l-~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~----------- 275 (396)
T 3dzc_A 216 --------QATLESQFPML-DASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPN----------- 275 (396)
T ss_dssp --------HHHHHHTCTTC-CTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHH-----------
T ss_pred --------HHHHHHHhCcc-CCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChH-----------
Confidence 01122346632 334444 555656543 47899999999999877789999986 43321
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhh
Q 005444 511 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEII 589 (696)
Q Consensus 511 ~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI 589 (696)
..+.++++ .+..++|.+++ .+...++..+|+. ||++|.+| | |++ +|||+||+|+|++ +.++..|++
T Consensus 276 ~~~~l~~~---~~~~~~v~~~~----~lg~~~~~~l~~~-ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v 342 (396)
T 3dzc_A 276 VREPVNKL---LKGVSNIVLIE----PQQYLPFVYLMDR-AHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAV 342 (396)
T ss_dssp HHHHHHHH---TTTCTTEEEEC----CCCHHHHHHHHHH-CSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHH
T ss_pred HHHHHHHH---HcCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHH
Confidence 12233332 34457899988 5666788899994 99999998 3 444 8999999999999 888888998
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 590 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 590 ~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
.+| +++++++ |+++++++|.+++ .|++.+++|++++. .|.....++++.++
T Consensus 343 ~~G-~~~lv~~-d~~~l~~ai~~ll----~d~~~~~~m~~~~~-----~~~~~~aa~ri~~~ 393 (396)
T 3dzc_A 343 AAG-TVKLVGT-NQQQICDALSLLL----TDPQAYQAMSQAHN-----PYGDGKACQRIADI 393 (396)
T ss_dssp HHT-SEEECTT-CHHHHHHHHHHHH----HCHHHHHHHHTSCC-----TTCCSCHHHHHHHH
T ss_pred HcC-ceEEcCC-CHHHHHHHHHHHH----cCHHHHHHHhhccC-----CCcCChHHHHHHHH
Confidence 877 5777764 8999999997766 79999999987654 34444555555443
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.9e-17 Score=174.44 Aligned_cols=161 Identities=12% Similarity=0.100 Sum_probs=115.2
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEE-EeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvI-vG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+.+.++++.|+....++ +.+.+++..+.+. + +++++ +|++.+ .+.+. .+.++|++.|+
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~g~~~~------------~~~~~------~~~~~v~~~~~ 288 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFADT-P-WHVVMAIGGFLD------------PAVLG------PLPPNVEAHQW 288 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHTTS-S-CEEEEECCTTSC------------GGGGC------SCCTTEEEESC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHhcC-C-cEEEEEeCCcCC------------hhhhC------CCCCcEEEecC
Confidence 44567888999876552 3333344444332 3 66665 454433 11111 25678999994
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----CCCCcchhhccCCeEEEECCC--CHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----CHGGPAEIIEHGASGFHIDPY--HPDQA 606 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-----~~gG~~EiI~dg~~G~l~~p~--d~e~l 606 (696)
++.. .+++ .+|++|..+ -..|++|||++|+|+|+. +..+.++.+.+.+.|..++++ +++++
T Consensus 289 ----~~~~---~ll~-~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 289 ----IPFH---SVLA-HARACLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp ----CCHH---HHHT-TEEEEEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHH
T ss_pred ----CCHH---HHHh-hCCEEEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHH
Confidence 4433 6667 599999864 237899999999999954 445678888888999999876 88999
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 607 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 607 a~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++|.+++ .|++.++++++.+.+.. +..+++..++.++++++
T Consensus 357 ~~~~~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 357 REAVERLA----ADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHHHH----HCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----cCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHh
Confidence 99997766 89999999988887665 77899999999988764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.8e-17 Score=175.39 Aligned_cols=157 Identities=13% Similarity=0.121 Sum_probs=119.4
Q ss_pred CCCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+.+++++++|++... ++...+.+++..+.+. ++++++++++.+. +.+. ++.++|++.|+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~------------~~l~------~~~~~v~~~~~ 290 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDI------------SPLG------TLPRNVRAVGW 290 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCC------------GGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcCh------------hhhc------cCCCcEEEEcc
Confidence 345678889999765 4666666666666553 6899999988651 1111 45678999994
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCCCCcc--hhhccCCeEEEECCC--CHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPA--EIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVva----t~~gG~~--EiI~dg~~G~l~~p~--d~e~ 605 (696)
++. ..+++ .+|+||.. +.+.|++|||++|+|+|+ .+.++.. +.+++.+.|+.+++. +.+.
T Consensus 291 ----~~~---~~ll~-~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~ 358 (398)
T 3oti_A 291 ----TPL---HTLLR-TCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADL 358 (398)
T ss_dssp ----CCH---HHHHT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHH
T ss_pred ----CCH---HHHHh-hCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHH
Confidence 443 45566 59999974 556799999999999999 5778888 999999999999876 5555
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
++ +++ +||+.++++++.+.+.. +..+|+.+++.+++++
T Consensus 359 l~----~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----RLI----GDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp HH----HHH----HCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HH----HHH----cCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 55 444 79999999998888765 7899999999998875
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=179.47 Aligned_cols=287 Identities=16% Similarity=0.131 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhH
Q 005444 276 TFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 354 (696)
Q Consensus 276 ~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~ 354 (696)
.....+.+.+.+. +||+||++.... .+.+.+.+++.++|+++...++ .+ + +.++..... ....
T Consensus 101 ~~~~~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs-~---~~~~~~p~~--------~~r~ 164 (403)
T 3ot5_A 101 RVMNGINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RT-W---NKYSPFPEE--------MNRQ 164 (403)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CC-S---CTTSSTTHH--------HHHH
T ss_pred HHHHHHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-c---ccccCCcHH--------HHHH
Confidence 3334455555544 999999998654 5556788899999976543332 11 0 100000000 0111
Q ss_pred HhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhc
Q 005444 355 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHG 433 (696)
Q Consensus 355 ~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~ 433 (696)
..-+.+|.+++.|+...+... ..|++ +.++.++.| ++|...+.+.....
T Consensus 165 ~~~~~a~~~~~~se~~~~~l~--------------------~~Gi~--~~~i~vvGn~~~D~~~~~~~~~~~-------- 214 (403)
T 3ot5_A 165 LTGVMADIHFSPTKQAKENLL--------------------AEGKD--PATIFVTGNTAIDALKTTVQKDYH-------- 214 (403)
T ss_dssp HHHHHCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHSCTTCC--------
T ss_pred HHHHhcCEEECCCHHHHHHHH--------------------HcCCC--cccEEEeCCchHHHHHhhhhhhcc--------
Confidence 233458999999988654211 12333 678999987 45643322211000
Q ss_pred chhhhcCCccccccccCCCCCCCCCEEEEEccccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHH
Q 005444 434 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEI 512 (696)
Q Consensus 434 ~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~ 512 (696)
.+.++.+ ++++.++++.||... .|++..+++|+.++.+.+|+++++++++... ...
T Consensus 215 ---------~~~~~~l----~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~----------~~~ 271 (403)
T 3ot5_A 215 ---------HPILENL----GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP----------AVR 271 (403)
T ss_dssp ---------CHHHHSC----TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH----------HHH
T ss_pred ---------hHHHHhc----cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH----------HHH
Confidence 0001111 223345667777654 3789999999999988788999998753211 012
Q ss_pred HHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhcc
Q 005444 513 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEH 591 (696)
Q Consensus 513 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~d 591 (696)
+.++++ ++..++|+++| .+...++..+++. ||++|.+| |...+|||+||+|+|++ +.|+..|.+..
T Consensus 272 ~~l~~~---~~~~~~v~l~~----~l~~~~~~~l~~~-ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~ 338 (403)
T 3ot5_A 272 EKAMAI---LGGHERIHLIE----PLDAIDFHNFLRK-SYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEA 338 (403)
T ss_dssp HHHHHH---HTTCTTEEEEC----CCCHHHHHHHHHH-EEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHH
T ss_pred HHHHHH---hCCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeC
Confidence 223322 34456899998 6666789999995 99999987 33348999999999999 78888898866
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
| +|+++++ |++++++++.+++ .|++.+++|++++..+. ...+++++++.+.++
T Consensus 339 g-~~~lv~~-d~~~l~~ai~~ll----~~~~~~~~m~~~~~~~g-~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 339 G-TLKLIGT-NKENLIKEALDLL----DNKESHDKMAQAANPYG-DGFAANRILAAIKSH 391 (403)
T ss_dssp T-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHHHSCCTTC-CSCHHHHHHHHHHHH
T ss_pred C-cEEEcCC-CHHHHHHHHHHHH----cCHHHHHHHHhhcCccc-CCcHHHHHHHHHHHH
Confidence 6 8999876 8999999997766 79999999987654432 344555555555443
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-15 Score=162.16 Aligned_cols=161 Identities=10% Similarity=0.013 Sum_probs=113.8
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEE-EeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvI-vG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+.+.++++.|++....+ ..+..++..+.+. + +++++ +|++.+ .+.+. .+.++|++.|
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~-~-~~~v~~~g~~~~------------~~~l~------~~~~~v~~~~- 303 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDGQ-P-WHVVMTLGGQVD------------PAALG------DLPPNVEAHR- 303 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHHTTS-S-CEEEEECTTTSC------------GGGGC------CCCTTEEEES-
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHHhcC-C-cEEEEEeCCCCC------------hHHhc------CCCCcEEEEe-
Confidence 44567788899865432 2333333333332 3 77777 454433 11111 3567899998
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECCC--CHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY--HPDQAA 607 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p~--d~e~la 607 (696)
.++.. .+++ .+|++|..+ -..|++|||++|+|+|+. +....++.+.+.+.|..++++ ++++++
T Consensus 304 ---~~~~~---~ll~-~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~ 372 (415)
T 3rsc_A 304 ---WVPHV---KVLE-QATVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLL 372 (415)
T ss_dssp ---CCCHH---HHHH-HEEEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHH
T ss_pred ---cCCHH---HHHh-hCCEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHH
Confidence 44443 5566 499999864 237899999999999994 445567788888899999876 889999
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|.+++ .|++.++++++.+.+.. +..+++.+++.++++++
T Consensus 373 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 373 AAVGAVA----ADPALLARVEAMRGHVR-RAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHH----TCHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 9997766 89999999988877665 77899999998888764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-15 Score=161.35 Aligned_cols=156 Identities=15% Similarity=0.103 Sum_probs=114.5
Q ss_pred CCCEEEEEcccccc-------CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 456 SKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 456 ~k~iIl~vGRL~~~-------Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
...+++++|++... +.+..+++++.++ ++++++++++.+ .+.+. . ++++|
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~------------~~~l~----~--~~~~v 266 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTV------------AEALR----A--EVPQA 266 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHH------------HHHHH----H--HCTTS
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCC------------HHhhC----C--CCCce
Confidence 34578899999875 5566677776542 578888776532 22232 1 35689
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--C
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--H 602 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d 602 (696)
.+ | .++..+ +++ ++|+||.. +.++|++|||++|+|+|+...++ .++.+.+.+.|+.+++. +
T Consensus 267 ~~-~----~~~~~~---~l~-~~d~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~ 333 (384)
T 2p6p_A 267 RV-G----WTPLDV---VAP-TCDLLVHH----AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDS 333 (384)
T ss_dssp EE-E----CCCHHH---HGG-GCSEEEEC----SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCC
T ss_pred EE-c----CCCHHH---HHh-hCCEEEeC----CcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCC
Confidence 99 9 444444 456 59999986 34579999999999999997754 67777787899999875 7
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+++++++|.+++ .|++.++++++.+.+.. ..-.-+..++.+.++.
T Consensus 334 ~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 334 TEAIADSCQELQ----AKDTYARRAQDLSREIS-GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 899999997776 79999999988887664 4556777777666654
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.6e-15 Score=168.61 Aligned_cols=330 Identities=14% Similarity=0.050 Sum_probs=209.7
Q ss_pred CCeEEEEeCCCchHHHH-HHhhc--------------CCCcEEEEecCCCccCC---CCCCc------cHh---hhhhh-
Q 005444 292 FPDFIIGNYSDGNLVAS-LLAYK--------------MGITQCTIAHALEKTKY---PDSDI------YWK---KFDEK- 343 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~-lla~~--------------~gip~v~t~H~l~~~~~---~~s~~------~~~---~~~~~- 343 (696)
+||+||+|.++++++.. ++... .+.+.++|.|++.+... +..-+ .+. .+...
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999977655 43222 24578999999765432 10000 000 00000
Q ss_pred ------------------hhccchhhhhHHhhhcCCEEEeccHHHHhhcccc-cccccccccccccccceeecccccCCC
Q 005444 344 ------------------YHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT-VGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 344 ------------------y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~-v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
..+..++..-..++..|+.|-++|....+.++.. .+ +++ ...+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~-----------~~~------~~~p~ 431 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA-----------DWY------ALWPE 431 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH-----------HHH------HHCGG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh-----------hHH------HcCcc
Confidence 0001123334568899999999999888776632 22 122 22367
Q ss_pred cEEEecCCCcCCCC----CCCchHHH--H------------Hhhh---hcc------h-hhhcCCccc----cccccCCC
Q 005444 405 KFNIVSPGADMDIY----FPYSEKQK--R------------LTAL---HGS------I-EQLLFDPEQ----NDEHVGTL 452 (696)
Q Consensus 405 k~~VIpnGvD~~~f----~p~~~~~~--r------------~~~~---~~~------~-~~~l~~~~~----~~~~~g~l 452 (696)
|++-|.||||...| .|.....- . +..+ .+. + +.+..++.. .+++.|+.
T Consensus 432 kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~ 511 (796)
T 2c4m_A 432 KFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIE 511 (796)
T ss_dssp GEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred ccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 89999999999998 34321110 0 0000 000 0 112222333 24567877
Q ss_pred CCCCCCEEEEEccccccCChHH-HHHHHHHhhc--cC-----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH----
Q 005444 453 SDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQ--LR-----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK---- 520 (696)
Q Consensus 453 ~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~--~~-----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~---- 520 (696)
.+++.+.++++.|+...|+.+. ++..+.++.+ .. ..+.|++.|.+.. .+..-+..++.+..+++
T Consensus 512 vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~ 587 (796)
T 2c4m_A 512 IDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAP----GYVRAKAIIKLINSIADLVNN 587 (796)
T ss_dssp CCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCH----hHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999 8888777653 22 2588988888765 23344445555666665
Q ss_pred HcCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--CCe
Q 005444 521 TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GAS 594 (696)
Q Consensus 521 ~~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--g~~ 594 (696)
....++ +|.|+. .. +..+.+.+..+||++.+||. +|++|++-+=||..|.++|+|-.|...|+.++ ..|
T Consensus 588 dp~~~~~lKVvFl~----nY-~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~N 662 (796)
T 2c4m_A 588 DPEVSPLLKVVFVE----NY-NVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEEN 662 (796)
T ss_dssp CTTTTTTEEEEEET----TC-CHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGG
T ss_pred ccccCCceEEEEEC----CC-CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCc
Confidence 224567 788885 22 44666666668999999999 99999999999999999999999999998765 469
Q ss_pred EEEECC--CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 595 GFHIDP--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 595 G~l~~p--~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
||+|.. .++.++-.. .+..+....+| .++++-+++. ...|||..- ..|..+|.
T Consensus 663 gF~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~~Ly~ 717 (796)
T 2c4m_A 663 AYIFGARVEELPALRES-YKPYELYETVP-GLKRALDALD---NGTLNDNNS-GLFYDLKH 717 (796)
T ss_dssp SEEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTT---SSSSCCTTC-CHHHHHHH
T ss_pred EEEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHH---cCCCCCCCH-HHHHHHHH
Confidence 999986 666666554 33333333455 3554444443 256888653 44555554
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-14 Score=155.06 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=116.7
Q ss_pred CCEEEEEcccccc-----CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 457 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 457 k~iIl~vGRL~~~-----Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
..++++.|++... |.+..+++++..+ ++++++++++.+ .+.+ + ++.++|++.
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~------------~~~l----~--~~~~~v~~~ 324 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQ------------LEGV----A--NIPDNVRTV 324 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTT------------TSSC----S--SCCSSEEEC
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcc------------hhhh----c--cCCCCEEEe
Confidence 4578899998764 8888889888653 578888877644 1111 1 356789999
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~e~ 605 (696)
| .++..++ +. ++|++|.. +.+.|+.|||++|+|+|+...++ .++.+.+.+.|+.+++. ++++
T Consensus 325 ~----~~~~~~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 392 (441)
T 2yjn_A 325 G----FVPMHAL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQ 392 (441)
T ss_dssp C----SCCHHHH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHH
T ss_pred c----CCCHHHH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHH
Confidence 8 5555444 55 59999984 44689999999999999997743 56777788899999876 8899
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++++|.+++ .|++.++++++.+.+.. ...+++.+++.++++++
T Consensus 393 l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 393 LRESVKRVL----DDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----cCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 999997776 79999999988887665 67899999999888754
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=160.24 Aligned_cols=232 Identities=11% Similarity=0.034 Sum_probs=161.0
Q ss_pred hhhHHhhhcCCEEEeccHHHHhhcccc-cccccccccccccccceeecccccCCCcEEEecCCCcCCCC----CCCchHH
Q 005444 351 TADLIAMNNADFIITSTYQEIAGTKNT-VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY----FPYSEKQ 425 (696)
Q Consensus 351 ~~e~~a~~~AD~IIt~S~~~~~~~k~~-v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f----~p~~~~~ 425 (696)
..-..++..|+.|-++|....+.++.. ++. ++ ..++.+++-|.||||...| .|.....
T Consensus 429 nMa~lai~~S~~VNgVS~lH~e~ik~~~f~~-----------~~------~~~p~k~~~iTNGI~~rrWl~~~NP~l~~l 491 (824)
T 2gj4_A 429 NMAHLCIAGSHAVNGVARIHSEILKKTIFKD-----------FY------ELEPHKFQNKTNGITPRRWLVLCNPGLAEI 491 (824)
T ss_dssp EHHHHHHHTCSCEEESSHHHHHHHHHTTTHH-----------HH------HHCGGGEEECCCCBCTCCCCCCTCHHHHHH
T ss_pred cHHHHHHHhcCceeeEcHHHHHHHhhHHhHH-----------HH------HcChhhcccccCCcChhhhcccCCHhHHHH
Confidence 334568999999999999888776532 221 12 1236789999999999998 4432211
Q ss_pred H--H-----------Hhh---hh--cch-----hhhcCCccc----cccccCCCCCCCCCEEEEEccccccCChHHH-HH
Q 005444 426 K--R-----------LTA---LH--GSI-----EQLLFDPEQ----NDEHVGTLSDRSKPIVFSMARLDHVKNMTGL-VE 477 (696)
Q Consensus 426 ~--r-----------~~~---~~--~~~-----~~~l~~~~~----~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L-le 477 (696)
- . +.. +. +.+ +-+..++.. ..++.|+..+++.+.++++.|+...|+.+.+ +.
T Consensus 492 I~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~ 571 (824)
T 2gj4_A 492 IAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLH 571 (824)
T ss_dssp HHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHH
T ss_pred HHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHH
Confidence 0 0 000 00 011 112223333 3455788778999999999999999999997 77
Q ss_pred HHHHhhc--cCC-----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC----CCC--cEEEeccccccCChhHHH
Q 005444 478 CYGKNSQ--LRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK----LDG--QFRWIAAQTNRARNGELY 544 (696)
Q Consensus 478 a~~~l~~--~~~-----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~----L~~--~V~flG~~~~~v~~~el~ 544 (696)
.+.++.+ ..| ++.|++.|.+.. .+..-+..++.+..+++.++ +++ +|.|+. .. +..+.
T Consensus 572 ~i~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~----nY-dvslA 642 (824)
T 2gj4_A 572 VITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NY-RVSLA 642 (824)
T ss_dssp HHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TC-CHHHH
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEEEeCCH----hHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC----CC-CHHHH
Confidence 7766631 122 478888888765 24445555666777776553 356 788885 22 44666
Q ss_pred HHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhc--cCCeEEEECCCCHHHHHHHH
Q 005444 545 RYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELM 610 (696)
Q Consensus 545 ~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~--dg~~G~l~~p~d~e~la~~I 610 (696)
+.+..+||++.+||. +|++|++-+=||..|.++|+|-.|...|+.+ ...|||+|... .+++ ..+
T Consensus 643 ~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 643 EKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred HHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 666668999999999 9999999999999999999999998888875 45699999875 6666 444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4e-14 Score=163.45 Aligned_cols=332 Identities=12% Similarity=0.011 Sum_probs=212.1
Q ss_pred CCeEEEEeCCCchHHHH-HHhhc--------------CCCcEEEEecCCCccCC---CCCCc------cHh---hhhhh-
Q 005444 292 FPDFIIGNYSDGNLVAS-LLAYK--------------MGITQCTIAHALEKTKY---PDSDI------YWK---KFDEK- 343 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~-lla~~--------------~gip~v~t~H~l~~~~~---~~s~~------~~~---~~~~~- 343 (696)
+||+||+|.++++++.. ++... .+.+.++|.|++.+... +..-+ .+. .+...
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999977655 33221 36789999999865442 11000 000 00000
Q ss_pred --------------h-----hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 344 --------------Y-----HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 344 --------------y-----~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
+ .+..++..-..++..|+.|-++|....+.++...- ++++ ..++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f----------~~~~------~~~p~ 442 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLF----------PEYH------QLWPN 442 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTS----------HHHH------HHCGG
T ss_pred HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHh----------hHHH------HhCcc
Confidence 0 00012223456789999999999988876654211 1111 23367
Q ss_pred cEEEecCCCcCCCC----CCCchHHH-------------HHhhhhc---------c-hhhhcCCccc----cccccCCCC
Q 005444 405 KFNIVSPGADMDIY----FPYSEKQK-------------RLTALHG---------S-IEQLLFDPEQ----NDEHVGTLS 453 (696)
Q Consensus 405 k~~VIpnGvD~~~f----~p~~~~~~-------------r~~~~~~---------~-~~~~l~~~~~----~~~~~g~l~ 453 (696)
|++-|.||||...| .|.....- .+..+.+ + .+.+..++.. .+++.|+..
T Consensus 443 k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 522 (796)
T 1l5w_A 443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522 (796)
T ss_dssp GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 89999999998887 34321110 0000000 0 0112222333 245678877
Q ss_pred CCCCCEEEEEccccccCChHH-HHHHHHHhhcc--C-----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH----H
Q 005444 454 DRSKPIVFSMARLDHVKNMTG-LVECYGKNSQL--R-----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK----T 521 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~--~-----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~----~ 521 (696)
+++.+.++++.|+...|+.+. ++..+.++.+. . ..+.|++.|.+.. .+..-+..++.+..+++ .
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~D 598 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVADVINND 598 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCCh----hHHHHHHHHHHHHHHHHHhccc
Confidence 899999999999999999999 78877766431 1 2488888888765 23344444555666655 2
Q ss_pred cCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--CCeE
Q 005444 522 YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASG 595 (696)
Q Consensus 522 ~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--g~~G 595 (696)
...++ +|.|+. .. +..+.+.+..+||++.+||. +|++|++-+=||..|.++|+|-.|...|+.++ ..||
T Consensus 599 p~~~~~lKVvfl~----nY-~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 673 (796)
T 1l5w_A 599 PLVGDKLKVVFLP----DY-CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENI 673 (796)
T ss_dssp TTTGGGEEEEECS----SC-CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CC-CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcE
Confidence 24566 788885 22 44666666668999999999 99999999999999999999999999998765 4699
Q ss_pred EEECCCCHHHHHHHH---HHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 596 FHIDPYHPDQAAELM---ADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 596 ~l~~p~d~e~la~~I---~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+|.. +.+++.+.- .+.......+| .++++-+++. ...|||..- ..|..+|..
T Consensus 674 F~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~~Ly~~ 729 (796)
T 1l5w_A 674 FIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELE---SGKYSDGDK-HAFDQMLHS 729 (796)
T ss_dssp EECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHH---HTTTTTTCT-TTTHHHHHH
T ss_pred EEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHH---cCCCCCCcH-HHHHHHHHH
Confidence 99987 777765322 11222233566 4666555554 367999764 667777764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=149.94 Aligned_cols=283 Identities=11% Similarity=0.041 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhh
Q 005444 278 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 357 (696)
Q Consensus 278 ~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~ 357 (696)
...+.+.+.+. +||+|+++.......+++.|++.|+|+++...++ .+ + +..+ .+. ......-
T Consensus 83 ~~~l~~~l~~~---kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs-~---~~~~--pee--------~nR~~~~ 144 (385)
T 4hwg_A 83 IEKVDEVLEKE---KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC-F---DQRV--PEE--------INRKIID 144 (385)
T ss_dssp HHHHHHHHHHH---CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC-S---CTTS--THH--------HHHHHHH
T ss_pred HHHHHHHHHhc---CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc-c---cccC--cHH--------HHHHHHH
Confidence 33444444444 9999999876543334788899999976544333 11 0 1000 000 0011233
Q ss_pred hcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC-CcCCCCCCCchHHHHHhhhhcchh
Q 005444 358 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIE 436 (696)
Q Consensus 358 ~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~~~ 436 (696)
..+|.++++|+...+... ..|++ +.++.++.|. +|.-.+.. ...
T Consensus 145 ~~a~~~~~~te~~~~~l~--------------------~~G~~--~~~I~vtGnp~~D~~~~~~--~~~----------- 189 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLI--------------------AEGLP--AELTFKSGSHMPEVLDRFM--PKI----------- 189 (385)
T ss_dssp HHCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCSHHHHHHHHH--HHH-----------
T ss_pred hhhceeecCCHHHHHHHH--------------------HcCCC--cCcEEEECCchHHHHHHhh--hhc-----------
Confidence 568999999987654211 12333 6688888873 34321100 000
Q ss_pred hhcCCccccccccCCCCCCCCCEEEEEcccc---ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHH
Q 005444 437 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 513 (696)
Q Consensus 437 ~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~---~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~ 513 (696)
+..+.++.+|+ ++++.++++.+|.. ..|++..+++|+.++.+.+ ++.+++..+ +.
T Consensus 190 ----~~~~~~~~lgl--~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~-p~-------------- 247 (385)
T 4hwg_A 190 ----LKSDILDKLSL--TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTH-PR-------------- 247 (385)
T ss_dssp ----HHCCHHHHTTC--CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEEC-HH--------------
T ss_pred ----chhHHHHHcCC--CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECC-hH--------------
Confidence 01123345676 44455666777743 4478999999999987544 677777543 21
Q ss_pred HHHHHHHHc-C-C--CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-Ccchh
Q 005444 514 KMHELMKTY-K-L--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEI 588 (696)
Q Consensus 514 ~l~~li~~~-~-L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-G~~Ei 588 (696)
+.+.++++ + + .++|.+++ .+...++..+++. ||++|.+| |....||+++|+|+|+.... +..|.
T Consensus 248 -~~~~l~~~~~~~~~~~~v~l~~----~lg~~~~~~l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~ 316 (385)
T 4hwg_A 248 -TKKRLEDLEGFKELGDKIRFLP----AFSFTDYVKLQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEG 316 (385)
T ss_dssp -HHHHHHTSGGGGGTGGGEEECC----CCCHHHHHHHHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHH
T ss_pred -HHHHHHHHHHHhcCCCCEEEEc----CCCHHHHHHHHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhh
Confidence 33444444 3 2 46799987 5666788889995 99999877 45679999999999998554 35787
Q ss_pred hccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 589 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 589 I~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+..| ++.++.+ |++++++++.+++ +|+..++.|++++..++....+-+++++.+.+++
T Consensus 317 v~~G-~~~lv~~-d~~~i~~ai~~ll----~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 317 MDAG-TLIMSGF-KAERVLQAVKTIT----EEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp HHHT-CCEECCS-SHHHHHHHHHHHH----TTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHH
T ss_pred hhcC-ceEEcCC-CHHHHHHHHHHHH----hChHHHHHhhccCCCCCCCChHHHHHHHHHHHHh
Confidence 7666 7777754 8999999997766 7887776665544433012334455555555543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-12 Score=141.57 Aligned_cols=156 Identities=11% Similarity=0.060 Sum_probs=109.3
Q ss_pred CCCCEEEEEcccc-ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~-~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
..++++++.|++. ..+.+..+++++..+ +++++++++..+. +..++.++|.+.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~-------------------~~~~~~~~v~~~~- 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGL-------------------GRIDEGDDCLVVG- 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTC-------------------CCSSCCTTEEEES-
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccc-------------------ccccCCCCEEEec-
Confidence 3467888999998 666677777777654 4667777665430 0123467899998
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc----chhhccCCeEEEECCC--CHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----AEIIEHGASGFHIDPY--HPDQAA 607 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~----~EiI~dg~~G~l~~p~--d~e~la 607 (696)
.++..++ +. .+|++|..+ -..|+.||+++|+|+|+...++- .+.+++.+.|..+++. +.++++
T Consensus 275 ---~~~~~~l---l~-~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 343 (404)
T 3h4t_A 275 ---EVNHQVL---FG-RVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLS 343 (404)
T ss_dssp ---SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---CCCHHHH---Hh-hCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHH
Confidence 5555444 45 599999753 23789999999999999866543 3445666789988754 688899
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|.+++ . |++++++.+.+.... . -.++..++.++++++
T Consensus 344 ~ai~~ll----~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 344 AALATAL----T-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHT----S-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHHH
T ss_pred HHHHHHh----C-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHh
Confidence 9987665 6 888887777665443 3 467777777776654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-11 Score=134.84 Aligned_cols=161 Identities=13% Similarity=0.088 Sum_probs=110.5
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+++.++++.|++. .+....+.+++..+.+ .+++++ ++|.+.+ .+.+ + .++++|++.|
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~------------~~~~----~--~~~~~v~~~~- 311 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD------------PADL----G--EVPPNVEVHQ- 311 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC------------GGGG----C--SCCTTEEEES-
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC------------hHHh----c--cCCCCeEEec-
Confidence 3456788899987 3444444444444433 457775 4566543 1111 1 2567899998
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 607 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~e~la 607 (696)
.++.. .+++ .+|+||.. +-++|++|||++|+|+|+....+ .++.+.+.+.|+.+++. ++++++
T Consensus 312 ---~~~~~---~~l~-~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 312 ---WVPQL---DILT-KASAFITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp ---SCCHH---HHHT-TCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred ---CCCHH---HHHh-hCCEEEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 44433 4677 49999974 33479999999999999997643 45666677889998765 889999
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|.+++ .|++.++++++.+.+.. +....+..++.++++.+
T Consensus 381 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 381 EAVLAVA----SDPGVAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 9997776 79998888877776543 45667777777777653
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-11 Score=133.19 Aligned_cols=153 Identities=10% Similarity=-0.021 Sum_probs=103.4
Q ss_pred CCCEEEEEccc-cccCChHHHHHHHHHhhccCCCeEEEEE-eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL-~~~Kgi~~Llea~~~l~~~~~~~~LvIv-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
...++++.|++ ...+.+..+++++..+. .+++++ |.+.. + ...+.++|.+.|
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~-------------~-------~~~~~~~v~~~~- 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------V-------LPDDGADCFAIG- 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------C-------CSSCGGGEEECS-
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCcc-------------c-------ccCCCCCEEEeC-
Confidence 45688899999 57888888888887652 456555 54432 0 013456899998
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 607 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~e~la 607 (696)
.++..++ +. ++|+||.. +-.+|++|||++|+|+|+....+ .++.+++.+.|+.+++. +.++++
T Consensus 292 ---~~~~~~~---l~-~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 292 ---EVNHQVL---FG-RVAAVIHH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp ---SCCHHHH---GG-GSSEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---cCChHHH---Hh-hCCEEEeC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 5555554 45 69999985 33479999999999999986655 56667777899998764 778888
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
++| .++ .|++.++++.+.+.+.. ..-..+.+++.++++
T Consensus 361 ~~i----~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 361 AAL----ATA-LTPETHARATAVAGTIR-TDGAAVAARLLLDAV 398 (415)
T ss_dssp HHH----HHH-TSHHHHHHHHHHHHHSC-SCHHHHHHHHHHHHH
T ss_pred HHH----HHH-cCHHHHHHHHHHHHHHh-hcChHHHHHHHHHHH
Confidence 888 556 68888877766655432 223344444444444
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=134.24 Aligned_cols=158 Identities=16% Similarity=0.196 Sum_probs=104.8
Q ss_pred CCCCEEEEEccccccCC-hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 455 RSKPIVFSMARLDHVKN-MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kg-i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+...++++.|++...++ ...+.+++..+.+ .+..+++++++.+.. ....++++|.+.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~------------------~~~~~~~~v~~~~- 294 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLA------------------LLGELPANVRVVE- 294 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCC------------------CCCCCCTTEEEEC-
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccc------------------ccccCCCCEEEEe-
Confidence 34456778888876543 4555556665554 346677766554411 1124678899988
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC----CcchhhccCCeEEEECCCCHHHHHHH
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPYHPDQAAEL 609 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g----G~~EiI~dg~~G~l~~p~d~e~la~~ 609 (696)
.++..++ +. .+|+||.- +..+++.|||++|+|+|+.... ..++.+++.+.|+.+++. +..+++
T Consensus 295 ---~~p~~~l---L~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~~~a 361 (400)
T 4amg_A 295 ---WIPLGAL---LE-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLGAEQ 361 (400)
T ss_dssp ---CCCHHHH---HT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT--TCSHHH
T ss_pred ---ecCHHHH---hh-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC--CchHHH
Confidence 5665554 55 59999863 4567999999999999996444 356677777789888754 446778
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 610 I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
|.+++ +||+++++..+-+.+ +...=+....++.++++
T Consensus 362 l~~lL----~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 362 CRRLL----DDAGLREAALRVRQE-MSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HHHHH----HCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHH
T ss_pred HHHHH----cCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHh
Confidence 87666 799988776655544 33555777888877776
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.4e-11 Score=135.75 Aligned_cols=186 Identities=9% Similarity=-0.022 Sum_probs=130.4
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEE--EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV--VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG 526 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~Lv--IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~ 526 (696)
+|++.+++.+++++.+++ .|..+.+++++.++.+..|+..|+ ++|++... ...+.+.+.+.|+.+
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~-----------~~~~~~~~~~~GI~~ 499 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI-----------THPYVERFIKSYLGD 499 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG-----------GHHHHHHHHHHHHGG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh-----------hHHHHHHHHHcCCCc
Confidence 555322346677777775 688999999999998888887764 35643220 112223345667878
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhc------cCCeEE-EEC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASGF-HID 599 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~------dg~~G~-l~~ 599 (696)
+|.|.| ..+..+....++. +|+|+-|+.+.+ |+|.+|||+||+|||+...++...-+. -|..++ +.+
T Consensus 500 Rv~F~g----~~p~~e~la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~ 573 (631)
T 3q3e_A 500 SATAHP----HSPYHQYLRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN 573 (631)
T ss_dssp GEEEEC----CCCHHHHHHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES
T ss_pred cEEEcC----CCCHHHHHHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC
Confidence 999999 7778888888885 999999998765 999999999999999977666665552 244443 333
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HhhhhH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG-VYGFWK 659 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~-~y~~~~ 659 (696)
|.++++++...+. .|++.+++++++.++......-|+..++++.++|+ .|.-|+
T Consensus 574 --d~eeYv~~Av~La----~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~ 628 (631)
T 3q3e_A 574 --TVDEYVERAVRLA----ENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFL 628 (631)
T ss_dssp --SHHHHHHHHHHHH----HCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHh----CCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHH
Confidence 7899988886655 89999999999998875442222244555555553 344454
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.29 E-value=7.8e-11 Score=129.10 Aligned_cols=136 Identities=11% Similarity=-0.016 Sum_probs=95.6
Q ss_pred CCCEEEEEcccc---ccCChHHHHHHHHHhhccCCCeEEEEE-eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 456 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 456 ~k~iIl~vGRL~---~~Kgi~~Llea~~~l~~~~~~~~LvIv-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
+..++++.|++. ..+.+..+++++..+ +++++++ |.+.. + . ..++++|.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-------------~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTEL-------------V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTC-------------C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCccc-------------c-c------cCCCCCEEEe
Confidence 356788899985 466777778887764 3556665 54422 0 0 1356789999
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECC--CCHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDP--YHPDQ 605 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p--~d~e~ 605 (696)
+ .++..++ +. ++|+||.- +-..|+.||+++|+|+|+....+ .++.+++.+.|+.++. .+.++
T Consensus 292 ~----~~~~~~l---l~-~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 359 (416)
T 1rrv_A 292 D----EVNFQAL---FR-RVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359 (416)
T ss_dssp S----SCCHHHH---GG-GSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred c----cCChHHH---hc-cCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence 8 5555554 45 69999984 33569999999999999976543 5566777788998875 36788
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
++++| .++ .|++.++++++.+.+
T Consensus 360 l~~~i----~~l-~~~~~~~~~~~~~~~ 382 (416)
T 1rrv_A 360 LSAAL----TTV-LAPETRARAEAVAGM 382 (416)
T ss_dssp HHHHH----HHH-TSHHHHHHHHHHTTT
T ss_pred HHHHH----HHh-hCHHHHHHHHHHHHH
Confidence 88887 556 788888777665543
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.1e-10 Score=106.48 Aligned_cols=133 Identities=11% Similarity=0.098 Sum_probs=99.3
Q ss_pred CCCEEEEEcccc---ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 456 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 456 ~k~iIl~vGRL~---~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
...+++++|++. ..|++..+++++.++ +.++++++++... + .+.++|++.|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~------------~---------~~~~~v~~~~ 74 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP------------D---------TLGLNTRLYK 74 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC------------T---------TCCTTEEEES
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc------------c---------cCCCcEEEec
Confidence 456888999996 567777777777543 3678888876541 0 3467899999
Q ss_pred cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC----CcchhhccCCeEEEECCC--CHHHH
Q 005444 533 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQA 606 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g----G~~EiI~dg~~G~l~~p~--d~e~l 606 (696)
+++..++..+ + ++|++|.. +.+.|++|||++|+|+|+.... +.++.+.+.+.|+.+++. +++++
T Consensus 75 ----~~~~~~~l~~-~-~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l 144 (170)
T 2o6l_A 75 ----WIPQNDLLGH-P-KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDL 144 (170)
T ss_dssp ----SCCHHHHHTS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHH
T ss_pred ----CCCHHHHhcC-C-CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHH
Confidence 5555555532 5 59999985 4468999999999999999764 456777888899999877 88999
Q ss_pred HHHHHHHHHhhhcCHHHHHHHH
Q 005444 607 AELMADFFGKCKENPSHWKKIS 628 (696)
Q Consensus 607 a~~I~~~l~~l~~dp~~~~~m~ 628 (696)
+++|.+++ .|++.++++.
T Consensus 145 ~~~i~~ll----~~~~~~~~a~ 162 (170)
T 2o6l_A 145 LNALKRVI----NDPSYKENVM 162 (170)
T ss_dssp HHHHHHHH----HCHHHHHHHH
T ss_pred HHHHHHHH----cCHHHHHHHH
Confidence 99997776 7887554443
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00011 Score=86.23 Aligned_cols=183 Identities=10% Similarity=0.033 Sum_probs=133.6
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
.|..+|+ +++.+++++..++.+ =-...++.+.++.+.-|+.+|++...... ..+.+.+.+++.|+
T Consensus 513 ~R~~~gL--p~~~v~f~~fN~~~K--i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-----------~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGL--PEDAIVYCNFNQLYK--IDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTC--CTTSEEEECCSCGGG--CCHHHHHHHHHHHHHCSSEEEEEEETTGG-----------GHHHHHHHHHHTTC
T ss_pred chhhcCC--CCCCEEEEeCCcccc--CCHHHHHHHHHHHHhCCCCeEEEEeCcHH-----------HHHHHHHHHHhcCC
Confidence 3556787 667777777766654 44567777777777779999999876543 13567888888888
Q ss_pred C-CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhc-----c-CCeEEE
Q 005444 525 D-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE-----H-GASGFH 597 (696)
Q Consensus 525 ~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~-----d-g~~G~l 597 (696)
. ++|.|.+ +.+..+....+.. +||++=|--|-| |.|..||+.+|+|||+-....+..-+. . |-.-++
T Consensus 578 ~~~r~~f~~----~~~~~~~l~~~~~-~Di~LDt~p~~g-~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i 651 (723)
T 4gyw_A 578 PQNRIIFSP----VAPKEEHVRRGQL-ADVCLDTPLCNG-HTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI 651 (723)
T ss_dssp CGGGEEEEE----CCCHHHHHHHGGG-CSEEECCSSSCC-SHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB
T ss_pred CcCeEEECC----CCCHHHHHHHhCC-CeEEeCCCCcCC-HHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc
Confidence 4 7899998 6677888888885 999998866644 899999999999999865333322211 0 111222
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RYTWKIYSERLMTLAGV 654 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~--~ysw~~~a~~l~~ly~~ 654 (696)
. .|.++..+.-..+. .|++.+..+.++-++.... -|+-+.+++.+++.|+.
T Consensus 652 a--~~~~~Y~~~a~~la----~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 652 A--KNRQEYEDIAVKLG----TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp C--SSHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH
Confidence 2 37888887775554 8999999999888877655 38999999999999875
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0038 Score=69.52 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=45.8
Q ss_pred HHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhh-ccCCeEEEECCC-----CHHHHHHHHHH
Q 005444 545 RYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEII-EHGASGFHIDPY-----HPDQAAELMAD 612 (696)
Q Consensus 545 ~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI-~dg~~G~l~~p~-----d~e~la~~I~~ 612 (696)
.++++ ++ +||.= +--++++||+++|+|+|+-...+ .+..+ +.-+.|..++.. +.++++++|.+
T Consensus 351 ~vL~h-~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~ 425 (480)
T 2vch_A 351 QVLAH-PSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKG 425 (480)
T ss_dssp HHHHS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHH
T ss_pred HHhCC-CCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHH
Confidence 45553 66 56642 33468999999999999975433 44554 566788887653 68889999987
Q ss_pred HH
Q 005444 613 FF 614 (696)
Q Consensus 613 ~l 614 (696)
++
T Consensus 426 vl 427 (480)
T 2vch_A 426 LM 427 (480)
T ss_dssp HH
T ss_pred Hh
Confidence 77
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00074 Score=74.81 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=64.2
Q ss_pred CCcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccC-CeEEEE
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHG-ASGFHI 598 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg-~~G~l~ 598 (696)
.+++...+ .++.. .++++ ++|+||.= +-.++++||+++|+|+|+-...+ .+..+.+. +.|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 35688877 45543 45663 36788862 44579999999999999975432 45556666 788888
Q ss_pred CCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHH
Q 005444 599 DPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 599 ~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
+.. +.++++++|.+++ .|++ .+++.+++++.
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRAL 425 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHH
Confidence 643 6788888887776 6775 55666666544
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.93 E-value=0.005 Score=68.54 Aligned_cols=151 Identities=11% Similarity=0.054 Sum_probs=85.1
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
...++++.|.+.. .....+.+++..+.+ .+.+++++-+....... .+. .-+.+ .++. .+++...+
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~l~~~~~~~~~~~--~~~--l~~~~---~~~~--~~~~~v~~--- 359 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLAN--CKKSFLWIIRPDLVIGG--SVI--FSSEF---TNEI--ADRGLIAS--- 359 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHH--TTCEEEEECCGGGSTTT--GGG--SCHHH---HHHH--TTTEEEES---
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHh--cCCcEEEEEcCCccccc--ccc--CcHhH---HHhc--CCCEEEEe---
Confidence 3456677787653 233444444444433 24666665443210000 000 00111 1222 45788887
Q ss_pred ccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhc-cCCeEEEECC-CCHHHHHH
Q 005444 536 NRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGASGFHIDP-YHPDQAAE 608 (696)
Q Consensus 536 ~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~-dg~~G~l~~p-~d~e~la~ 608 (696)
+++..+ ++++ ++++||. =+-.+++.||+++|+|+|+-...+ .+..+. +-+.|..++. -+.+++++
T Consensus 360 -~~pq~~---~L~h~~~~~~vt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~ 431 (482)
T 2pq6_A 360 -WCPQDK---VLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAK 431 (482)
T ss_dssp -CCCHHH---HHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHH
T ss_pred -ecCHHH---HhcCCCCCEEEe----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHH
Confidence 555443 5543 2344775 244578999999999999975543 344443 5678888862 27888888
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
+|.+++ .|++ .+++.+++++.
T Consensus 432 ~i~~ll----~~~~-~~~~r~~a~~l 452 (482)
T 2pq6_A 432 LINEVI----AGDK-GKKMKQKAMEL 452 (482)
T ss_dssp HHHHHH----TSHH-HHHHHHHHHHH
T ss_pred HHHHHH----cCCc-HHHHHHHHHHH
Confidence 887776 7886 35666666544
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0087 Score=66.27 Aligned_cols=135 Identities=15% Similarity=0.084 Sum_probs=76.6
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
++..++++.|.+...-+.+.+.+++..+.+. +.+++++-+... +.. .+ .+.+.... .+++...+
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~--~~l-~~------~~~~~~~~---~~~~~v~~-- 338 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEK--KVF-PE------GFLEWMEL---EGKGMICG-- 338 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCG--GGS-CT------THHHHHHH---HCSEEEES--
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCc--ccC-Ch------hHHHhhcc---CCCEEEEc--
Confidence 3445677788877323434444444444332 356666554310 000 00 11111110 24577776
Q ss_pred cccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchh-hccCCeEEEE-C---C----
Q 005444 535 TNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEI-IEHGASGFHI-D---P---- 600 (696)
Q Consensus 535 ~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~Ei-I~dg~~G~l~-~---p---- 600 (696)
.++..+ ++++ ++|+||.= +-.++++||+++|+|+|+-...+ .+.. ++.-+.|+.+ + .
T Consensus 339 --w~pq~~---vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~ 409 (463)
T 2acv_A 339 --WAPQVE---VLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDV 409 (463)
T ss_dssp --SCCHHH---HHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCC
T ss_pred --cCCHHH---HhCCCccCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCcc
Confidence 444433 4542 47788863 44579999999999999975433 3445 4667789988 2 2
Q ss_pred CCHHHHHHHHHHHH
Q 005444 601 YHPDQAAELMADFF 614 (696)
Q Consensus 601 ~d~e~la~~I~~~l 614 (696)
-+.++++++|.+++
T Consensus 410 ~~~~~l~~ai~~ll 423 (463)
T 2acv_A 410 VAAEEIEKGLKDLM 423 (463)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHH
Confidence 36888889887766
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0027 Score=70.25 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=83.5
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHH-HHHHHHcCCCCcEEEeccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKM-HELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l-~~li~~~~L~~~V~flG~~ 534 (696)
+..+.++.|.+... ..+.+.+.+..+... +.+++++-+... .+.+ ....++ ..+++...+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~------------~~~lp~~~~~~--~~~~~~vv~-- 333 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP------------KEKLPKGFLER--TKTKGKIVA-- 333 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH------------HHHSCTTHHHH--TTTTEEEES--
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc------------hhcCCHhHHhh--cCCceEEEe--
Confidence 34456777877642 234444444444332 355655543321 0111 011122 246788887
Q ss_pred cccCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccC-CeEEEECC--CCHHH
Q 005444 535 TNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHG-ASGFHIDP--YHPDQ 605 (696)
Q Consensus 535 ~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg-~~G~l~~p--~d~e~ 605 (696)
.++..+ +++ .++ +||.= +--.+++||+++|+|.|+-...+ .+..+++. +.|..++. -+.++
T Consensus 334 --w~Pq~~---vL~-h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~ 403 (454)
T 3hbf_A 334 --WAPQVE---ILK-HSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKES 403 (454)
T ss_dssp --SCCHHH---HHH-STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHH
T ss_pred --eCCHHH---HHh-hcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHH
Confidence 555544 455 377 56642 33468999999999999975433 44555664 78988865 36888
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
++++|.+++ .|+ ..++|.+++++.
T Consensus 404 l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 404 IKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 999997776 664 234555555443
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0039 Score=65.70 Aligned_cols=101 Identities=18% Similarity=0.062 Sum_probs=66.9
Q ss_pred CCCEEEEEcc-ccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC---CCcEE
Q 005444 456 SKPIVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL---DGQFR 529 (696)
Q Consensus 456 ~k~iIl~vGR-L~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L---~~~V~ 529 (696)
++.+++..|. ..+.|... .+.+++..+.+. +++++++|+..+ .+...++.+..+- ...+.
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRN 245 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTTEEE
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhh------------HHHHHHHHHhhhhccccceEe
Confidence 3445666776 55666665 788888877654 689999886644 2233334333220 12346
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
+.| ..+..++..+++. +|++|... .|..-+ |.++|+|+|+-
T Consensus 246 l~g----~~sl~e~~ali~~-a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 246 LAG----ETQLDQAVILIAA-CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp CTT----TSCHHHHHHHHHT-SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred ccC----cCCHHHHHHHHHh-CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 667 6778899999995 99999873 244333 99999999985
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.01 Score=61.39 Aligned_cols=94 Identities=11% Similarity=0.125 Sum_probs=61.4
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+.+++++|..+...-...+++++. +. .. -.+|+|.+.. ..+++++.+++. +++.+.++..
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~---~~-~~-i~vv~G~~~~-----------~~~~l~~~~~~~---~~v~v~~~~~- 217 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELP---KT-KI-ISIATSSSNP-----------NLKKLQKFAKLH---NNIRLFIDHE- 217 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSC---TT-SC-EEEEECTTCT-----------THHHHHHHHHTC---SSEEEEESCS-
T ss_pred CeEEEEECCCchhhHHHHHHHHhh---cC-CC-EEEEECCCch-----------HHHHHHHHHhhC---CCEEEEeCHH-
Confidence 456778888775432333444443 22 22 3455666643 145566655543 3799988544
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 581 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~ 581 (696)
++..+|+. ||+.|.+ -|.|+.|++++|+|.|.-.
T Consensus 218 -----~m~~~m~~-aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 218 -----NIAKLMNE-SNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp -----CHHHHHHT-EEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred -----HHHHHHHH-CCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 48888884 9999984 2689999999999999864
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.21 Score=52.89 Aligned_cols=102 Identities=14% Similarity=0.167 Sum_probs=68.6
Q ss_pred CCCCCE-EEEEccccccCCh--HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 454 DRSKPI-VFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 454 ~~~k~i-Il~vGRL~~~Kgi--~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
++++++ ++..|.=.+.|.. +.+.+.+..+.+. +.+++++|+..+ .+..+++++..+ ...+.+
T Consensus 182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e------------~~~~~~i~~~~~-~~~~~l 246 (349)
T 3tov_A 182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMD------------LEMVQPVVEQME-TKPIVA 246 (349)
T ss_dssp CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTT------------HHHHHHHHHTCS-SCCEEC
T ss_pred CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcch------------HHHHHHHHHhcc-cccEEe
Confidence 334444 4556654455655 4677777777654 578888886544 334455555544 234666
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
.| ..+..|+..+++. +|++|.. + .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~~~i~~---D-sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 247 TG----KFQLGPLAAAMNR-CNLLITN---D-SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp TT----CCCHHHHHHHHHT-CSEEEEE---S-SHHHHH-HHTTTCCEEEE
T ss_pred eC----CCCHHHHHHHHHh-CCEEEEC---C-CCHHHH-HHhcCCCEEEE
Confidence 77 6778899999995 9999986 2 355555 99999999996
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=91.09 E-value=0.18 Score=50.21 Aligned_cols=65 Identities=8% Similarity=0.049 Sum_probs=44.1
Q ss_pred hHHHHHHH-ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC---c-----chhhccCCeEEEECCCCHHHHHHHHH
Q 005444 541 GELYRYIA-DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---P-----AEIIEHGASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 541 ~el~~~la-~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG---~-----~EiI~dg~~G~l~~p~d~e~la~~I~ 611 (696)
.++..+|+ . ||++|.= +-..|+.|++++|+|.|.-.... . ++.+.+.+.++.+ +++.++++|.
T Consensus 123 ~~m~~~l~~~-AdlvIsh----aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~~~~L~~~i~ 194 (224)
T 2jzc_A 123 TKMQSIIRDY-SDLVISH----AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---APTETGLIAG 194 (224)
T ss_dssp SSHHHHHHHH-CSCEEES----SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---CSCTTTHHHH
T ss_pred chHHHHHHhc-CCEEEEC----CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---CHHHHHHHHH
Confidence 35778888 7 9999973 45679999999999999975532 1 3344444456666 3455666665
Q ss_pred HH
Q 005444 612 DF 613 (696)
Q Consensus 612 ~~ 613 (696)
++
T Consensus 195 ~l 196 (224)
T 2jzc_A 195 LR 196 (224)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=90.61 E-value=0.69 Score=47.90 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=64.8
Q ss_pred CCCEEEEEccccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.+++..|.=.+.|... .+.+.+..+.+ .+++++++++++. +.+...++.+.. + ++.+.|
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~--~~~~vvl~~g~~~-----------e~~~~~~i~~~~--~-~~~l~g- 240 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLAD--SGIRIKLPWGAPH-----------EEERAKRLAEGF--A-YVEVLP- 240 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTT--TCCEEEECCSSHH-----------HHHHHHHHHTTC--T-TEEECC-
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHH--CCCcEEEecCCHH-----------HHHHHHHHHhhC--C-cccccC-
Confidence 344556666545556655 67777777754 3688888754433 123334444332 2 466777
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. ||++|.. ++ |..=+ |.+.|+|+|+-
T Consensus 241 ---~~sl~el~ali~~-a~l~I~~---DS-G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 241 ---KMSLEGVARVLAG-AKFVVSV---DT-GLSHL-TAALDRPNITV 278 (326)
T ss_dssp ---CCCHHHHHHHHHT-CSEEEEE---SS-HHHHH-HHHTTCCEEEE
T ss_pred ---CCCHHHHHHHHHh-CCEEEec---CC-cHHHH-HHHcCCCEEEE
Confidence 6778999999995 9999986 22 55555 77799999985
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=80.83 E-value=13 Score=42.91 Aligned_cols=64 Identities=9% Similarity=0.094 Sum_probs=42.1
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC---------CCc-chhhccCCeEEEECCCCHHHHHHHHH
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH---------GGP-AEIIEHGASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~---------gG~-~EiI~dg~~G~l~~p~d~e~la~~I~ 611 (696)
++..++. .+|++|. -++-++.|++..++|||-... -|. -+ ..+..-|-++. +.+++.++|.
T Consensus 608 di~~ll~-~aD~lIT-----DySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~--~~~eL~~~i~ 678 (729)
T 3l7i_A 608 DVSELFL-ISDCLIT-----DYSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT--EPYGLAKELK 678 (729)
T ss_dssp CHHHHHH-TCSEEEE-----SSCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES--SHHHHHHHHT
T ss_pred CHHHHHH-HhCEEEe-----echHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC--CHHHHHHHHh
Confidence 5677777 5999994 567899999999999998621 111 11 11122344443 7888888885
Q ss_pred HHH
Q 005444 612 DFF 614 (696)
Q Consensus 612 ~~l 614 (696)
++.
T Consensus 679 ~~~ 681 (729)
T 3l7i_A 679 NLD 681 (729)
T ss_dssp THH
T ss_pred hhh
Confidence 543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 696 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-16 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 5e-14 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 8e-11 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 9e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 80.9 bits (198), Expect = 1e-16
Identities = 58/397 (14%), Positives = 116/397 (29%), Gaps = 41/397 (10%)
Query: 267 RFDVWPYLETFTEDVGSEITAELQGF-PDFIIGNYSDGNLVASLL--AYKMGITQCTIAH 323
D W + L G+ PD + + + + A I H
Sbjct: 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIH 163
Query: 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 383
+ ++I+ K + F + D + A +TV +
Sbjct: 164 NIAFQGQFGANIFSKLALPAHAFGMEGI-----EYYNDVSFLKGGLQTATALSTVSPSYA 218
Query: 384 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443
T + I + + G D D++ P ++ +++ + +
Sbjct: 219 EEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278
Query: 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS 503
EH + D P+ ++RL K + + E + + LVV+
Sbjct: 279 AVAEHF-RIDDDGSPLFCVISRLTWQKGIDLMAEAVDE--IVSLGGRLVVLGAGDV---- 331
Query: 504 KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563
L+ +A N + + D A + P+ +E
Sbjct: 332 ---------ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG-CD---AIIIPSRFEPC 378
Query: 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPYHPDQAAELMADFF 614
GLT + A+ G GG A+ + A+G P D + +
Sbjct: 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438
Query: 615 GKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
+ +P W ++ G+K +W+ + L
Sbjct: 439 -RYYHDPKLWTQMQKLGMKS---DVSWEKSAGLYAAL 471
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 72.6 bits (177), Expect = 5e-14
Identities = 25/226 (11%), Positives = 59/226 (26%), Gaps = 17/226 (7%)
Query: 434 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK----NSQLRELV 489
I + P ++ +FS+ RLD+ K + Y Q +
Sbjct: 231 EIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKI 290
Query: 490 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 549
+A + ++ ++E + + + L +
Sbjct: 291 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 350
Query: 550 TKGAFVQPAFYEAFGLTVVEAMTCGLPTF-----ATCHGGPAEIIEHGASGFHIDPYHPD 604
+ + + L E + P + G A + ++PY D
Sbjct: 351 S-DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDRD 406
Query: 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650
+ A + + + L I + + E ++
Sbjct: 407 EVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFIS 448
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 62.5 bits (150), Expect = 8e-11
Identities = 62/474 (13%), Positives = 125/474 (26%), Gaps = 72/474 (15%)
Query: 186 TGGQVVYILDQVRALENEMLLRIKRQGLDI--------SPKILIVTRLIPDAKGTTCNQR 237
GG + AL G ++ + + ++ +
Sbjct: 15 VGGLAEALTAISEAL--------ASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVS 66
Query: 238 LERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFII 297
E I SE W + + +++ E + PD +
Sbjct: 67 YEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVH 125
Query: 298 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 357
+ +L+ I H L K+K P + E + +
Sbjct: 126 FHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP-DIDPEHTGG 184
Query: 358 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 417
AD + T G +R G K V G D
Sbjct: 185 YIADIVTT---------------VSRGYLIDEWGFFRNFEG------KITYVFNGIDCSF 223
Query: 418 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477
+ E+ + + R D + ++
Sbjct: 224 WNESYLTG--------------SRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLL 269
Query: 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 537
+ ++ + + + + EK + ++
Sbjct: 270 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEM------------- 316
Query: 538 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597
+ E R + + + P+++E FGL +EAM G A+ GG +II + G
Sbjct: 317 -LSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET-GIL 374
Query: 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
+ P + A + + + S K + KR ++W+ +ER +
Sbjct: 375 VKAGDPGELANAILKAL---ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKA 424
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 46.1 bits (107), Expect = 9e-06
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 567 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWK 625
++EA+T GLP T G A I G I +P+ +Q E++
Sbjct: 286 LLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRM 341
Query: 626 KISDGGLKRIYERYTWKIYSERL 648
++ + E+
Sbjct: 342 AWAENARHYA-DTQDLYSLPEKA 363
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 696 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.87 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.25 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.15 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.06 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.93 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.74 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.63 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.22 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.21 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.04 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.85 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.82 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.59 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.4 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.28 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 95.75 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 86.82 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5.9e-43 Score=390.05 Aligned_cols=432 Identities=16% Similarity=0.156 Sum_probs=271.5
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee--
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 241 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i-- 241 (696)
|||++||...+|- -.+||+..++. .|+++|+++||+|+ |+|+.++.-... ..+..+..
T Consensus 1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~-~~~~~~~~~~ 60 (477)
T d1rzua_ 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAA-VTDPVKCFEF 60 (477)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHH-CCSCEEEEEE
T ss_pred CEEEEEEEeeecc-------cccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcchhhh-cccceEEEEE
Confidence 8999999887752 24799998888 56667899999999 998654321000 00000000
Q ss_pred c--CCCceEEEEecccC--------------ccc-ccccccccCCCccc-H---HHHHHHHHHHHHHHh-CCCCeEEEEe
Q 005444 242 S--GTEHTHILRVPFRS--------------EKG-ILRQWISRFDVWPY-L---ETFTEDVGSEITAEL-QGFPDFIIGN 299 (696)
Q Consensus 242 ~--~~~~v~I~rvp~~~--------------~~~-~~~~wisr~~i~p~-l---~~f~~~~~~~i~~~~-~~~pDvIh~h 299 (696)
. ....+.+.+++... ..+ +... ....++. . ..+...+.+.+.... ..+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h 137 (477)
T d1rzua_ 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQ---TGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAH 137 (477)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCT---TSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEE
T ss_pred eccCCceEEEEEEEECCeeEEEecChhhcccCCCcccCc---ccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEec
Confidence 0 00112222222110 000 1110 0111111 1 122223333222211 4689999999
Q ss_pred CCCchHHHHHH--hhcCCCcEEEEecCCCccCCCCCCccHhhhhh-------hhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 300 YSDGNLVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDE-------KYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 300 ~~~~~l~a~ll--a~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~-------~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
+|.+++.+..+ ++..++|+|+|.|++........+........ ...+.......+..+..+|.++++|...
T Consensus 138 ~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~ 217 (477)
T d1rzua_ 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (477)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred chhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHH
Confidence 98876655544 45678999999998754332111111000000 0011111223456788999999999876
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
++.... .+. .+....+ ......++.+|+||+|.+.|.|...+.-......+.....-.+..+.+...+
T Consensus 218 ~~~~~~---~~~---~~~~~~~------~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 285 (477)
T d1rzua_ 218 AEEILT---AEF---GMGLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (477)
T ss_dssp HHHTTS---HHH---HTTCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHHH---Hhc---Ccchhhh------hhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcc
Confidence 553211 110 0000000 0111458999999999999988533210000000000000000111122344
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
+ .++++++|+|+||+++.||++.|++|+.++.+. +.+|+++|.|+. ....++.++... +.++|.+
T Consensus 286 ~-~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~----------~~~~~~~~~~~~--~~~~v~~ 350 (477)
T d1rzua_ 286 I-DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV----------ALEGALLAAASR--HHGRVGV 350 (477)
T ss_dssp C-CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH----------HHHHHHHHHHHH--TTTTEEE
T ss_pred c-ccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCc----------hHHHHHHHHHhh--cCCeEEE
Confidence 4 256788999999999999999999999998763 789999999865 223344444444 4578999
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCC---------eEEEECCC
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA---------SGFHIDPY 601 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~---------~G~l~~p~ 601 (696)
.| ..+..++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||++|+|.|+. +|++|+|+
T Consensus 351 ~~----~~~~~~~~~~~~-~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~ 425 (477)
T d1rzua_ 351 AI----GYNEPLSHLMQA-GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV 425 (477)
T ss_dssp EE----SCCHHHHHHHHH-HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC
T ss_pred Ec----ccChhHHHHHHH-hCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCC
Confidence 98 555667777888 59999999999999999999999999999999999999998864 89999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.++++ +.+||+.|++|+++|. .++|||+.++++|+++|+.
T Consensus 426 d~~~la~ai~~~l~-~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 426 TLDGLKQAIRRTVR-YYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp SHHHHHHHHHHHHH-HHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-hhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHH
Confidence 99999999988773 4579999999999885 3689999999999999863
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.9e-41 Score=369.38 Aligned_cols=404 Identities=16% Similarity=0.142 Sum_probs=275.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc------cc
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN------QR 237 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~------~~ 237 (696)
|||+++|..++|. .+||++.|+. .|+++|+++||+|+ |+|+.++........ ..
T Consensus 1 MkIl~~~~~~pP~--------~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~~~~~~~~~ 60 (437)
T d2bisa1 1 MKVLLLGFEFLPV--------KVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGEE 60 (437)
T ss_dssp CEEEEECSCCTTC--------CSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEEEEECSSSE
T ss_pred CEEEEECCccCCc--------ccCCHHHHHH--------HHHHHHHHcCCEEE----EEecCCCccchhhccceeecccc
Confidence 8999999876642 2799999999 66777899999999 998665432211000 00
Q ss_pred ---eeeecCCCceEEEEecccCcccccccccccCCC-ccc-------HHHHHHHHHHHHHHH--hCCCCeEEEEeCCCch
Q 005444 238 ---LERVSGTEHTHILRVPFRSEKGILRQWISRFDV-WPY-------LETFTEDVGSEITAE--LQGFPDFIIGNYSDGN 304 (696)
Q Consensus 238 ---~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i-~p~-------l~~f~~~~~~~i~~~--~~~~pDvIh~h~~~~~ 304 (696)
........++.+.+++... +++... .+. ...|.......+... ....|||||+|++..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~ 132 (437)
T d2bisa1 61 VQVKVSYEERGNLRIYRIGGGL--------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV 132 (437)
T ss_dssp EEEEEEEEEETTEEEEEEESSG--------GGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGH
T ss_pred cceeeeeeccCCeEEEecCccc--------cccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhh
Confidence 0000111234444443211 111111 111 112222222222221 1457899999999988
Q ss_pred HHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccccc
Q 005444 305 LVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESH 384 (696)
Q Consensus 305 l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~ 384 (696)
+++.++++..++|+|+++|+.....++......... ...........+......+|.+++.+....... ...
T Consensus 133 ~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~---~~~---- 204 (437)
T d2bisa1 133 FAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGL-SELAPYPDIDPEHTGGYIADIVTTVSRGYLIDE---WGF---- 204 (437)
T ss_dssp HHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTC-GGGCCSSEECHHHHHHHHSSEEEESCHHHHHHT---HHH----
T ss_pred hHhhhhhccccCceeEEEeeccccccchhhhhhccc-hhhhhHHHHHHHHHHHHhhhhhcccchhhhhhh---hhh----
Confidence 999999999999999999997654332111111111 111112223456677889999999998765421 111
Q ss_pred ccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEc
Q 005444 385 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 464 (696)
Q Consensus 385 ~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vG 464 (696)
...+..++.+||||+|.+.|.|......+... .......+|. .++++|+++|
T Consensus 205 --------------~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~---~~~~~i~~~G 256 (437)
T d2bisa1 205 --------------FRNFEGKITYVFNGIDCSFWNESYLTGSRDER-----------KKSLLSKFGM---DEGVTFMFIG 256 (437)
T ss_dssp --------------HGGGTTTEEECCCCCCTTTSCGGGCCSCHHHH-----------HHHHHHHTTC---CSCEEEEEES
T ss_pred --------------hccccCceEEEecccccccccccccchhhHHH-----------HHhhhhhhhc---cCCceEEEee
Confidence 12236799999999999988764221110000 0011123443 5678999999
Q ss_pred cccc-cCChHHHHHHHHHhhcc--CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChh
Q 005444 465 RLDH-VKNMTGLVECYGKNSQL--RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 541 (696)
Q Consensus 465 RL~~-~Kgi~~Llea~~~l~~~--~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 541 (696)
|+.. .||++.+++|+..+... .++++|+|+|.+.. .....++.+.+. ..+.+.+.| .++.+
T Consensus 257 ~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~----------~~~~~~~~~~~~--~~~~~~~~~----~~~~~ 320 (437)
T d2bisa1 257 RFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEK--HGNVKVITE----MLSRE 320 (437)
T ss_dssp CBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHT--CTTEEEECS----CCCHH
T ss_pred cccccchhHHHHHhhhcccccccccccceeeeeccccc----------ccccchhhhccc--cccceeccc----cCcHH
Confidence 9975 79999999999988543 47899999999865 122233333333 345566666 67788
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCH
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 621 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp 621 (696)
++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||..|++.+ .+|++++++|++++|++|.++++ .|+
T Consensus 321 ~~~~~~~-~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~---~~~ 395 (437)
T d2bisa1 321 FVRELYG-SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSR 395 (437)
T ss_dssp HHHHHHT-TCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHT---TTT
T ss_pred HHHHHHh-hhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHh---CCH
Confidence 8999998 599999999999999999999999999999999999999875 58999999999999999987762 478
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 622 SHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 622 ~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+.+++|++++++.+ ++|||+.++++|+++|+
T Consensus 396 ~~~~~~~~~~~~~~-~~~s~~~~a~~~~~iY~ 426 (437)
T d2bisa1 396 SDLSKFRENCKKRA-MSFSWEKSAERYVKAYT 426 (437)
T ss_dssp SCTHHHHHHHHHHH-HHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Confidence 89999999999987 67999999999999997
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.9e-39 Score=338.05 Aligned_cols=364 Identities=15% Similarity=0.213 Sum_probs=249.7
Q ss_pred EEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCC
Q 005444 166 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 245 (696)
Q Consensus 166 I~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~ 245 (696)
|+++..+++| .||.++++. +|+++|+++||+|+ |+|+..... ..+
T Consensus 2 i~f~~~~y~p----------~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-------------~~~ 46 (370)
T d2iw1a1 2 VAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGD-------------CPK 46 (370)
T ss_dssp EEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSC-------------CCT
T ss_pred EEEEecCCCC----------CCCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCC-------------CCC
Confidence 7888877764 399999999 67777899999999 998653211 012
Q ss_pred ceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCC
Q 005444 246 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 246 ~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
++.++++|...... ......|...+...+. ..++|+||.+.+.+++.. ...+..
T Consensus 47 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~---~~~~d~v~~~~~~~~~~~------------~~~~~~ 100 (370)
T d2iw1a1 47 AFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLK---EHPADRVVGFNKMPGLDV------------YFAADV 100 (370)
T ss_dssp TCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHH---HSCCSEEEESSCCTTCSE------------EECCSC
T ss_pred ceEEEEcCcccccc-----------chhhHHHHHHHHHHHH---hcccceeeecccCchHHH------------HHHhhc
Confidence 46777777543210 0111233333333333 348999998776543211 001100
Q ss_pred CccCCC--CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 326 EKTKYP--DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 326 ~~~~~~--~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
...... ..... ......++....+....+....++.+++.+...++.... ..+. ..
T Consensus 101 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~--~~ 158 (370)
T d2iw1a1 101 CYAEKVAQEKGFL-YRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQK-------------------HYQT--EP 158 (370)
T ss_dssp CHHHHHHHHCCHH-HHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHH-------------------HHCC--CG
T ss_pred ccceeeeeecCcc-ccccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHH-------------------hcCC--Cc
Confidence 000000 00000 011111111111212223445678888888776542111 1122 26
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.+.+......+ ...++.+|+ ++++++|+++||+.+.||++.+++|++++.
T Consensus 159 ~~i~vi~~gv~~~~~~~~~~~~~~---------------~~~r~~~~~--~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~ 221 (370)
T d2iw1a1 159 ERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALASLP 221 (370)
T ss_dssp GGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHTSC
T ss_pred ceEEEEEeecccccccccCchhhh---------------hhhhhccCC--CccceEEEEEeccccccchhhhcccccccc
Confidence 789999999998876553221111 011234666 678899999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++..++++|++.. .+.++++++++++.++++|+|.+ +++..+++. +|++|+||..|+|
T Consensus 222 ~~~~~~~~~ii~g~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adv~v~ps~~E~~ 282 (370)
T d2iw1a1 222 ESLRHNTLLFVVGQDK------------PRKFEALAEKLGVRSNVHFFSGR------NDVSELMAA-ADLLLHPAYQEAA 282 (370)
T ss_dssp HHHHHTEEEEEESSSC------------CHHHHHHHHHHTCGGGEEEESCC------SCHHHHHHH-CSEEEECCSCCSS
T ss_pred cccccceeeecccccc------------ccccccccccccccccccccccc------ccccccccc-ccccccccccccc
Confidence 7777788888887765 34678889999999999999943 357888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEE-CCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~-~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
|++++|||+||+|||+|+.||.+|++.++.+|+++ +|+|+++++++|.+++ .|++.+++|+++|++++ +.|+|.
T Consensus 283 ~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll----~d~~~~~~~~~~ar~~~-~~~~~~ 357 (370)
T d2iw1a1 283 GIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQDLY 357 (370)
T ss_dssp CHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHSCCS
T ss_pred cceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhChh
Confidence 99999999999999999999999999999999765 7899999999998776 89999999999999998 567766
Q ss_pred HHHHHHHHHHH
Q 005444 643 IYSERLMTLAG 653 (696)
Q Consensus 643 ~~a~~l~~ly~ 653 (696)
.+.+++.++|.
T Consensus 358 ~~~~~~~~ii~ 368 (370)
T d2iw1a1 358 SLPEKAADIIT 368 (370)
T ss_dssp CHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66677777664
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=3.3e-24 Score=236.93 Aligned_cols=312 Identities=12% Similarity=0.050 Sum_probs=216.3
Q ss_pred CCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..-|+|++|++...+++..+.++ .+.+++++.|..++. +.. + +.......-...+..+|.|...+..
T Consensus 121 ~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~----~~~----f----r~lp~~~~il~~ll~~d~igf~~~~ 188 (456)
T d1uqta_ 121 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT----PEI----F----NALPTYDTLLEQLCDYDLLGFQTEN 188 (456)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCC----HHH----H----TTSTTHHHHHHHHTTSSEEEESSHH
T ss_pred cCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCC----hHH----h----ccCcchHHHHHHhhccccccccCHH
Confidence 34589999998887777666655 468899999975431 111 1 0011111123357789999998877
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHH--HHHhhhhcchhhhcCCcccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ--KRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~--~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
......+......... ...++ .....|- ..++.++|+|+|.+.|.+..... .....+ +.
T Consensus 189 ~~~~fl~~~~~ll~~~-~~~~~-~i~~~gr---~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l--------------~~ 249 (456)
T d1uqta_ 189 DRLAFLDCLSNLTRVT-TRSAK-SHTAWGK---AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQL--------------KA 249 (456)
T ss_dssp HHHHHHHHHHHHSCEE-EETTT-EEEETTE---EEEEEECCCCCCHHHHHHHHHSCCCHHHHHH--------------HH
T ss_pred HHHHHHHHHHHHhCcc-cccCC-eEEecCc---eeeeeeecCcccchhhhhhcccHHHHHHHHH--------------HH
Confidence 6553322211110000 00000 0001111 23788999999988764321110 000000 00
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH--
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-- 521 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~-- 521 (696)
. ..++++|+++||+++.||++.+++|+.++.+.+| .+.|+++|.+.. ....+..+...++.+++.+
T Consensus 250 ~-----~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~---~~~~~~~~~~~ev~~lv~~in 321 (456)
T d1uqta_ 250 E-----LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRHQLENEAGRIN 321 (456)
T ss_dssp H-----TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHHHHHHHHHHHH
T ss_pred h-----cCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcc---cchHHHHHHHHHHHHHHHHHH
Confidence 1 3578899999999999999999999999866655 467888887654 3334444455555555544
Q ss_pred -----cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc-----EEEcCCCCcchhhcc
Q 005444 522 -----YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP-----TFATCHGGPAEIIEH 591 (696)
Q Consensus 522 -----~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP-----Vvat~~gG~~EiI~d 591 (696)
.+..+.+.+.+ .++..++..+++. ||++++||..||||++++|||+||+| +|+|+.+|.++.+.+
T Consensus 322 ~~~~~~~~~~~v~~~~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~ 396 (456)
T d1uqta_ 322 GKYGQLGWTPLYYLNQ----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS 396 (456)
T ss_dssp HHHCBTTBCSEEEECS----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT
T ss_pred hhhccCCCCceeeccC----CcCHHHHhHHHhh-hceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC
Confidence 35667788887 7888999999995 99999999999999999999999999 999999999999853
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+...++.+++-++
T Consensus 397 ---g~lVnP~d~~~~A~ai~~aL~---~~~~er~~~~~~~~~~v-~~~~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 397 ---ALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVI-VKNDINHWQECFISDLK 451 (456)
T ss_dssp ---SEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHH
T ss_pred ---eEEECcCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH
Confidence 899999999999999988773 47789999999999999 67999999888776544
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=5.6e-25 Score=215.25 Aligned_cols=190 Identities=16% Similarity=0.184 Sum_probs=150.5
Q ss_pred CCcCCCCCCCchH---HHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEcccc-ccCChHHHHHHHHHhhc--c
Q 005444 412 GADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ--L 485 (696)
Q Consensus 412 GvD~~~f~p~~~~---~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~Llea~~~l~~--~ 485 (696)
|||++.|.|.... ..+.+ ..++.+|+ +++++|+|+||++ ++||++.+++++..+.+ .
T Consensus 1 gid~~~~~~~~~~~~~~~~~~--------------~~~~~~~l---~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~ 63 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKK--------------SLLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE 63 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHH--------------HHHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGG
T ss_pred CcChhhcCCCCCCchhHHHHH--------------HHHHHhCC---CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccC
Confidence 8899999775321 11111 11234675 5778899999997 58999999999999864 3
Q ss_pred CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcH
Q 005444 486 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL 565 (696)
Q Consensus 486 ~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 565 (696)
.++++|+|+|.|.+ ........+.+.+ .+.+.+.| .++.+++..+++. +|++|+||.+|+||+
T Consensus 64 ~~~~~l~i~G~g~~----------~~~~~~~~~~~~~--~~~~~~~~----~~~~~~l~~~~~~-~di~v~ps~~e~~~~ 126 (196)
T d2bfwa1 64 FQEMRFIIIGKGDP----------ELEGWARSLEEKH--GNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGL 126 (196)
T ss_dssp GGGEEEEEECCBCH----------HHHHHHHHHHHHC--TTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCH
T ss_pred CCCeEEEEEeeccc----------chhhhhhhhhhcc--ceeEEeee----ccccccchhcccc-ccccccccccccccc
Confidence 47899999998854 1122333444443 44566666 6778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 566 TVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 566 tvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
+++|||+||+|||+|+.|+..|++.+ .+|++++|+|+++++++|.+++. .+++.+++|+++|++++ .+||
T Consensus 127 ~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a-~~fs 196 (196)
T d2bfwa1 127 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSRSDLSKFRENCKKRA-MSFS 196 (196)
T ss_dssp HHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-HHTC
T ss_pred cchhhhhcCceeeecCCCccceeecC-CceeeECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HhCC
Confidence 99999999999999999999998855 59999999999999999988763 58999999999999998 5576
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=2.2e-22 Score=191.47 Aligned_cols=152 Identities=20% Similarity=0.303 Sum_probs=124.1
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
...++|+||+.+.||++.+++|+.++ ++.+|+|+|.+.+.. +.+.+.+.+.+.. .++|+|+|
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~---------~~~~~~~~~~~~~-~~~v~~~g---- 73 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGD---------HAERYARKIMKIA-PDNVKFLG---- 73 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTS---------THHHHHHHHHHHS-CTTEEEEE----
T ss_pred CCEEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEeccccc---------chhhhhhhhcccc-cCcEEEee----
Confidence 35688999999999999999999877 467899999876511 1333444444443 46899999
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGK 616 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~ 616 (696)
.++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++
T Consensus 74 ~~~~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~-- 149 (166)
T d2f9fa1 74 SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS-- 149 (166)
T ss_dssp SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH--
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH--
Confidence 7788999999995 99999999999999999999999999999999999999999999998875 8999999998877
Q ss_pred hhcCHHHHHHHHHHHHHHH
Q 005444 617 CKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 617 l~~dp~~~~~m~~~a~~~v 635 (696)
+|++. +++++++++
T Consensus 150 --~~~~~---~~~~~~~~a 163 (166)
T d2f9fa1 150 --KNPDK---FKKDCFRRA 163 (166)
T ss_dssp --HCTTT---THHHHHHHH
T ss_pred --hCHHH---HHHHHHHHH
Confidence 66642 334444444
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.25 E-value=1.1e-10 Score=122.27 Aligned_cols=80 Identities=15% Similarity=0.105 Sum_probs=61.6
Q ss_pred CCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCe
Q 005444 523 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGAS 594 (696)
Q Consensus 523 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~ 594 (696)
...++|.+.| +++..++ +. .+|+||..+ -..|+.|||++|+|+|+....+ .++.+++.+.
T Consensus 267 ~~~~~v~i~~----~~p~~~l---l~-~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~ 334 (391)
T d1pn3a_ 267 DDGADCFVVG----EVNLQEL---FG-RVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGV 334 (391)
T ss_dssp SCCTTCCEES----SCCHHHH---HT-TSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTS
T ss_pred cCCCCEEEec----ccCHHHH---Hh-hccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCC
Confidence 3567899998 5555554 45 499999873 3578999999999999976544 3667777788
Q ss_pred EEEECCCC--HHHHHHHHHHHH
Q 005444 595 GFHIDPYH--PDQAAELMADFF 614 (696)
Q Consensus 595 G~l~~p~d--~e~la~~I~~~l 614 (696)
|..++..+ +++++++|.+++
T Consensus 335 g~~l~~~~~~~~~l~~~i~~~l 356 (391)
T d1pn3a_ 335 GVAVDGPVPTIDSLSAALDTAL 356 (391)
T ss_dssp EEEECCSSCCHHHHHHHHHHHT
T ss_pred EEEcCcCCCCHHHHHHHHHHHh
Confidence 99998765 889999997765
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=3.8e-09 Score=108.92 Aligned_cols=112 Identities=14% Similarity=0.046 Sum_probs=77.7
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC---C----cchhhccCCeEE
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---G----PAEIIEHGASGF 596 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g---G----~~EiI~dg~~G~ 596 (696)
...++...++.. ++..+|+. +|++|.- +-+.|+.||++||+|+|....+ + .++.+++.+.|+
T Consensus 229 ~~~~~~v~~f~~------~~~~lm~~-adl~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~ 297 (351)
T d1f0ka_ 229 GQPQHKVTEFID------DMAAAYAW-ADVVVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAK 297 (351)
T ss_dssp TCTTSEEESCCS------CHHHHHHH-CSEEEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEE
T ss_pred ccccceeeeehh------hHHHHHHh-Cchhhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEE
Confidence 345677777533 36778885 9999974 3458999999999999986432 2 245566777899
Q ss_pred EECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 597 HIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 597 l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.++..+ .+.+.++| ..+ +++.+.+|++++++.. ..-.++.+++.++++.+
T Consensus 298 ~~~~~~~~~e~l~~~l----~~l--~~~~~~~~~~~~~~~~-~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 298 IIEQPQLSVDAVANTL----AGW--SRETLLTMAERARAAS-IPDATERVANEVSRVAR 349 (351)
T ss_dssp ECCGGGCCHHHHHHHH----HTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHT
T ss_pred EechhhCCHHHHHHHH----Hhh--CHHHHHHHHHHHHccC-CccHHHHHHHHHHHHHh
Confidence 886433 45555555 332 7788889999888653 44568888888888754
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.06 E-value=1.5e-09 Score=113.85 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=67.2
Q ss_pred CCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEE
Q 005444 523 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHI 598 (696)
Q Consensus 523 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~ 598 (696)
.+.++|++.+ .++..++ +. .+|+||. .+...++.||+++|+|+|+....+ .++.+++.+.|..+
T Consensus 283 ~~~~~v~~~~----~~p~~~l---l~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l 350 (401)
T d1rrva_ 283 DDRDDCFAID----EVNFQAL---FR-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (401)
T ss_dssp CCCTTEEEES----SCCHHHH---GG-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCcHHH---hh-hccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc
Confidence 4678899998 5665554 44 4999996 577789999999999999987666 56777777899999
Q ss_pred CCCC--HHHHHHHHHHHHHhhhcCHHHHHH
Q 005444 599 DPYH--PDQAAELMADFFGKCKENPSHWKK 626 (696)
Q Consensus 599 ~p~d--~e~la~~I~~~l~~l~~dp~~~~~ 626 (696)
+..+ ++.++++|.+++ +|+.+++
T Consensus 351 ~~~~~~~~~L~~ai~~vl-----~~~~r~~ 375 (401)
T d1rrva_ 351 DGPTPTFESLSAALTTVL-----APETRAR 375 (401)
T ss_dssp SSSCCCHHHHHHHHHHHT-----SHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHh-----CHHHHHH
Confidence 8764 888999997765 5655443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.93 E-value=1.9e-08 Score=104.70 Aligned_cols=80 Identities=15% Similarity=0.030 Sum_probs=62.4
Q ss_pred CCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEE
Q 005444 523 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHI 598 (696)
Q Consensus 523 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~ 598 (696)
.+.++|++.+ .++..++ +. .+|+||. .+.+.|+.||+++|+|+|+....+ .++.+++.+.|..+
T Consensus 282 ~~~~nv~~~~----~~p~~~~---l~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l 349 (401)
T d1iira_ 282 DDGADCFAIG----EVNHQVL---FG-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH 349 (401)
T ss_dssp SCGGGEEECS----SCCHHHH---GG-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCHHHH---Hh-hcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc
Confidence 3567899998 5555444 45 4999995 688899999999999999975544 56667777789998
Q ss_pred CCC--CHHHHHHHHHHHH
Q 005444 599 DPY--HPDQAAELMADFF 614 (696)
Q Consensus 599 ~p~--d~e~la~~I~~~l 614 (696)
+.. ++++++++|.+++
T Consensus 350 ~~~~~~~~~l~~ai~~~l 367 (401)
T d1iira_ 350 DGPIPTFDSLSAALATAL 367 (401)
T ss_dssp SSSSCCHHHHHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHHh
Confidence 876 5899999997765
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=1.5e-07 Score=106.82 Aligned_cols=143 Identities=14% Similarity=0.020 Sum_probs=106.7
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHH----HHHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVE----CYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle----a~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
+.|...+++...++++-|+...|..+.++. .+..+... ...+.|++.|...+ .|..-++.++.+.+++
T Consensus 517 ~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP----~d~~gK~iIk~I~~va 592 (796)
T d1l5wa_ 517 RTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 592 (796)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHH
T ss_pred hcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCC----chHHHHHHHHHHHHHH
Confidence 345555889999999999999999888543 33444332 11377888886654 3566666677777666
Q ss_pred HHcC----C--CCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KTYK----L--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~~~----L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+..+ + ..+|.|+. .. +-++.+.+-.++||-.+.+. .|+.|.+-+=||.-|.+.++|-.|...|+.++
T Consensus 593 ~~in~dp~~~~~~kVVFle----nY-dv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~ 667 (796)
T d1l5wa_ 593 DVINNDPLVGDKLKVVFLP----DY-CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK 667 (796)
T ss_dssp HHHHTCTTTGGGEEEEECS----SC-CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHhcCChhhccceeEEEeC----CC-chHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHh
Confidence 5332 1 22688886 23 34677777778999999876 79999999999999999999999999999865
Q ss_pred --CCeEEEEC
Q 005444 592 --GASGFHID 599 (696)
Q Consensus 592 --g~~G~l~~ 599 (696)
+.|||.|-
T Consensus 668 vg~eN~f~fG 677 (796)
T d1l5wa_ 668 VGEENIFIFG 677 (796)
T ss_dssp HCGGGSEECS
T ss_pred cCccceEEec
Confidence 78999994
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.63 E-value=5.2e-07 Score=102.51 Aligned_cols=221 Identities=11% Similarity=0.046 Sum_probs=142.3
Q ss_pred HHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCc-hHHHHH-hhh
Q 005444 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS-EKQKRL-TAL 431 (696)
Q Consensus 354 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~-~~~~r~-~~~ 431 (696)
.+++..+..+-.+|.-.-+-+++.+-. .+ ....+.||.-|.|||....+.... ..-..+ ...
T Consensus 432 ~Lal~~S~~vNGVSklH~ev~~~~~~~----------~~------~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ 495 (824)
T d2gj4a1 432 HLCIAGSHAVNGVARIHSEILKKTIFK----------DF------YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAER 495 (824)
T ss_dssp HHHHHTCSCEEESSHHHHHHHHHTTTH----------HH------HHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHH
T ss_pred HHHHHhchhHHHHHHHHHHHHHHhhcc----------cc------ccCCCcceecccCcccCccchhccCHHHHHHHHhh
Confidence 456777888888887665544443310 01 123367899999999988775321 111000 000
Q ss_pred -----h---cchhh---hcCC--------------ccc----cccccCCCCCCCCCEEEEEccccccCChHH----HHHH
Q 005444 432 -----H---GSIEQ---LLFD--------------PEQ----NDEHVGTLSDRSKPIVFSMARLDHVKNMTG----LVEC 478 (696)
Q Consensus 432 -----~---~~~~~---~l~~--------------~~~----~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~----Llea 478 (696)
. ..+.+ ...+ +.. ..++.|+..+++...++++-|+...|.... ++..
T Consensus 496 ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~l 575 (824)
T d2gj4a1 496 IGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITL 575 (824)
T ss_dssp HCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHH
T ss_pred hccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHH
Confidence 0 00000 0000 000 122345555899999999999999999988 3334
Q ss_pred HHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC------CcEEEeccccccCChhHHHHHHH
Q 005444 479 YGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD------GQFRWIAAQTNRARNGELYRYIA 548 (696)
Q Consensus 479 ~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~------~~V~flG~~~~~v~~~el~~~la 548 (696)
+.++++. ...+.+++.|...+ .|..-++.++.+.++++-.+.. .+|.|+. .. +-.+.+.+-
T Consensus 576 y~rlk~~~~~~~~P~q~IFaGKAhP----~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFle----nY-~v~lA~~li 646 (824)
T d2gj4a1 576 YNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NY-RVSLAEKVI 646 (824)
T ss_dssp HHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TC-CHHHHHHHG
T ss_pred HHHhhhcccCCCCCeEEEEeCCCCC----ccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcC----CC-chHHHHHhh
Confidence 4555432 12467888776554 3556666677777666543322 2688886 23 345667776
Q ss_pred ccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--CCeEEEEC
Q 005444 549 DTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASGFHID 599 (696)
Q Consensus 549 ~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--g~~G~l~~ 599 (696)
.++||-.+.|. .|+.|.+=+=||.-|.+.++|-.|...|+.++ +.|||.|-
T Consensus 647 ~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG 701 (824)
T d2gj4a1 647 PAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred hhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeC
Confidence 68999999886 89999999999999999999999999998875 77999984
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.22 E-value=3.3e-05 Score=81.15 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=53.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhh-ccCCeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI-~dg~~G~l~~ 599 (696)
.+++.+.. ..+..++. ... .+++||. =|-..++.||+.+|+|+|+... ...+.-+ +..+.|+.++
T Consensus 329 ~~n~~v~~----~~pq~~~l-~~p-~~~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~ 398 (461)
T d2acva1 329 EGKGMICG----WAPQVEVL-AHK-AIGGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 398 (461)
T ss_dssp HCSEEEES----SCCHHHHH-HST-TEEEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCCeEEEe----cCCHHHHH-hcc-cCCEEEe----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEee
Confidence 34565554 33333333 223 4789986 3556799999999999999743 3444554 5567899886
Q ss_pred CC--------CHHHHHHHHHHHH
Q 005444 600 PY--------HPDQAAELMADFF 614 (696)
Q Consensus 600 p~--------d~e~la~~I~~~l 614 (696)
.. +.++++++|.+++
T Consensus 399 ~~~~~~~~~~t~~~l~~a~~~vl 421 (461)
T d2acva1 399 VDYRKGSDVVAAEEIEKGLKDLM 421 (461)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHT
T ss_pred ccccccCCccCHHHHHHHHHHHh
Confidence 43 5788888887766
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.21 E-value=0.00024 Score=74.10 Aligned_cols=252 Identities=12% Similarity=0.074 Sum_probs=155.0
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+|..+.-.. .+.++++|..+++|+++ +|+-..+. ++.-...+...+ ...-+-||.-+|+++
T Consensus 86 ~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg----~~~~~~~de~~R--------~~iskls~~hf~~t~ 152 (373)
T d1v4va_ 86 EMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSG----NLKEPFPEEANR--------RLTDVLTDLDFAPTP 152 (373)
T ss_dssp HTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCS----CTTSSTTHHHHH--------HHHHHHCSEEEESSH
T ss_pred hcCcccccccccCccchhHHHHHHHhhhhhee-eccccccc----ccccCcchhhhh--------hhhccccceeeecch
Confidence 34999998776443 66778888999999765 44432221 110001122222 123457899999998
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
...+... ..+..+.++.++-+ ++|. -..... +. ..
T Consensus 153 ~~~~~L~----------------------~~Ge~~~~I~~vG~p~~D~---------i~~~~~----~~---------~~ 188 (373)
T d1v4va_ 153 LAKANLL----------------------KEGKREEGILVTGQTGVDA---------VLLAAK----LG---------RL 188 (373)
T ss_dssp HHHHHHH----------------------TTTCCGGGEEECCCHHHHH---------HHHHHH----HC---------CC
T ss_pred hhhhhhh----------------------hhcccccceeecccchhhH---------HHhhhh----hc---------cc
Confidence 8755221 11222556666543 2331 110000 00 00
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
.... ..++++++++-|....++...+.+++..+.+...++.+++...... .....+. +......+
T Consensus 189 ~~~~--~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~----------~~~~~~~---~~~~~~~n 253 (373)
T d1v4va_ 189 PEGL--PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAVF---PVLKGVRN 253 (373)
T ss_dssp CTTC--CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHHH---HHHTTCTT
T ss_pred cccc--ccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc----------cchhhhh---hhhccccc
Confidence 0111 4556677888887777788888888888877777888776654322 1112222 23344567
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCHHHH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQA 606 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~e~l 606 (696)
+.++. .++..+...+++. |++++- .-|-.+.||.++|+|+|.- +.|.-.+-++.|.+ +++ +.|.+++
T Consensus 254 ~~~~~----~l~~~~~l~ll~~-s~~vig-----nSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv-~~d~~~I 321 (373)
T d1v4va_ 254 FVLLD----PLEYGSMAALMRA-SLLLVT-----DSGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLA-GTDPEGV 321 (373)
T ss_dssp EEEEC----CCCHHHHHHHHHT-EEEEEE-----SCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EEC-CSCHHHH
T ss_pred ceeec----cchHHHHHHHhhh-ceeEec-----ccchhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEc-CCCHHHH
Confidence 99987 7888999999985 777664 3367788999999999987 55777777766644 444 4589998
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHH
Q 005444 607 AELMADFFGKCKENPSHWKKISD 629 (696)
Q Consensus 607 a~~I~~~l~~l~~dp~~~~~m~~ 629 (696)
..++..++ .++..+..+..
T Consensus 322 ~~~i~~~l----~~~~~~~~~~~ 340 (373)
T d1v4va_ 322 YRVVKGLL----ENPEELSRMRK 340 (373)
T ss_dssp HHHHHHHH----TCHHHHHHHHH
T ss_pred HHHHHHHH----cCHHHHhhccc
Confidence 88886655 78887776543
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.04 E-value=5.4e-05 Score=79.64 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=59.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhcc-CCeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEH-GASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~d-g~~G~l~~ 599 (696)
.+++.... .++..++.. .. .+++||.= |-..++.||+.+|+|+|+....+ .+.-+++ .+.|..++
T Consensus 318 ~~nv~~~~----~~pq~~lL~-hp-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 318 RGYGMVVP----WAPQAEVLA-HE-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred cccccccc----cCChHhhhc-cC-ceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 45677776 555545442 12 36788863 55679999999999999985544 4444544 57999887
Q ss_pred CC--CHHHHHHHHHHHHHhhhcCHHH
Q 005444 600 PY--HPDQAAELMADFFGKCKENPSH 623 (696)
Q Consensus 600 p~--d~e~la~~I~~~l~~l~~dp~~ 623 (696)
.. +.+++.++|.+++ +|+.+
T Consensus 388 ~~~~t~~~l~~ai~~vL----~d~~y 409 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQIL----SQEKG 409 (450)
T ss_dssp GGSCCHHHHHHHHHHHH----HSHHH
T ss_pred CCCcCHHHHHHHHHHHh----cCcHH
Confidence 65 6788888887776 78765
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.85 E-value=0.00038 Score=72.81 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=64.4
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhh-ccCCeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI-~dg~~G~l~~ 599 (696)
.+||.... .++..++.. .. .+++||.= |-..++.||+.+|+|.|+... ...+.-+ +..+.|..++
T Consensus 345 ~~Nv~~~~----~~Pq~~lL~-hp-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIAS----WCPQDKVLN-HP-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred cCceEEee----eCCHHHHhc-CC-cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 46788876 566555531 02 36788863 556799999999999999843 3455545 4447899988
Q ss_pred CC-CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 600 PY-HPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 600 p~-d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
.+ +.++++++|.+++ .|+.. +++.++|.+
T Consensus 415 ~~~t~~~l~~ai~~vl----~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 415 TNVKREELAKLINEVI----AGDKG-KKMKQKAME 444 (473)
T ss_dssp SSCCHHHHHHHHHHHH----TSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH----cCChH-HHHHHHHHH
Confidence 54 7889999997777 78763 334455544
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.82 E-value=0.0021 Score=66.73 Aligned_cols=259 Identities=15% Similarity=0.109 Sum_probs=138.2
Q ss_pred HHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhh
Q 005444 280 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 280 ~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
.+.+.+.+. +||+|.++.-.. .+.++++|..+++|+++ +|+-+.+. +..+...+...+. ..-+
T Consensus 79 ~~~~~~~~~---kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~----~~~~~~~de~~R~--------~isk 142 (377)
T d1o6ca_ 79 RLDELFKDI---KPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTG----NKYSPFPEELNRQ--------MTGA 142 (377)
T ss_dssp HHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCS----CTTTTTTHHHHHH--------HHHH
T ss_pred hhhhhhhhc---ccceeEeeecccccchhhhhhhhccceEEE-Eecccccc----cccccCchhhhcc--------cccc
Confidence 334444444 999999886543 67888999999999754 55543322 1111122333321 2345
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhh
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQ 437 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~ 437 (696)
-||..+++++...+.+. ..+..+.++.++-+ ++|. -.. ....
T Consensus 143 ls~~hf~~t~~~~~~L~----------------------~~G~~~~~I~~vG~~~~D~---------i~~---~~~~--- 185 (377)
T d1o6ca_ 143 IADLHFAPTGQAKDNLL----------------------KENKKADSIFVTGNTAIDA---------LNT---TVRD--- 185 (377)
T ss_dssp HCSEEEESSHHHHHHHH----------------------HTTCCGGGEEECCCHHHHH---------HHH---HCCS---
T ss_pred ceeEEeecchhhhhhhh----------------------hhccccceEeeccchhHHH---------HHH---HHHH---
Confidence 79999999988754211 11222556776654 2331 000 0000
Q ss_pred hcCCccccccccCCCCCCCCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHH
Q 005444 438 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 516 (696)
Q Consensus 438 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~ 516 (696)
......+..+ ..++.++++.-|.... +.....+..+..+....+++.+++...... ...
T Consensus 186 -----~~~~~~~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~ 245 (377)
T d1o6ca_ 186 -----GYSHPVLDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNP--------------VVR 245 (377)
T ss_dssp -----SCCCSTTTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----C--------------HHH
T ss_pred -----HHhhhhhhhc-cCCceEEEEeccccccccchHHHHHHHHhhccccccccccccccccc--------------ccc
Confidence 0000111211 2345566666665543 233344454544444445666655543322 112
Q ss_pred H-HHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCe
Q 005444 517 E-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGAS 594 (696)
Q Consensus 517 ~-li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~ 594 (696)
. +.+.+...++|.++. .++..++..++.. |+++|- ..|-.+.||-..|+|+|.-.. +.-.+.+..| +
T Consensus 246 ~~~~~~~~~~~ni~~~~----~l~~~~fl~llk~-s~~vIg-----nSss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~ 314 (377)
T d1o6ca_ 246 EAAHKHFGDSDRVHLIE----PLEVIDFHNFAAK-SHFILT-----DSGGVQEEAPSLGKPVLVLRDTTERPEGVEAG-T 314 (377)
T ss_dssp HHHHHC--CCSSEEECC----CCCHHHHHHHHHH-CSEEEE-----C--CHHHHGGGGTCCEEEECSCCC---CTTTT-S
T ss_pred hhhhhccccccceEecc----ccchHHHHHHHhh-hheeec-----ccchhHHhhhhhhceEEEeCCCCcCcchhhcC-e
Confidence 2 223344567899997 7888999999996 888773 235568899999999998643 4455555555 4
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 595 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 595 G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
-+++++ |.+++.+++..++ .++..++.+
T Consensus 315 nilv~~-~~~~I~~~i~~~l----~~~~~~~~~ 342 (377)
T d1o6ca_ 315 LKLAGT-DEENIYQLAKQLL----TDPDEYKKM 342 (377)
T ss_dssp SEEECS-CHHHHHHHHHHHH----HCHHHHHHH
T ss_pred eEECCC-CHHHHHHHHHHHH----hChHHHhhh
Confidence 455665 7888888886655 677766544
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.0016 Score=67.76 Aligned_cols=254 Identities=14% Similarity=0.109 Sum_probs=142.5
Q ss_pred CCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
+||+|.++.-. ..+.+++++..+++|+++ +|+-+.+. +..+...+...+. ..-+-||.-+|+++..
T Consensus 86 kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s~----~~~~~~pde~~R~--------~iskls~~hf~~~~~~ 152 (376)
T d1f6da_ 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRTG----DLYSPWPEEANRT--------LTGHLAMYHFSPTETS 152 (376)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCCS----CTTSSTTHHHHHH--------HHHHTCSEEEESSHHH
T ss_pred cCcceeeeccccchhhHHHHHHhhCceEEE-Eecccccc----cccccCchhhhhh--------hhccceeEEEeccHHH
Confidence 99999887643 367888889999999754 55543322 1111122333321 2335789999999886
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCC-C---CchHHHHHhhhhcchhhhcCCcccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYF-P---YSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~-p---~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
.+... ..+..+.++.++-+ ++|.-... + ....... +.+
T Consensus 153 ~~~L~----------------------~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~---------~~~------ 195 (376)
T d1f6da_ 153 RQNLL----------------------RENVADSRIFITGNTVIDALLWVRDQVMSSDKLRS---------ELA------ 195 (376)
T ss_dssp HHHHH----------------------HTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHH---------HHH------
T ss_pred HhHHH----------------------hcCCCccccceecCchHHHHHHHHhhhhccchhhh---------hhh------
Confidence 54221 11222567777654 33420000 0 0000000 000
Q ss_pred ccccCCCCCCCCCEEEEEccccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
..++.....++.++++.=|... .+++..++.++..+.....++.+++-..... ....... +.+..
T Consensus 196 -~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~----------~~~~~~~---~~~~~ 261 (376)
T d1f6da_ 196 -ANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVREPVN---RILGH 261 (376)
T ss_dssp -TTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHHHH---HHHTT
T ss_pred -ccccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccch----------hhhhhHh---hhhcc
Confidence 0011111233444555444442 3455667777777766666777766553322 1111222 22344
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCeEEEECCCCH
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~G~l~~p~d~ 603 (696)
..++.++. .....+...++.. |++++-= .|-.+.||-..|+|+|.=.. ..-.+-+..+ +-.+++ .|.
T Consensus 262 ~~ni~~~~----~l~~~~fl~ll~~-a~~vign-----Sssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~-~~~ 329 (376)
T d1f6da_ 262 VKNVILID----PQEYLPFVWLMNH-AWLILTD-----SGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVG-TDK 329 (376)
T ss_dssp CTTEEEEC----CCCHHHHHHHHHH-CSEEEES-----SSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECC-SSH
T ss_pred cccceeec----cccHHHHHHHHhh-ceEEEec-----CcchHhhHHHhCCCEEEcCCCccCccceecC-eeEECC-CCH
Confidence 56799987 7788889999985 8887743 35567899999999997532 3344555444 556665 489
Q ss_pred HHHHHHHHHHHHhhhcCHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~ 625 (696)
+++.+++.+++ .++..+.
T Consensus 330 ~~I~~ai~~~l----~~~~~~~ 347 (376)
T d1f6da_ 330 QRIVEEVTRLL----KDENEYQ 347 (376)
T ss_dssp HHHHHHHHHHH----HCHHHHH
T ss_pred HHHHHHHHHHH----hChHhhh
Confidence 99988887665 5665443
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.40 E-value=0.011 Score=61.08 Aligned_cols=85 Identities=14% Similarity=0.139 Sum_probs=58.8
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC----Ccchhh-ccCCeEEEE
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEII-EHGASGFHI 598 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g----G~~EiI-~dg~~G~l~ 598 (696)
..++|.+.+ .++..++... . .+++||. =|-..++.||+.+|+|+|+.... ..+..+ +.-+.|+.+
T Consensus 332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l 401 (471)
T d2vcha1 332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 401 (471)
T ss_dssp TTTEEEEES----CCCHHHHHHS-T-TEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred cCCCeeecc----cCCHHHHhcC-c-cCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEE
Confidence 357898887 6666665531 1 3678886 34556999999999999998443 344444 334678876
Q ss_pred CCC-----CHHHHHHHHHHHHHhhhcCHH
Q 005444 599 DPY-----HPDQAAELMADFFGKCKENPS 622 (696)
Q Consensus 599 ~p~-----d~e~la~~I~~~l~~l~~dp~ 622 (696)
... +.++++++|.+++ +|++
T Consensus 402 ~~~~~~~~t~~~l~~ai~~vl----~~~~ 426 (471)
T d2vcha1 402 RAGDDGLVRREEVARVVKGLM----EGEE 426 (471)
T ss_dssp CCCTTSCCCHHHHHHHHHHHH----TSTH
T ss_pred ecCCCCcCCHHHHHHHHHHHh----CCcH
Confidence 543 6788899997777 6764
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.14 Score=50.80 Aligned_cols=103 Identities=15% Similarity=0.065 Sum_probs=64.5
Q ss_pred CCCCCEE-EEEc-cccccCC--hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC---CCC
Q 005444 454 DRSKPIV-FSMA-RLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK---LDG 526 (696)
Q Consensus 454 ~~~k~iI-l~vG-RL~~~Kg--i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~---L~~ 526 (696)
..+++.| +..| +-.+.|. .+..++.+..+.+. +.+++++|+..+ .+....+.+... ...
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e------------~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAW 242 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTT
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccch------------HHHHHHHHHhhhcccccc
Confidence 3445554 4443 3344455 34466677776653 577888887655 222333332221 123
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
-+.+.| ..+..|+..++.. +|++|.+. +-.+--|.++|+|+|+=
T Consensus 243 ~~~l~g----~~sl~el~~li~~-a~l~I~~D-----tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 243 CRNLAG----ETQLDQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EEECTT----TSCHHHHHHHHHT-SSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred cccccC----CccHHHHHHHHhc-ceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence 345566 6778999999995 99999873 23568899999999995
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=86.82 E-value=0.98 Score=42.28 Aligned_cols=99 Identities=24% Similarity=0.343 Sum_probs=50.5
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccc-----
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR----- 237 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~----- 237 (696)
||||++|++|-- ..++| .||. ...++++|++|. ++++|..-....+.. ..+
T Consensus 1 m~~VLvi~aHPD---De~lg---~GGt---------------iak~~~~G~~V~--vv~~T~G~~~~~~~~-~~R~~E~~ 56 (227)
T d1uana_ 1 MLDLLVVAPHPD---DGELG---CGGT---------------LARAKAEGLSTG--ILDLTRGEMGSKGTP-EEREKEVA 56 (227)
T ss_dssp CEEEEEEESSTT---HHHHH---HHHH---------------HHHHHHTTCCEE--EEEEECCTTTCCSCH-HHHHHHHH
T ss_pred CceEEEEEeCCC---hHHHH---HHHH---------------HHHHHHcCCeEE--EEEEeCCCCCCCCch-hhhHHHHH
Confidence 589999999942 11222 2332 223688999998 666665432221110 001
Q ss_pred -eeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCC
Q 005444 238 -LERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 302 (696)
Q Consensus 238 -~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~ 302 (696)
.-.+.|.+.+.++..|-... ... ......+.+.+.+. +||+|++|+..
T Consensus 57 ~a~~~lG~~~~~~l~~~d~~l-----------~~~---~~~~~~l~~~i~~~---~PdiV~t~~~~ 105 (227)
T d1uana_ 57 EASRILGLDFRGNLGFPDGGL-----------ADV---PEQRLKLAQALRRL---RPRVVFAPLEA 105 (227)
T ss_dssp HHHHHHTCSEEEEEEECTTCC-----------CCC---HHHHHHHHHHHHHH---CEEEEEEECSC
T ss_pred hhhhhcccchheeeeeccccc-----------ccc---hhhhhhhhhheecc---cccEEEecCcc
Confidence 11223434445555543221 111 23333455555544 99999988754
|