Citrus Sinensis ID: 005513

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690---
Protein Sequence
MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccEEEEccccccHHHHHHcccccEEEEEEEcccccEEcccccEEEEEccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHccccccccccHHHHHHHHHHHHHHHcccccHcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHccHHHcccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccEEEEEEEEEcccccccccccccccccccEcccccccccccEEEcHcHHHHHHEEEEccccEEEEEEEccccccccccccEEEEcccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHccccccccccHcccccHHHHHHHHHcHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgsrvpgsfmqdpnnlsqvqkkprldikqEDIFQQQVLQQLLQrqdpvqlqgrnPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMqsanatkrpydsgvCARRLMQYLYHqrqrppdntIAYWRKFVAEYysprakkrwCLSLYdnvghhalgvfpqaamdawqcdicgsksgrgfeatfevlprlneikfgsgvidelmfldlprecrfpsgimmLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEEllprrlvaPQVNQLLQVAQKCQSTisesgsegisqqdlqtnSNMVLTAGRQLAKSLELqslndlgfskrYVRCLQISEVVSSMKDLINFCweqkvgpieglksfprHATAAKLQMQKMQEAEQLasvqglptdrnTLNKLIAlhpggmnnnmsnnyhmvgrgaLSGSAQAALALTNYQNLLMRqnsinsnpnslqqeaspsfsnsnqspsssfqgpasfipgsmqnlpvsgfssphlppqqpqqlqqrslsgnnllqqshpqssqgNQAMQQQMIQQLLQEMSnnnggvqqqslsgqangmmvrnglgfggnspaagappasapstsnvsgggvagpttsrsnsfkaatnseasapagnngfnQRAQDLQQNLHLQDDIDQDIANEftengffnndlddtmgwgmaatgrhd
Flexible Loop (DISEMBL)
mgsrvpgsfmqdpnnlsqVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLyhqrqrppdntiAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENgffnndlddtMGWGMAATGRHD
Low Complexity Region (SEG)
MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFqqqvlqqllqrqdpvqlqGRNPqlqallqqqqrlrqqqilqSMPPLqraqlqqqqqqqmqmrqqmqqqqqgmqSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTisesgsegisqqDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRgalsgsaqaalalTNYQNLLMRQNSINSNPNSLQQEAspsfsnsnqspsssfqGPASFIPGSMQNLPVSGFssphlppqqpqqlqqrslsGNNLLQQSHPqssqgnqamqqqmiqqllqemsNNNGGVQQQSLSGQANGMMVRNGLgfggnspaagappasapstsNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAqdlqqnlhlqddidqdIANEFTENGFFNNDLDDTMGWGMAATGRHD
Disordered region (IsUnstruct)
*********************************************************************************************************************GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQ*******************************QLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSF*********************************NKLIALH***********YHMVGRGALSGSAQAALALTNYQNLL********************************************************************************************************************************************************************************************************DIANEFTENGFFNNDLDDTMGWG********
Disordered Region (DISOPRED)
************************************************************************************************************************ARRLMQ***************YWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQ**************************************************LGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPI**********************************************************************************************************************************************************************************************************************************************************************************************NEFTENGFFNNDLDDTMGW*********
Disordered Region (DISEMBL)
*********MQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMP*************************************YDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVA******************DLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNP***********************GPASFIPGSMQNLPVSGF*****************LSGNN******************QMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSP*****************************************PAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Disordered Region (DISPRO)
**********************PRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQIL***PPLQRA************************S*N**KRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISES************NSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATA***************************************************************************************************************************************************************MQQQMIQQLLQEMSNNNG******L*GQANGMMVRNGLGFGGNSPAAGAPPASAPSTSN****GVAGPT****NSF*******************RAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGW*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQxxxxxxxxxxxxxxxxxxxxxxxxMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	693	2.2.26 [Sep-21-2011]
Q8W234	877	Transcriptional corepress	no	no	0.389	0.307	0.585	1e-94
O74364	391	Adhesion defective protei	yes	no	0.354	0.629	0.254	2e-11

>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1

 Score =  347 bits (891), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 161/275 (58%), Positives = 208/275 (75%), Gaps = 5/275 (1%)

Query: 115 YDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGV 174
           Y+ G+ A+RL QY+Y Q+ RP DN I +WRKFVAEY++P AKKRWC+S+Y + G    GV
Sbjct: 301 YEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQTTGV 359

Query: 175 FPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGI 234
           FPQ   D W C+IC  K GRGFEAT EVLPRL +IK+ SG ++EL+++D+PRE +  SG 
Sbjct: 360 FPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNSSGQ 416

Query: 235 MMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQ 294
           ++LEY KA QESV+E LR+VR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+Q
Sbjct: 417 IVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQVSQ 476

Query: 295 LLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRC 354
           L   AQK Q     + ++  +  +LQ N NM + + RQLAK+LE+  +NDLG++KRYVRC
Sbjct: 477 LGSAAQKYQQAAQNATTDS-ALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRC 535

Query: 355 LQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHA 389
           LQISEVV+SMKDLI++  E + GPIE L  FPR  
Sbjct: 536 LQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRT 570

DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression.
Arabidopsis thaliana (taxid: 3702)

>sp|O74364|ADN1_SCHPO Adhesion defective protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adn1 PE=3 SV=1

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 45/291 (15%)

Query: 118 GVCARRLMQY---LYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGV 174
           G    RL+QY   L    +    + I YWR+FV ++Y+ +   R+ +   D         
Sbjct: 18  GYGVLRLLQYNEQLMSGWESTMKDDIGYWRRFVHDFYTEKGTFRYNIDYKD--------- 68

Query: 175 FPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGI 234
                          ++  + FE ++  LPR   + +   +      L   +E   P+  
Sbjct: 69  -------------SPNQEPKLFELSYAALPRFLYLSYCGKLKKMSFLLGNTKEFAIPNNG 115

Query: 235 MMLEYGKAVQESVYEQ-LRIVREGQLRIIFTND--LKILSWEFCARRHEELLPRRLVAPQ 291
             +E  +A     Y+  ++++  G LR  F     LK+ S EF A  H E L R L+   
Sbjct: 116 YFVESSRASILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-N 174

Query: 292 VNQLLQVAQKCQSTISESG--SEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSK 349
            +  L  ++  Q+ I   G  SE  S + +  NS+         +  L    +N+ G   
Sbjct: 175 ASLALSQSRPPQNQIQHDGVKSEDPSSESVNINSS---------SSLLPDSPVNEYGLEP 225

Query: 350 RYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAA--KLQMQK 398
             +R ++I+E +S M+DLI F   Q+ GP   L  F   ATA   + QMQK
Sbjct: 226 HIMRFMEITETISGMRDLIAFTLAQRSGPTSALHKF---ATALQQQHQMQK 273


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.129    0.370 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,803,760
Number of Sequences: 539616
Number of extensions: 10561834
Number of successful extensions: 146340
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 801
Number of HSP's that attempted gapping in prelim test: 56614
Number of HSP's gapped (non-prelim): 35936
length of query: 693
length of database: 191,569,459
effective HSP length: 125
effective length of query: 568
effective length of database: 124,117,459
effective search space: 70498716712
effective search space used: 70498716712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Probable transcriptional regulator involved in cell adhesion.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	693
224122440	873	predicted protein [Populus trichocarpa]	0.981	0.778	0.787	0.0
359490401	864	PREDICTED: uncharacterized protein LOC10	0.978	0.784	0.755	0.0
255539545	745	Transcriptional corepressor SEUSS, putat	0.974	0.906	0.794	0.0
356559867	869	PREDICTED: uncharacterized protein LOC10	0.975	0.777	0.743	0.0
449451755	864	PREDICTED: uncharacterized protein LOC10	0.963	0.773	0.689	0.0
356559869	879	PREDICTED: uncharacterized protein LOC54	0.823	0.649	0.743	0.0
449522406	860	PREDICTED: uncharacterized protein LOC10	0.943	0.760	0.696	0.0
356530901	858	PREDICTED: uncharacterized protein LOC10	0.966	0.780	0.700	0.0
297741103	612	unnamed protein product [Vitis vinifera]	0.704	0.797	0.799	0.0
449446059	786	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.950	0.838	0.674	0.0

>gi|224122440|ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|222859510|gb|EEE97057.1| predicted protein [Populus trichocarpa]

 Score =  959 bits (2479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/706 (78%), Positives = 607/706 (85%), Gaps = 26/706 (3%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           MG R  GSF+QD NNLSQVQKKPRLDIKQEDI QQQ+LQQLLQRQD +QLQ RNPQLQ L
Sbjct: 176 MGPRGQGSFLQDHNNLSQVQKKPRLDIKQEDILQQQLLQQLLQRQDSMQLQNRNPQLQNL 235

Query: 61  LQQQQRLRQQQILQ-SMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQS------------ 107
           + Q +  +QQ  L  SMPPLQRAQLQQQQQQQ Q +QQ QQQQQ  Q             
Sbjct: 236 IHQHRLRQQQHQLLQSMPPLQRAQLQQQQQQQQQQQQQQQQQQQQQQQQMHLRQQMQQQA 295

Query: 108 ---ANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLY 164
              A+A KRP+D G+CARRLMQYLYHQRQR  +NTIAYWRKFV+EYYSPRAKKRWCLSLY
Sbjct: 296 MQPASALKRPFDGGICARRLMQYLYHQRQRLAENTIAYWRKFVSEYYSPRAKKRWCLSLY 355

Query: 165 DNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDL 224
           +NVGHHALGVFPQAAM+AWQCD+CGSKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLDL
Sbjct: 356 ENVGHHALGVFPQAAMEAWQCDLCGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDL 415

Query: 225 PRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLP 284
           PRE R  SGIMMLEY KAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLP
Sbjct: 416 PREFRLHSGIMMLEYAKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCARRHEELLP 475

Query: 285 RRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLND 344
           RR+VAPQVNQLLQVAQKCQSTI+ESGS+G+SQQDLQTNSNMVLTAGRQLAKSLELQSLND
Sbjct: 476 RRVVAPQVNQLLQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLND 535

Query: 345 LGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQ 404
           LGFSKRYVRCLQISEVV+SMKDLI+FC EQK GPIEGLKS+PRHATAAKLQMQKMQE EQ
Sbjct: 536 LGFSKRYVRCLQISEVVNSMKDLIDFCREQKAGPIEGLKSYPRHATAAKLQMQKMQEMEQ 595

Query: 405 LASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMR 464
           LASVQGLPTDRNT+NKL+ALHP G+NN++++N  MVGRGALSGSAQAALALTNYQNLLMR
Sbjct: 596 LASVQGLPTDRNTINKLMALHP-GINNHVNSNNQMVGRGALSGSAQAALALTNYQNLLMR 654

Query: 465 QNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQ 524
           QNS+NSN  SLQQEA+  FSNSNQSPSS+FQG A+FI GSMQNLPVSGFSSPH PPQQPQ
Sbjct: 655 QNSMNSNSCSLQQEAASPFSNSNQSPSSNFQGAANFIQGSMQNLPVSGFSSPHPPPQQPQ 714

Query: 525 QLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNN-GGVQQQSLSGQA-NGM 582
           QLQQRSLS N+LLQQS P+SS GNQ +Q QMI QLLQEMSNN+ GGVQQ S+S Q+ NG 
Sbjct: 715 QLQQRSLSSNSLLQQSLPRSSHGNQTLQPQMIHQLLQEMSNNSGGGVQQHSISRQSGNGG 774

Query: 583 MVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNG 642
           + R GLGFG NS A  AP A   ST +VS G   GP  S+SNSFKA  NS++SA  GN+G
Sbjct: 775 VARMGLGFGSNSMAT-APTA---STVSVSAG---GPAPSQSNSFKAPANSDSSAAGGNSG 827

Query: 643 FNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
           FNQ+  DL QNLHLQDDI  DIA+EFTENGFFN+DLDD MG+G  A
Sbjct: 828 FNQKVPDLPQNLHLQDDIVSDIAHEFTENGFFNSDLDDNMGYGWKA 873

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490401|ref|XP_002279763.2| PREDICTED: uncharacterized protein LOC100265879 [Vitis vinifera]

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/700 (75%), Positives = 595/700 (85%), Gaps = 22/700 (3%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           M  RVP SF+Q+PNN SQV KK RLDIKQEDI  QQ++QQ+LQRQDP+QLQG NPQ Q+L
Sbjct: 175 MNPRVPASFIQEPNNPSQVHKKARLDIKQEDILPQQIVQQILQRQDPMQLQGHNPQFQSL 234

Query: 61  LQQQQRLRQQQILQSMPPLQ-RAQLQQQQQQQMQMRQQMQQQQQ--GMQSANATKRPYDS 117
           +QQQ+  +QQQ+LQSMP    RA LQQQ QQQ Q + Q++   Q  GMQ  +A KRPYDS
Sbjct: 235 IQQQRLRQQQQMLQSMPQQMQRAHLQQQHQQQQQQQLQLRHHLQQQGMQPISAMKRPYDS 294

Query: 118 GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQ 177
           GVCARRLMQYLYHQRQ  PD TIAYWRKFVAEYYSPRAKKRWCLSLYDNVG+HALGVFPQ
Sbjct: 295 GVCARRLMQYLYHQRQ--PDKTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGNHALGVFPQ 352

Query: 178 AAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMML 237
           AAMDAW C+IC SKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLDLPRECRF SGIMML
Sbjct: 353 AAMDAWHCEICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFSSGIMML 412

Query: 238 EYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQ 297
           EYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCA+ HEELLPRRLVAPQVNQL+Q
Sbjct: 413 EYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCAQHHEELLPRRLVAPQVNQLVQ 472

Query: 298 VAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQI 357
           VAQKCQSTI+ESGS+GISQQDLQTNSNMVLTAGRQLA+SLE QSLNDLGFSKRYVRCLQI
Sbjct: 473 VAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLARSLESQSLNDLGFSKRYVRCLQI 532

Query: 358 SEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNT 417
           SEVV+SMKDLI+FC E KVGPI+GLKS+PRHA+A KL+MQKMQE EQLA+VQGLPTDRNT
Sbjct: 533 SEVVNSMKDLIDFCRENKVGPIDGLKSYPRHASAVKLEMQKMQEMEQLANVQGLPTDRNT 592

Query: 418 LNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQ 477
           LNKLIALHP G+N++MSNN HMV RGALSGSAQAALALTNYQNLLMRQNS+NSNP+SLQQ
Sbjct: 593 LNKLIALHP-GLNSHMSNNPHMVNRGALSGSAQAALALTNYQNLLMRQNSMNSNPSSLQQ 651

Query: 478 EASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPP-------QQPQQLQQRS 530
           E   SF++SNQSPSS+FQGPA+ I GSM NLP SGFSSPHLPP       QQ QQ QQRS
Sbjct: 652 EGPSSFNSSNQSPSSTFQGPATLISGSMHNLPGSGFSSPHLPPQQQQQQQQQQQQQQQRS 711

Query: 531 LSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNG-GVQQQSLSGQ-ANGMMVRNGL 588
           L+ ++LLQQ+   SSQ +QA+QQQMIQQ+LQEM+NN G G+QQQSLSGQ  NG M R+G+
Sbjct: 712 LNPSSLLQQNPGLSSQSSQALQQQMIQQMLQEMTNNCGPGMQQQSLSGQNVNGSMTRSGM 771

Query: 589 GFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQ 648
           GFG NS AA     ++P+ S    G + GP  S+SNSFK   NS++SA   N+GFNQ+A 
Sbjct: 772 GFGNNSAAA---TVASPNLS----GSIGGPPLSKSNSFKGPLNSDSSAGGANSGFNQKAS 824

Query: 649 DLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
           DL  NLHL D++ QDIA EF +NGFFN+DL+D M +G  A
Sbjct: 825 DLAHNLHLSDEMVQDIAREFPDNGFFNSDLEDNMSYGWKA 864

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539545|ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative [Ricinus communis] gi|223549952|gb|EEF51439.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/690 (79%), Positives = 603/690 (87%), Gaps = 15/690 (2%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           MG R  G+F+QDPNNLSQVQKKPRLDIKQEDI  QQVLQQLLQRQD +QLQ R+PQLQ L
Sbjct: 69  MGPRATGTFLQDPNNLSQVQKKPRLDIKQEDILHQQVLQQLLQRQDSMQLQSRSPQLQTL 128

Query: 61  LQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVC 120
           L QQ+  +QQQI QSMPPLQRAQLQQQQQQ    +Q  QQ  Q    A+A KRPYD G+C
Sbjct: 129 LHQQRLRQQQQIFQSMPPLQRAQLQQQQQQMQLRQQMQQQAMQ---PASAIKRPYDGGIC 185

Query: 121 ARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 180
           ARRLMQYLYHQRQRP +N+IAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM
Sbjct: 186 ARRLMQYLYHQRQRPAENSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 245

Query: 181 DAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYG 240
           +AWQCDICGSKSGRGFEATFEVLPRL+EIKFGSGVIDEL+FLDLPRECRFPSGIMMLEYG
Sbjct: 246 EAWQCDICGSKSGRGFEATFEVLPRLDEIKFGSGVIDELLFLDLPRECRFPSGIMMLEYG 305

Query: 241 KAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQ 300
           KAVQESVYEQLR+VREGQLRIIFT+DLKILSWEFCARRHEELLPRR+VAPQVNQL+QVAQ
Sbjct: 306 KAVQESVYEQLRVVREGQLRIIFTHDLKILSWEFCARRHEELLPRRVVAPQVNQLVQVAQ 365

Query: 301 KCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEV 360
           KCQSTI+ESG++G+SQQDLQTNSNMVLTAGRQLAK+LELQSLNDLGFSKRYVRCLQISEV
Sbjct: 366 KCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKTLELQSLNDLGFSKRYVRCLQISEV 425

Query: 361 VSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNK 420
           V+SMKDLI+FC EQ VGPIEGLKS+PRH + AKLQMQKMQE EQLA+VQGLPTDRNTLNK
Sbjct: 426 VNSMKDLIDFCREQNVGPIEGLKSYPRHTSVAKLQMQKMQEMEQLANVQGLPTDRNTLNK 485

Query: 421 LIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEAS 480
           L+ALHP G+NN+MSNN+HM  RGALSGSAQAALALTNYQNLLMRQNS+ SN +SLQQEA+
Sbjct: 486 LMALHP-GINNHMSNNHHMANRGALSGSAQAALALTNYQNLLMRQNSMTSNSSSLQQEAA 544

Query: 481 PSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQS 540
            SF+NSNQ+PSS+FQGP +F+ GS+QNLPVSGFSSP +     Q  QQRSLS N LLQQ+
Sbjct: 545 SSFNNSNQNPSSNFQGPGAFVAGSLQNLPVSGFSSPQI--PPQQPQQQRSLSSNGLLQQN 602

Query: 541 HPQSSQGNQAMQQQMIQQLLQEMSNNN-GGVQQQSLSGQA-NGMMVRNGLGFGGNSPAAG 598
           HPQSS  NQA QQQMIQQLLQEMSNN+ GGVQQ SLSGQ  NG M RNG+GF  NS  A 
Sbjct: 603 HPQSSPSNQASQQQMIQQLLQEMSNNSGGGVQQHSLSGQNQNGNMARNGVGFRSNSSDA- 661

Query: 599 APPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQD 658
             P  AP+ S    G VAGP  SRSNSFKAA+NS++SA  GN+ FNQ+ Q+L  NLHLQD
Sbjct: 662 --PTPAPTVS----GSVAGPAPSRSNSFKAASNSDSSAAGGNSNFNQKVQELPHNLHLQD 715

Query: 659 DIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
           DI  DIA+EFTENGFFN+DLDD MG+G  A
Sbjct: 716 DIVPDIAHEFTENGFFNSDLDDNMGYGWKA 745

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559867|ref|XP_003548218.1| PREDICTED: uncharacterized protein LOC100816886 [Glycine max]

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/703 (74%), Positives = 587/703 (83%), Gaps = 27/703 (3%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           MG++VPGSF+QDPNN+S + KKPR+DIKQED+ QQQV+QQ+LQRQD +Q QGRNPQLQAL
Sbjct: 179 MGAQVPGSFIQDPNNMSHLSKKPRMDIKQEDVMQQQVIQQILQRQDSMQFQGRNPQLQAL 238

Query: 61  LQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQS-------ANATKR 113
           LQQQQRLRQQQI QSMP LQRA LQQQQQQQ Q + Q QQ Q   Q        ++A KR
Sbjct: 239 LQQQQRLRQQQIFQSMPQLQRAHLQQQQQQQQQQQHQQQQMQLRQQLQQQVMQPSSAGKR 298

Query: 114 PYDSGV---CARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHH 170
           PYDSGV   CARRLMQYLYHQRQRP DN+IAYWRKFVAEYYSPRAKKRWCLSLY NVGHH
Sbjct: 299 PYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHH 358

Query: 171 ALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRF 230
           ALGVFPQAAMDAWQCD+CGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+FLDLPRE RF
Sbjct: 359 ALGVFPQAAMDAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRF 418

Query: 231 PSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAP 290
           PSG+MMLEY KA+QESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLPRRLVAP
Sbjct: 419 PSGVMMLEYAKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAP 478

Query: 291 QVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKR 350
           QVNQL+QVAQKCQSTI+ESG++G+SQQDLQTNSNMVLTAGRQLAK LELQSLNDLGFSKR
Sbjct: 479 QVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKR 538

Query: 351 YVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQG 410
           YVRCLQISEVV+SMKDLI+ C E K+G IE LK++PR ATA+K QMQKMQE EQLA+VQG
Sbjct: 539 YVRCLQISEVVNSMKDLIDICSEHKIGAIESLKNYPRLATASKGQMQKMQEMEQLANVQG 598

Query: 411 LPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS 470
           LPTDRNTLNKL+ L+P G+NN+M+N  +MVGRGALSGSAQAALAL NYQNLLMRQNS+NS
Sbjct: 599 LPTDRNTLNKLMTLNP-GLNNHMNNTNNMVGRGALSGSAQAALALNNYQNLLMRQNSMNS 657

Query: 471 NPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGFSSPHLPP--QQPQQLQ 527
           +P SLQ+E S SF+NSN SPSS+ QG   + IPGSMQN PV GF SPHL P  QQ Q LQ
Sbjct: 658 SPGSLQREGS-SFNNSNPSPSSALQGTGPALIPGSMQNSPVGGFPSPHLTPQQQQQQLLQ 716

Query: 528 QRSLSGNNLLQQSHPQSS-QGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQ-ANGMMVR 585
           QR+LS N LLQQ+H Q S       QQQMIQQLLQEMSNNNGG+Q QSL G  ANG + +
Sbjct: 717 QRTLSANGLLQQNHSQGSQGNQALQQQQMIQQLLQEMSNNNGGLQSQSLGGHNANGNISK 776

Query: 586 NGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQ 645
           N +GFGG++P+     A+ P  +            SR+NSFK A+NS++SA  GNNGFNQ
Sbjct: 777 NTMGFGGHTPSLSGGSANVPGNNR---------PISRNNSFKTASNSDSSAAGGNNGFNQ 827

Query: 646 RAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
           R  D+QQNLHLQ D+ QDI NEF +N FFN+DLDD MG+   A
Sbjct: 828 RTSDMQQNLHLQ-DVAQDIGNEFLDNPFFNSDLDDNMGFSWKA 869

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451755|ref|XP_004143626.1| PREDICTED: uncharacterized protein LOC101207744 [Cucumis sativus]

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/699 (68%), Positives = 553/699 (79%), Gaps = 31/699 (4%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNP---QL 57
           MG+RV GS M DPN+ SQ QKKPRLDIKQ+D  QQQVLQQLLQRQD +QLQGRN    Q 
Sbjct: 174 MGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQVLQQLLQRQDSMQLQGRNTPQLQA 233

Query: 58  QALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDS 117
               QQQ+  +QQQI QS+PPLQRA +QQQQQ Q++ + Q Q  Q      NA KRP+D 
Sbjct: 234 ALFQQQQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQAIQ----PVNAMKRPHDG 289

Query: 118 GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQ 177
           GVCARRLMQYLYHQRQRP DN+IAYWRKFV EYYSPRAKKRWCLSLY+NVGHHALGVFPQ
Sbjct: 290 GVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQ 349

Query: 178 AAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMML 237
           AAMDAWQCDICGSKSGRGFEA+FEVLPRLNEIKFGSGVIDEL+FLD+PRE R+ SGIMML
Sbjct: 350 AAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMML 409

Query: 238 EYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQ 297
           EYGKAVQESVYEQLR+VREGQLRIIFT++LKIL+WEFCARRHEELLPRRLVAPQVNQL+Q
Sbjct: 410 EYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQ 469

Query: 298 VAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQI 357
           VAQKCQSTI+E G++G SQQDLQ NSNMVLTAG+QLAKSLELQSLNDLGFSKRYVRCLQI
Sbjct: 470 VAQKCQSTIAEGGTDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQI 529

Query: 358 SEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNT 417
           SEVV+SMKDLI+FC EQK GP+EGLKS+P+HAT AKLQMQKMQE EQ+A+ QGLPTDR+T
Sbjct: 530 SEVVNSMKDLIDFCREQKTGPVEGLKSYPQHAT-AKLQMQKMQEIEQVANAQGLPTDRST 588

Query: 418 LNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS-NPNSLQ 476
           L ++++LHP G+NN M++   +  RG LSGSAQAALAL+NYQNLLMRQNS+NS + ++LQ
Sbjct: 589 LGRMVSLHP-GLNNQMNSQNQLASRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQ 647

Query: 477 QEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSL--SGN 534
           QE S SF+ +NQSPSSSF G  +     MQNLP SG SSP+LP QQ Q   Q     + N
Sbjct: 648 QETSSSFNTTNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTN 707

Query: 535 NLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGG--------VQQQSLSGQANGMMVRN 586
           NLL  S   ++  NQAMQ QMIQQLLQ +SNN+GG         QQQ LSG    + V  
Sbjct: 708 NLLMHSTQGNTNNNQAMQHQMIQQLLQ-ISNNSGGGQPQQQPQPQQQPLSGSNTKVSVAG 766

Query: 587 GL-GFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG--NNGF 643
              G+G ++ +  A   +  S SN        P  SRSNSFK+A+  + SA      +GF
Sbjct: 767 TYTGYGASNSSVTAAGTANASCSNT-------PAPSRSNSFKSASTGDVSAAGARSGSGF 819

Query: 644 NQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTM 682
           NQR+ DL QNL L DDI QDIA++FT+NGFFNNDLDD M
Sbjct: 820 NQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNM 858

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559869|ref|XP_003548219.1| PREDICTED: uncharacterized protein LOC547529 [Glycine max]

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/589 (74%), Positives = 495/589 (84%), Gaps = 18/589 (3%)

Query: 105 MQSANATKRPYDS---GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCL 161
           MQ ++  KRPYDS   GVCARRLMQYLYHQRQRP DN+IAYWRKFVAEYYSPRAKKRWCL
Sbjct: 304 MQPSSVVKRPYDSSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCL 363

Query: 162 SLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMF 221
           SLY NVGHHALGVFPQA+MDAW CDICGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+F
Sbjct: 364 SLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLF 423

Query: 222 LDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEE 281
           LD+PRE RF SG MMLEYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCAR HEE
Sbjct: 424 LDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARCHEE 483

Query: 282 LLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQS 341
           LLPRRLVAPQVNQL+QVA+KCQSTI+ESGS+G+SQQD+QTNSNM+LTAG QLAK LE+QS
Sbjct: 484 LLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNSNMLLTAGGQLAKILEMQS 543

Query: 342 LNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQE 401
           LN+LGFSKRYVRCLQISEVV+SMKDLI+ C + K+G IE LK+FPR ATA+K+QMQKMQE
Sbjct: 544 LNELGFSKRYVRCLQISEVVNSMKDLIDICADHKIGAIESLKNFPRLATASKVQMQKMQE 603

Query: 402 AEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNL 461
            EQLA+VQGLPTDRNTLNKL+AL+P G+NN+++N ++MV RGALSGSAQAALAL NYQNL
Sbjct: 604 MEQLANVQGLPTDRNTLNKLMALNP-GLNNHINNPHNMVNRGALSGSAQAALALNNYQNL 662

Query: 462 LMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGFSSPH-LP 519
           LMRQNS+NS+P SLQ+E S SF+NSNQSPSS+ QG   + IPG MQN  VSGF SP   P
Sbjct: 663 LMRQNSMNSSPGSLQREGS-SFNNSNQSPSSALQGAGPALIPGPMQNSSVSGFPSPRLPP 721

Query: 520 PQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQA 579
            QQ   LQQ SLS N LLQQ+H Q SQGNQA+QQQMI QLLQEMSNNNGGVQ QSL G +
Sbjct: 722 QQQQHHLQQPSLSANALLQQNHSQGSQGNQALQQQMIHQLLQEMSNNNGGVQPQSLGGPS 781

Query: 580 NGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG 639
              M +N LGFGG+ P+          ++NV+G    GP  SR+NSFK   NS++SA  G
Sbjct: 782 -ANMAKNALGFGGHYPSLSG------GSANVTGNN--GP-MSRNNSFKTTANSDSSAAGG 831

Query: 640 NNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
           NNG NQR  ++ QNLHLQ D+ QDI NEFT+N F N+DLDD MG+G  A
Sbjct: 832 NNGLNQRTSEMPQNLHLQ-DVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 879

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522406|ref|XP_004168217.1| PREDICTED: uncharacterized protein LOC101230748 [Cucumis sativus]

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/688 (69%), Positives = 545/688 (79%), Gaps = 34/688 (4%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNP---QL 57
           MG+RV GS M DPN+ SQ QKKPRLDIKQ+D  QQQVLQQLLQRQD +QLQGRN    Q 
Sbjct: 174 MGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQVLQQLLQRQDSMQLQGRNTPQLQA 233

Query: 58  QALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDS 117
               QQQ+  +QQQI QS+PPLQRA +QQQQQ Q++ + Q Q  Q      NA KRP+D 
Sbjct: 234 ALFQQQQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQAIQ----PVNAMKRPHDG 289

Query: 118 GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQ 177
           GVCARRLMQYLYHQRQRP DN+IAYWRKFV EYYSPRAKKRWCLSLY+NVGHHALGVFPQ
Sbjct: 290 GVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQ 349

Query: 178 AAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMML 237
           AAMDAWQCDICGSKSGRGFEA+FEVLPRLNEIKFGSGVIDEL+FLD+PRE R+ SGIMML
Sbjct: 350 AAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMML 409

Query: 238 EYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQ 297
           EYGKAVQESVYEQLR+VREGQLRIIFT++LKIL+WEFCARRHEELLPRRLVAPQVNQL+Q
Sbjct: 410 EYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQ 469

Query: 298 VAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQI 357
           VAQKCQSTI+E G++G SQQDLQ NSNMVLTAG+QLAKSLELQSLNDLGFSKRYVRCLQI
Sbjct: 470 VAQKCQSTIAEGGTDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQI 529

Query: 358 SEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNT 417
           SEVV+SMKDLI+FC EQK GP+EGLKS+P+HAT AKLQMQKMQE EQ+A+ QGLPTDR+T
Sbjct: 530 SEVVNSMKDLIDFCREQKTGPVEGLKSYPQHAT-AKLQMQKMQEIEQVANAQGLPTDRST 588

Query: 418 LNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS-NPNSLQ 476
           L ++++LHP G+NN M++   +  RG LSGSAQAALAL+NYQNLLMRQNS+NS + ++LQ
Sbjct: 589 LGRMVSLHP-GLNNQMNSQNQLASRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQ 647

Query: 477 QEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSL--SGN 534
           QE S SF+ +NQSPSSSF G  +     MQNLP SG SSP+LP QQ Q   Q     + N
Sbjct: 648 QETSSSFNTTNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTN 707

Query: 535 NLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNS 594
           NLL  S   ++  NQAMQ QMIQQLLQ +SNN+G        G  N    RN      NS
Sbjct: 708 NLLMHSTQGNTNNNQAMQHQMIQQLLQ-ISNNSG-------EGNRNSNHNRN----TSNS 755

Query: 595 PAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG--NNGFNQRAQDLQQ 652
               A  A+A S SN        P  SRSNSFK+A+  + SA      +GFNQR+ DL Q
Sbjct: 756 SVTAAGTANA-SCSNT-------PAPSRSNSFKSASTGDVSAAGARSGSGFNQRSADLPQ 807

Query: 653 NLHLQDDIDQDIANEFTENGFFNNDLDD 680
           NL L DDI QDIA++FT+NGFFNNDLDD
Sbjct: 808 NLQLDDDIIQDIAHDFTDNGFFNNDLDD 835

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530901|ref|XP_003534017.1| PREDICTED: uncharacterized protein LOC100789452 [Glycine max]

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/701 (70%), Positives = 562/701 (80%), Gaps = 31/701 (4%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           MG++VPGSF+QDPNN+S + KK RLD KQED+ QQQV+QQLLQRQD +Q QGRNPQLQA 
Sbjct: 176 MGAQVPGSFIQDPNNMSHLSKKNRLDTKQEDMTQQQVIQQLLQRQDSMQFQGRNPQLQAF 235

Query: 61  LQQQQRLRQQQILQSMPPL----QRAQLQQQQQQQMQMRQQMQQQQQGMQS----ANATK 112
           LQQQQ+ +Q+   Q M        RA LQQQQQQQ QM+ + QQQQQ  Q     ++A K
Sbjct: 236 LQQQQQQQQRLRQQQMFQQMPQLHRAHLQQQQQQQQQMQLRQQQQQQQQQQVMQPSSAVK 295

Query: 113 RPYDS---GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGH 169
           RPY+S   GVCARRLMQYLYHQRQRP DN+IAYWRKFVAEYYS RAKKRWCLSLY NVGH
Sbjct: 296 RPYESSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSLYSNVGH 355

Query: 170 HALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECR 229
           HALGVFPQA+MDAW CDICGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+FLD+PRE R
Sbjct: 356 HALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREMR 415

Query: 230 FPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVA 289
           F SG MMLEYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLPRRLVA
Sbjct: 416 FASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVA 475

Query: 290 PQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSK 349
           PQVNQL+QVA+KCQSTI+ESGS+G+SQQD+QTN NM+LTAG QLAK LE+QSLN+LGFSK
Sbjct: 476 PQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNGNMLLTAGGQLAKILEMQSLNELGFSK 535

Query: 350 RYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQ 409
           RYVRCLQISEVV+SMKDLI+ C E K+G IE LK++PR ATA+K QMQKMQE EQL +VQ
Sbjct: 536 RYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKHQMQKMQEMEQLGNVQ 595

Query: 410 GLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSIN 469
            LPTD+NTLNKL+AL+P G+NN+++N+++MV RGALSGSAQAALAL NYQNLLMRQNS N
Sbjct: 596 CLPTDQNTLNKLMALNP-GLNNHINNSHNMVNRGALSGSAQAALALNNYQNLLMRQNSTN 654

Query: 470 SNPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGF-SSPHLPPQQPQQLQ 527
           S+P SLQ+E S SF+NSNQSPSS+ QG + + I GSMQN  VSGF S    P QQ   LQ
Sbjct: 655 SSPGSLQREGS-SFNNSNQSPSSALQGASPALISGSMQNSSVSGFPSPHLPPQQQQHHLQ 713

Query: 528 QRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNG 587
           QRSLS N LLQQ+H  S       QQQMI QLLQEMSNNNGG+Q  SL G       +N 
Sbjct: 714 QRSLSSNALLQQNHHGSQGNQALQQQQMIHQLLQEMSNNNGGMQPLSLGGPN----AKNA 769

Query: 588 LGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRA 647
           +GFGG++P+     A+ P        G  GP  SR NSFK A+NS++SA  GNN FNQR 
Sbjct: 770 MGFGGHTPSLSGGSANVP--------GNNGP-MSRINSFKTASNSDSSAVGGNNRFNQRT 820

Query: 648 QDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 688
            D+ Q  HLQ ++ QDI NEFT+N F N+DLDD MG+G  A
Sbjct: 821 SDMPQ--HLQ-NVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 858

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741103|emb|CBI31834.3| unnamed protein product [Vitis vinifera]

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/514 (79%), Positives = 447/514 (86%), Gaps = 26/514 (5%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           M  RVP SF+Q+PNN SQV KK RLDIKQEDI  QQ++QQ+LQRQDP+QLQG NPQ Q+L
Sbjct: 104 MNPRVPASFIQEPNNPSQVHKKARLDIKQEDILPQQIVQQILQRQDPMQLQGHNPQFQSL 163

Query: 61  LQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVC 120
           +QQQ+                        +Q Q   Q   QQQGMQ  +A KRPYDSGVC
Sbjct: 164 IQQQR-----------------------LRQQQQMLQHHLQQQGMQPISAMKRPYDSGVC 200

Query: 121 ARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 180
           ARRLMQYLYHQRQ  PD TIAYWRKFVAEYYSPRAKKRWCLSLYDNVG+HALGVFPQAAM
Sbjct: 201 ARRLMQYLYHQRQ--PDKTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGNHALGVFPQAAM 258

Query: 181 DAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYG 240
           DAW C+IC SKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLDLPRECRF SGIMMLEYG
Sbjct: 259 DAWHCEICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFSSGIMMLEYG 318

Query: 241 KAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQ 300
           KAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCA+ HEELLPRRLVAPQVNQL+QVAQ
Sbjct: 319 KAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCAQHHEELLPRRLVAPQVNQLVQVAQ 378

Query: 301 KCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEV 360
           KCQSTI+ESGS+GISQQDLQTNSNMVLTAGRQLA+SLE QSLNDLGFSKRYVRCLQISEV
Sbjct: 379 KCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLARSLESQSLNDLGFSKRYVRCLQISEV 438

Query: 361 VSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNK 420
           V+SMKDLI+FC E KVGPI+GLKS+PRHA+A KL+MQKMQE EQLA+VQGLPTDRNTLNK
Sbjct: 439 VNSMKDLIDFCRENKVGPIDGLKSYPRHASAVKLEMQKMQEMEQLANVQGLPTDRNTLNK 498

Query: 421 LIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEAS 480
           LIALHP G+N++MSNN HMV RGALSGSAQAALALTNYQNLLMRQNS+NSNP+SLQQE  
Sbjct: 499 LIALHP-GLNSHMSNNPHMVNRGALSGSAQAALALTNYQNLLMRQNSMNSNPSSLQQEGP 557

Query: 481 PSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFS 514
            SF++SNQSPSS+FQGPA+ I GSM NLP SGFS
Sbjct: 558 SSFNSSNQSPSSTFQGPATLISGSMHNLPGSGFS 591

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446059|ref|XP_004140789.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101219560 [Cucumis sativus]

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/694 (67%), Positives = 551/694 (79%), Gaps = 35/694 (5%)

Query: 1   MGSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQAL 60
           MG++  GSF+ DPN+ SQVQKKPRLD+K ED+ QQQVLQQL QRQD   +Q RN QLQAL
Sbjct: 114 MGTKHQGSFIPDPNSYSQVQKKPRLDLKPEDVLQQQVLQQLFQRQD--SMQSRNSQLQAL 171

Query: 61  LQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRP-YDSG- 118
            QQQ+  +QQQILQS+P     Q + Q QQQ Q++ + Q QQQ MQ  +  KRP YD+G 
Sbjct: 172 FQQQRMRQQQQILQSLP-----QYRAQFQQQQQIQLRQQMQQQAMQPVSPIKRPPYDAGG 226

Query: 119 VCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQA 178
           VCARRLMQYLYHQRQRPP+N+IAYWRKFVAEYYSPRAKKRWCLSLY+NVGHHALGVFPQA
Sbjct: 227 VCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQA 286

Query: 179 AMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLE 238
           AMDAWQCDICGSKSGRGFEATFEVLPRL+EIKFGSGVIDEL+FLDLP+E RF SGIMMLE
Sbjct: 287 AMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFASGIMMLE 346

Query: 239 YGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQV 298
           YGKA+QESVYEQLR++REGQLRI+FT DLKIL WEFCARRHEELLPRRLVAPQVNQL+QV
Sbjct: 347 YGKAIQESVYEQLRVIREGQLRIVFTQDLKILCWEFCARRHEELLPRRLVAPQVNQLVQV 406

Query: 299 AQKCQSTISESGSEGISQQDLQTNSNMVLT---AGRQLAKSLELQSLNDLGFSKRYVRCL 355
           AQKCQSTI+ESG +G+SQ+DLQTNSNM+ T   AGR L        LNDLGFSKRYVRCL
Sbjct: 407 AQKCQSTIAESGPDGVSQKDLQTNSNMLPTQCAAGRVLTX-----LLNDLGFSKRYVRCL 461

Query: 356 QISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDR 415
           QISEVV+SMKDLI FC +QKVGPIEGLK++PRHATAAKLQMQKMQE EQL S+QGLPTDR
Sbjct: 462 QISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLVSIQGLPTDR 521

Query: 416 NTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSL 475
           NT+NKL+ LHP  ++N+  NN+ M+GRG  SGSAQAALA+T YQN+LMRQNS+NSNP+  
Sbjct: 522 NTINKLMTLHP-ELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPH 580

Query: 476 QQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQ--LQQRSLSG 533
           QQEAS SF+ SN +PS + QG  S IPGS+Q   V G+     P Q+  Q  LQQ   + 
Sbjct: 581 QQEASSSFNTSNYNPSPTLQGSTSLIPGSVQTSSVGGYPGSQQPLQKQSQPPLQQHPPNT 640

Query: 534 NNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNN--NGGVQQQSLSG-QANGMMVRNGLGF 590
             L+QQ+HPQ  QG+QA+QQQM  Q L +MSNN  +G +QQQ L+G  AN  + R G+ +
Sbjct: 641 GTLVQQNHPQMMQGSQALQQQM-IQQLLQMSNNSKSGSLQQQPLTGPNANRSIPRRGMAY 699

Query: 591 GGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDL 650
            GN+      PA    + N+SG  V GP  SRSNSFKAA+NSE+S  AGN+GF+Q+A DL
Sbjct: 700 VGNTSV----PAGV--SGNLSGSNVPGP--SRSNSFKAASNSESS--AGNSGFDQKASDL 749

Query: 651 QQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGW 684
            Q LH  + + +DI  +F E+GF NN+LD+ +G+
Sbjct: 750 PQ-LHFPESLVEDIGQDFPESGFINNELDEHLGY 782

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	693
TAIR|locus:2174028	816	SLK2 "AT5G62090" [Arabidopsis	0.646	0.549	0.586	4.9e-148
TAIR|locus:2131804	748	SLK1 "SEUSS-like 1" [Arabidops	0.471	0.437	0.664	7.2e-137
TAIR|locus:504955415	685	SLK3 "SEUSS-like 3" [Arabidops	0.525	0.531	0.638	2.4e-134
TAIR|locus:2029137	877	SEU "seuss" [Arabidopsis thali	0.422	0.334	0.556	8e-89
POMBASE|SPBC30B4.03c	391	adn1 "adhesion defective prote	0.344	0.611	0.249	3.5e-06

TAIR|locus:2174028 SLK2 "AT5G62090" [Arabidopsis thaliana (taxid:3702)]

 Score = 1325 (471.5 bits), Expect = 4.9e-148, Sum P(3) = 4.9e-148
 Identities = 279/476 (58%), Positives = 323/476 (67%)

Query:   113 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 172
             RPY++ VCARRLMQYLYHQRQRP +++I YWRKFV EY+SPRAKKRWCLS YDNVGH AL
Sbjct:   285 RPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFSPRAKKRWCLSHYDNVGHSAL 344

Query:   173 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 232
             GV PQAA D WQCD+CGSKSGRGFEATF+VLPRLNEIKF SGV+DEL++L +P E R+ S
Sbjct:   345 GVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFASGVLDELLYLGVPSERRYGS 404

Query:   233 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 292
             GIM+LEYGKAVQESVYE +R+VREG LRIIF+ +LKILSWEFC RRHEELLPRRLVAPQV
Sbjct:   405 GIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHEELLPRRLVAPQV 464

Query:   293 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 352
             NQLLQVA+KCQST            DLQ NSNMV+ AGRQLAKSLE  SLNDLGFSKRYV
Sbjct:   465 NQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQLAKSLESHSLNDLGFSKRYV 524

Query:   353 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLP 412
             RCLQISEVVSSMKD+I+FC +QKVGPIE LKS+P    A K QMQ+M   EQLA+ +GLP
Sbjct:   525 RCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKAGKPQMQEM---EQLAAARGLP 581

Query:   413 TDRNTLNKLIALHPGGMN---NNMSNNYHMVGRXXXXXXXXXXXXXTNYQNLLMRQNSIN 469
              DRN+LNKL+AL   G+N   NNMS    + G              TNYQ++LM+QN +N
Sbjct:   582 PDRNSLNKLMALRNSGINIPMNNMSGQGSLPG-----SAQAAAFALTNYQSMLMKQNHLN 636

Query:   470 SNPNS--LQQEAXXXXXXXXXXXXXXXXGPASFIPGSMQNLPVSGFXXXXXXXXXXXXXX 527
             S+ N+  +QQE                 G +  +PG + +  +SG               
Sbjct:   637 SDLNNTTIQQEPSRNRSASPSYQ-----GTSPLLPGFVHSPSISGVSSHLSPQRQMPSSS 691

Query:   528 XXXXXGNNLLQQSH---PXXXXXXXXXXXXXXXXXXXXXXNNNGGV--QQQSLSGQ 578
                   N   QQ H   P                      N+NGG   QQQSLSGQ
Sbjct:   692 Y-----NGSTQQYHQQPPSCSSGNQTLEQQMIHQIWQQMANSNGGSGQQQQSLSGQ 742

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:2131804 SLK1 "SEUSS-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1139 (406.0 bits), Expect = 7.2e-137, Sum P(4) = 7.2e-137
 Identities = 222/334 (66%), Positives = 259/334 (77%)

Query:   113 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 172
             RPY+ GVCAR+LM YLYH +QRP +N I YWRKFVAEY+SPRAK+R CLS Y++ GHHAL
Sbjct:   182 RPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESAGHHAL 241

Query:   173 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 232
             G+FPQAA D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDEL++LD PRE RFP+
Sbjct:   242 GMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPRENRFPN 301

Query:   233 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 292
             G+MMLEY KAVQE+V+EQ R+VREG LRIIF+ DLKILSWEFCARRHEELL RRL+APQV
Sbjct:   302 GLMMLEYRKAVQETVHEQFRVVREGHLRIIFSQDLKILSWEFCARRHEELLLRRLIAPQV 361

Query:   293 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 352
             NQLLQVAQKCQST            DLQ+NSNMVL AGRQLAK +ELQSLNDLG+ KRY+
Sbjct:   362 NQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYI 421

Query:   353 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLP 412
             R LQISEVV SMKDL+NF  EQK+GPIEGLK         KLQ QKMQE EQ  +   + 
Sbjct:   422 RTLQISEVVKSMKDLMNFTGEQKIGPIEGLKRLLEQTVTVKLQKQKMQEMEQFGNNGAI- 480

Query:   413 TDRNTLNKLIALHPGGMN----NNMSNNYHMVGR 442
                  +   + L  G MN    NN +N++ +VGR
Sbjct:   481 --NGPVQAQMVLTSGTMNGSTGNNTNNHHQIVGR 512

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:504955415 SLK3 "SEUSS-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1198 (426.8 bits), Expect = 2.4e-134, Sum P(4) = 2.4e-134
 Identities = 237/371 (63%), Positives = 280/371 (75%)

Query:   113 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 172
             RPY+ GVCAR+LM YLYH +QRP +N I YWRKFVAEY+SPRAK+R CLS Y++VGHHAL
Sbjct:   154 RPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESVGHHAL 213

Query:   173 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 232
             G+FPQAA D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDEL++LD PRE RFP+
Sbjct:   214 GMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPRENRFPN 273

Query:   233 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 292
             G+MMLEY KAVQE+V+EQ R+VREG LRIIF+ DLKILSWEFCARRHEELL RRL+APQV
Sbjct:   274 GLMMLEYRKAVQETVHEQFRVVREGHLRIIFSPDLKILSWEFCARRHEELLLRRLIAPQV 333

Query:   293 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 352
             NQLLQVAQKCQST            D+Q+NSNMVL AGRQLAK +ELQSLNDLG+ KRY+
Sbjct:   334 NQLLQVAQKCQSTISESGSQGVSQQDIQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYI 393

Query:   353 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLAS---VQ 409
             R LQISEVV SMKDL+NF  E KVGP+EGLK         KLQ QKMQE EQ  +   + 
Sbjct:   394 RTLQISEVVKSMKDLMNFTGEHKVGPLEGLKQLLEQTATVKLQRQKMQEMEQFGNSGAMS 453

Query:   410 GLPTDRNTLNKLIALHPGGMNNNMSNNYH-MVGRXXXXXXXXXXXXXTNYQNLLMRQNSI 468
             G    + TL+       G   NN SNN+H +VGR             TNYQ++L+RQN++
Sbjct:   454 GPAQAQMTLSS--GTMSGSTANNNSNNHHQIVGRGAMNGSPQATAALTNYQSMLIRQNAM 511

Query:   469 NS-NPNSLQQE 478
             N+ N N+  QE
Sbjct:   512 NNQNSNTGNQE 522

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2029137 SEU "seuss" [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
 Identities = 167/300 (55%), Positives = 214/300 (71%)

Query:   112 KRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHA 171
             K  Y+ G+ A+RL QY+Y Q+ RP DN I +WRKFVAEY++P AKKRWC+S+Y + G   
Sbjct:   298 KPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQT 356

Query:   172 LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFP 231
              GVFPQ   D W C+IC  K GRGFEAT EVLPRL +IK+ SG ++EL+++D+PRE +  
Sbjct:   357 TGVFPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNS 413

Query:   232 SGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQ 291
             SG ++LEY KA QESV+E LR+VR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQ
Sbjct:   414 SGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQ 473

Query:   292 VNQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRY 351
             V+QL   AQK Q              +LQ N NM + + RQLAK+LE+  +NDLG++KRY
Sbjct:   474 VSQLGSAAQKYQQAAQNATTDSALP-ELQNNCNMFVASARQLAKALEVPLVNDLGYTKRY 532

Query:   352 VRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHA--TAAKLQMQKMQEAEQLASVQ 409
             VRCLQISEVV+SMKDLI++  E + GPIE L  FPR    ++A       Q ++QL   Q
Sbjct:   533 VRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRTGPSSALPGPSPQQASDQLRQQQ 592

GO:0005634 "nucleus" evidence=ISM

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0060090 "binding, bridging" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0003677 "DNA binding" evidence=IDA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

POMBASE|SPBC30B4.03c adn1 "adhesion defective protein, predicted transcriptional regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 65/261 (24%), Positives = 114/261 (43%)

Query:   151 YSPRAKKRWCLSLYDNVGHHALGV---FPQAAMDAWQCDICGS--KSGRGFEATFEVLPR 205
             Y+ +    W  ++ D++G+    V   + +     +  D   S  +  + FE ++  LPR
Sbjct:    27 YNEQLMSGWESTMKDDIGYWRRFVHDFYTEKGTFRYNIDYKDSPNQEPKLFELSYAALPR 86

Query:   206 LNEIKFGSGVIDELMFL-DLPRECRFPSGIMMLEYGKAVQESVYEQ-LRIVREGQLRIIF 263
                + +  G + ++ FL    +E   P+    +E  +A     Y+  ++++  G LR  F
Sbjct:    87 FLYLSY-CGKLKKMSFLLGNTKEFAIPNNGYFVESSRASILYQYQGGVQVIVSGHLRAHF 145

Query:   264 TND--LKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTXXXXXXXXXXXXDLQT 321
                  LK+ S EF A  H E L R L+    N  L ++Q  +              D  +
Sbjct:   146 FRAPLLKLDSLEFSAVGHSEYLLRELMT---NASLALSQS-RPPQNQIQHDGVKSEDPSS 201

Query:   322 NSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEG 381
              S  + ++   L  S     +N+ G     +R ++I+E +S M+DLI F   Q+ GP   
Sbjct:   202 ESVNINSSSSLLPDS----PVNEYGLEPHIMRFMEITETISGMRDLIAFTLAQRSGPTSA 257

Query:   382 LKSFPRHATAAKLQMQKMQEA 402
             L  F   ATA + Q Q MQ++
Sbjct:   258 LHKF---ATALQQQHQ-MQKS 274


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      693       511   0.00087  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  297 KB (2154 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.46u 0.13s 37.59t   Elapsed:  00:00:02
  Total cpu time:  37.46u 0.13s 37.59t   Elapsed:  00:00:02
  Start:  Tue May 21 05:15:26 2013   End:  Tue May 21 05:15:28 2013

GO:0003712 "transcription cofactor activity" evidence=ISM

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISM

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IMP

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	693
pfam01803	230	pfam01803, LIM_bind, LIM-domain binding protein	3e-79
pfam13779	820	pfam13779, DUF4175, Domain of unknown function (DU	1e-05
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	2e-04
pfam13779	820	pfam13779, DUF4175, Domain of unknown function (DU	3e-04
pfam13779	820	pfam13779, DUF4175, Domain of unknown function (DU	3e-04
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	4e-04
pfam13779	820	pfam13779, DUF4175, Domain of unknown function (DU	8e-04
pfam13779	820	pfam13779, DUF4175, Domain of unknown function (DU	0.001
COG3064	387	COG3064, TolA, Membrane protein involved in colici	0.001
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.002
pfam09606	768	pfam09606, Med15, ARC105 or Med15 subunit of Media	0.004

>gnl|CDD|216712 pfam01803, LIM_bind, LIM-domain binding protein

 Score =  251 bits (644), Expect = 3e-79
 Identities = 81/266 (30%), Positives = 118/266 (44%), Gaps = 40/266 (15%)

Query: 122 RRLMQYLYHQRQ-RPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 180
            RL+++  H    R  D+ I+YW++FV E++SP A  R+ LS  D               
Sbjct: 2   LRLLEFNEHLSNFRGEDDDISYWQRFVHEFFSPDAVLRYSLSSEDGPEG----------- 50

Query: 181 DAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYG 240
                        + FE T   LPR     F SGV +  + LD  RE   P+G + +E  
Sbjct: 51  -------------KQFEITTPALPRYFRTIFESGVKELQLVLDGAREQVLPNGSIFVECP 97

Query: 241 KAVQESVYEQ-LRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVA 299
           KA     Y+   ++V EG LR  F  DLKI  W+FC R HEE +PR ++ P  + L    
Sbjct: 98  KASFIYWYDDGSQVVTEGTLRAHFDPDLKIEWWDFCTRSHEEYIPRSVLEPLASPL---- 153

Query: 300 QKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISE 359
                             +L  NS +    G Q   SL   ++   G  K  +R L+I+E
Sbjct: 154 ---------HTKSKQQSPELSKNSQLRQQKGPQPITSLPSSNVTRFGLPKAVMRFLEIAE 204

Query: 360 VVSSMKDLINFCWEQKV-GPIEGLKS 384
           ++S M+DL++F     +  P E LK 
Sbjct: 205 ILSPMQDLMSFSKANPILSPREALKQ 230

The LIM-domain binding protein, binds to the LIM domain pfam00412 of LIM homeodomain proteins which are transcriptional regulators of development. Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development. The Drosophila protein Chip is required for segmentation and activity of a remote wing margin enhancer. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions. Length = 230

>gnl|CDD|222374 pfam13779, DUF4175, Domain of unknown function (DUF4175)

 Score = 48.4 bits (116), Expect = 1e-05
 Identities = 16/77 (20%), Positives = 31/77 (40%)

Query: 30  EDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQ 89
           ++ F+    Q   QR +    QG+  Q Q    QQ +  Q Q         +       +
Sbjct: 605 DETFRDLQEQFNAQRGEQQGQQGQGGQGQGQPGQQGQQGQGQQQGQQGQGGQGGQGSLAE 664

Query: 90  QQMQMRQQMQQQQQGMQ 106
           +Q  +R ++ +Q+ G+ 
Sbjct: 665 RQQALRDELGRQRGGLP 681

Length = 820

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 33  FQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQQM 92
              Q  Q   ++  P Q      Q        Q     Q+ Q  PPLQ+ Q     QQ  
Sbjct: 202 GYPQPPQGHPEQVQPQQFLPAPSQ-----APAQPPLPPQLPQQPPPLQQPQFPGLSQQMP 256

Query: 93  QMRQQMQQQQQ 103
               Q  QQQQ
Sbjct: 257 PPPPQPPQQQQ 267

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|222374 pfam13779, DUF4175, Domain of unknown function (DUF4175)

 Score = 43.7 bits (104), Expect = 3e-04
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)

Query: 29  QEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQ 88
            ++ F  Q  +Q  Q+          P  Q    Q Q+  QQ   Q     Q +  ++QQ
Sbjct: 611 LQEQFNAQRGEQQGQQGQG-GQGQGQPGQQGQQGQGQQQGQQG--QGGQGGQGSLAERQQ 667

Query: 89  QQQMQMRQQMQQ-QQQGMQSANATKRPYD 116
             + ++ +Q       G ++  A +    
Sbjct: 668 ALRDELGRQRGGLPGMGGEAGEAARDALG 696

Length = 820

>gnl|CDD|222374 pfam13779, DUF4175, Domain of unknown function (DUF4175)

 Score = 43.7 bits (104), Expect = 3e-04
 Identities = 25/99 (25%), Positives = 32/99 (32%), Gaps = 23/99 (23%)

Query: 35  QQVLQQL------LQRQDPVQLQGRNPQ-----LQALLQQQQRLR-----------QQQI 72
           QQ+L+QL      LQ     Q      Q     L   L++QQ L              Q 
Sbjct: 560 QQLLEQLQQMMENLQVTQGGQGGQSEMQQAMEGLGETLREQQGLSDETFRDLQEQFNAQR 619

Query: 73  LQSMPPLQRAQLQQQQQQQMQMRQQMQQQ-QQGMQSANA 110
            +      +    Q Q  Q   + Q QQQ QQG      
Sbjct: 620 GEQQGQQGQGGQGQGQPGQQGQQGQGQQQGQQGQGGQGG 658

Length = 820

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 43.2 bits (102), Expect = 4e-04
 Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 29  QEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQ 88
           Q   F     Q   Q   P QL  + P LQ    Q   L QQ       P Q+ Q   Q 
Sbjct: 215 QPQQFLPAPSQAPAQPPLPPQLPQQPPPLQQ--PQFPGLSQQMPPPPPQPPQQQQQPPQP 272

Query: 89  QQQMQMRQQMQQQQQGMQSANATKRP 114
           Q Q   + Q        Q  NA   P
Sbjct: 273 QAQPPPQNQPTPHPGLPQGQNAPLPP 298

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|222374 pfam13779, DUF4175, Domain of unknown function (DUF4175)

 Score = 42.6 bits (101), Expect = 8e-04
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 31/100 (31%)

Query: 35  QQVLQQLLQRQDPVQLQGRNPQ------------LQALLQQQQRLRQQ-----------Q 71
              ++QL ++      QG  P             LQ ++ + + L +            Q
Sbjct: 506 DDYMRQLAEQAQRNPQQGDQPPDQGNSMELTQQDLQRMMDRIEELMESGRRAEAQQLLEQ 565

Query: 72  ILQSMPPLQRAQLQQQQQQQMQMRQQMQ------QQQQGM 105
           + Q M  LQ  Q  Q  Q +MQ  Q M+      ++QQG+
Sbjct: 566 LQQMMENLQVTQGGQGGQSEMQ--QAMEGLGETLREQQGL 603

Length = 820

>gnl|CDD|222374 pfam13779, DUF4175, Domain of unknown function (DUF4175)

 Score = 41.8 bits (99), Expect = 0.001
 Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 34  QQQV--LQQLLQRQDPVQLQGRN-PQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQ 90
           QQ +  L + L+ Q    L       LQ     Q+  +Q Q  Q      +   Q QQ Q
Sbjct: 587 QQAMEGLGETLREQQ--GLSDETFRDLQEQFNAQRGEQQGQQGQGGQGQGQPGQQGQQGQ 644

Query: 91  QMQMRQQMQQQQQGMQSA 108
             Q  QQ Q  Q G  S 
Sbjct: 645 GQQQGQQGQGGQGGQGSL 662

Length = 820

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 2   GSRVPGSFMQDPNNLSQVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALL 61
           G  V  + M DP   + VQ+  R+  +Q    + +  ++  + Q   +L+ +        
Sbjct: 46  GGSVIDAVMVDPG--AVVQQYGRIQSQQSSAKKGEQQRKKKEEQVAEELKPKQAA----- 98

Query: 62  QQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKR 113
            +Q+RL+Q +  + +   ++ +  ++ ++Q Q+ Q+ Q++Q    +A   K+
Sbjct: 99  -EQERLKQLEK-ERLKAQEQQKQAEEAEKQAQLEQKQQEEQARKAAAEQKKK 148

Length = 387

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 41.3 bits (97), Expect = 0.002
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 1/78 (1%)

Query: 32  IFQQQVLQQLLQRQDPVQLQG-RNPQLQALLQQQQRLRQQQILQSMPPLQRAQLQQQQQQ 90
            F QQ   +                Q Q  L    +   Q  L    P Q   LQQ Q  
Sbjct: 190 AFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQAPAQPPLPPQLPQQPPPLQQPQFP 249

Query: 91  QMQMRQQMQQQQQGMQSA 108
            +  +      Q   Q  
Sbjct: 250 GLSQQMPPPPPQPPQQQQ 267

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|220309 pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal

 Score = 40.0 bits (93), Expect = 0.004
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)

Query: 18  QVQKKPRLDIKQEDIFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQQILQSMP 77
           Q   + + + + +   Q Q  QQ+ Q+Q P   Q +  Q Q      Q  + Q     +P
Sbjct: 215 QPGGQQQQNPQMQQQLQNQQQQQMDQQQGPADAQAQMGQQQQGQGGMQPQQMQGGQMQVP 274

Query: 78  PLQRAQLQQQQQQQMQMR-QQMQQQQQGMQSA 108
             Q+   QQ QQ Q+ M   QMQQ   G Q  
Sbjct: 275 MQQQPPQQQPQQSQLGMLPNQMQQMPGGGQGG 306

The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development. Length = 768

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	693
PF01803	240	LIM_bind: LIM-domain binding protein; InterPro: IP	100.0
KOG2181	415	consensus LIM domain binding protein LDB1/NLI/CLIM	99.97

>PF01803 LIM_bind: LIM-domain binding protein; InterPro: IPR002691 The LIM-domain binding protein, binds to the LIM domain IPR001781 from INTERPRO of LIM homeodomain proteins which are transcriptional regulators of development

Probab=100.00  E-value=2.3e-63  Score=499.21  Aligned_cols=237  Identities=38%  Similarity=0.581  Sum_probs=211.0

Q ss_pred             HHHHHHHHHHHhCC-CCCCchhHHHHHHHHhcCCCCcEEEEeeccCCCCCCccccccccccccccccccCCCCCceeEEc
Q 005513          121 ARRLMQYLYHQRQR-PPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEAT  199 (693)
Q Consensus       121 ~lRLlQfiehLs~r-p~~ndI~YWrkFV~EFFSP~AvlR~tls~~d~~g~hs~GvfPq~a~d~W~cdic~sk~~K~FEIt  199 (693)
                      ++||++|+++|+++ ++++|++||++||+|||+|+|++|||++..++.                       ..+|+|||+
T Consensus         1 ilRl~~~~~~l~~~~~~~~~~~yW~~fv~~fF~~~a~lr~~~~~~~~~-----------------------~~~k~FEi~   57 (240)
T PF01803_consen    1 ILRLLEFIERLSNFSPNLNDIEYWQKFVHEFFSPDAVLRISLWNEDGN-----------------------GSPKQFEIT   57 (240)
T ss_pred             CchHHHHHHHHHhhcCCCCcHHHHHHHHHHHcCCCeeEEEEEEcCCCC-----------------------CCCeeEEEc
Confidence            58999999999998 889999999999999999999999998643221                       125999999


Q ss_pred             ccchhHHHHHHhhcCcceEEEeeCCCcceecCCCcEEEEeCceEEEEEec-CeEEEEEEEEEEEeCcccceEEEEEeecc
Q 005513          200 FEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYE-QLRIVREGQLRIIFTNDLKILSWEFCARR  278 (693)
Q Consensus       200 ~~vLPRfF~t~FeSGV~~~qL~Ld~prE~vLpNGsi~LEc~KAs~~y~Ye-gS~Vv~~GqLRiiFd~dLKIEswEF~~~s  278 (693)
                      +++|||||+++|++||++|+|++++++|++|+||+|+|||+||+++|||+ |++|+++|+||++||++|||||||||+++
T Consensus        58 ~~~lPR~f~~~~~sGv~~~~~~l~~~~e~~l~ng~i~ie~~~~~~~~~y~~gs~v~~~G~lr~~f~~~lKIe~~df~~~~  137 (240)
T PF01803_consen   58 RPLLPRYFRTLFESGVKRMQLVLDGPREQVLPNGSIFIECPRATFIYWYEDGSQVVHEGQLRAQFDPDLKIEWWDFCTRS  137 (240)
T ss_pred             hHHHHHHHHHHhcCCceEEEEEecCCceEEcCCCeEEEEECCEEEEEEECCceEEEEEeEEEEEECccccEEEEEEEeec
Confidence            99999999999999999999999999999999999999999999999997 79999999999999999999999999999


Q ss_pred             eeccccccchhhhHHHHHHhhhhccccccccCCCCCchhhhhhchhhhHhhhhhhccccccCCCCCCCcchhhhhHhhHH
Q 005513          279 HEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQIS  358 (693)
Q Consensus       279 HEEyIpR~~Le~qvn~lie~aqK~Qs~i~EsgsdgvS~eD~k~np~m~k~karQLaksLp~s~Vn~~GIpe~vMRcLQIa  358 (693)
                      |+|||+|++|++++.....++++++...  .  +....+|+.+++.....+.+++.+.||.++|+++|||+++||||||+
T Consensus       138 ~~e~I~r~~l~~~~~~~~~~~~~~~~~~--~--~~k~~~~~~~~~~~~~~~~~~~~~~Lp~~~v~~~Gi~~~~mr~Lqi~  213 (240)
T PF01803_consen  138 HEEYIPRSALEQQASNLHPSVQIFQKLS--P--DQKQSPDMSKNSKARQQKSPQLPPSLPSSNVNEFGIPERVMRCLQIA  213 (240)
T ss_pred             ccccCcHHHHHHhhccchhhhHHhhhcc--c--ccccccchhhhhhhhhhcccccCCCcccCCCCcCCCCHHHHHHHHHH
Confidence            9999999999998766555555554443  1  12245577777666666677888889999999999999999999999


Q ss_pred             HHHhchHHHHHHHHHhC-CCHHHHHhh
Q 005513          359 EVVSSMKDLINFCWEQK-VGPIEGLKS  384 (693)
Q Consensus       359 EVMSqMKdLM~FSk~Nn-LSPiEALk~  384 (693)
                      |||++|+|||.|++.|+ +||+|||++
T Consensus       214 evms~M~~Lm~fs~~~~~~sP~eaL~~  240 (240)
T PF01803_consen  214 EVMSQMKDLMSFSKQNNILSPLEALEQ  240 (240)
T ss_pred             HHHHHHHHHHHHHHHcCCCCHHHHhcC
Confidence            99999999999999998 899999985

Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) P70662 from SWISSPROT is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons []. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development []. The Drosophila melanogaster protein Chip O18353 from SWISSPROT is required for segmentation and activity of a remote wing margin enhancer []. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development []. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions [].; GO: 0003712 transcription cofactor activity, 0005634 nucleus

>KOG2181 consensus LIM domain binding protein LDB1/NLI/CLIM [Transcription]

Probab=99.97  E-value=1.2e-31  Score=276.81  Aligned_cols=217  Identities=18%  Similarity=0.329  Sum_probs=190.3

Q ss_pred             ccCCCcCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHhcCCCCcEEEEeeccCCCCCCcccccccccccccccccc
Q 005513          109 NATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDIC  188 (693)
Q Consensus       109 ~~~~~py~~G~c~lRLlQfiehLs~rp~~ndI~YWrkFV~EFFSP~AvlR~tls~~d~~g~hs~GvfPq~a~d~W~cdic  188 (693)
                      -..+.+| ....-.||+++..+|..+.+..|-.||+.|..|||.++|+|.+++                          |
T Consensus        40 ~~rh~~y-~s~~e~Ri~emNkRLq~~se~sdN~WWDaFstEFFeDDa~Lt~~f--------------------------c   92 (415)
T KOG2181|consen   40 FQRHGNY-VSPLEFRIHEMNKRLQIFSEVSDNQWWDAFSTEFFEDDAKLTFVF--------------------------C   92 (415)
T ss_pred             ccccCCC-cCcchhhHHHHHHHHHHhcccchhhhHHhhhhhhhcCCceEEEEE--------------------------E
Confidence            3566788 456689999999999999999999999999999999999999875                          5


Q ss_pred             CCCCCceeEEcccchhHHHHHHhhcCcceEEEeeCCCcceecCCCcEEEEeCceEEEEEec---CeEEEEEEEEEEEe--
Q 005513          189 GSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYE---QLRIVREGQLRIIF--  263 (693)
Q Consensus       189 ~sk~~K~FEIt~~vLPRfF~t~FeSGV~~~qL~Ld~prE~vLpNGsi~LEc~KAs~~y~Ye---gS~Vv~~GqLRiiF--  263 (693)
                      .++++|.|.|++.+|||||++.|++||++++++|..++|. +.||++.+||+.+++++.|.   ...|+.+|.|.+.|  
T Consensus        93 lEdgpkRYtIgRtlIPrfFrsIfegG~~eLyyvLkh~ket-~hn~s~~~dcdq~~~iTqhgkp~ft~VctegrL~lEF~f  171 (415)
T KOG2181|consen   93 LEDGPKRYTIGRTLIPRFFRSIFEGGMRELYYVLKHPKET-LHNGSQAYDCDQVLQITQHGKPSFTEVCTEGRLYLEFAF  171 (415)
T ss_pred             ecCCcceeeeccchhHHHHHHHHhcchhhhhhhhcCchhh-hcCCceeeeccceeEEeecCCccceeeeccceEEEEeeh
Confidence            6788999999999999999999999999999999999776 89999999999999999997   49999999999875  


Q ss_pred             CcccceEEEEEeecceeccccccchhhhHHHHHHhhhhccccccccCCCCCchhhhhhchhhhHhhhhhhccccccCCCC
Q 005513          264 TNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLN  343 (693)
Q Consensus       264 d~dLKIEswEF~~~sHEEyIpR~~Le~qvn~lie~aqK~Qs~i~EsgsdgvS~eD~k~np~m~k~karQLaksLp~s~Vn  343 (693)
                      |..+||+.|+|.++.|.|+|+|+.|....       +        .        |.    +    ...|+.|     +++
T Consensus       172 Dd~MRIK~Wh~~ik~~rElvprsil~~~a-------~--------~--------dp----~----~ldq~~k-----Nit  215 (415)
T KOG2181|consen  172 DDVMRIKAWHLEIKRSRELVPRSILQNTA-------D--------Y--------DP----E----ALDQEQK-----NIT  215 (415)
T ss_pred             hhhhhhhheeeeeeccccccchhhhhccC-------C--------C--------Ch----h----hhChhhc-----ccc
Confidence            78899999999999999999999985311       1        0        10    1    1123333     789


Q ss_pred             CCCcchhhhhHhhHHHHHhchHHHHHHHHHhCCCHHHHHhhhHhhh
Q 005513          344 DLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHA  389 (693)
Q Consensus       344 ~~GIpe~vMRcLQIaEVMSqMKdLM~FSk~NnLSPiEALk~yv~~~  389 (693)
                      ++||++.++.+|.+|.|+..|++||+-.|...|+|+||||..+.+-
T Consensus       216 R~G~~nsTlNylrlcvILePMQelMSrhKayalsPRdclKttLFQk  261 (415)
T KOG2181|consen  216 RMGFFNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQK  261 (415)
T ss_pred             ccccchhhHHHHHHHHHHhHHHHHHHhccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	693
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 76.4 bits (187), Expect = 2e-14
 Identities = 92/617 (14%), Positives = 184/617 (29%), Gaps = 168/617 (27%)

Query: 10  MQDPNNLSQVQKKPRL-DI---KQEDIFQQQVLQQLLQRQ-----DPVQLQGRNPQLQAL 60
           +   + +S      RL      KQE++ Q+ V +++L+        P++ + R P +   
Sbjct: 55  IMSKDAVSGTL---RLFWTLLSKQEEMVQKFV-EEVLRINYKFLMSPIKTEQRQPSMMTR 110

Query: 61  LQQQQRLRQQQILQSMPPLQRAQLQQQQQQQMQMRQQMQQQQ-------QGM----QS-- 107
           +  +QR R     Q            + Q  +++RQ + + +        G+    ++  
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNV----SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166

Query: 108 ANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNV 167
           A      Y                 Q   D  I +W        SP       L +   +
Sbjct: 167 ALDVCLSYK---------------VQCKMDFKI-FWLNL-KNCNSPET----VLEMLQKL 205

Query: 168 GHHALGVFPQAAMDAWQCDICGSKSGR-GFEATFEVLPRLNEIKFGSG---VIDEL---- 219
            +     +        + D   S + +    +    L RL + K       V+  +    
Sbjct: 206 LYQIDPNWTS------RSD--HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK 257

Query: 220 ---MFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRI-VREGQLRIIFTND--LKILSWE 273
               F +L   C+    I++    K V + +       +      +  T D    +L   
Sbjct: 258 AWNAF-NL--SCK----ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-- 308

Query: 274 FCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQD--LQTNSNMVLTAGR 331
                  + LPR       N          S I+ES  +G++  D     N + + T   
Sbjct: 309 KYLDCRPQDLPRE--VLTTNPRR------LSIIAESIRDGLATWDNWKHVNCDKLTTI-- 358

Query: 332 QLAKSLELQSLNDLGFSKRYVRC------LQISEVVSSMKDLINFCWEQKVG--PIEGLK 383
            +  SL    L    + K + R         I  ++ S+  +    W   +    +  + 
Sbjct: 359 -IESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSL--I----WFDVIKSDVMVVVN 409

Query: 384 SFPRHATAAKLQMQKMQEAEQLASVQGLPTD-RNTLNKLIALH--------------PGG 428
              +++   K      Q  E   S+  +  + +  L    ALH                 
Sbjct: 410 KLHKYSLVEK------QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463

Query: 429 MNNNMSNNY-------HMVGRGALSGSAQAALALTN-YQNL-LMRQ---------NSINS 470
           +     + Y       H+          +        + +   + Q         N+  S
Sbjct: 464 LIPPYLDQYFYSHIGHHLKN----IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519

Query: 471 NPNSLQQ--EASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQ 528
             N+LQQ     P   +++            F+P   +NL      S +        L +
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL----ICSKYT------DLLR 569

Query: 529 RSLS--GNNLLQQSHPQ 543
            +L      + +++H Q
Sbjct: 570 IALMAEDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 2e-08
 Identities = 52/384 (13%), Positives = 97/384 (25%), Gaps = 142/384 (36%)

Query: 17  SQVQKKPRLDIKQEDIFQQQVLQQLLQ-----RQD-PVQLQGRNPQLQALL--------- 61
           +       LD     +   +V   LL+      QD P ++   NP+  +++         
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 62  -----QQQQRLRQQQILQS-----MPPLQRAQLQQ----------------------QQQ 89
                +     +   I++S      P   R    +                       + 
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 90  QQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQ----RPPDNTIAYWRK 145
             M +  ++ +      S    K+P +S                       +N  A  R 
Sbjct: 403 DVMVVVNKLHKY-----SL-VEKQPKES--------TISIPSIYLELKVKLENEYALHRS 448

Query: 146 FVAEYYSPRAKKRWCLSL-------YDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEA 198
            V  Y  P+      L         Y ++GHH L                          
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH-LKNIEHPER------------------ 489

Query: 199 TFEVLPRLNEIKFGSGVIDELMFLDLPRECRF------PSGIMMLEYGKAVQESVYEQLR 252
              +   +              FLD     RF               G  +  +  +QL+
Sbjct: 490 -MTLFRMV--------------FLDF----RFLEQKIRHDSTAWNASGSIL--NTLQQLK 528

Query: 253 IVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSE 312
             +      I  ND           ++E L         VN +L    K +  +  S   
Sbjct: 529 FYK----PYICDND----------PKYERL---------VNAILDFLPKIEENLICSKYT 565

Query: 313 GISQQDLQT-NSNMVLTAGRQLAK 335
            + +  L   +  +   A +Q+ +
Sbjct: 566 DLLRIALMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 3e-07
 Identities = 78/589 (13%), Positives = 147/589 (24%), Gaps = 224/589 (38%)

Query: 25  LDIKQ-ED----IFQQQVLQQLLQRQDPVQLQGRNPQLQALLQQQQRLRQQ---QILQSM 76
            D K  +D    I  ++ +  ++  +D V    R      LL +Q+ + Q+   ++L+  
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRIN 90

Query: 77  PPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQRPP 136
                + ++ +Q+Q   M +   +Q+  + + N     Y+  V   +    L        
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN--VSRLQPYLKL-------- 140

Query: 137 DNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVG---HHALGVFPQAAMDAWQCDICGSKSG 193
                               ++  L L           LG               G K+ 
Sbjct: 141 --------------------RQALLELRPAKNVLIDGVLG--------------SG-KT- 164

Query: 194 RGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRI 253
                    +            +D    L    +C+    I  L                
Sbjct: 165 --------WV-----------ALDVC--LSYKVQCKMDFKIFWLNLKN------------ 191

Query: 254 VREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEG 313
                                C        P  ++      L Q+     S    S +  
Sbjct: 192 ---------------------CNS------PETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224

Query: 314 ISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINF--- 370
           +    +Q                     L  L  SK Y  CL +   V + K    F   
Sbjct: 225 LRIHSIQ-------------------AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265

Query: 371 CWEQKV-------GPIEGLKSFPRHATAAKLQMQKMQ------EAEQL------ASVQGL 411
           C   K+          + L +    AT   + +          E + L         Q L
Sbjct: 266 C---KILLTTRFKQVTDFLSA----ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 412 PTDRNTLN----KLIA--LHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQ 465
           P +  T N     +IA  +  G       +N+  V    L+                + +
Sbjct: 319 PREVLTTNPRRLSIIAESIRDG---LATWDNWKHVNCDKLTT---------------IIE 360

Query: 466 NSINS-NPNSLQQEASPSFSNSNQSPSSSFQGPASF-----IPGSMQNLPVS-GFSSPHL 518
           +S+N   P   ++                F   + F     IP     L +         
Sbjct: 361 SSLNVLEPAEYRK---------------MFDRLSVFPPSAHIP--TILLSLIWFDVIKSD 403

Query: 519 PPQQPQQLQQRSL---SGNNL------LQQSHPQSSQGNQAMQQQMIQQ 558
                 +L + SL              +        +   A+ + ++  
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 45.6 bits (107), Expect = 5e-05
 Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 8/154 (5%)

Query: 476 QQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNN 535
           ++   P         ++  Q PA F+P          +    +PPQ       +      
Sbjct: 5   KKRVYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTP 64

Query: 536 LLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRN------GLG 589
             +Q H Q  Q   +M    +      + + N  +Q Q        +  +         G
Sbjct: 65  AQEQLHQQIDQATTSMNDMHLHN--VPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYG 122

Query: 590 FGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRS 623
               +      P +     ++        T    
Sbjct: 123 QPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTL 156

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00