Citrus Sinensis ID: 005554
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 691 | 2.2.26 [Sep-21-2011] | |||||||
| Q651U1 | 582 | Cryptochrome DASH, chloro | no | no | 0.219 | 0.261 | 0.306 | 2e-13 | |
| Q84KJ5 | 569 | Cryptochrome DASH, chloro | no | no | 0.272 | 0.330 | 0.260 | 3e-12 | |
| Q38JU2 | 577 | Cryptochrome DASH, chloro | N/A | no | 0.371 | 0.445 | 0.236 | 5e-12 | |
| Q3IPX9 | 474 | Cryptochrome DASH OS=Natr | yes | no | 0.248 | 0.362 | 0.291 | 4e-11 | |
| Q8LB72 | 447 | Blue-light photoreceptor | no | no | 0.206 | 0.319 | 0.312 | 4e-11 | |
| Q4KML2 | 520 | Cryptochrome DASH OS=Dani | yes | no | 0.256 | 0.340 | 0.266 | 8e-09 | |
| Q75WS4 | 523 | Cryptochrome DASH OS=Xeno | N/A | no | 0.370 | 0.489 | 0.241 | 1e-08 | |
| Q7NMD1 | 500 | Cryptochrome DASH OS=Gloe | no | no | 0.141 | 0.196 | 0.358 | 5e-08 | |
| Q5IFN2 | 546 | Cryptochrome DASH, chloro | no | no | 0.387 | 0.490 | 0.245 | 6e-07 | |
| P0A573 | 341 | Uncharacterized protein M | no | no | 0.189 | 0.384 | 0.297 | 9e-07 |
| >sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 24/176 (13%)
Query: 42 GRSGSAVIWFKQDLRVDDHLGLVAA-SKYQAVVPLYVFDHRILSRYSNEM---------L 91
G G A++WF+ DLRV D+ +V A + AV+P+Y D RI + ++
Sbjct: 81 GGGGVAIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRA 140
Query: 92 ELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAI 151
+ +I LEDL+++L +QG DL+IR G+ E+++ + + V A +V+A +E + +
Sbjct: 141 QFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHL 200
Query: 152 VDETLAKVSLVDG---------KPKICL-WQTPFYDIKNL----NDLPVSHNEFRK 193
V + L +V + G PK+ L W Y + +L N+LP + +FRK
Sbjct: 201 VRKGLEQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQFRK 256
|
May have a photoreceptor function. Bind ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q84KJ5|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2 | Back alignment and function description |
|---|
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 34 PTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAA-SKYQAVVPLYVFDHRILSRYSNEMLE 92
P++++ + G ++WF+ DLRV D+ L A S ++P+Y D R+ ++
Sbjct: 73 PSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLF--HTTHFFN 130
Query: 93 L----------VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVE 142
++ L DLRK+L ++G +L+IR G+ E ++ L ++ A +VFA +E
Sbjct: 131 FPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETC 190
Query: 143 YHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLN----DLPVSHNEFRKLQRP- 197
+ +V++ L +V + +W + Y +L DLP + +FRK
Sbjct: 191 SEEVDVERLVNQGLKRVG--NSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAK 248
Query: 198 ---LTSPILPPTLAGAKLEADWGPLPTFDEL 225
+S +P +L DWG +PT ++L
Sbjct: 249 CSIRSSTRIPLSLGPTPSVDDWGDVPTLEKL 279
|
May have a photoreceptor function. Bind ss- and ds-DNA in a sequence non-specific manner. Has a photolyase activity specific for cyclobutane pyrimidine dimers in ssDNA. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q38JU2|CRYD_SOLLC Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 89/346 (25%)
Query: 47 AVIWFKQDLRVDDHLGLVAA-SKYQAVVPLYVFDHRI--------LSRYSNEMLELVIFA 97
A++WF+ DLRV D+ L+ A +A++P+Y D R+ + + + +I
Sbjct: 80 AIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIEC 139
Query: 98 LEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLA 157
L DL+++L ++G DL+I+ G+ E+++ L + KA +V+A +E ++ +V L
Sbjct: 140 LNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVKVEKMVTRNLQ 199
Query: 158 K-VSLVDG----------KPKICL-WQTPFYDIKNL----NDLPVSHNEFRK----LQRP 197
K VS G K+ L W + Y I +L LP + +FRK +
Sbjct: 200 KLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYTQFRKSVEYKSKV 259
Query: 198 LTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLS 257
LP + DWG +P ++S
Sbjct: 260 RNCTKLPTSFGPPPEVGDWGHVP----------------------------------QVS 285
Query: 258 KLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQ 317
+LG + ++ KG GG +A L + Y + D
Sbjct: 286 ELGLQQEK------------------VSKGMNFVGGESAALGRVHDYF------WKKDLL 321
Query: 318 ELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKER 363
++ ++ RN GA ++T F P L G +S R ++ E ++EKER
Sbjct: 322 KVYKETRNGML--GADYSTKFSPWLASGSLSPRFIYEEVKRYEKER 365
|
May have a photoreceptor function. Bind ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity. Solanum lycopersicum (taxid: 4081) |
| >sp|Q3IPX9|CRYD_NATPD Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 46 SAVIWFKQDLRVDDHLGLV-AASKYQAVVPLYVFDHRILSRYSNEML-------ELVIF- 96
+AV+WF+ DLRV D+ L A + + V+P+Y FD RY+ +F
Sbjct: 3 TAVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDP---DRYTESEYGPPKTGGHRAVFR 59
Query: 97 --ALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDE 154
A+ DLR SL+++G DL++R GR V+ EL + A +V+A+ + R+ A V
Sbjct: 60 RQAVADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEERRRAADVAS 119
Query: 155 TLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHNE-------FRK-------LQRPLTS 200
L I L Q + + + +DLP + +RK ++ P ++
Sbjct: 120 ALDDAG-------IALRQRWTHTLYHPDDLPTPPTDIDDTFTPWRKETEAAATVRDPRSA 172
Query: 201 PILPPTLAGAKLEADWGPLPTFDELKEFVNENP 233
P PT G GP+PT + L V+E P
Sbjct: 173 PETVPTPDGLTP----GPVPTVESLG--VSEPP 199
|
May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor. Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) (taxid: 348780) |
| >sp|Q8LB72|PHR2_ARATH Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 17/160 (10%)
Query: 50 WFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEM-------LELVIFALEDL 101
WF+ DLRV D+ L +A+ + +V+P+Y FD R + S+ + +I ++ +L
Sbjct: 120 WFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSEL 179
Query: 102 RKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161
RK+L+ +GS+L++R G+ E V+ EL +E+ A +V+A EV + + + ET K
Sbjct: 180 RKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKI-ETAMKEEG 238
Query: 162 VDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR-KLQR 196
V+ K W + Y + +L DLP ++ F+ K+Q+
Sbjct: 239 VEVK---YFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQK 275
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q4KML2|CRYD_DANRE Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 44 SGSAVIWFKQDLRV-DDHLGLVAASKYQAVVPLYVFD--------HRILSRYSNEMLELV 94
S + + + DLR+ D+ + A + ++PLY FD H + L +
Sbjct: 4 SRTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFL 63
Query: 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFA-EEEVEYHLRQMMAIVD 153
+ +++DLR LK+ GS L++R G+ E+V+ EL++++ + S A EEV + V+
Sbjct: 64 LDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKS----VE 119
Query: 154 ETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSH--------NEFRKL--QRPLTSPIL 203
E L ++ + W + Y + +DLP SH +FRK + P+L
Sbjct: 120 EKLKEICCQNKVRVQTFWGSTLY---HRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVL 176
Query: 204 --PPTLAGAKLEADWGPLPTFDELKE 227
P + + GP+PTFD L +
Sbjct: 177 STPEQVKSPPSGLEEGPIPTFDSLGQ 202
|
May have a photoreceptor function (By similarity). Has weak cyclobutyl pyrimidine photolyase activity when expressed in E.coli and when tested in vitro. Danio rerio (taxid: 7955) |
| >sp|Q75WS4|CRYD_XENLA Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 75/331 (22%)
Query: 51 FKQDLRVDDHLGLVAASK-YQAVVPLYVFD--HRILSRYSN------EMLELVIFALEDL 101
+ DLR+ D+ L A + +VPLY FD H + + Y N L+ ++ ++ DL
Sbjct: 12 LRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDL 71
Query: 102 RKSLKEQGSDLMIRFGRVENVIRELVEEV-KATSVFAEEEVEYHLRQMMAIVDETLAKVS 160
R +LK++GS+L++R G+ E VI +LV+++ ++V EE + + V + ++
Sbjct: 72 RITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQACTRL- 130
Query: 161 LVDGKPKICLWQTPFYD-----IKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEAD 215
G W + Y ++++ LP + +FRK +E
Sbjct: 131 ---GIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRK-----------------AVETQ 170
Query: 216 WGPLPTFDELKEFVNENPWKLEE-SWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPR 274
PTF ++ + + P LEE S + + LTD PR
Sbjct: 171 GKVRPTF-QMPDKLKPLPSGLEEGSVPSHEDFDQQDPLTD------------------PR 211
Query: 275 KRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASF 334
S GG + L L+ Y + E + +++ + L G +
Sbjct: 212 TAFPCS-----------GGESQALQRLEHY--FWETNLVASYKDTRNGLI------GLDY 252
Query: 335 ATLFGPALCLGIISRRGVHYEAIKFEKERNA 365
+T F P L LG +S R ++ + K+EKER A
Sbjct: 253 STKFAPWLALGCVSPRYIYEQIGKYEKERTA 283
|
May have a photoreceptor function (By similarity). Has weak cyclobutyl pyrimidine photolyase activity when expressed in E.coli and when tested in vitro. Xenopus laevis (taxid: 8355) |
| >sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus (strain PCC 7421) GN=cry PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 44 SGSAVIWFKQDLRVDDHLGLVAA-SKYQAVVPLYVFDHRILSR--YSNEML-----ELVI 95
+ + ++W++ DLRV DH L +A K VV LY FD R + + E ++
Sbjct: 3 TKTVLVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLL 62
Query: 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEV 141
++ DLR+SL++ GSDL++R G E VI LV E++ +V EV
Sbjct: 63 ESVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEV 108
|
May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor. Gloeobacter violaceus (strain PCC 7421) (taxid: 251221) |
| >sp|Q5IFN2|CRYD_OSTTA Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 131/350 (37%), Gaps = 82/350 (23%)
Query: 48 VIWFKQDLRVDDHLGLVAASKYQA------VVPLYVFDH-------RILSRYSNEMLELV 94
VIWF+ DLR+ D+ + A+ + VVP+YVFD R L+R+ +
Sbjct: 7 VIWFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFGAGRGKFT 66
Query: 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRE--LVEEVKATSVFAEEEVEYHLRQMMAIV 152
+ + DL+ SL+ GSDL++R G+ +VI E L T + + EV +M V
Sbjct: 67 LECVGDLKTSLRALGSDLLVRCGKSRDVIAELTLTGANDRTIILTQTEVTSEETEMDVAV 126
Query: 153 DETLAKVSLVDGKPKICL---WQTPFYDIKN--------LNDLPVSHNEFRKLQRPLTSP 201
E + G + W + Y I + L+DLP FR
Sbjct: 127 -ERATRERARGGAASATMERHWGSTLYHIDDVPFDVTSGLSDLPDVFTPFRN-------- 177
Query: 202 ILPPTLAGAKLEA-----DWGPLPTFDELKEFVNENPWKLEE-SWTLINNMSAETILTDK 255
K+E+ D P PT +EL P +E W M + L
Sbjct: 178 ---------KVESKCKVRDVIPAPTANELGHV----PASVEGFEW-----MPKPSDLPFA 219
Query: 256 LSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDD 315
S++ + + + R LD GG + L ++ YL
Sbjct: 220 SSEIAMDCDKRIKDCLDERSVLD-----------FKGGESNALARVKYYL---------- 258
Query: 316 WQ--ELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKER 363
W+ L G ++T P L LG +S R V E ++E ER
Sbjct: 259 WESDRLATYFETRNGMLGGDYSTKLAPWLALGCVSPRHVVSEIRRYESER 308
|
May have a photoreceptor function. Bind ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity. Ostreococcus tauri (taxid: 70448) |
| >sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+GY+ + +AG GPAILL+HG G + +A V A LLG G+S+KP
Sbjct: 25 HGYRRAFRIAGS-GPAILLIHGIGDNSTTWNGVHAKLAQRFT-VIAPDLLGHGQSDKPRA 82
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG---- 529
Y+ ++ +RD + E V ++G+S+GG A +P +V ++L+++ G
Sbjct: 83 DYSVAAYANGMRDLLSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTKD 142
Query: 530 -NVIPEYSFLQFSNERQA 546
N++ + L +E A
Sbjct: 143 VNIVFRLASLPMGSEAMA 160
|
Mycobacterium bovis (taxid: 1765) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 691 | ||||||
| 255539721 | 691 | hydrolase, putative [Ricinus communis] g | 0.994 | 0.994 | 0.707 | 0.0 | |
| 296084158 | 704 | unnamed protein product [Vitis vinifera] | 0.989 | 0.971 | 0.650 | 0.0 | |
| 359490262 | 722 | PREDICTED: uncharacterized protein LOC10 | 0.958 | 0.916 | 0.650 | 0.0 | |
| 356529875 | 654 | PREDICTED: uncharacterized protein LOC10 | 0.926 | 0.978 | 0.663 | 0.0 | |
| 240256063 | 692 | DNA photolyase [Arabidopsis thaliana] gi | 0.969 | 0.968 | 0.597 | 0.0 | |
| 449488669 | 679 | PREDICTED: uncharacterized LOC101210685 | 0.913 | 0.929 | 0.624 | 0.0 | |
| 449451936 | 679 | PREDICTED: uncharacterized protein LOC10 | 0.913 | 0.929 | 0.621 | 0.0 | |
| 212275864 | 706 | uncharacterized protein LOC100191423 [Ze | 0.984 | 0.963 | 0.522 | 0.0 | |
| 147827517 | 1716 | hypothetical protein VITISV_024326 [Viti | 0.797 | 0.321 | 0.584 | 0.0 | |
| 115480339 | 695 | Os09g0532700 [Oryza sativa Japonica Grou | 0.908 | 0.903 | 0.534 | 0.0 |
| >gi|255539721|ref|XP_002510925.1| hydrolase, putative [Ricinus communis] gi|223550040|gb|EEF51527.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/693 (70%), Positives = 565/693 (81%), Gaps = 6/693 (0%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
MAL+ FPRFLS P S LR C C S + T++ R+ SA++WFKQDLRVDDH
Sbjct: 1 MALLFFPRFLS-PSPSLRTPPLRFNNPCCFC-SLSPQTTNRRRTSSAILWFKQDLRVDDH 58
Query: 61 LGLVAASKYQ--AVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR 118
GL+ AS + +++PLYVFDH ILSRYS+EMLE+V+FAL+DLR SLKEQGS+LMIRFG
Sbjct: 59 FGLLQASNHSPSSLLPLYVFDHIILSRYSDEMLEIVLFALQDLRNSLKEQGSNLMIRFGS 118
Query: 119 VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVS-LVDGKPKICLWQTPFYD 177
E VIR+LV+EV+AT VFAEEEVEYHLR + IV + L K +D PKI LWQTPFYD
Sbjct: 119 AEGVIRDLVQEVEATVVFAEEEVEYHLRSTVEIVKQNLTKSQPHLDVNPKIVLWQTPFYD 178
Query: 178 IKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLE 237
IKNL DLP SH+ F+KLQ P+TSPILPPTL +E DWG +PT DELK+FVNE+P+KL+
Sbjct: 179 IKNLKDLPASHDHFKKLQLPVTSPILPPTLPATPMELDWGSMPTLDELKKFVNESPFKLK 238
Query: 238 ESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAV 297
ESW+LI M ETIL +KLSK + + NLN S RKR++ S FVT + N VGGGTN V
Sbjct: 239 ESWSLIKEMPTETILHNKLSKF-RGTDVNLNFNQSQRKRVENSVFVTQRQNFVGGGTNKV 297
Query: 298 LNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAI 357
LNAL AYLRYLEGT RDDWQE+ E+LRNAESRDGASF TLFGP+LCLGIISRR VHYEAI
Sbjct: 298 LNALAAYLRYLEGTARDDWQEVHERLRNAESRDGASFFTLFGPSLCLGIISRRRVHYEAI 357
Query: 358 KFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQ 417
K+EKERNAGFLSPFGYS T+AAAADAVCSMEWYWLM+L+ S G YS RIWRWNGY
Sbjct: 358 KYEKERNAGFLSPFGYSTTTVAAAADAVCSMEWYWLMALKGQISVGGTYSVRIWRWNGYL 417
Query: 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTE 477
IQYTV G EGPA+LLVHGFGAFLEHYRDNI DI+ GGNRVWAIT+LGFG+SEKPN+VYTE
Sbjct: 418 IQYTVVGHEGPAVLLVHGFGAFLEHYRDNIRDISKGGNRVWAITILGFGKSEKPNVVYTE 477
Query: 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSF 537
LMWSELL+DF +EVVGEPVHLIGNSIGGYF +IVAC WPA+VKS+VLINSAG+VIP Y +
Sbjct: 478 LMWSELLKDFIIEVVGEPVHLIGNSIGGYFTSIVACFWPALVKSIVLINSAGDVIPGYGY 537
Query: 538 LQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGV 597
QF+ ERQ S RLGA+LLL YLRLNI +K CYPT+ ERADD LI+EMLRAS+DPGV
Sbjct: 538 PQFTKERQTSVIARLGAELLLLYLRLNIRTIMKNCYPTKTERADDLLINEMLRASFDPGV 597
Query: 598 LVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELD 657
+VVLESIFSF LSLPLNYLLE K+KVLI+QG+KDPISDSK KV+M K+HC+G+VIR+LD
Sbjct: 598 IVVLESIFSFNLSLPLNYLLEDLKDKVLIVQGMKDPISDSKFKVSMLKDHCSGVVIRKLD 657
Query: 658 AGHCPHDEKPEEVNSIISEWIVTIESKVPAESF 690
AGHCPHDE PEEVN II EW+V ESK+ A S
Sbjct: 658 AGHCPHDELPEEVNPIICEWVVAAESKILAGSL 690
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084158|emb|CBI24546.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/702 (65%), Positives = 552/702 (78%), Gaps = 18/702 (2%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
M+L++FPRFLS N R R + S A +++ S AV+WFK DLR+DDH
Sbjct: 1 MSLLTFPRFLSFSFSPNTLSFGRPRSRFPLAASKGAESSAIDDS-VAVLWFKHDLRIDDH 59
Query: 61 LGLVAA-SKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV 119
GLVAA S+++ V+PLYVFD RILSR+S+EMLELV+ A+EDLR+SLK+QGS+LMIRFG
Sbjct: 60 PGLVAAASRHRTVIPLYVFDRRILSRFSDEMLELVLVAMEDLRESLKDQGSNLMIRFGSA 119
Query: 120 ENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIK 179
E IRE+V+EVKAT++FAEEEVE+ LR+M+ V ETLA L++ P++ +W TPFYDIK
Sbjct: 120 EKTIREIVKEVKATTIFAEEEVEHELRKMIDTVQETLATAPLLERSPEVVMWHTPFYDIK 179
Query: 180 NLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEES 239
+L LP H++F+KLQ P+TSP+ PP L ++ DWGP+P+ +LK+FVN NP K +E
Sbjct: 180 DLKYLPPLHHDFKKLQLPITSPLGPPRLPSVEIGLDWGPVPSLADLKQFVNGNPSKSKED 239
Query: 240 WTLINNMSAETILTDK--------------LSKLGKR--SKRNLNNQHSPRKRLDKSFFV 283
WT I AE +L + + L R ++ NLN++ + RKRL KS FV
Sbjct: 240 WTSIKETIAEKMLLNDQIDQAEPPNTLIGGMESLKSRGSNRINLNHEQTQRKRLQKSVFV 299
Query: 284 TDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALC 343
T GN VGGGTNAVLNAL AYLRYLEGT RDDWQE+ EKLRNAESRDGASF LFG AL
Sbjct: 300 TSNGNLVGGGTNAVLNALAAYLRYLEGTGRDDWQEVHEKLRNAESRDGASFGILFGSALF 359
Query: 344 LGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNE 403
LGIISRR V++EAIK+EKERNAGFLSPFGYSAATIAAAADAVC+MEWYWLM+L+S S+E
Sbjct: 360 LGIISRRRVYHEAIKYEKERNAGFLSPFGYSAATIAAAADAVCTMEWYWLMALKSQISDE 419
Query: 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL 463
G +S RIWRWNGY IQYTV G EGPA+LLVHGFGAF EHYRDNI+ +AD G RVWAITLL
Sbjct: 420 GPFSIRIWRWNGYLIQYTVVGHEGPAVLLVHGFGAFFEHYRDNIHPVADSGKRVWAITLL 479
Query: 464 GFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVV 523
GFG+SEKPN+ Y+ELMW+ELLRDF ++VVGEPVHL+GNSIGGYF++IVA LWPA+ KSV+
Sbjct: 480 GFGKSEKPNVFYSELMWAELLRDFIIQVVGEPVHLVGNSIGGYFISIVAGLWPALAKSVI 539
Query: 524 LINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583
LINSAGNVIPEYS + S ER+ SG LGA+LLL +LRL + + VK CYP + RADDW
Sbjct: 540 LINSAGNVIPEYSSVPSSKERRTSGAAWLGARLLLPFLRLRLPSIVKNCYPAKMARADDW 599
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643
L++EMLR+SYDPGVLVVLESIFSF LS+PLNYLL+GF EKVL IQG+KDPISDS+SK+AM
Sbjct: 600 LLNEMLRSSYDPGVLVVLESIFSFNLSIPLNYLLKGFNEKVLFIQGVKDPISDSESKLAM 659
Query: 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKV 685
+EH AGI I+EL AGHCPHDE PEEVN II +WI TIESK+
Sbjct: 660 LREHFAGIAIKELSAGHCPHDELPEEVNYIICDWIATIESKL 701
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359490262|ref|XP_002265202.2| PREDICTED: uncharacterized protein LOC100259267 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/692 (65%), Positives = 542/692 (78%), Gaps = 30/692 (4%)
Query: 11 SRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAA-SKY 69
S+P++ NH S A +S AV+WFK DLR+DDH GLVAA S++
Sbjct: 41 SQPVKHNHNSS-------------KGAESSAIDDSVAVLWFKHDLRIDDHPGLVAAASRH 87
Query: 70 QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEE 129
+ V+PLYVFD RILSR+S+EMLELV+ A+EDLR+SLK+QGS+LMIRFG E IRE+V+E
Sbjct: 88 RTVIPLYVFDRRILSRFSDEMLELVLVAMEDLRESLKDQGSNLMIRFGSAEKTIREIVKE 147
Query: 130 VKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHN 189
VKAT++FAEEEVE+ LR+M+ V ETLA L++ P++ +W TPFYDIK+L LP H+
Sbjct: 148 VKATTIFAEEEVEHELRKMIDTVQETLATAPLLERSPEVVMWHTPFYDIKDLKYLPPLHH 207
Query: 190 EFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAE 249
+F+KLQ P+TSP+ PP L ++ DWGP+P+ +LK+FVN NP K +E WT I AE
Sbjct: 208 DFKKLQLPITSPLGPPRLPSVEIGLDWGPVPSLADLKQFVNGNPSKSKEDWTSIKETIAE 267
Query: 250 TILTDK--------------LSKLGKR--SKRNLNNQHSPRKRLDKSFFVTDKGNTVGGG 293
+L + + L R ++ NLN++ + RKRL KS FVT GN VGGG
Sbjct: 268 KMLLNDQIDQAEPPNTLIGGMESLKSRGSNRINLNHEQTQRKRLQKSVFVTSNGNLVGGG 327
Query: 294 TNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVH 353
TNAVLNAL AYLRYLEGT RDDWQE+ EKLRNAESRDGASF LFG AL LGIISRR V+
Sbjct: 328 TNAVLNALAAYLRYLEGTGRDDWQEVHEKLRNAESRDGASFGILFGSALFLGIISRRRVY 387
Query: 354 YEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRW 413
+EAIK+EKERNAGFLSPFGYSAATIAAAADAVC+MEWYWLM+L+S S+EG +S RIWRW
Sbjct: 388 HEAIKYEKERNAGFLSPFGYSAATIAAAADAVCTMEWYWLMALKSQISDEGPFSIRIWRW 447
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
NGY IQYTV G EGPA+LLVHGFGAF EHYRDNI+ +AD G RVWAITLLGFG+SEKPN+
Sbjct: 448 NGYLIQYTVVGHEGPAVLLVHGFGAFFEHYRDNIHPVADSGKRVWAITLLGFGKSEKPNV 507
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
Y+ELMW+ELLRDF ++VVGEPVHL+GNSIGGYF++IVA LWPA+ KSV+LINSAGNVIP
Sbjct: 508 FYSELMWAELLRDFIIQVVGEPVHLVGNSIGGYFISIVAGLWPALAKSVILINSAGNVIP 567
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
EYS + S ER+ SG LGA+LLL +LRL + + VK CYP + RADDWL++EMLR+SY
Sbjct: 568 EYSSVPSSKERRTSGAAWLGARLLLPFLRLRLPSIVKNCYPAKMARADDWLLNEMLRSSY 627
Query: 594 DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVI 653
DPGVLVVLESIFSF LS+PLNYLL+GF EKVL IQG+KDPISDS+SK+AM +EH AGI I
Sbjct: 628 DPGVLVVLESIFSFNLSIPLNYLLKGFNEKVLFIQGVKDPISDSESKLAMLREHFAGIAI 687
Query: 654 RELDAGHCPHDEKPEEVNSIISEWIVTIESKV 685
+EL AGHCPHDE PEEVN II +WI TIESK+
Sbjct: 688 KELSAGHCPHDELPEEVNYIICDWIATIESKL 719
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356529875|ref|XP_003533512.1| PREDICTED: uncharacterized protein LOC100813721 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/642 (66%), Positives = 527/642 (82%), Gaps = 2/642 (0%)
Query: 44 SGSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRK 103
+G+A++WFK DLR DDH L+AAS + ++VP+YVFDHRILSR+S+E LELV+ A+EDLRK
Sbjct: 4 TGTAILWFKHDLRTDDHPALLAASAFPSLVPIYVFDHRILSRFSDETLELVLLAVEDLRK 63
Query: 104 SLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVD 163
SLK++GSDL+IRFG ENVI++L EVKAT VFAE+EVEY LR ++ +V + L VS+
Sbjct: 64 SLKDRGSDLVIRFGNAENVIQQLATEVKATCVFAEQEVEYELRFIIDVVKQRLKSVSVPQ 123
Query: 164 GKPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPT--LAGAKLEADWGPLPT 221
G P+I LW+TPFYDIK+L +LP S++EF+KL+ +T+P+ L GA++E DWG LP+
Sbjct: 124 GSPRIELWRTPFYDIKDLENLPASYDEFKKLRLSVTTPLQLSVSKLPGAEIELDWGVLPS 183
Query: 222 FDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSF 281
+D++K F+ N K E W+L+ SAETIL K+ K G +R+ + + + S
Sbjct: 184 YDDIKGFLTSNQQKSGEKWSLMKETSAETILRRKVLKSGNNIERSSRFGLTQSRERNGSV 243
Query: 282 FVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPA 341
FVT KGN VGG TN VLNAL AYLRYLEGT RDDWQE+ EK+R +ESR+GASF LFGPA
Sbjct: 244 FVTQKGNIVGGSTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRNGASFIGLFGPA 303
Query: 342 LCLGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRS 401
L LGIISRR VHYEAIK+EKERNAGFLSPFGYSAATIAAA DAVCSMEWYWL++L++ ++
Sbjct: 304 LSLGIISRRKVHYEAIKYEKERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLLALKNQKN 363
Query: 402 NEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAIT 461
N G++STRIW+W G+ IQY+VAG++GPAILLVHGFGAF EHYRDNI+ +A+ GNRVWAIT
Sbjct: 364 NHGIHSTRIWKWKGFLIQYSVAGEDGPAILLVHGFGAFWEHYRDNIHGLAESGNRVWAIT 423
Query: 462 LLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
+LGFG+SEKPN+VYTEL+W+ELLRDF V++VGEPVHL+GNSIGGY VAIVA +W ++KS
Sbjct: 424 ILGFGKSEKPNVVYTELLWAELLRDFIVDIVGEPVHLVGNSIGGYLVAIVARVWSDLIKS 483
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+VLINSAGNVIP YSF+ S +RQ SG LG+++L+FYLRL +K+CYPTR ERAD
Sbjct: 484 IVLINSAGNVIPRYSFIPLSTDRQTSGASWLGSRILVFYLRLRTQELLKKCYPTRVERAD 543
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641
D+LISEMLRASYDPGVLVVLESIFSF LS+PLN+LLE KEKVLIIQG+KDPISDS SKV
Sbjct: 544 DFLISEMLRASYDPGVLVVLESIFSFNLSIPLNFLLEDVKEKVLIIQGMKDPISDSNSKV 603
Query: 642 AMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIES 683
AM KEHC G++I+ELDAGHCPHDE PE VN+II EWI+ +ES
Sbjct: 604 AMLKEHCDGVMIKELDAGHCPHDEVPERVNTIICEWILGVES 645
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240256063|ref|NP_194259.4| DNA photolyase [Arabidopsis thaliana] gi|332659635|gb|AEE85035.1| DNA photolyase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/681 (59%), Positives = 518/681 (76%), Gaps = 11/681 (1%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
MA ++ P FL L N R++ +C CC+S +AT++G +AV+WFK DLRVDDH
Sbjct: 1 MAFLALPHFLHLRLRRNDRKN-----RCKCCLS---SATNEG--STAVVWFKHDLRVDDH 50
Query: 61 LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVE 120
GL+AASK++AV+PLYV D RILSRY+ + LEL I ALEDLRK+LK+QGS+LM+R+G E
Sbjct: 51 PGLLAASKHRAVIPLYVLDRRILSRYTTDTLELAIIALEDLRKTLKKQGSNLMLRYGNAE 110
Query: 121 NVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN 180
NVI +LV+EV+A VF EEEVEYHL +++ V L VSL P+I W+TPFY+ +N
Sbjct: 111 NVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAVKNKLEGVSLSGESPRIVAWRTPFYESQN 170
Query: 181 LNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESW 240
L DLP S EF+KL+ PLT P+ + E WG +PT D+LK+++ E+ W++E SW
Sbjct: 171 LTDLPQSWEEFKKLKLPLTLPVPAAKFSSPGSELQWGSVPTLDDLKDYLKESLWEIENSW 230
Query: 241 TLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNA 300
+ SAE +L ++L L + S + + S K++D S FVT K +TVGGG VLNA
Sbjct: 231 REMAQASAERVLMERLGNLKESSMEPIVDG-SLGKKVDNSVFVTSKRDTVGGGNEVVLNA 289
Query: 301 LQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE 360
L YLRYLEGT RDDWQE+ +LR+AE+R GASF LFGP LCLGI+SRR VHYEAI++E
Sbjct: 290 LAGYLRYLEGTSRDDWQEVHARLRDAETRPGASFFKLFGPVLCLGIVSRRSVHYEAIEYE 349
Query: 361 KERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQY 420
KERNAGF+SPFGYSAAT++AA DAVCSMEWY+L++L R +E ++ RIWRW GY IQY
Sbjct: 350 KERNAGFISPFGYSAATVSAATDAVCSMEWYYLLALSRERIDEKRHAIRIWRWKGYLIQY 409
Query: 421 TVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMW 480
TV G EGPA+LLVHGFGAFLEHYRDN+ +I + NRVW IT+LGFG+SEKPNI+YTEL+W
Sbjct: 410 TVVGNEGPAVLLVHGFGAFLEHYRDNVDNIVNSKNRVWTITVLGFGKSEKPNIIYTELLW 469
Query: 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQF 540
+ELLRDF EVVGEP H +GNSIGGYFVA++A LWPA+VKSVVL+NSAGNV+P YS L
Sbjct: 470 AELLRDFMAEVVGEPAHCVGNSIGGYFVALMAFLWPALVKSVVLVNSAGNVVPGYSPLPI 529
Query: 541 SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVV 600
S ER+ + G++LLLF+L+LN+ +K CYP + ERADD+L++EMLRAS DPGV++V
Sbjct: 530 SRERRVPFGAQFGSRLLLFFLQLNVKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMV 589
Query: 601 LESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGH 660
LESIF F LSLPLNYLL+GF+EK L+IQG++DPISD + KVA+ KE C +VI+++ AGH
Sbjct: 590 LESIFGFDLSLPLNYLLKGFEEKTLVIQGMEDPISDPQKKVALLKELCPAMVIKKVKAGH 649
Query: 661 CPHDEKPEEVNSIISEWIVTI 681
CPHDE EEVN II EWIV +
Sbjct: 650 CPHDEISEEVNPIICEWIVKV 670
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449488669|ref|XP_004158137.1| PREDICTED: uncharacterized LOC101210685 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/642 (62%), Positives = 496/642 (77%), Gaps = 11/642 (1%)
Query: 47 AVIWFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSL 105
AV+WFK DLR+ DH L AAS ++ +++PLY+FD RILSR+S++MLE+++ ALE LR SL
Sbjct: 43 AVLWFKHDLRIHDHPALHAASSQFSSLIPLYIFDSRILSRFSDQMLEILLLALESLRHSL 102
Query: 106 KEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGK 165
+++G DL+I+FG E+++RELV +VKAT VFAEEEVE+ L +M V +TL S +
Sbjct: 103 RDRGLDLLIKFGDAESILRELVVQVKATHVFAEEEVEHELCLLMDDVSQTL---STLIRS 159
Query: 166 PKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDEL 225
P + +W+TPFYDIK++ LP S++EFRKLQ P+T P+ PTL ++E DWG +PTFD L
Sbjct: 160 PDLTIWRTPFYDIKSVESLPESYDEFRKLQLPVTCPLSSPTLPCLEMELDWGTMPTFDAL 219
Query: 226 KEFVNENPWKLEE---SWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFF 282
KEF+N +L E W I N +AET++ K SK G ++ N +++ S +R+ S F
Sbjct: 220 KEFMNST--RLNEPSDEWYSIKNTTAETMVRAKFSKRGN-NENNPSSRESRTERMRNSIF 276
Query: 283 VTDKG-NTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPA 341
T +G N + GGT VLNAL AY+RY EGT RDDWQ L E +RN+ESRDGASF LFGPA
Sbjct: 277 TTQRGKNFMMGGTEGVLNALAAYIRYNEGTSRDDWQALHEMVRNSESRDGASFIKLFGPA 336
Query: 342 LCLGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRS 401
+ LGIIS+R HYEAIK+EKERNAGFLSPFGYSA ++AAA DAV S EWYWLM L+S
Sbjct: 337 IHLGIISKRKAHYEAIKYEKERNAGFLSPFGYSARSVAAAVDAVLSSEWYWLMGLKSKGR 396
Query: 402 NEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAIT 461
G YS R WRWNG+ +QYTV G +GPA LLVHGFGAFLEHYRDNI+ IA+GG +VWA+T
Sbjct: 397 RLGSYSYRNWRWNGFLVQYTVVGCDGPATLLVHGFGAFLEHYRDNIHGIAEGGKQVWAVT 456
Query: 462 LLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
+LGFGRSEKPNIVY+E MW+E +RDF VEVVG PVHL+GNSIGGY VAIVACLWPA+VKS
Sbjct: 457 MLGFGRSEKPNIVYSEEMWAEFVRDFIVEVVGRPVHLVGNSIGGYIVAIVACLWPALVKS 516
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+VLINSAG+VIP Y FL +RQ S LGA+LLL YLR+ + +K CYPTR +RAD
Sbjct: 517 IVLINSAGSVIPGYLFLPLKKDRQVSIAAWLGARLLLSYLRVKTKDILKNCYPTRTDRAD 576
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641
DWLI+EMLRAS DPG LV+LESIFSF L++PLNYLLEG + +VLIIQG+KDPI +SKS +
Sbjct: 577 DWLINEMLRASKDPGGLVLLESIFSFDLTVPLNYLLEGLEGRVLIIQGMKDPIYNSKSLL 636
Query: 642 AMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIES 683
M KEHC + I+ELDAGHCPHDE PEEVNSI+ EWIV IES
Sbjct: 637 GMLKEHCVRVTIKELDAGHCPHDELPEEVNSILCEWIVGIES 678
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449451936|ref|XP_004143716.1| PREDICTED: uncharacterized protein LOC101210685 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/642 (62%), Positives = 496/642 (77%), Gaps = 11/642 (1%)
Query: 47 AVIWFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSL 105
AV+WFK DLR+ DH L AAS ++ +++PLY+FD RILSR+S++MLE+++ ALE LR SL
Sbjct: 43 AVLWFKHDLRIHDHPALHAASSQFSSLIPLYIFDSRILSRFSDQMLEILLLALESLRHSL 102
Query: 106 KEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGK 165
+++G DL+I+FG E+++RELV +VKAT VFAEEEVE+ L +M V +TL S +
Sbjct: 103 RDRGLDLLIKFGDAESILRELVVQVKATHVFAEEEVEHELCLLMDDVSQTL---STLIRS 159
Query: 166 PKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDEL 225
P + +W+TPFYDIK++ LP S++EFRKLQ P+T P+ PTL ++E DWG +PTFD L
Sbjct: 160 PDLTIWRTPFYDIKSVESLPESYDEFRKLQLPVTCPLSSPTLPCLEMELDWGTMPTFDAL 219
Query: 226 KEFVNENPWKLEE---SWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFF 282
KEF+N +L E W I N +AET++ K SK G ++ N +++ S +R+ S F
Sbjct: 220 KEFMNST--RLNEPSDEWYSIKNTTAETMVRAKFSKRGN-NENNPSSRESRTERMGNSIF 276
Query: 283 VTDKG-NTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPA 341
T +G N + GGT VLNAL AY+RY EGT RDDWQ L E +RN+ESRDGASF LFGPA
Sbjct: 277 STQRGKNFMMGGTEGVLNALAAYIRYNEGTSRDDWQALHEMVRNSESRDGASFIKLFGPA 336
Query: 342 LCLGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRS 401
+ LGIIS+R HYEAIK+EKERNAGFLSPFGYSA ++AAA DAV S EWYWLM L+S
Sbjct: 337 IHLGIISKRKAHYEAIKYEKERNAGFLSPFGYSARSVAAAVDAVLSSEWYWLMGLKSKGR 396
Query: 402 NEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAIT 461
G YS R WRWNG+ +QYTV G +GPA LLVHGFGAFLEHYRDNI+ IA+GG +VWA+T
Sbjct: 397 RLGSYSYRNWRWNGFLVQYTVVGCDGPATLLVHGFGAFLEHYRDNIHGIAEGGKQVWAVT 456
Query: 462 LLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
+LGFGRSEKPNIVY+E MW+E +RDF VEVVG PVHL+GNSIGGY VAIVACLWPA+VKS
Sbjct: 457 MLGFGRSEKPNIVYSEEMWAEFVRDFIVEVVGRPVHLVGNSIGGYIVAIVACLWPALVKS 516
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+VLINSAG+VIP Y +L +RQ S LGA+LLL YLR+ + +K CYPTR +RAD
Sbjct: 517 IVLINSAGSVIPGYLYLPLKKDRQVSIAAWLGARLLLSYLRVKTKDILKNCYPTRTDRAD 576
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641
DWLI+EMLRAS DPG LV+LESIFSF L++PLNYLLEG + +VLIIQG+KDPI +SKS +
Sbjct: 577 DWLINEMLRASKDPGGLVLLESIFSFDLTVPLNYLLEGLEGRVLIIQGMKDPIYNSKSLL 636
Query: 642 AMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIES 683
M K+HC + I+ELDAGHCPHDE PEEVNSI+ EWIV IES
Sbjct: 637 GMLKDHCVRVTIKELDAGHCPHDELPEEVNSILCEWIVGIES 678
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|212275864|ref|NP_001130328.1| uncharacterized protein LOC100191423 [Zea mays] gi|195612420|gb|ACG28040.1| deoxyribodipyrimidine photolyase family protein [Zea mays] gi|414886442|tpg|DAA62456.1| TPA: deoxyribodipyrimidine photolyase family protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/701 (52%), Positives = 480/701 (68%), Gaps = 21/701 (2%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
MAL++ P +HRR LR+R + V V+ A + +AV+WFK DLR+DDH
Sbjct: 1 MALLALRFGPLLPAPPHHRRVLRNRCR-VRIVASNAPTPVRDGGAAAVVWFKHDLRIDDH 59
Query: 61 LGLVAA--SKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR 118
GL AA + VVPLYVFD RIL+ YS++MLEL++FAL+DL+ +LK Q SDL+I G
Sbjct: 60 PGLAAAVSEPRRPVVPLYVFDRRILAGYSDKMLELLLFALKDLKMTLKSQDSDLLIGLGN 119
Query: 119 VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKP-KICLWQTPFYD 177
E+V+ +LV EV+A VF EEEVEY +R ++A V+ +L+ S G P KI W P YD
Sbjct: 120 AEDVVLKLVNEVQAGLVFTEEEVEYRVRDVLANVESSLSNGSFSWGSPPKIVAWSAPLYD 179
Query: 178 IKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNE-NPWKL 236
KNL +P SH++F K + PL +P+ TL LE D G LPT +ELK F+ E P
Sbjct: 180 YKNLGAVPTSHDDFLKKKLPLATPLAAATLPALNLELDTGSLPTLEELKCFLKEITP--- 236
Query: 237 EESWTLINNMSAETILTDKLSKLGKRSKRNLN-------------NQHSPRKRLDKSFFV 283
E++W + M A +IL +S+ +S L+ + + KR+ S F
Sbjct: 237 EDNWAPLKRMPARSILKRTISQRKIKSNATLSTINEENIDDAATMDSVASGKRIINSKFA 296
Query: 284 TDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALC 343
++ V GGT L+AL AYL+YLEGT WQEL +K+R AE+R GASF LFGPA+
Sbjct: 297 SENSLEVSGGTEITLDALAAYLKYLEGTGNASWQELHDKVRLAETRYGASFYILFGPAIQ 356
Query: 344 LGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNE 403
LG+ISRR + E I++EK+RNAGFLSPFGYS T+ +A DA+CSMEWYWL++ +S E
Sbjct: 357 LGVISRRKAYTETIQYEKDRNAGFLSPFGYSTPTVTSAVDAICSMEWYWLLASKSQVCIE 416
Query: 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL 463
G YS RIWRW GY +QYT G EGP +LLVHGFGAFLEH+RDNI IA G+RVWAITL+
Sbjct: 417 GKYSIRIWRWKGYLVQYTFLGNEGPPVLLVHGFGAFLEHFRDNIDKIAATGHRVWAITLV 476
Query: 464 GFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVV 523
GFG+SEKPN+ Y+EL WSELLRDF VE+V EPVHL+GNSIGGY AI A LWP++ KS+V
Sbjct: 477 GFGKSEKPNVNYSELFWSELLRDFIVEIVREPVHLLGNSIGGYLCAIAAGLWPSLAKSLV 536
Query: 524 LINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583
L+NSAG+V+P YSF+ S ER+ S RL AQLLL +LR +K+ YPTR ER D
Sbjct: 537 LLNSAGSVVPNYSFIPLSEERRTSWISRLQAQLLLLFLRSRAEGILKEYYPTRTERVDKP 596
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643
L+ +++RASYDPG VLES+F+F LS+PLN+L + F K+L+IQG+KDP++ S++ V M
Sbjct: 597 LLDQIVRASYDPGAAKVLESVFNFNLSIPLNFLFDSFGGKILVIQGMKDPLTKSEAFVTM 656
Query: 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESK 684
+EHC+ + IREL+AGH PHDE P+EVN+I+ +W+ IE K
Sbjct: 657 LREHCSKVQIRELNAGHAPHDEVPDEVNTILCKWVEQIEVK 697
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147827517|emb|CAN66342.1| hypothetical protein VITISV_024326 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/638 (58%), Positives = 448/638 (70%), Gaps = 87/638 (13%)
Query: 82 ILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEV 141
+LS +S+EMLELV+ A+EDLR+SLK+QGS+LMIRFG E IRE+V+EVKAT++FAEEEV
Sbjct: 1129 LLSXFSDEMLELVLVAMEDLRESLKDQGSNLMIRFGSAEKTIREIVKEVKATTIFAEEEV 1188
Query: 142 EYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSP 201
E+ LR+M+ V ETLA L++ P++ +W TPFYDIK+L LP H++F+KLQ P+TSP
Sbjct: 1189 EHELRKMIDTVQETLATAPLLERSPEVVMWHTPFYDIKDLKYLPPLHHDFKKLQLPITSP 1248
Query: 202 ILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDK------ 255
+ PP L ++ DWGP+P+ +LK+FVN NP K +E WT I AE +L +
Sbjct: 1249 LGPPRLPSVEIGLDWGPVPSLADLKQFVNGNPSKSKEDWTSIKETIAEKMLLNDQIDQAE 1308
Query: 256 --------LSKLGKRSKR--NLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYL 305
+ L R NLN++ + RKRL KS FVT GN V GGTNAVLNAL AYL
Sbjct: 1309 PPNTLIGGMESLKSRGSNXINLNHEQTQRKRLQKSVFVTSXGNLVXGGTNAVLNALAAYL 1368
Query: 306 RYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKERNA 365
RYLEGT RDDWQE+ EKLRNAESRDGASF LFG AL LGIISRR V++EAIK+EKERNA
Sbjct: 1369 RYLEGTGRDDWQEVHEKLRNAESRDGASFGILFGSALFLGIISRRRVYHEAIKYEKERNA 1428
Query: 366 GFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQ------ 419
GFLSPFGYSAATIAAAADAVC+MEWYWLM+L+S S+EG +S RIWRWNGY IQ
Sbjct: 1429 GFLSPFGYSAATIAAAADAVCTMEWYWLMALKSQISDEGPFSIRIWRWNGYLIQAKAETI 1488
Query: 420 ------------YTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGR 467
YTV G EGPA+LLVHGFGAF EHYRDNI+ +AD G RVWAITLLGFG+
Sbjct: 1489 LKKAKRPHHIQKYTVVGHEGPAVLLVHGFGAFFEHYRDNIHPVADSGKRVWAITLLGFGK 1548
Query: 468 SEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
SEKPN+ Y+ELMW+ELLRDF ++VVGEPVHL+GNSIGGYF++IVA LWPA+ KSV+LINS
Sbjct: 1549 SEKPNVFYSELMWAELLRDFIIQVVGEPVHLVGNSIGGYFISIVAGLWPALAKSVILINS 1608
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE 587
AGNVIP YS + S ER+ SG LGA+LLL +LRL + + VK CYP
Sbjct: 1609 AGNVIPXYSSVPSSKERRTSGAAWLGARLLLPFLRLRLPSIVKNCYPA------------ 1656
Query: 588 MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH 647
G+KDPISDS+SK+AM +EH
Sbjct: 1657 -----------------------------------------GVKDPISDSESKLAMLREH 1675
Query: 648 CAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKV 685
AGIVI+EL AGHCPHDE PEEVN II +WI TIESK+
Sbjct: 1676 FAGIVIKELSAGHCPHDELPEEVNYIICDWIATIESKL 1713
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115480339|ref|NP_001063763.1| Os09g0532700 [Oryza sativa Japonica Group] gi|52075945|dbj|BAD46025.1| deoxyribodipyrimidine photolyase family protein-like [Oryza sativa Japonica Group] gi|52077228|dbj|BAD46272.1| deoxyribodipyrimidine photolyase family protein-like [Oryza sativa Japonica Group] gi|113631996|dbj|BAF25677.1| Os09g0532700 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/643 (53%), Positives = 454/643 (70%), Gaps = 15/643 (2%)
Query: 50 WFKQDLRVDDHLGL---VAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLK 106
WFK DLRVDDH GL VAA + V+PLYVFD RIL YS+ MLEL++FALEDL+ LK
Sbjct: 49 WFKHDLRVDDHPGLAAAVAAEPRRPVLPLYVFDRRILDGYSDTMLELLLFALEDLKMVLK 108
Query: 107 EQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKP 166
Q SDL+I G E+V+ +LV EV+A +F EEEVEY +R ++A V+ +L+ S + G P
Sbjct: 109 SQESDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVEYRVRNVLASVESSLSNASFLSGNP 168
Query: 167 -KICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDEL 225
+I +W YD KN +L SHN+F K + P+ +P+ P+L +E + G LPT +EL
Sbjct: 169 PEIVVWSASLYDYKNPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIETGSLPTLEEL 228
Query: 226 KEFVNENPWKLEESWTLINNMSAETILTDKLS----KLGKRSKRNLNNQHSPR------K 275
K F+ E+ E +W + SA +IL LS K G S + + + +
Sbjct: 229 KGFLKESRTS-ENNWVPLKGTSARSILKKTLSQINVKTGVASSGSDGGEDTTAYYAMSGR 287
Query: 276 RLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFA 335
++ S F ++ V GGT L+AL AYL+YLEGT + WQEL +K+R E+RDGASF
Sbjct: 288 KIQNSMFTSESSTEVRGGTEITLDALAAYLKYLEGTGKASWQELHDKVRLTETRDGASFC 347
Query: 336 TLFGPALCLGIISRRGVHYEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMS 395
TLFGPAL LG+IS+R V++E I++E++RNAGF+SPFGYS T+ AA DA+CSMEWYWL++
Sbjct: 348 TLFGPALQLGVISKRRVYHETIQYERDRNAGFISPFGYSTPTVTAAVDAICSMEWYWLLA 407
Query: 396 LRSLRSNEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGN 455
L+S EG Y RIWRW G+ IQYT G EGP++LLVHGFGA L+H+RDNI IAD G
Sbjct: 408 LKSQVCIEGNYPVRIWRWKGHLIQYTSVGHEGPSVLLVHGFGASLQHFRDNIGAIADQGC 467
Query: 456 RVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW 515
+VWAITLLGFG+SEKPNI Y+EL+WSELLRDF V+VV EPVHL+GNSIGGY +I A LW
Sbjct: 468 QVWAITLLGFGKSEKPNINYSELLWSELLRDFIVDVVKEPVHLVGNSIGGYICSITASLW 527
Query: 516 PAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPT 575
P++ +S++L+N+AG+V+P YSF+ S E + S L A+LLL +LR +K+ YPT
Sbjct: 528 PSLARSLILLNTAGSVVPSYSFIPLSEEGRTSWLSSLQARLLLLFLRSRAGGILKEYYPT 587
Query: 576 RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPIS 635
R ER D L+ E++RASYDPG V+ESIFSF LS+PLN+L + F K+LI+QG+KDP++
Sbjct: 588 RTERVDKPLVDEIIRASYDPGAATVIESIFSFNLSIPLNFLFDSFGGKILIVQGMKDPLT 647
Query: 636 DSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
SKS V+M +EHC+ + IRELDAGH PHDE P+EVNS++ EWI
Sbjct: 648 KSKSFVSMLREHCSKVHIRELDAGHAPHDEVPDEVNSLLCEWI 690
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 691 | ||||||
| TAIR|locus:2122654 | 692 | AT4G25290 [Arabidopsis thalian | 0.969 | 0.968 | 0.587 | 6.4e-218 | |
| TAIR|locus:2115440 | 378 | AT4G36530 [Arabidopsis thalian | 0.390 | 0.714 | 0.335 | 1.4e-32 | |
| TAIR|locus:2832896 | 359 | AT5G19850 [Arabidopsis thalian | 0.397 | 0.766 | 0.342 | 7.5e-30 | |
| TAIR|locus:2159033 | 484 | PPH "AT5G13800" [Arabidopsis t | 0.312 | 0.446 | 0.286 | 1.5e-15 | |
| TAIR|locus:2159823 | 374 | AT5G38520 [Arabidopsis thalian | 0.360 | 0.665 | 0.283 | 4.1e-15 | |
| TAIR|locus:2061961 | 447 | PHR2 "photolyase/blue-light re | 0.228 | 0.353 | 0.314 | 4.1e-11 | |
| ZFIN|ZDB-GENE-040617-2 | 521 | cry-dash "cryptochrome DASH" [ | 0.256 | 0.339 | 0.272 | 6.8e-10 | |
| UNIPROTKB|O69638 | 327 | ephE "POSSIBLE EPOXIDE HYDROLA | 0.234 | 0.495 | 0.304 | 2.3e-09 | |
| UNIPROTKB|Q81K95 | 270 | menH "Hydrolase, alpha/beta fo | 0.373 | 0.955 | 0.240 | 4e-08 | |
| TIGR_CMR|BA_5110 | 270 | BA_5110 "hydrolase, alpha/beta | 0.373 | 0.955 | 0.240 | 4e-08 |
| TAIR|locus:2122654 AT4G25290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2105 (746.1 bits), Expect = 6.4e-218, P = 6.4e-218
Identities = 400/681 (58%), Positives = 509/681 (74%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
MA ++ P FL L N R++ +C CC+S +AT++G +AV+WFK DLRVDDH
Sbjct: 1 MAFLALPHFLHLRLRRNDRKN-----RCKCCLS---SATNEG--STAVVWFKHDLRVDDH 50
Query: 61 LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVE 120
GL+AASK++AV+PLYV D RILSRY+ + LEL I ALEDLRK+LK+QGS+LM+R+G E
Sbjct: 51 PGLLAASKHRAVIPLYVLDRRILSRYTTDTLELAIIALEDLRKTLKKQGSNLMLRYGNAE 110
Query: 121 NVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN 180
NVI +LV+EV+A VF EEEVEYHL +++ V L VSL P+I W+TPFY+ +N
Sbjct: 111 NVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAVKNKLEGVSLSGESPRIVAWRTPFYESQN 170
Query: 181 LNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESW 240
L DLP S EF+KL+ PLT P+ + E WG +PT D+LK+++ E+ W++E SW
Sbjct: 171 LTDLPQSWEEFKKLKLPLTLPVPAAKFSSPGSELQWGSVPTLDDLKDYLKESLWEIENSW 230
Query: 241 TLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNA 300
+ SAE +L ++L L + S + + S K++D S FVT K +TVGGG VLNA
Sbjct: 231 REMAQASAERVLMERLGNLKESSMEPIVDG-SLGKKVDNSVFVTSKRDTVGGGNEVVLNA 289
Query: 301 LQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE 360
L YLRYLEGT RDDWQE+ +LR+AE+R GASF LFGP LCLGI+SRR VHYEAI++E
Sbjct: 290 LAGYLRYLEGTSRDDWQEVHARLRDAETRPGASFFKLFGPVLCLGIVSRRSVHYEAIEYE 349
Query: 361 KERNAGFLSPFGYSXXXXXXXXXXVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQY 420
KERNAGF+SPFGYS VCSMEWY+L++L R +E ++ RIWRW GY IQY
Sbjct: 350 KERNAGFISPFGYSAATVSAATDAVCSMEWYYLLALSRERIDEKRHAIRIWRWKGYLIQY 409
Query: 421 TVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMW 480
TV G EGPA+LLVHGFGAFLEHYRDN+ +I + NRVW IT+LGFG+SEKPNI+YTEL+W
Sbjct: 410 TVVGNEGPAVLLVHGFGAFLEHYRDNVDNIVNSKNRVWTITVLGFGKSEKPNIIYTELLW 469
Query: 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQF 540
+ELLRDF EVVGEP H +GNSIGGYFVA++A LWPA+VKSVVL+NSAGNV+P YS L
Sbjct: 470 AELLRDFMAEVVGEPAHCVGNSIGGYFVALMAFLWPALVKSVVLVNSAGNVVPGYSPLPI 529
Query: 541 SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVV 600
S ER+ + G++LLLF+L+LN+ +K CYP + ERADD+L++EMLRAS DPGV++V
Sbjct: 530 SRERRVPFGAQFGSRLLLFFLQLNVKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMV 589
Query: 601 LESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGH 660
LESIF F LSLPLNYLL+GF+EK L+IQG++DPISD + KVA+ KE C +VI+++ AGH
Sbjct: 590 LESIFGFDLSLPLNYLLKGFEEKTLVIQGMEDPISDPQKKVALLKELCPAMVIKKVKAGH 649
Query: 661 CPHDEKPEEVNSIISEWIVTI 681
CPHDE EEVN II EWIV +
Sbjct: 650 CPHDEISEEVNPIICEWIVKV 670
|
|
| TAIR|locus:2115440 AT4G36530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 99/295 (33%), Positives = 158/295 (53%)
Query: 411 WRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
W W G++I Y V G EG ++L+HGFGA + H+R NI ++A +V+A+ LLGFG S+K
Sbjct: 84 WEWRGHKIHYVVQG-EGSPLVLIHGFGASVFHWRYNIPELAKK-YKVYALDLLGFGWSDK 141
Query: 471 PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
I Y ++W++ + DF EVV EP ++GNS+GG+ VA P V V L+NSAG
Sbjct: 142 ALIEYDAMVWTDQVIDFMKEVVKEPAVVVGNSLGGFTALSVAVGLPEQVTGVALLNSAGQ 201
Query: 531 VIPEYSFLQFSNERQASG----PIR-LGAQLLLFYL------RLNISNFVKQCYPTRRER 579
E + ++E + P++ + +++L +L I + +K Y
Sbjct: 202 FAAESRKREEADETVITKFIVKPLKEIFQRVVLGFLFWQAKQPSRIESVLKSVY-IDSTN 260
Query: 580 ADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKV----LIIQGIKDP-I 634
DD+L+ + + + DP V + + L+ Y L+ K+ L++ G DP +
Sbjct: 261 VDDYLVESISKPATDPNAGEVYYRLMTRFLTNQSRYTLDSVLSKMTCPLLLVWGDLDPWV 320
Query: 635 SDSKS-KVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI-VTIESKVPA 687
+K+ K+ F + + +V L AGHCPHDE PE VN + +W+ + I SK PA
Sbjct: 321 GPAKAEKIKAFYSN-SSLV--HLQAGHCPHDEVPEAVNKALLDWLSINIASK-PA 371
|
|
| TAIR|locus:2832896 AT5G19850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 7.5e-30, P = 7.5e-30
Identities = 100/292 (34%), Positives = 142/292 (48%)
Query: 401 SNEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAI 460
S E T W+W GY I+Y AG GPA++LVHGFGA +H+R N I +RV++I
Sbjct: 68 SEELQVRTLTWKWKGYSIRYQCAGTSGPALVLVHGFGANSDHWRKNT-PILGKTHRVYSI 126
Query: 461 TLLGFGRSEKPNI-------VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513
L+G+G S+KPN YT W E L DF ++VV + I NSIGG A
Sbjct: 127 DLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNSIGGLVGLQAAV 186
Query: 514 LWPAVVKSVVLINSAGNV--IPEYSFLQFSNERQASGPIRLGAQLLLFYLRL----NISN 567
P + + ++LIN + + I + F+ + +R LF+ + + +
Sbjct: 187 SKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFFKSIAKPETVKS 246
Query: 568 FVKQCYPTRRERADDWLISEMLRASYDPGVL-VVLESIFSFKLSLPLNYLLEGFKEKVLI 626
+ QCY + D+ L+ +LR +PG + V LE I LP + LL K VLI
Sbjct: 247 ILCQCYHDSSQVTDE-LVEAILRPGLEPGAVDVFLEFICYSGGPLPED-LLPLVKCPVLI 304
Query: 627 IQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
G KDP + A + DAGHCP DEKPE VN +I ++
Sbjct: 305 AWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESFV 356
|
|
| TAIR|locus:2159033 PPH "AT5G13800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 69/241 (28%), Positives = 110/241 (45%)
Query: 464 GFGRSEKP---NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVK 520
GFG +P +V++ +W + ++ F EV+GEPV++ GNS+GGY A P +VK
Sbjct: 180 GFGDKTEPWADQLVFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVK 239
Query: 521 SVVLINSA---G---NVI--PEYSFLQFSNERQASGPIRLGAQLLLFYLRLN----ISNF 568
V L+N+ G N + P+ + L F P R+ L + +++ I+
Sbjct: 240 GVTLLNATPFWGFFPNPVRSPKLARL-FPWPGAFPLPERVKKITELVWQKISDPESIAEI 298
Query: 569 VKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLS-LPLNYLLEGFKE---KV 624
+KQ Y D + S ++ + P SI L + L KE ++
Sbjct: 299 LKQVYTDHSINVDK-VFSRIVEVTQHPAAAASFASIMLAPGGELSFSEALSRCKENNVQI 357
Query: 625 LIIQGIKDP-ISDSKSKVAMFKEHCAGIVIRELD-AGHCPHDEKPEEVNSIISEWIVTIE 682
++ G +DP + K K+ E+ AGHCPHDE PE VN ++ WI +E
Sbjct: 358 CLMYGREDPWVRPLWGK--KIKKEIPNAPYYEISPAGHCPHDEVPEVVNYLMRGWIKHLE 415
Query: 683 S 683
S
Sbjct: 416 S 416
|
|
| TAIR|locus:2159823 AT5G38520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 219 (82.2 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 81/286 (28%), Positives = 132/286 (46%)
Query: 430 ILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIVYTELMWSELLRDFT 488
+LLVHGFGA + H+R NI ++ + V+AI LLGFG S+KP YT W+EL+ +F
Sbjct: 93 VLLVHGFGASIPHWRRNINALSKN-HTVYAIDLLGFGASDKPPGFSYTMESWAELILNFL 151
Query: 489 VEVVGEPVHLIGNSIGGYFVAIVAC-----LWPA--------VVKSVVLINSAGNVIPEY 535
EVV +P LIGNS+G I A ++ +VK +VL+N AG + +
Sbjct: 152 EEVVQKPTILIGNSVGSLACVIAASGTKFLIYLEKKTESRGDLVKGLVLLNCAGGMNNKA 211
Query: 536 SFLQFSNERQASGPIRLGAQLLL--------FYLRL----NISNFVKQCYPTRRERADDW 583
F + + P+ L LL + R+ N+ N + Y + + DD
Sbjct: 212 VFDDWRIKLLM--PLLLLIDFLLKQRGIASALFNRVKDRENLKNILTNVYGNK-DNVDDT 268
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSL-PLNYLLEGFKEKVLIIQGIKDPISDSKSKVA 642
L+ + + G L SI + P+ + E + VL++ G +D ++ V
Sbjct: 269 LVEIIAGPANTEGALDAFVSILTGPPGPNPIKLIPE-ITKPVLVLWGDQDGLTPLDGPVG 327
Query: 643 MF----KEHCAGIVIRELDA-GHCPHDEKPEEVNSIISEWIVTIES 683
+ + + L GHCP D++P+ V+ + W+ + S
Sbjct: 328 KYFTSLPDQLPNFNLYVLQGVGHCPQDDRPDLVHERLLPWLAQLSS 373
|
|
| TAIR|locus:2061961 PHR2 "photolyase/blue-light receptor 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 185 (70.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 56/178 (31%), Positives = 100/178 (56%)
Query: 32 VSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEM 90
V P++AA + +AV+WF+ DLRV D+ L +A+ + +V+P+Y FD R + S+
Sbjct: 105 VDPSSAAALRR---AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGF 161
Query: 91 -------LELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEY 143
+ +I ++ +LRK+L+ +GS+L++R G+ E V+ EL +E+ A +V+A EV +
Sbjct: 162 DKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSH 221
Query: 144 HLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR-KLQR 196
+ + ET K V+ K W + Y + +L DLP ++ F+ K+Q+
Sbjct: 222 DEVKAEGKI-ETAMKEEGVEVK---YFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQK 275
|
|
| ZFIN|ZDB-GENE-040617-2 cry-dash "cryptochrome DASH" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 150 (57.9 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 55/202 (27%), Positives = 97/202 (48%)
Query: 44 SGSAVIWFKQDLRV-DDHLGLVAASKYQAVVPLYVFDHR-ILSRYSNEM-------LELV 94
S + + + DLR+ D+ + A + ++PLY FD R Y L +
Sbjct: 5 SRTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFL 64
Query: 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFA-EEEVEYHLRQMMAIVD 153
+ +++DLR LK+ GS L++R G+ E+V+ EL++++ + S A EEV + V+
Sbjct: 65 LDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKS----VE 120
Query: 154 ETLAKVSLVDGKPKI-CLWQTPFY---DI--KNLNDLPVSHNEFRKL--QRPLTSPIL-- 203
E L ++ K ++ W + Y D+ ++ LP + +FRK + P+L
Sbjct: 121 EKLKEICC-QNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLST 179
Query: 204 PPTLAGAKLEADWGPLPTFDEL 225
P + + GP+PTFD L
Sbjct: 180 PEQVKSPPSGLEEGPIPTFDSL 201
|
|
| UNIPROTKB|O69638 ephE "POSSIBLE EPOXIDE HYDROLASE EPHE (EPOXIDE HYDRATASE) (ARENE-OXIDE HYDRATASE)" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 142 (55.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 52/171 (30%), Positives = 79/171 (46%)
Query: 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF 487
P ++L+HGFG+F +R + + G RV A+ L G+G S+KP Y W+ L D
Sbjct: 55 PLVILLHGFGSFWWSWRHQLCGLT--GARVVAVDLRGYGGSDKPPRGYDG--WT-LAGDT 109
Query: 488 T--VEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNER 544
+ +G P L+G++ GG A L +V+++ LI+S S L ++R
Sbjct: 110 AGLIRALGHPSATLVGHADGGLACWTTALLHSRLVRAIALISSPHPAALRRSTLTRRDQR 169
Query: 545 QASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERA-DDWLISEMLRASYD 594
A P L QL ++ RL N + R R WL SE + D
Sbjct: 170 HALLPTLLRYQLPIWPERLLTRNNAAEIERLVRARGCAKWLASEDFSQAID 220
|
|
| UNIPROTKB|Q81K95 menH "Hydrolase, alpha/beta fold family" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 66/274 (24%), Positives = 128/274 (46%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NI 473
G +Y V G G +LL+HGF +E +R + ++ +V + ++G G++E P ++
Sbjct: 7 GVSYEYEVVGS-GEPLLLLHGFTGSMETWRSFVPSWSEQF-QVILVDIVGHGKTESPEDV 64
Query: 474 VYTELMWSEL-LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532
+ ++ + L +++ + E H++G S+GG +ACL+P V+S++L N +
Sbjct: 65 THYDIRNAALQMKELLDYLHIEKAHILGYSMGGRLAITMACLYPEYVRSLLLENCTAGLE 124
Query: 533 PEYSFLQF--SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLR 590
E + +ER A R G + + NI F Q + + + + E L
Sbjct: 125 REDERKERCEKDERLADKIEREGIESFVTMWE-NIPLFETQ--KSLAQNVQEAVRKERL- 180
Query: 591 ASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650
A+ G+ L + + N L + K VL++ G D + ++ E C
Sbjct: 181 ANNSNGLANSLRGMGTGAQPSWWNEL-QNLKMSVLLMNGEYD---EKFFRILKNIEKCVS 236
Query: 651 IV-IRELD-AGHCPHDEKPEEVNSIISEWIVTIE 682
++D AGH H E+PE+ ++I+ ++ T++
Sbjct: 237 DAKFVKIDGAGHAIHVEQPEKFDTIVKGFLKTMQ 270
|
|
| TIGR_CMR|BA_5110 BA_5110 "hydrolase, alpha/beta fold family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 66/274 (24%), Positives = 128/274 (46%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NI 473
G +Y V G G +LL+HGF +E +R + ++ +V + ++G G++E P ++
Sbjct: 7 GVSYEYEVVGS-GEPLLLLHGFTGSMETWRSFVPSWSEQF-QVILVDIVGHGKTESPEDV 64
Query: 474 VYTELMWSEL-LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532
+ ++ + L +++ + E H++G S+GG +ACL+P V+S++L N +
Sbjct: 65 THYDIRNAALQMKELLDYLHIEKAHILGYSMGGRLAITMACLYPEYVRSLLLENCTAGLE 124
Query: 533 PEYSFLQF--SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLR 590
E + +ER A R G + + NI F Q + + + + E L
Sbjct: 125 REDERKERCEKDERLADKIEREGIESFVTMWE-NIPLFETQ--KSLAQNVQEAVRKERL- 180
Query: 591 ASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650
A+ G+ L + + N L + K VL++ G D + ++ E C
Sbjct: 181 ANNSNGLANSLRGMGTGAQPSWWNEL-QNLKMSVLLMNGEYD---EKFFRILKNIEKCVS 236
Query: 651 IV-IRELD-AGHCPHDEKPEEVNSIISEWIVTIE 682
++D AGH H E+PE+ ++I+ ++ T++
Sbjct: 237 DAKFVKIDGAGHAIHVEQPEKFDTIVKGFLKTMQ 270
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 691 | |||
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 2e-44 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 3e-40 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 1e-30 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 6e-24 | |
| TIGR02765 | 429 | TIGR02765, crypto_DASH, cryptochrome, DASH family | 3e-23 | |
| pfam00875 | 164 | pfam00875, DNA_photolyase, DNA photolyase | 2e-20 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-20 | |
| COG0415 | 461 | COG0415, PhrB, Deoxyribodipyrimidine photolyase [D | 7e-16 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 9e-14 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 1e-13 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 1e-13 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-08 | |
| TIGR03556 | 471 | TIGR03556, photolyase_8HDF, deoxyribodipyrimidine | 5e-07 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 2e-06 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 7e-06 | |
| TIGR02766 | 475 | TIGR02766, crypt_chrom_pln, cryptochrome, plant fa | 3e-05 | |
| PLN03087 | 481 | PLN03087, PLN03087, BODYGUARD 1 domain containing | 1e-04 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 8e-04 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 0.004 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 0.004 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 2e-44
Identities = 101/295 (34%), Positives = 144/295 (48%), Gaps = 40/295 (13%)
Query: 411 WRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
W W G++I Y V G EG I+L+HGFGA H+R NI ++A +V+A+ LLGFG S+K
Sbjct: 71 WTWRGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDK 128
Query: 471 PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
I Y ++W + + DF EVV EP L+GNS+GG+ A +P +V V L+NSAG
Sbjct: 129 ALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG- 187
Query: 531 VIPEYSFLQFSNE----------------RQASGPIRLGAQ-LLLFYL------RLNISN 567
QF +E R P++ Q ++L +L I +
Sbjct: 188 --------QFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIES 239
Query: 568 FVKQCYPTRRERADDWLISEMLRASYDPG---VLVVLESIFSFKLS-LPLNYLLEGFKEK 623
+K Y + DD+L+ + + DP V L S F F S L+ LL
Sbjct: 240 VLKSVY-KDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298
Query: 624 VLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+L++ G DP +K K + L AGHCPHDE PE+VN + EW+
Sbjct: 299 LLLLWGDLDPWVGP-AKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWL 352
|
Length = 354 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 149 bits (377), Expect = 3e-40
Identities = 104/292 (35%), Positives = 133/292 (45%), Gaps = 29/292 (9%)
Query: 407 STRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG 466
TR WRW GY I+Y AG GPA++LVHGFG +H+R N +A RV+AI LLG+G
Sbjct: 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSH-RVYAIDLLGYG 67
Query: 467 RSEKP-------NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVV 519
S+KP N YT W E L DF +VVG+P +I NS+GG A P +V
Sbjct: 68 YSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELV 127
Query: 520 KSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLL--------FYLRL----NISN 567
+ V+LIN L + P Q LL F+ + + N
Sbjct: 128 RGVMLIN------ISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKN 181
Query: 568 FVKQCYPTRRERADDWLISEMLRASYDPG-VLVVLESIFSFKLSLPLNYLLEGFKEKVLI 626
+ QCY D L+ +LR +PG V V L+ I LP LL K VLI
Sbjct: 182 ILCQCY-HDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLP-EELLPAVKCPVLI 239
Query: 627 IQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
G KDP + A I GHCP DE PE VN +I ++
Sbjct: 240 AWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFV 291
|
Length = 294 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 96/327 (29%), Positives = 143/327 (43%), Gaps = 60/327 (18%)
Query: 395 SLRSLRSNEGVYSTRIWRWNG-YQIQYTVAG-----KEGPAILLVHGFGAFLEHYRDNIY 448
L + + W+W G Y I Y V G GP +LLVHGFGA + H+R NI
Sbjct: 55 ELEEIYE-----RCKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIG 109
Query: 449 DIADGGNRVWAITLLGFGRSEKP-NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507
+A V+AI LLGFG S+KP YT W+EL+ DF EVV +P LIGNS+G
Sbjct: 110 VLAKN-YTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGS-- 166
Query: 508 VAIVACLWPA------VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561
+AC+ A +V+ +VL+N AG + N + R+ L L +L
Sbjct: 167 ---LACVIAASESTRDLVRGLVLLNCAGGM----------NNKAVVDDWRIKLLLPLLWL 213
Query: 562 --------------------RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVL 601
R N+ N + Y +E DD L+ + + D G L
Sbjct: 214 IDFLLKQRGIASALFNRVKQRDNLKNILLSVY-GNKEAVDDELVEIIRGPADDEGALDAF 272
Query: 602 ESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMF----KEHCAGIVIRELD 657
SI + L+ +L++ G +DP + V + + + L+
Sbjct: 273 VSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLE 332
Query: 658 A-GHCPHDEKPEEVNSIISEWIVTIES 683
GHCPHD++P+ V+ + W+ + S
Sbjct: 333 GVGHCPHDDRPDLVHEKLLPWLAQLPS 359
|
Length = 360 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 102 bits (253), Expect = 6e-24
Identities = 62/274 (22%), Positives = 103/274 (37%), Gaps = 11/274 (4%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIAD--GGNRVWAITLLGFGRSEKP 471
+G ++ Y AG GP ++L+HGF +R + RV A L G GRS+
Sbjct: 8 DGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPA 67
Query: 472 NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA--- 528
Y+ +++ L + E V L+G+S+GG +A P V+ +VLI A
Sbjct: 68 G--YSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPP 125
Query: 529 GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM 588
G + + A + LG F L + R + L + +
Sbjct: 126 GLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPL 185
Query: 589 LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEK---VLIIQGIKDPISDSKSKVAMFK 645
L A+ + + L+L L LII G DP+ ++ +
Sbjct: 186 LGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAA 245
Query: 646 EHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + AGH PH E PE + + ++
Sbjct: 246 ALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFL 279
|
Length = 282 |
| >gnl|CDD|234002 TIGR02765, crypto_DASH, cryptochrome, DASH family | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-23
Identities = 86/339 (25%), Positives = 140/339 (41%), Gaps = 90/339 (26%)
Query: 48 VIWFKQDLRVDDHLGLV-AASKYQAVVPLYVFDHRI--LSRYSNEM------LELVIFAL 98
+ WF+ DLRV D+ L A+S ++PLY FD R L+ + + ++ +L
Sbjct: 4 LYWFRNDLRVHDNPALYKASSSSDTLIPLYCFDPRQFKLTHFFGFPKTGPARGKFLLESL 63
Query: 99 EDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK 158
+DLR SL++ GSDL++R G+ E+V+ EL++E+ +VF +EV + + ++ + LA+
Sbjct: 64 KDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVRTVFLHQEVGSEEKSVERLLQQALAR 123
Query: 159 VSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEA 214
+ + + W + Y +L DLP +FRK S I PP A KL
Sbjct: 124 LGIHVEQ----HWGSTLYHEDDLPFDLEDLPDVFTQFRKQVEAKCS-IRPPLPAPEKLPP 178
Query: 215 -----DWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNN 269
D G +PT + + E+
Sbjct: 179 LPSVDDPGWIPTLE---DLGEESS------------------------------------ 199
Query: 270 QHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESR 329
D+G GG A L L+ Y W + + + E+R
Sbjct: 200 -------------EVDRGLPFVGGETAGLARLKEYF----------WSKDLKSYK--ETR 234
Query: 330 ---DGASFATLFGPALCLGIISRRGVHYEAIKFEKERNA 365
G ++T F P L LG +S R ++ E ++E ER A
Sbjct: 235 NGMLGPDYSTKFSPWLALGCVSPRQIYEELQRYETERGA 273
|
Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes [Cellular processes, Adaptations to atypical conditions, Regulatory functions, DNA interactions]. Length = 429 |
| >gnl|CDD|216167 pfam00875, DNA_photolyase, DNA photolyase | Back alignment and domain information |
|---|
Score = 88.0 bits (219), Expect = 2e-20
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 47 AVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRYSNE------MLELVIFALE 99
++WF++DLR+ D+ L AA++ V+P+++ D L + +LE +L
Sbjct: 1 VLVWFRRDLRLHDNPALAAAAESGAPVIPVFILDPAQLGSHKLGAARRWFLLE----SLA 56
Query: 100 DLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK 158
DL +SL + G L++R G V+ EL +E+ A++V+ + E + RQ A V E L +
Sbjct: 57 DLDESLAKLGIRLVVRRGDPAEVLPELAKELGASAVYWNRDYEPYERQRDAAVKEALRE 115
|
This domain binds a light harvesting cofactor. Length = 164 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 3e-20
Identities = 57/246 (23%), Positives = 80/246 (32%), Gaps = 61/246 (24%)
Query: 430 ILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTEL-MWSELLRDFT 488
++L+HG G E +R +A G RV A L G G S+ P L + L
Sbjct: 1 VVLLHGAGGSAESWRPLAEALAAGY-RVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALL 59
Query: 489 VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASG 548
+ PV L+G+S+GG A P V +VLI+ + E
Sbjct: 60 DALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEEL------------- 106
Query: 549 PIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFK 608
++ R D + E L +
Sbjct: 107 ----------------LAADAAALLALLRAALLDADLREALA-----------------R 133
Query: 609 LSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKP 667
L++P VL+I G DP+ E G + L AGH PH E P
Sbjct: 134 LTVP-----------VLVIHGEDDPLV-PPEAARRLAEALPGAELVVLPGAGHLPHLEHP 181
Query: 668 EEVNSI 673
EEV
Sbjct: 182 EEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223492 COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 7e-16
Identities = 72/331 (21%), Positives = 115/331 (34%), Gaps = 86/331 (25%)
Query: 48 VIWFKQDLRVDDHLGLVAA--SKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSL 105
++WF++DLR+ D+ L AA S ++ +++ D L S ++ +L+ L++SL
Sbjct: 5 LVWFRRDLRLTDNAALAAACQSGQPVIIAVFILDPEQLGHASPRHAAFLLQSLQALQQSL 64
Query: 106 KEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKV-----S 160
E G L++R G E V+ EL +++ AT+VF + E RQ D LA+
Sbjct: 65 AELGIPLLVREGDPEQVLPELAKQLAATTVFWNRDYEEWERQ----RDAALAQPLTEVGI 120
Query: 161 LVDGKPKICL---WQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWG 217
V L + + F K R IL P A L+A
Sbjct: 121 AVHSFWDALLHEPGEVRT----GSGEPYKVFTPFYKAWRDRL-RILRPVPAPDVLDAL-- 173
Query: 218 PLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRL 277
+ E +L + + +L
Sbjct: 174 -------------RDEEPPPEEISLPDFSKFDVLLFT----------------------- 197
Query: 278 DKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQ--EKLRNAESRDGASFA 335
GG A L LQ +L + L E+ R+ + DG S
Sbjct: 198 --------------GGEKAALARLQDFL----------AEGLDDYERTRDFPALDGTSR- 232
Query: 336 TLFGPALCLGIISRRGVHYEAIKFEKERNAG 366
P L G+IS R V+ + E + G
Sbjct: 233 --LSPYLAFGVISPREVYAALLAAESDAREG 261
|
Length = 461 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 9e-14
Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 71/290 (24%)
Query: 418 IQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYT 476
++Y G+ G ++L+HGFG L ++ N +A G V A+ L G G S K +
Sbjct: 121 VRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSK-AVGAG 178
Query: 477 ELMWSELLRDF---TVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532
L + L ++ +G E HL+G+S+GG +A P V S+ LI AG
Sbjct: 179 SL---DELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG--- 232
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRER--------ADDWL 584
LG ++ Y I FV +RRE AD L
Sbjct: 233 -------------------LGPEINGDY----IDGFVAA--ESRRELKPVLELLFADPAL 267
Query: 585 ISE-----MLRASYDPGVLVVLESIFSFKL------SLPLNYLLEGFKEKVLIIQGIKD- 632
++ +L+ GV L ++ + L + L L VL+I G +D
Sbjct: 268 VTRQMVEDLLKYKRLDGVDDALRAL-ADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDR 326
Query: 633 --PISDSKSKVAMFKEHCAGIVIREL--DAGHCPHDEKPEEVNSIISEWI 678
P + + + V + AGH P E +VN +++E++
Sbjct: 327 IIPAAHA--------QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368
|
Length = 371 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 1e-13
Identities = 55/231 (23%), Positives = 86/231 (37%), Gaps = 20/231 (8%)
Query: 456 RVWAITLLGFGRSEKP--NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513
V A L GFGRS P Y +E L + + V+L+G+S+GG A
Sbjct: 2 DVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYAA 61
Query: 514 LWPAVVKSVVLINSAGNVI---PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK 570
+P VK++VL+ + P + RL + +K
Sbjct: 62 KYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALL-----GRAIK 116
Query: 571 QCYPTRRERADD----WLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLI 626
Q R D + +S ++R + +L + L + L+ LI
Sbjct: 117 QFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLI 176
Query: 627 IQGIKDPI---SDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSII 674
I G DP+ S+ A+F ++ DAGH EKP+EV +I
Sbjct: 177 IWGDDDPLVPPDASEKLAALFPNAQLVVI---DDAGHLAQLEKPDEVAELI 224
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 59/268 (22%), Positives = 99/268 (36%), Gaps = 30/268 (11%)
Query: 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488
++LVHG G Y + D+A G V+A+ L G GRS + + + +++ + D
Sbjct: 36 VVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD-SFADYVDDLD 94
Query: 489 --VEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFS 541
VE + G PV L+G+S+GG + +P + +VL + L
Sbjct: 95 AFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSS---------PALGLG 145
Query: 542 NERQASGPIRLGAQLLL-----FYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPG 596
RL +LL + N+ V +R ++ L P
Sbjct: 146 GAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPV 205
Query: 597 VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL 656
V ++ + + +P VL++QG D + D+ +A F E
Sbjct: 206 SRWVDLALLAGR--VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELK 263
Query: 657 ---DAGHCPHDEKP---EEVNSIISEWI 678
A H +E EEV I W+
Sbjct: 264 VIPGAYHELLNEPDRAREEVLKDILAWL 291
|
Length = 298 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488
++L+HG G E Y +A G V A+ G G S +L D
Sbjct: 1 LVVLLHGAGGDPEAYAPLARALASRGYNVVAVDYPGHGASLGAP------DAEAVLADAP 54
Query: 489 VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
++ E + L+G+S+GG ++A P V +VVL
Sbjct: 55 LDP--ERIVLVGHSLGGGVALLLAARDPRVKAAVVLA 89
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|132595 TIGR03556, photolyase_8HDF, deoxyribodipyrimidine photo-lyase, 8-HDF type | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 50 WFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLK 106
W ++DLR+ D++GL AA + VV L+ D IL + + +I L++L++ +
Sbjct: 6 WHRRDLRLSDNIGLAAARQQSAKVVGLFCLDPNILQADDMAPARVAYLIGCLQELQQRYQ 65
Query: 107 EQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETL 156
+ GS L+I G +I +L +++ A +V+ +VE + R+ V L
Sbjct: 66 QAGSQLLILQGDPVQLIPQLAQQLGAKAVYWNLDVEPYGRKRDRAVAAAL 115
|
This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420 [DNA metabolism, DNA replication, recombination, and repair]. Length = 471 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 425 KEGPAILLVHG--FGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP 471
+GP +LL+HG ++L YR I +A G+RV A L+GFGRS+KP
Sbjct: 44 ADGPPVLLLHGEPSWSYL--YRKMIPILAAAGHRVIAPDLIGFGRSDKP 90
|
Length = 302 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 406 YSTRIWRWNGYQIQYTVAGKEGPAI--LLVHGFGAFLEH-YRDNIYDIADGGNR-VWAIT 461
I +G +T G EG I LL+HG G + H Y +N+ ++ R V
Sbjct: 2 QIEGIITVDGGYHLFTKTGGEGEKIKLLLLHG-GPGMSHEYLENLRELLKEEGREVIMYD 60
Query: 462 LLGFGRSEKPNIVYTELMWSELLRDFTVEVV--------GEPVHLIGNSIGGYFVAIVAC 513
LG G S++P+ E +W+ D+ V+ + + +L+G+S GG A
Sbjct: 61 QLGCGYSDQPDD-SDEELWT---IDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYAL 116
Query: 514 LWPAVVKSVVLINSAGNVIPEYS 536
+ +K +++ + + PEY
Sbjct: 117 KYGQHLKGLIISSMLDS-APEYV 138
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|131813 TIGR02766, crypt_chrom_pln, cryptochrome, plant family | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 3e-05
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVF-----DHRILSRYSNEMLELVIFALEDLR 102
++WF++DLRV+D+ L AA++ V+P++V+ R S L+ +L L
Sbjct: 1 IVWFRRDLRVEDNPALAAAARAGPVIPVFVWAPEEEGQYYPGRVSRWWLKQ---SLAHLD 57
Query: 103 KSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLV 162
+SL+ G+ L+ R + + L++ V++T A HL +++V + AK L
Sbjct: 58 QSLRSLGTCLVTI--RSTDTVAALLDCVRSTG--ATRLFFNHLYDPVSLVRDHRAKEVLT 113
|
At least five major families of cryptochomes and photolyases share FAD cofactor binding, sequence homology, and the ability to react to short wavelengths of visible light. Photolysases are responsible for light-dependent DNA repair by removal of two types of uv-induced DNA dimerizations. Cryptochromes have other functions, often regulatory and often largely unknown, which may include circadian clock entrainment and control of development. Members of this subfamily are known so far only in plants; they may show some photolyase activity in vitro but appear mostly to be regulatory proteins that respond to blue light. Length = 475 |
| >gnl|CDD|215567 PLN03087, PLN03087, BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 430 ILLVHGF---GAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYT-----ELM 479
+L +HGF AF E N D A R++A+ LLGFGRS KP +YT E++
Sbjct: 204 VLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMI 263
Query: 480 WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
+L + V + H++ +S+G +A P VKS+ L+
Sbjct: 264 ERSVLERYKV----KSFHIVAHSLGCILALALAVKHPGAVKSLTLL 305
|
Length = 481 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 421 TVAGKEG-PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIV----- 474
T KE P +++VHG+GA + N +D RV AI LG+G S +P+
Sbjct: 98 TFDSKEDAPTLVMVHGYGASQGFFFRN-FDALASRFRVIAIDQLGWGGSSRPDFTCKSTE 156
Query: 475 YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
TE + + ++ L+G+S GGY A A P V+ ++L+ AG
Sbjct: 157 ETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211
|
Length = 402 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 416 YQIQYTVAGKEGPAILLVHGFG----AFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP 471
++I Y AG G A++++HG G + +YR NI D G RV GF +S+
Sbjct: 20 FRIHYNEAG-NGEAVIMLHGGGPGAGGWSNYYR-NIGPFVDAGYRVILKDSPGFNKSDA- 76
Query: 472 NIVYTE---LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
+V E L+ + ++ + E HL+GNS+GG A +P + ++L+
Sbjct: 77 -VVMDEQRGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135
Query: 529 G 529
G
Sbjct: 136 G 136
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITL--LGFGRSEKPNIVYTELMWSEL 483
GP +LL+HG GA +RD + +A RV A L GF R+ M +L
Sbjct: 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85
Query: 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
E + P +IG+S G +A P + VV IN+A
Sbjct: 86 SALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAA 129
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 691 | |||
| TIGR02765 | 429 | crypto_DASH cryptochrome, DASH family. Photolyases | 100.0 | |
| COG0415 | 461 | PhrB Deoxyribodipyrimidine photolyase [DNA replica | 100.0 | |
| TIGR03556 | 471 | photolyase_8HDF deoxyribodipyrimidine photo-lyase, | 100.0 | |
| TIGR02766 | 475 | crypt_chrom_pln cryptochrome, plant family. At lea | 100.0 | |
| PRK10674 | 472 | deoxyribodipyrimidine photolyase; Provisional | 100.0 | |
| TIGR00591 | 454 | phr2 photolyase PhrII. All proteins in this family | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PF00875 | 165 | DNA_photolyase: DNA photolyase from Prosite.; Inte | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.97 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.97 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.97 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.97 | |
| PLN02578 | 354 | hydrolase | 99.97 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.96 | |
| KOG0133 | 531 | consensus Deoxyribodipyrimidine photolyase/cryptoc | 99.96 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.96 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.96 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.96 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.95 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.95 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.95 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.95 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.95 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.94 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.94 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.94 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.94 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.94 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.94 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.94 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.94 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.94 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.93 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.93 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.93 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.93 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.93 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.93 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.93 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.93 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.92 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.92 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.91 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.9 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.9 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.9 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.9 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.9 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.89 | |
| PLN02511 | 388 | hydrolase | 99.88 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.88 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.87 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.86 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.84 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.84 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.82 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.82 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.81 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.8 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.8 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.77 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.76 | |
| PRK10566 | 249 | esterase; Provisional | 99.75 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.75 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.74 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.74 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.7 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.7 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.7 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.67 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.65 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.64 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.63 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.62 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.62 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.6 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.56 | |
| PLN00021 | 313 | chlorophyllase | 99.56 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.55 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.55 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.51 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.51 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.51 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.51 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.48 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.46 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.42 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.42 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.4 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.38 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.38 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.36 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.35 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.35 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.34 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.32 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.31 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.3 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.3 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.28 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.24 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.24 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.23 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.21 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.18 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.14 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.13 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.11 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.11 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.11 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.04 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.01 | |
| PRK10115 | 686 | protease 2; Provisional | 99.0 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.99 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.98 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.96 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.95 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.95 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.94 | |
| PF03441 | 277 | FAD_binding_7: FAD binding domain of DNA photolyas | 98.94 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.93 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.84 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.84 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.8 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.78 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.75 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.74 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.71 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.69 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.66 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.64 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.63 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.6 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.59 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.57 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.53 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.5 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.46 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.44 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.43 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.41 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.4 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.4 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.39 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.39 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.39 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.35 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.32 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.27 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.25 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.19 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.17 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.17 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.15 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.07 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.07 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.05 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.01 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.99 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.92 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 97.89 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.89 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.88 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.87 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.85 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.81 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.81 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.78 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.56 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.55 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.54 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.52 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.49 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.47 | |
| COG3046 | 505 | Uncharacterized protein related to deoxyribodipyri | 97.44 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.42 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.4 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.34 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.32 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.31 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.21 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.13 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.12 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.05 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.92 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 96.9 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 96.83 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 96.77 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.75 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.73 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.65 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.63 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.52 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.29 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 96.21 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 96.09 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 96.02 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 95.94 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.93 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 95.87 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.82 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 95.81 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 95.72 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 95.62 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.58 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 95.55 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.37 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.13 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.09 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.63 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 94.02 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 93.68 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 93.62 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 93.28 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.26 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.23 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 93.19 | |
| PF04244 | 224 | DPRP: Deoxyribodipyrimidine photo-lyase-related pr | 92.98 | |
| PLN02162 | 475 | triacylglycerol lipase | 92.61 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 92.44 | |
| PLN00413 | 479 | triacylglycerol lipase | 92.26 | |
| PLN02454 | 414 | triacylglycerol lipase | 91.14 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 91.12 | |
| PLN02571 | 413 | triacylglycerol lipase | 90.97 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 90.3 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 90.1 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 89.84 | |
| PLN02408 | 365 | phospholipase A1 | 89.52 | |
| PLN02934 | 515 | triacylglycerol lipase | 88.24 | |
| PLN02310 | 405 | triacylglycerol lipase | 87.96 | |
| PLN02324 | 415 | triacylglycerol lipase | 87.68 | |
| PRK12652 | 357 | putative monovalent cation/H+ antiporter subunit E | 87.32 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 87.06 | |
| PLN02802 | 509 | triacylglycerol lipase | 86.53 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 86.39 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 86.14 | |
| PLN02753 | 531 | triacylglycerol lipase | 85.34 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 85.05 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 84.72 | |
| PLN02761 | 527 | lipase class 3 family protein | 84.41 | |
| PLN02719 | 518 | triacylglycerol lipase | 84.07 | |
| TIGR00591 | 454 | phr2 photolyase PhrII. All proteins in this family | 84.06 | |
| COG0415 | 461 | PhrB Deoxyribodipyrimidine photolyase [DNA replica | 84.04 | |
| TIGR00289 | 222 | conserved hypothetical protein TIGR00289. Homologo | 81.23 | |
| PLN02847 | 633 | triacylglycerol lipase | 81.0 |
| >TIGR02765 crypto_DASH cryptochrome, DASH family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=369.97 Aligned_cols=251 Identities=31% Similarity=0.534 Sum_probs=198.3
Q ss_pred cEEEEEcCCCCCcCCHHHHHHHhC-CCeEEEEEECCccccc--------CChhHHHHHHHHHHHHHHHHHhcCCcEEEEE
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--------YSNEMLELVIFALEDLRKSLKEQGSDLMIRF 116 (691)
Q Consensus 46 ~~l~W~r~dlRl~DN~aL~~A~~~-~~~~~~f~~~~~~~~~--------~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~ 116 (691)
.+|||||||||++||+||.+|++. .+|+||||+||+++.. .+++|++||++||.+|+++|+++|++|+++.
T Consensus 2 ~~l~WfRrDLRl~DN~aL~~A~~~~~~vl~vfi~dp~~~~~~~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~~ 81 (429)
T TIGR02765 2 VVLYWFRNDLRVHDNPALYKASSSSDTLIPLYCFDPRQFKLTHFFGFPKTGPARGKFLLESLKDLRTSLRKLGSDLLVRS 81 (429)
T ss_pred eEEEEeCCCCccccHHHHHHHHhcCCeEEEEEEECchHhccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Confidence 479999999999999999999987 6899999999988762 4899999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCCC----CCCCcchhhHH
Q 005554 117 GRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR 192 (691)
Q Consensus 117 g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~ 192 (691)
|++.++|++|+++++|++||+|.+|++++++||++|++.|.+.+| .++.+++++|++|+++ +++|++|++|+
T Consensus 82 G~~~~vl~~L~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~l~~p~~v~~~~~~~~~~ft~f~ 157 (429)
T TIGR02765 82 GKPEDVLPELIKELGVRTVFLHQEVGSEEKSVERLLQQALARLGI----HVEQHWGSTLYHEDDLPFDLEDLPDVFTQFR 157 (429)
T ss_pred CCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHHHHHHHHhcCc----eEEEecCCEeECHHhcCCCCCCCCCCchHHH
Confidence 999999999999999999999999999999999999999998887 8899999999988864 78899999999
Q ss_pred hhccc---cCCCCCCCC-ccCCcCCCCCCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCC
Q 005554 193 KLQRP---LTSPILPPT-LAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLN 268 (691)
Q Consensus 193 ~~~~~---~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 268 (691)
+++.. ...+++.|. ++..+.......+|.+++++.
T Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~----------------------------------------- 196 (429)
T TIGR02765 158 KQVEAKCSIRPPLPAPEKLPPLPSVDDPGWIPTLEDLGE----------------------------------------- 196 (429)
T ss_pred HHHHhhCCCCCCCCCcccCCCCcccccccCCCChhhcCC-----------------------------------------
Confidence 98643 222333331 111110000001121111110
Q ss_pred CCCCcccccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccc
Q 005554 269 NQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIIS 348 (691)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~ 348 (691)
+.. .......|+|||.+|+++|++|+. ...+..|++.||. .++.++||+||||||||+||
T Consensus 197 ---------~~~--~~~~~~~~~gGe~~A~~~L~~Fl~---~~~l~~Y~~~R~~------~~~~~~tS~LSpyL~~G~iS 256 (429)
T TIGR02765 197 ---------ESS--EVDRGLPFVGGETAGLARLKEYFW---SKDLKSYKETRNG------MLGPDYSTKFSPWLALGCVS 256 (429)
T ss_pred ---------Ccc--cccccCCcCchHHHHHHHHHHHHh---hccHhhhhhccCc------ccCCCCcCccCHHHhCCccc
Confidence 000 000011479999999999999983 3568899998753 24567899999999999999
Q ss_pred hhHHHHHHHHHhh
Q 005554 349 RRGVHYEAIKFEK 361 (691)
Q Consensus 349 ~~~~~~~~~~~~~ 361 (691)
+|+|++++.+++.
T Consensus 257 ~r~v~~~~~~~~~ 269 (429)
T TIGR02765 257 PRQIYEELQRYET 269 (429)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999977653
|
Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes. |
| >COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=353.48 Aligned_cols=246 Identities=26% Similarity=0.405 Sum_probs=204.3
Q ss_pred CcEEEEEcCCCCCcCCHHHHHHHhC-CC-eEEEEEECCcccccCChhHHHHHHHHHHHHHHHHHhcCCcEEEEECChHHH
Q 005554 45 GSAVIWFKQDLRVDDHLGLVAASKY-QA-VVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENV 122 (691)
Q Consensus 45 ~~~l~W~r~dlRl~DN~aL~~A~~~-~~-~~~~f~~~~~~~~~~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g~~~~~ 122 (691)
+++|||||||||++||+||.+|++. .+ +++|||++|+++...++++.+|+.+||++|+++|+++|++|++..|++.++
T Consensus 2 ~~~l~WfrrDLR~~DN~aL~~A~~~~~~~~~~vfi~~~~~~~~~~~~~~~Fl~~sL~~L~~~L~~~gi~L~v~~~~~~~~ 81 (461)
T COG0415 2 STVLVWFRRDLRLTDNAALAAACQSGQPVIIAVFILDPEQLGHASPRHAAFLLQSLQALQQSLAELGIPLLVREGDPEQV 81 (461)
T ss_pred CeEEEEeccccccCChHHHHHHHhcCCCceEEEEEechhhccccCHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCHHHH
Confidence 5789999999999999999999988 45 569999999998877999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCC----CCCCCcchhhHHhhcccc
Q 005554 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN----LNDLPVSHNEFRKLQRPL 198 (691)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~f~~~~~~~ 198 (691)
+++++++.++++|++|.+|+..++.||.+|+..|.+.|| .++++++++++.|.. .+++|++||+|+|+|...
T Consensus 82 l~~~~~~~~~~~v~~n~~~~~~~~~rD~al~~~l~~~gi----~~~~~~d~~l~~p~~~~t~~~~~y~vfT~F~k~~~~~ 157 (461)
T COG0415 82 LPELAKQLAATTVFWNRDYEEWERQRDAALAQPLTEVGI----AVHSFWDALLHEPGEVRTGSGEPYKVFTPFYKAWRDR 157 (461)
T ss_pred HHHHHHHhCcceEEeeeeechhHHHHHHHHHHHHHhcCc----eEEEeccccccCHhhccCCCCCCccccchHHHHHHHh
Confidence 999999999999999999999999999999999999998 888899999999974 499999999999986544
Q ss_pred ---CCCCCCCC-ccCCcCCCCCCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCCCCCCcc
Q 005554 199 ---TSPILPPT-LAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPR 274 (691)
Q Consensus 199 ---~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (691)
..|.+.|. +..... . ...+....+ | +|.
T Consensus 158 ~~~~~~~~~p~~~~~~~~-~--~~~~~~~~~-------P-----~~~--------------------------------- 189 (461)
T COG0415 158 LRILRPVPAPDVLDALRD-E--EPPPEEISL-------P-----DFS--------------------------------- 189 (461)
T ss_pred cccCCCCCCcchhccccc-c--ccCcccccC-------C-----ccc---------------------------------
Confidence 34444442 111110 0 000000000 0 000
Q ss_pred cccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccchhHHHH
Q 005554 275 KRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHY 354 (691)
Q Consensus 275 ~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~~~~~~~ 354 (691)
......+.|||++|+++|++|++ +++..|.++|| .|+.++||+|||||+||+||+|+||.
T Consensus 190 ---------~~~~~~~~~Ge~aA~~~l~~F~~----~~l~~Y~~~Rd-------~p~~~~TS~LSpyL~~G~IS~r~v~~ 249 (461)
T COG0415 190 ---------KFDVLLFTGGEKAALARLQDFLA----EGLDDYERTRD-------FPALDGTSRLSPYLAFGVISPREVYA 249 (461)
T ss_pred ---------cccccCCCchHHHHHHHHHHHHH----HHHHHHHHhcC-------CcccccccccCHHHHcCCcCHHHHHH
Confidence 00112689999999999999994 67999999886 68999999999999999999999999
Q ss_pred HHHHHhhh
Q 005554 355 EAIKFEKE 362 (691)
Q Consensus 355 ~~~~~~~~ 362 (691)
++.+....
T Consensus 250 ~~~~~~~~ 257 (461)
T COG0415 250 ALLAAESD 257 (461)
T ss_pred HHHHhhhc
Confidence 99887754
|
|
| >TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=363.66 Aligned_cols=246 Identities=25% Similarity=0.359 Sum_probs=197.6
Q ss_pred cEEEEEcCCCCCcCCHHHHHHHhC-CCeEEEEEECCccccc--CChhHHHHHHHHHHHHHHHHHhcCCcEEEEECChHHH
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENV 122 (691)
Q Consensus 46 ~~l~W~r~dlRl~DN~aL~~A~~~-~~~~~~f~~~~~~~~~--~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g~~~~~ 122 (691)
.+|||||||||++||+||.+|++. .+|+||||+||.++.. .+++|++||++||.+|+++|+++|++|+++.|++.++
T Consensus 2 ~vl~WfRrDLRl~DN~AL~~A~~~~~~vl~vfi~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~G~~L~v~~G~p~~v 81 (471)
T TIGR03556 2 LILFWHRRDLRLSDNIGLAAARQQSAKVVGLFCLDPNILQADDMAPARVAYLIGCLQELQQRYQQAGSQLLILQGDPVQL 81 (471)
T ss_pred CEEEEeCCCCCcchHHHHHHHHhcCCCEEEEEEEchhhhccccCCHHHHHHHHHHHHHHHHHHHHCCCCeEEEECCHHHH
Confidence 489999999999999999999987 6899999999988753 3788999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCCC----CCCCcchhhHHhhcccc
Q 005554 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL 198 (691)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~~~~~~ 198 (691)
|++|+++++|++||+|.+|++++++||++|++.|.+.+| .+..+++++|++|+.+ +++|++|++|++++...
T Consensus 82 l~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~l~~p~~i~~~~~~~y~~ft~f~k~~~~~ 157 (471)
T TIGR03556 82 IPQLAQQLGAKAVYWNLDVEPYGRKRDRAVAAALKEAGI----AVVTLWDQLLHSPDEILTGSGNPYTVYTPFWKNWSSL 157 (471)
T ss_pred HHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHHHHCCC----EEEEeCCcEEECccccccCCCCCCcchhHHHHHHHhc
Confidence 999999999999999999999999999999999998887 8999999999999864 77899999999986543
Q ss_pred C--CCCCCCC-ccCCcCCCC-------CCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCC
Q 005554 199 T--SPILPPT-LAGAKLEAD-------WGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLN 268 (691)
Q Consensus 199 ~--~p~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 268 (691)
. .|++.|. +...+.... ...+|.+++++
T Consensus 158 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------------------------------------------ 195 (471)
T TIGR03556 158 PKPTPVATPTELEGLTEAELEAAAPLGVIALPTAKDLG------------------------------------------ 195 (471)
T ss_pred cccCCCCCccccccCCccccccccccccccCCcccccc------------------------------------------
Confidence 2 2344432 211100000 00001000000
Q ss_pred CCCCcccccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccc
Q 005554 269 NQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIIS 348 (691)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~ 348 (691)
.+. ... ..|.|||.+|+++|+.|++ +++..|..+|| .|+.++||+|||||+||+||
T Consensus 196 --------~~~---~~~--~~~~gGe~~A~~~L~~f~~----~~l~~Y~~~r~-------~p~~~~tS~LSpyL~~G~iS 251 (471)
T TIGR03556 196 --------FDW---DGD--LILEPGETAAQARLEEFCD----RAIADYQEQRN-------FPALDGTSQLSPALKFGVIG 251 (471)
T ss_pred --------ccc---ccc--cCCCCcHHHHHHHHHHHHH----HHHHHhhhccC-------CCCCCCCCCCChhhcCCccc
Confidence 000 000 1479999999999999984 57999999875 46778999999999999999
Q ss_pred hhHHHHHHHHHhh
Q 005554 349 RRGVHYEAIKFEK 361 (691)
Q Consensus 349 ~~~~~~~~~~~~~ 361 (691)
+|+|++++.+..+
T Consensus 252 ~r~v~~~~~~~~~ 264 (471)
T TIGR03556 252 IRTVWQATQEAHE 264 (471)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999976543
|
This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420. |
| >TIGR02766 crypt_chrom_pln cryptochrome, plant family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=351.57 Aligned_cols=243 Identities=18% Similarity=0.209 Sum_probs=190.1
Q ss_pred EEEEcCCCCCcCCHHHHHHHhCCCeEEEEEECCccccc--CChhHHHHHHHHHHHHHHHHHhcCCcEEEEE-CChHHHHH
Q 005554 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRF-GRVENVIR 124 (691)
Q Consensus 48 l~W~r~dlRl~DN~aL~~A~~~~~~~~~f~~~~~~~~~--~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~-g~~~~~l~ 124 (691)
|+|||||||++||+||.+|++.++|+||||+||.+++. .+.++.+||++||.+|+++|+++|++|+++. |+++++|+
T Consensus 1 l~WFRrDLRl~DN~aL~~A~~~~~vlpvyi~dp~~~~~~~~~~~~~~fl~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~ 80 (475)
T TIGR02766 1 IVWFRRDLRVEDNPALAAAARAGPVIPVFVWAPEEEGQYYPGRVSRWWLKQSLAHLDQSLRSLGTCLVTIRSTDTVAALL 80 (475)
T ss_pred CEecCCCCCcchHHHHHHHHhCCCEEEEEEechHHhccccccHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence 69999999999999999998766899999999988753 3667788999999999999999999999985 89999999
Q ss_pred HHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCCC----CCCCcchhhHHhhccccCC
Q 005554 125 ELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPLTS 200 (691)
Q Consensus 125 ~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~~~~~~~~ 200 (691)
+|+++++|++||+|.+|++++++||++|++.|.+.|| .++.+++++|++|+++ +++|++|++|++++.....
T Consensus 81 ~l~~~~~i~~v~~~~~~~~~~~~rd~~v~~~l~~~gi----~~~~~~~~~l~~p~~i~~~~~~~~~~ft~f~~~~~~~~~ 156 (475)
T TIGR02766 81 DCVRSTGATRLFFNHLYDPVSLVRDHRAKEVLTAQGI----SVQSFNADLLYEPWEVYDELGRPFTMFAAFWERCLSMPY 156 (475)
T ss_pred HHHHHcCCCEEEEecccCHHHHHHHHHHHHHHHHcCC----EEEEecCCEEEChhhhcccCCCCCCeecHHHHHHHhccC
Confidence 9999999999999999999999999999999998888 8999999999999854 6789999999998644321
Q ss_pred -C---CCCCC-ccCCcCCCCCCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCCCCCCccc
Q 005554 201 -P---ILPPT-LAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRK 275 (691)
Q Consensus 201 -p---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (691)
+ .+.|. ++. .....+..++++.. . ...+.
T Consensus 157 ~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~--~-----~~~~~---------------------------------- 190 (475)
T TIGR02766 157 DPESPLLPPKKIIS-----GDVSKCSADDLGFE--D-----DSEKG---------------------------------- 190 (475)
T ss_pred CCCCCCCCccccCC-----CccccCChhhcCCC--C-----ccccc----------------------------------
Confidence 1 22221 100 00000111111100 0 00000
Q ss_pred ccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccchhHHHHH
Q 005554 276 RLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYE 355 (691)
Q Consensus 276 ~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~~~~~~~~ 355 (691)
.. ......|.|||.+|+++|+.|++ +++..|+.+|| .|+.++||+|||||+|||||+|+|+++
T Consensus 191 --~~----~~~~~~~~gGe~~A~~~L~~Fl~----~~~~~Y~~~Rd-------~p~~~~tS~LSPyL~~G~ISpR~v~~~ 253 (475)
T TIGR02766 191 --SN----ALLARAWSPGWSNADKALTEFIN----GPLLEYSKNRK-------KADSATTSLLSPYLHFGEVSVRKVFHL 253 (475)
T ss_pred --cc----ccccccCCCccHHHHHHHHHHHH----HHHHHHhhcCC-------CCCCCCCCCCCcccccCcccHHHHHHH
Confidence 00 00012489999999999999984 56889998875 456789999999999999999999999
Q ss_pred HH
Q 005554 356 AI 357 (691)
Q Consensus 356 ~~ 357 (691)
+.
T Consensus 254 ~~ 255 (475)
T TIGR02766 254 VR 255 (475)
T ss_pred HH
Confidence 85
|
At least five major families of cryptochomes and photolyases share FAD cofactor binding, sequence homology, and the ability to react to short wavelengths of visible light. Photolysases are responsible for light-dependent DNA repair by removal of two types of uv-induced DNA dimerizations. Cryptochromes have other functions, often regulatory and often largely unknown, which may include circadian clock entrainment and control of development. Members of this subfamily are known so far only in plants; they may show some photolyase activity in vitro but appear mostly to be regulatory proteins that respond to blue light. |
| >PRK10674 deoxyribodipyrimidine photolyase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=347.28 Aligned_cols=241 Identities=15% Similarity=0.195 Sum_probs=189.2
Q ss_pred EEEEEcCCCCCcCCHHHHHHHhC-C-CeEEEEEECCccccc--CChhHHHHHHHHHHHHHHHHHhcCCcEEEEEC----C
Q 005554 47 AVIWFKQDLRVDDHLGLVAASKY-Q-AVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFG----R 118 (691)
Q Consensus 47 ~l~W~r~dlRl~DN~aL~~A~~~-~-~~~~~f~~~~~~~~~--~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g----~ 118 (691)
+|||||||||++||+||.+|++. + +|+||||+||.++.. .+.+|++||+|||.+|+++|+++|++|+|+.| +
T Consensus 4 ~l~WfRrDLRl~DN~aL~~A~~~~~~~vlpvyv~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~~g~~~g~ 83 (472)
T PRK10674 4 HLVWFRNDLRLHDNLALAAACRDPSARVLALFIATPAQWAAHDMAPRQAAFINAQLNALQIALAEKGIPLLFHEVDDFAA 83 (472)
T ss_pred eEEEECCCCCcchHHHHHHHHhCCCCCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecCCcCC
Confidence 69999999999999999999977 3 799999999987643 48999999999999999999999999999975 7
Q ss_pred hHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCC----CCCCCcchhhHHhh
Q 005554 119 VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN----LNDLPVSHNEFRKL 194 (691)
Q Consensus 119 ~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~f~~~ 194 (691)
+.++|++|+++++|++||+|++|++++++||++|++.|. +| .+..+++++|++++. .+++|++|++|+++
T Consensus 84 ~~~vl~~l~~~~~i~~v~~~~~~~~~~~~rd~~v~~~l~--~i----~~~~~~~~~l~~~~~i~~~~~~~y~~ft~f~~~ 157 (472)
T PRK10674 84 SVEWLKQFCQQHQVTHLFYNYQYEVNERQRDAAVERALR--NV----VCQGFDDSVLLPPGSVMTGNHEMYKVFTPFKNA 157 (472)
T ss_pred HHHHHHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHcC--CC----EEEEecCceEeCccccccCCCCCCCcccHHHHH
Confidence 999999999999999999999999999999999999996 45 777899999999985 37889999999998
Q ss_pred ccc-cCCCCCCCCccCCcCCCCCCCC--CChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCCCCC
Q 005554 195 QRP-LTSPILPPTLAGAKLEADWGPL--PTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQH 271 (691)
Q Consensus 195 ~~~-~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~ 271 (691)
+.+ +..+.+.+ .+. +........ +.+..++ +.
T Consensus 158 ~~~~~~~~~p~~-~~~-p~~~~~~~~~~~~~~~~~-------------~~------------------------------ 192 (472)
T PRK10674 158 FLKRLREGDPEC-VPA-PKVRSSGAIEPLPPIPFN-------------YP------------------------------ 192 (472)
T ss_pred HHHhhcccCCcc-CCC-CccccccccCCCCccccc-------------Cc------------------------------
Confidence 654 33222211 100 000000000 0000000 00
Q ss_pred CcccccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccchhH
Q 005554 272 SPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRG 351 (691)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~~~~ 351 (691)
.. .. ....|.|||.+|+++|++|++ +++..|.+.|| .|+.++||+|||||+||+||+|+
T Consensus 193 -----~~---~~--~~~~~~gGe~~A~~~L~~f~~----~~l~~Y~~~r~-------~p~~~~tS~LSPyL~~G~iS~r~ 251 (472)
T PRK10674 193 -----QQ---SF--DTALFPVGEKAAIAQLRQFCQ----QGAGEYEQQRD-------FPAVDGTSRLSAYLATGVLSPRQ 251 (472)
T ss_pred -----cc---cc--ccCCCCCCHHHHHHHHHHHHH----HHHHHhccccC-------CCCccCCCCcChhhccCcCCHHH
Confidence 00 00 011479999999999999984 56899999875 45678999999999999999999
Q ss_pred HHHHHHHH
Q 005554 352 VHYEAIKF 359 (691)
Q Consensus 352 ~~~~~~~~ 359 (691)
|++++.+.
T Consensus 252 v~~~~~~~ 259 (472)
T PRK10674 252 CLHRLLAE 259 (472)
T ss_pred HHHHHHHH
Confidence 99999763
|
|
| >TIGR00591 phr2 photolyase PhrII | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=346.06 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=189.2
Q ss_pred CCCCCcEEEEEcCCCCCcCCHHHHHHHh-----CCCeEEEEEECCcccccCChhHHHHHHHHHHHHHHHHHhcCCcEEEE
Q 005554 41 KGRSGSAVIWFKQDLRVDDHLGLVAASK-----YQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIR 115 (691)
Q Consensus 41 ~~~~~~~l~W~r~dlRl~DN~aL~~A~~-----~~~~~~~f~~~~~~~~~~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~ 115 (691)
..++.++|||||+|||++||+||.+|++ ..+|+||||+||.++. .+.+|++||++||.+|+++|+++|++|+++
T Consensus 19 ~~~~~~vL~WFRrDLRl~DN~aL~~A~~~a~~~~~~vl~vyi~dp~~~~-~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~ 97 (454)
T TIGR00591 19 LRSSGVVVYWMSRDQRVQDNWALIAAQTLALKKKLPLHVCFCLVDFFLA-ATRRHYFFMLGGLDEVANECERLIIPFHLL 97 (454)
T ss_pred CCCCCeEEEEecCchhccCCHHHHHHHHHHHHcCCCEEEEEEeCCCccc-ccHHHHHHHHHHHHHHHHHHHHcCCceEEe
Confidence 3444679999999999999999999975 2489999999999875 488999999999999999999999999999
Q ss_pred ECChHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCCC--CCCCcchhhHHh
Q 005554 116 FGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL--NDLPVSHNEFRK 193 (691)
Q Consensus 116 ~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~f~~ 193 (691)
.|++.++|++|+++++|++||+|+++++++++||+.|++.|.+ +| .++.+++++|++++.+ ..++++|++|.+
T Consensus 98 ~g~~~~~l~~l~~~~~i~~V~~~~~~~~~~~~rd~~v~~~l~~-~i----~~~~~~~~~l~p~~~~~~~~~y~~ft~~~k 172 (454)
T TIGR00591 98 DGPPKELLPYFVDLHAAAAVVTDFSPLRQPEQWDEAVGKLLPK-DV----PFQQVDAHNVVPCWAASKKLEYAARTIRGK 172 (454)
T ss_pred ecChHHHHHHHHHHcCCCEEEEecccCcHHHHHHHHHHHHhcC-CC----cEEEECCceEeeCcccCCceeeeeecHHHH
Confidence 9999999999999999999999999999999999999999965 66 8999999999999653 456777887776
Q ss_pred hccccCCCCCC-CCc--cCCcCCCCCCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhccccccccCCCC
Q 005554 194 LQRPLTSPILP-PTL--AGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQ 270 (691)
Q Consensus 194 ~~~~~~~p~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 270 (691)
.....+..++. +.. .+.+.... +.+. .|... ...+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~~-----~~~~------------------ 210 (454)
T TIGR00591 173 IRKLLPEYLTEFPRVLKHPSPLDLE--AGPV-----------------DWDAV-----RDSL------------------ 210 (454)
T ss_pred HHHhChhhccccCCCccCCcccccc--cCcC-----------------CHHHH-----HHhc------------------
Confidence 52222111111 100 00000000 0000 00000 0000
Q ss_pred CCcccccCCcceeccCCCee-ecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccch
Q 005554 271 HSPRKRLDKSFFVTDKGNTV-GGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISR 349 (691)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~-~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~~ 349 (691)
..+.. .....| +|||.+|+++|+.|+. +++..|+++|| .|+.++||+||||||||+||+
T Consensus 211 -----~~~~~----~~~~~~~~gGe~aA~~~L~~F~~----~~l~~Y~~~Rn-------~p~~~~tS~LSPyL~~G~IS~ 270 (454)
T TIGR00591 211 -----AVERS----VEEVVWAKPGTTAGLIMLESFIE----KRLCFFRTRRN-------DPNNDALSMLSPWLHFGQLSA 270 (454)
T ss_pred -----cCcCC----cCCcCCCCCcHHHHHHHHHHHHH----HHHHHHHHhcC-------CcccccccccchHHhcCcccH
Confidence 00000 001136 9999999999999983 68999999986 467799999999999999999
Q ss_pred hHHHHHHHH
Q 005554 350 RGVHYEAIK 358 (691)
Q Consensus 350 ~~~~~~~~~ 358 (691)
|+|++++.+
T Consensus 271 R~i~~~~~~ 279 (454)
T TIGR00591 271 QRAARAVER 279 (454)
T ss_pred HHHHHHHHH
Confidence 999999754
|
All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=276.26 Aligned_cols=276 Identities=35% Similarity=0.532 Sum_probs=189.4
Q ss_pred CCceEEEEEEEcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-------cCC
Q 005554 403 EGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-------IVY 475 (691)
Q Consensus 403 ~~~~~~~~~~~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-------~~~ 475 (691)
+..++.++++++|.+++|...|+++++|||+||+++++..|..+++.|.+. |+|+++|+||||.|+.+. ..+
T Consensus 5 ~~~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 5 EPQVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CCCCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccC
Confidence 344557799999999999999866799999999999999999999999986 899999999999998753 358
Q ss_pred CHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhH
Q 005554 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 476 s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
+++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++........................+...
T Consensus 84 ~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 84 TFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRET 163 (294)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhch
Confidence 99999999999999999999999999999999999999999999999999986422110000000000000000000000
Q ss_pred -HHHHHH-----HhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEe
Q 005554 556 -LLLFYL-----RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 556 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
....+. .......+...+... ..........+...............+............+.++++|+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDD-SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccCh-hhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 000000 011112222222211 1222333333333222222222222222222122233567899999999999
Q ss_pred CCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 630 IKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
++|.+++.+. .+.+.+..++++++++ ++||++++|+|+++++.|.+|++++
T Consensus 243 ~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 243 EKDPWEPVEL-GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred cCCCCCChHH-HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 9999999974 4557788888888888 8999999999999999999999863
|
|
| >PF00875 DNA_photolyase: DNA photolyase from Prosite | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=259.89 Aligned_cols=155 Identities=26% Similarity=0.399 Sum_probs=128.2
Q ss_pred EEEEEcCCCCCcCCHHHHHHHhC-CCeEEEEEECCccccc--CChhHHHHHHHHHHHHHHHHHhcCCcEEEEECChHHHH
Q 005554 47 AVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVI 123 (691)
Q Consensus 47 ~l~W~r~dlRl~DN~aL~~A~~~-~~~~~~f~~~~~~~~~--~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g~~~~~l 123 (691)
+|||||+|||++||+||++|++. .+|+||||+||..... .|++|++||++||.+|+++|+++|++|+++.|++.++|
T Consensus 1 ~l~Wfr~DLRl~DN~aL~~A~~~~~~v~~vfv~d~~~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l 80 (165)
T PF00875_consen 1 VLVWFRRDLRLHDNPALHAAAQNGDPVLPVFVFDPEEFHPYRIGPRRRRFLLESLADLQESLRKLGIPLLVLRGDPEEVL 80 (165)
T ss_dssp EEEEESS--SSTT-HHHHHHHHTTSEEEEEEEE-HHGGTTCSSCHHHHHHHHHHHHHHHHHHHHTTS-EEEEESSHHHHH
T ss_pred CEEEEcCCCchhhhHHHHHHHHcCCCeEEEEEecccccccccCcchHHHHHHHHHHHHHHHHHhcCcceEEEecchHHHH
Confidence 69999999999999999999988 7999999999995443 39999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCCC----CCCCcchhhHHhhcccc-
Q 005554 124 RELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL- 198 (691)
Q Consensus 124 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~~~~~~- 198 (691)
++|+++++|++||+|++|++++++||++|++.|.+.|| .++.+++++|++++.+ +++|++|++|+|++.+.
T Consensus 81 ~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~L~~~~~i~~~~~~~~~vFtpf~k~~~~~~ 156 (165)
T PF00875_consen 81 PELAKEYGATAVYFNEEYTPYERRRDERVRKALKKHGI----KVHTFDDHTLVPPDDIPKKDGEPYKVFTPFRKKWEKQL 156 (165)
T ss_dssp HHHHHHHTESEEEEE---SHHHHHHHHHHHHHHHHTTS----EEEEE--SSSS-HHHCHSTTSSSHSSHHHHHHHHHCHC
T ss_pred HHHHHhcCcCeeEeccccCHHHHHHHHHHHHHHHhcce----EEEEECCcEEEeccccccCCCCCcccHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998887 9999999999999854 89999999999997653
Q ss_pred C-CCCCCC
Q 005554 199 T-SPILPP 205 (691)
Q Consensus 199 ~-~p~~~~ 205 (691)
. .|+|+|
T Consensus 157 ~~~p~p~p 164 (165)
T PF00875_consen 157 LEEPLPAP 164 (165)
T ss_dssp SC------
T ss_pred CCCCCCCC
Confidence 2 456554
|
; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B .... |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=265.33 Aligned_cols=273 Identities=18% Similarity=0.160 Sum_probs=184.1
Q ss_pred CceEEEEEEEcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHH
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~d 483 (691)
.+.+.++++.+|.+++|...| ++++|||+||++++...|..+++.|.+. |+||++|+||||.|+.+...++++++++|
T Consensus 5 ~~~~~~~~~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~d 82 (295)
T PRK03592 5 PPGEMRRVEVLGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARY 82 (295)
T ss_pred CCCcceEEEECCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 345567888999999999998 6789999999999999999999999987 69999999999999988778999999999
Q ss_pred HHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHH-HHHHHH
Q 005554 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL-LLFYLR 562 (691)
Q Consensus 484 l~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 562 (691)
+.+++++++.++++++||||||.+++.+|.++|++|+++|++++..... .+....... ......+.... ......
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 158 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPM-TWDDFPPAV---RELFQALRSPGEGEEMVL 158 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCc-chhhcchhH---HHHHHHHhCccccccccc
Confidence 9999999999999999999999999999999999999999999843221 100000000 00000000000 000000
Q ss_pred hhHHHHHHhhcCCC-CccccHHHHHHHHHhcCCcchHHHHHHHhcc-c----------cCcchHhhhcCCCCcEEEEEeC
Q 005554 563 LNISNFVKQCYPTR-RERADDWLISEMLRASYDPGVLVVLESIFSF-K----------LSLPLNYLLEGFKEKVLIIQGI 630 (691)
Q Consensus 563 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~l~~i~~PvLiI~G~ 630 (691)
....+....+... ...........+......+............ . ...+....+..+++|+|+|+|+
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 159 -EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred -chhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 0001111111100 0011111111221111111111111000000 0 0011234567899999999999
Q ss_pred CCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhhC
Q 005554 631 KDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 631 ~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
+|.++++....+.+.+..++++++++ ++||++++|+|+++++.|.+|+++...
T Consensus 238 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 99999665566767777788999887 899999999999999999999997654
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=251.48 Aligned_cols=277 Identities=22% Similarity=0.270 Sum_probs=190.7
Q ss_pred CceEEEEEEEcCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHH
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMW 480 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~ 480 (691)
..++.++++.+|.+++|.+.|++ +|.|+++||++.++..|+.++..|+.+||+|+++|+||+|.|+.|. ..|++..+
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l 99 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHH
Confidence 45678899999999999999865 8999999999999999999999999999999999999999999876 58999999
Q ss_pred HHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhh-hhhhhcCChhh-------h
Q 005554 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQF-SNERQASGPIR-------L 552 (691)
Q Consensus 481 a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~ 552 (691)
+.|+..++++++.++++++||+||+++|..+|..+|++|+++|+++.+.. .+....... .......+... .
T Consensus 100 ~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~-~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 100 VGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP-NPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC-CcccchhhhhccccCccceeEeccccCcc
Confidence 99999999999999999999999999999999999999999999998755 111100000 00000000000 0
Q ss_pred hhHHHHHHHHhhHHHHHHhhcC------CCCccccHHHHH----HHHHhcCCcchHHHHHHHhccccCc-chHhhhcCCC
Q 005554 553 GAQLLLFYLRLNISNFVKQCYP------TRRERADDWLIS----EMLRASYDPGVLVVLESIFSFKLSL-PLNYLLEGFK 621 (691)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~ 621 (691)
...+.....+.....+.....+ ..+.....|..+ .+.......++...++...++.... .....+.+++
T Consensus 179 E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~ 258 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKIT 258 (322)
T ss_pred hhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccc
Confidence 0000001111111111111111 000111122222 2222222222222122111111111 1233567899
Q ss_pred CcEEEEEeCCCCCCChhHHHHHHHHhCCCc-EEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 622 EKVLIIQGIKDPISDSKSKVAMFKEHCAGI-VIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 622 ~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~-~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+||++|+|+.|.+.+.....+.+++..++. +.+++ ++||+++.|+|++++++|.+|+++.
T Consensus 259 iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 259 IPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 999999999999999887778888888887 34444 9999999999999999999999874
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=264.50 Aligned_cols=272 Identities=32% Similarity=0.530 Sum_probs=182.8
Q ss_pred EEEEEcCe-EEEEEEeCCC-----CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHH
Q 005554 409 RIWRWNGY-QIQYTVAGKE-----GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWS 481 (691)
Q Consensus 409 ~~~~~~g~-~i~y~~~g~~-----~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a 481 (691)
+++.++|. +++|.+.|++ +|+|||+||++++...|.+++..|.+ +|+|+++|+||||.|+.+. ..+++++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a 142 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWA 142 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHH
Confidence 46777887 9999998853 48999999999999999999999987 6999999999999998764 478999999
Q ss_pred HHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHh-CccccceEEEecCCCCCCCchhhhhhhhhhhcCCh---hhh-----
Q 005554 482 ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGP---IRL----- 552 (691)
Q Consensus 482 ~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~-~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~---~~~----- 552 (691)
+++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++.+.................... ..+
T Consensus 143 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
T PLN02679 143 ELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRG 222 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchh
Confidence 999999999999999999999999999998874 79999999999986432111000000000000000 000
Q ss_pred -hhHHHHHH-HHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeC
Q 005554 553 -GAQLLLFY-LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGI 630 (691)
Q Consensus 553 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~ 630 (691)
........ .......++...+. ......+...+.+............+..........+....+.++++|||+|+|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~ 301 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYG-NKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGD 301 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhcc-CcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeC
Confidence 00000000 01112222222222 1122233333333222222222232222222212223445678999999999999
Q ss_pred CCCCCChhH----HHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 631 KDPISDSKS----KVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 631 ~D~~vp~~~----~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
+|.++|++. ..+.+.+.+++++++++ ++||++++|+|+++++.|.+||++..
T Consensus 302 ~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 302 QDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred CCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 999999863 12335556789998888 89999999999999999999998743
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=257.83 Aligned_cols=267 Identities=21% Similarity=0.175 Sum_probs=181.2
Q ss_pred eEEEEEEEcCeEEEEEEeC-C-CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHH
Q 005554 406 YSTRIWRWNGYQIQYTVAG-K-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483 (691)
Q Consensus 406 ~~~~~~~~~g~~i~y~~~g-~-~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~d 483 (691)
+..+++.++|.+++|...+ . .+++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+...+++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 2 FIFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred eeEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHH
Confidence 3457888999999998753 3 358999999999999999999999987 499999999999999877777899999999
Q ss_pred HHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHh
Q 005554 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRL 563 (691)
Q Consensus 484 l~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (691)
+.+++++++.++++|+||||||.+++.+|.++|++|+++|+++++........ ............ ..... .
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~-------~ 151 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG-KPKVLMMMASPR-RYIQP-------S 151 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC-chhHHHHhcCch-hhhcc-------c
Confidence 99999999999999999999999999999999999999999998754211000 000000000000 00000 0
Q ss_pred hHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHH
Q 005554 564 NISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643 (691)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~ 643 (691)
........++.... ............................. ...+....+.++++|+|+|+|++|.+++++. .+.
T Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~-~~~ 228 (276)
T TIGR02240 152 HGIHIAPDIYGGAF-RRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN-MRL 228 (276)
T ss_pred cccchhhhhcccee-eccchhhhhhhhhcccCCCchHHHHHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHH-HHH
Confidence 00000001111000 00001111111111111100001111111 1112234578999999999999999999984 566
Q ss_pred HHHhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHHhhhCCC
Q 005554 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKV 685 (691)
Q Consensus 644 ~~~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~~~~~~ 685 (691)
+.+..++++++++++||++++|+|+++++.|.+|+++..++.
T Consensus 229 l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 229 LAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred HHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhhc
Confidence 677789999988877999999999999999999999876643
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=259.53 Aligned_cols=268 Identities=34% Similarity=0.576 Sum_probs=186.7
Q ss_pred EEEEEEcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHH
Q 005554 408 TRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF 487 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~l 487 (691)
.+++.++|.+|+|...| ++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+...++.+.+++++.++
T Consensus 68 ~~~~~~~~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADF 145 (354)
T ss_pred ceEEEECCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 46888999999999988 678999999999999999999999987 5999999999999999887789999999999999
Q ss_pred HHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhh-hhh-------HHHHH
Q 005554 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIR-LGA-------QLLLF 559 (691)
Q Consensus 488 l~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~ 559 (691)
++.+..++++++||||||.+++.+|.++|++|+++|++++++...................... ... .....
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLG 225 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998643221110000000000000000 000 00000
Q ss_pred H------HHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHH----HHhccccCcchHhhhcCCCCcEEEEEe
Q 005554 560 Y------LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLE----SIFSFKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 560 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
. ............+. ......+...+........+....... .........+....+.++++|+++|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 226 FLFWQAKQPSRIESVLKSVYK-DKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHhcCHHHHHHHHHHhcC-CcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 0 00011111111221 122233333333333323332222211 111112233455678899999999999
Q ss_pred CCCCCCChhHHHHHHHHhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHH
Q 005554 630 IKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
++|.+++.+. .+.+.+..++.+++++++||+++.|+|+++++.|.+|++
T Consensus 305 ~~D~~v~~~~-~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAK-AEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHH-HHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 9999999884 566777889999888899999999999999999999986
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=252.88 Aligned_cols=266 Identities=21% Similarity=0.234 Sum_probs=177.6
Q ss_pred CCCCceEEEEEEEcC-----eEEEEEEeCC-CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--
Q 005554 401 SNEGVYSTRIWRWNG-----YQIQYTVAGK-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-- 472 (691)
Q Consensus 401 ~~~~~~~~~~~~~~g-----~~i~y~~~g~-~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-- 472 (691)
.+..++..++++.++ .+|+|...|+ ++|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~ 93 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRR 93 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCc
Confidence 334556778899999 8999999886 37899999999999999999999998779999999999999998754
Q ss_pred cCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhh
Q 005554 473 IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRL 552 (691)
Q Consensus 473 ~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (691)
..++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++................ .......
T Consensus 94 ~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~ 171 (302)
T PRK00870 94 EDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAW--RAFSQYS 171 (302)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhh--hcccccC
Confidence 35899999999999999999999999999999999999999999999999999874211110000000000 0000000
Q ss_pred hhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHH---HHhccc-------cCcchHhhhcCCCC
Q 005554 553 GAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLE---SIFSFK-------LSLPLNYLLEGFKE 622 (691)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~~~~~~l~~i~~ 622 (691)
.. ......+..... ..........+.............. ...... ........+.++++
T Consensus 172 ~~--------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 240 (302)
T PRK00870 172 PV--------LPVGRLVNGGTV---RDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDK 240 (302)
T ss_pred ch--------hhHHHHhhcccc---ccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCC
Confidence 00 000000000000 0001111111100000000000000 000000 00011234678999
Q ss_pred cEEEEEeCCCCCCChhHHHHHHHHhCCCcE---EEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 623 KVLIIQGIKDPISDSKSKVAMFKEHCAGIV---IREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 623 PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~---~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
|+++|+|++|.+++.. . +.+.+..++++ ++++ ++||++++|+|+++++.|.+||+++
T Consensus 241 P~lii~G~~D~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 241 PFLTAFSDSDPITGGG-D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ceEEEecCCCCcccCc-h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 9999999999999976 3 66777777765 6666 8999999999999999999999864
|
|
| >KOG0133 consensus Deoxyribodipyrimidine photolyase/cryptochrome [Replication, recombination and repair; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=261.21 Aligned_cols=263 Identities=22% Similarity=0.291 Sum_probs=194.7
Q ss_pred CcEEEEEcCCCCCcCCHHHHHHHhC-CCeEEEEEECCcccccC--ChhHHHHHHHHHHHHHHHHHhcCCcEEEEECChHH
Q 005554 45 GSAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSRY--SNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVEN 121 (691)
Q Consensus 45 ~~~l~W~r~dlRl~DN~aL~~A~~~-~~~~~~f~~~~~~~~~~--~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g~~~~ 121 (691)
.++|+|||+|||+||||||.+|+.. +++.||||+||+..... |..+++||.|+|.+|+++|+++|++|++++|.|+.
T Consensus 5 ~~~v~wfr~~lR~~dnpal~~a~~~~~~~~~v~i~d~~~~~~~~~g~~~~~~l~qsL~~ld~sl~~l~~~L~v~~~~p~~ 84 (531)
T KOG0133|consen 5 SKSVHWFRKGLRLHDNPALLAAAAGKEPVRPVFILDPEEAGSSNVGRNRWRFLLQSLEDLDQSLRELNSRLFVFRGHPIA 84 (531)
T ss_pred cceEEecccCcccccChhhHHHhccCCCceeEEEeCHhHhhccccchhHHHHHHHHHHHHHHHHHHhCCceEEEeCCchH
Confidence 5689999999999999999877766 89999999999987654 88999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceeccCC-----CCCCCcchhhHHhhcc
Q 005554 122 VIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN-----LNDLPVSHNEFRKLQR 196 (691)
Q Consensus 122 ~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~f~~~~~ 196 (691)
+|.++.++++++.|.++.+++++.+.||..++..+.+.|+ .+++...++++.++. .+++|..|..|+....
T Consensus 85 vl~~~~~~~~~~~l~~~~~~~p~~~vrD~~~~~~a~~l~i----~v~s~~s~~~~~~~~~i~~n~~k~pls~~~~~~~~~ 160 (531)
T KOG0133|consen 85 VLSRLLEQVGVQKLKFEYDMEPDGKVRDATIKSLATELGL----SVVSPVSHTLYLPDKIIEANGGKPPLSYKTFRGVCQ 160 (531)
T ss_pred HHhhhhhccceeEEEEEEeccCccccccHHHHHHHHHhhh----hhcccCchhhhcHHHHHHhcCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999988 888888999999973 5999999999998755
Q ss_pred ccCCCCCCC------CccCCcCCC----CCCCCCChhhhhhhhccCcchhchhhhhhcccchhhhhhHHhhhcccccccc
Q 005554 197 PLTSPILPP------TLAGAKLEA----DWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRN 266 (691)
Q Consensus 197 ~~~~p~~~~------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 266 (691)
.+..|.-+. .++..+..+ ....+|+++.+++..+
T Consensus 161 ~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~v~~~e~l~~~~~------------------------------------ 204 (531)
T KOG0133|consen 161 SMSAPKIPALVLSGLAVEKHPNFLANSKASAVVPTLELLRFIPS------------------------------------ 204 (531)
T ss_pred ccccccccccccccccCCCChhhhhhcccccccCCchhhccCcc------------------------------------
Confidence 554331111 111111000 0012233332221100
Q ss_pred CCCCCCcccccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccc
Q 005554 267 LNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGI 346 (691)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~ 346 (691)
+ .. ...|.||++.|+.+|++||. .. .+.+..+..+.+.+.-....|+.|||||+|||
T Consensus 205 --~-------~~--------~~~~~~g~s~al~~l~~~l~----~~--~~~an~~~~~~~~~~~~~~s~~~Ls~yL~fg~ 261 (531)
T KOG0133|consen 205 --N-------YG--------EVVWRGGESEALKRLDAHLK----VP--LWVANLELRYSNANSRVKISTTVLSPYLKFGC 261 (531)
T ss_pred --c-------cc--------ccccCCcccchhHHHHHHhh----HH--HHHhhhhccccccchhcCCCccccccceeecc
Confidence 0 00 01389999999999999983 22 34443333222211122477889999999999
Q ss_pred cchhHHHH--HHHHHhhhcCCCccCC
Q 005554 347 ISRRGVHY--EAIKFEKERNAGFLSP 370 (691)
Q Consensus 347 ~~~~~~~~--~~~~~~~~~~~~~~~~ 370 (691)
+|.|.+++ ..++.......++.++
T Consensus 262 ~svr~~~~~~~~k~V~~~~~~~s~~~ 287 (531)
T KOG0133|consen 262 LSVRYFYRCVRLKQVKWKAKKNSLPP 287 (531)
T ss_pred ceeEeehhHhHHHHHHHhhhcccCCc
Confidence 99999994 4445444444444344
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=242.69 Aligned_cols=265 Identities=21% Similarity=0.233 Sum_probs=175.1
Q ss_pred CceEEEEEEEcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHH
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSE 482 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~ 482 (691)
.++..++++++|.+++|...| ++|+|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.+. ..++.+++++
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHAR 89 (286)
T ss_pred ccccceEEEcCCcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHH
Confidence 346667899999999999988 578999999999999999999999987 4999999999999998764 3688999999
Q ss_pred HHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHH
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLR 562 (691)
Q Consensus 483 dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (691)
++.+++++++.++++++||||||.+++.+|..+|++|+++|++++...................... ..... ...
T Consensus 90 ~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~ 164 (286)
T PRK03204 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPV---QYAIL--RRN 164 (286)
T ss_pred HHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccc---hhhhh--hhh
Confidence 9999999999999999999999999999999999999999998875321111000000000000000 00000 000
Q ss_pred hhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhcc-ccCc----chHhhhc--CCCCcEEEEEeCCCCCC
Q 005554 563 LNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSF-KLSL----PLNYLLE--GFKEKVLIIQGIKDPIS 635 (691)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~l~--~i~~PvLiI~G~~D~~v 635 (691)
.....++.... ...........+......+............ .... .....+. .+++|||+|+|++|.++
T Consensus 165 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~ 241 (286)
T PRK03204 165 FFVERLIPAGT---EHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAF 241 (286)
T ss_pred HHHHHhccccc---cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCccc
Confidence 00011111100 0111111111221111111111111110000 0000 0001111 23899999999999998
Q ss_pred ChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHH
Q 005554 636 DSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678 (691)
Q Consensus 636 p~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL 678 (691)
++....+.+++..++.+++++ ++||++++|+|+++++.|.+||
T Consensus 242 ~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 242 RPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 776566788889999999988 8999999999999999999997
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=239.96 Aligned_cols=250 Identities=19% Similarity=0.186 Sum_probs=162.8
Q ss_pred EEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCE
Q 005554 417 QIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPV 496 (691)
Q Consensus 417 ~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v 496 (691)
.|+|...|.+.|+|||+||+++++..|..++..|.++ |+|+++|+||||.|+.+. .++++++++++.+ +..+++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~----~~~~~~ 76 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQ----QAPDKA 76 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHHHh----cCCCCe
Confidence 3678888854567999999999999999999999875 999999999999998654 5788877776653 466899
Q ss_pred EEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCC
Q 005554 497 HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR 576 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (691)
+++||||||.+++.+|.++|++|+++|++++++........ .. ........+.... ..........++.......
T Consensus 77 ~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~-~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (256)
T PRK10349 77 IWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEW-PG---IKPDVLAGFQQQL-SDDFQRTVERFLALQTMGT 151 (256)
T ss_pred EEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCC-Cc---ccHHHHHHHHHHH-HhchHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999885332111000 00 0000000000000 0000111122221111001
Q ss_pred CccccHHHH--HHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEE
Q 005554 577 RERADDWLI--SEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR 654 (691)
Q Consensus 577 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~ 654 (691)
........ ............ .............+....+.++++|||+|+|++|.++|.+ ..+.+.+.+++++++
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~i~~~~~~ 228 (256)
T PRK10349 152 -ETARQDARALKKTVLALPMPEV-DVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRK-VVPMLDKLWPHSESY 228 (256)
T ss_pred -chHHHHHHHHHHHhhccCCCcH-HHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHH-HHHHHHHhCCCCeEE
Confidence 11111111 111111111111 1111111111123445678899999999999999999887 467788888999998
Q ss_pred Ee-CCCCCCCccChHHHHHHHHHHHHh
Q 005554 655 EL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 655 ~~-~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
++ ++||++++|+|++|++.|.+|-++
T Consensus 229 ~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 229 IFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred EeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 88 899999999999999999998654
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=240.88 Aligned_cols=268 Identities=20% Similarity=0.171 Sum_probs=176.8
Q ss_pred ceEEEEEEEcCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHHH
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSE 482 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~ 482 (691)
++..++++++|.+++|...|++ +|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.. .++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 5 RDCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred CCccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 3445678899999999999864 78999999999999999999999987 59999999999999987665 789999999
Q ss_pred HHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHH--
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY-- 560 (691)
Q Consensus 483 dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 560 (691)
++.+++++++.++++|+||||||.+++.+|.++|++++++|++++.................................
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAA 163 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcc
Confidence 999999999989999999999999999999999999999999988643211100000000000000000000000000
Q ss_pred HHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcc-hHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhH
Q 005554 561 LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPG-VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639 (691)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~ 639 (691)
........+... ...........+........ ..........+. ..+....++++++|+++|+|++|.++|++.
T Consensus 164 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 164 DQQRVERLIRDT----GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWD-LAPLNRDLPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred cCcchhHHhhcc----ccccccchhhHHHHhhcCchhhhHHHHHhhccc-ccchhhhcccCCCCEEEEEeCCCcccCHHH
Confidence 000000111000 00000000000000000000 001111111111 112334577899999999999999999874
Q ss_pred HHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHH
Q 005554 640 KVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 640 ~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
.+.+.+..++.+++++ ++||++++|+|+++++.|.+|++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 239 -SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred -HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 5556777888888888 88999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=237.73 Aligned_cols=256 Identities=18% Similarity=0.206 Sum_probs=164.3
Q ss_pred CeEEEEEEeCCCCCeEEEEcCCCCChHHHHH---HHHHHhcCCCEEEEeCCCCCcCCCCCCcC-CCHHHHHHHHHHHHHH
Q 005554 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITLLGFGRSEKPNIV-YTELMWSELLRDFTVE 490 (691)
Q Consensus 415 g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~---~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~-~s~~~~a~dl~~ll~~ 490 (691)
|.+++|...| ++|+|||+||++++...|.. .+..|.+.||+|+++|+||||.|+.+..+ .....+++++.++++.
T Consensus 19 ~~~~~y~~~g-~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEAG-NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEecC-CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH
Confidence 6789999888 57899999999988777754 45567677899999999999999865322 2222568999999999
Q ss_pred hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHH
Q 005554 491 VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK 570 (691)
Q Consensus 491 l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (691)
++.++++++||||||.+++.+|.++|++|+++|++++...........+... ........ ..........++.
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~ 170 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEG------IKLLFKLY-AEPSYETLKQMLN 170 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHH------HHHHHHHh-cCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999997632111000000000 00000000 0000000111111
Q ss_pred hhcCCCCccccHHHHHHHHHh-cCCcchHHHHHHHhc--cccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHh
Q 005554 571 QCYPTRRERADDWLISEMLRA-SYDPGVLVVLESIFS--FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH 647 (691)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~ 647 (691)
... ...........+..... ...+........... .....+....+.++++|+|+|+|++|.+++++ ..+.+.+.
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~-~~~~~~~~ 248 (282)
T TIGR03343 171 VFL-FDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD-HGLKLLWN 248 (282)
T ss_pred hCc-cCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCch-hHHHHHHh
Confidence 111 01111111111111110 011111111100000 01122344567899999999999999999987 45667777
Q ss_pred CCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHh
Q 005554 648 CAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 648 ~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.++++++++ ++||++++|+|+++++.|.+||+.
T Consensus 249 ~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 249 MPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 899999888 899999999999999999999963
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=239.94 Aligned_cols=243 Identities=16% Similarity=0.109 Sum_probs=157.8
Q ss_pred eEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhCC-cCEEEEEeChhHH
Q 005554 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGY 506 (691)
Q Consensus 429 ~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~~-~~v~lvGhS~GG~ 506 (691)
+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+. ..++++++++|+.++++.++. ++++++||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 69999999999999999999998778999999999999998654 368899999999999999987 5999999999999
Q ss_pred HHHHHHHhCccccceEEEecCCCCCCCchhhhhhh--hhhhcCChhhh-hhHHHHHHHH-hhHHHHHHhhcCCCCccccH
Q 005554 507 FVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFS--NERQASGPIRL-GAQLLLFYLR-LNISNFVKQCYPTRRERADD 582 (691)
Q Consensus 507 ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 582 (691)
+++.+|.++|++|+++|++++.............. ........... .......... .....+....+.... ....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 163 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQS-PLED 163 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCC-CHHH
Confidence 99999999999999999999863211000000000 00000000000 0000000000 000001101000000 0000
Q ss_pred HHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCC
Q 005554 583 WLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHC 661 (691)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~ 661 (691)
.. ............. .... .+....+..+++|+++|+|++|.++|++ ..+.+.+..++++++++ ++||+
T Consensus 164 ~~--~~~~~~~~~~~~~-~~~~------~~~~~~~~~i~vP~lvi~g~~D~~~~~~-~~~~~~~~~~~a~~~~i~~~GH~ 233 (255)
T PLN02965 164 YT--LSSKLLRPAPVRA-FQDL------DKLPPNPEAEKVPRVYIKTAKDNLFDPV-RQDVMVENWPPAQTYVLEDSDHS 233 (255)
T ss_pred HH--HHHHhcCCCCCcc-hhhh------hhccchhhcCCCCEEEEEcCCCCCCCHH-HHHHHHHhCCcceEEEecCCCCc
Confidence 00 0000000000000 0000 0111234578999999999999999997 57788889999998887 89999
Q ss_pred CCccChHHHHHHHHHHHHhhh
Q 005554 662 PHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 662 ~~~e~pe~v~~~I~~fL~~~~ 682 (691)
+++|+|++|++.|.+|++..+
T Consensus 234 ~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 234 AFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999998754
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=244.64 Aligned_cols=268 Identities=15% Similarity=0.138 Sum_probs=169.5
Q ss_pred EcCeEEEEEEeCCC--------CCeEEEEcCCCCChHHHH--HHHHHH-------hcCCCEEEEeCCCCCcCCCCCCc--
Q 005554 413 WNGYQIQYTVAGKE--------GPAILLVHGFGAFLEHYR--DNIYDI-------ADGGNRVWAITLLGFGRSEKPNI-- 473 (691)
Q Consensus 413 ~~g~~i~y~~~g~~--------~p~VlliHG~~~~~~~~~--~~~~~L-------~~~G~~Vi~~D~~G~G~S~~~~~-- 473 (691)
.+|.+++|...|++ +|+|||+||++++...|. .+...| ..++|+||++|+||||.|+.+..
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 67899999999863 689999999999988875 455544 13469999999999999987643
Q ss_pred -----CCCHHHHHHHHHHHH-HHhCCcCEE-EEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchh--hhhh-hhh
Q 005554 474 -----VYTELMWSELLRDFT-VEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYS--FLQF-SNE 543 (691)
Q Consensus 474 -----~~s~~~~a~dl~~ll-~~l~~~~v~-lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~--~~~~-~~~ 543 (691)
.++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.+....... .... ...
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 489999999988854 889998885 899999999999999999999999999988643211110 0000 000
Q ss_pred hhc--CCh--h-hhhhHHHHHHHHhhHHHH-----HHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcch
Q 005554 544 RQA--SGP--I-RLGAQLLLFYLRLNISNF-----VKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPL 613 (691)
Q Consensus 544 ~~~--~~~--~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (691)
... .+. . ............. ...+ ................................. .........+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ 284 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPM-FAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFL-YQWDSSRDYNP 284 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHH-HHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHH-HHHHHhhccCh
Confidence 000 000 0 0000000000000 0000 000000000000111112111111111111111 11111122345
Q ss_pred HhhhcCCCCcEEEEEeCCCCCCChhHH-HHHHHHhCCCcEEEEe-CC----CCCCCccChHHHHHHHHHHHHhhhC
Q 005554 614 NYLLEGFKEKVLIIQGIKDPISDSKSK-VAMFKEHCAGIVIREL-DA----GHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 614 ~~~l~~i~~PvLiI~G~~D~~vp~~~~-~~~~~~~~~~~~~~~~-~~----GH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
...+.+|++|||+|+|++|.++|++.. .+.+.+.+|+++++++ ++ ||+++ |+|+++++.|.+||+++..
T Consensus 285 ~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 285 SPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 567889999999999999999998743 2667888899999888 65 99997 8999999999999987653
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-26 Score=244.25 Aligned_cols=272 Identities=19% Similarity=0.250 Sum_probs=174.0
Q ss_pred ceEEEEEEEcCeEEEEEEeCCC----CCeEEEEcCCCCChHHHHH-HHHHHh---cCCCEEEEeCCCCCcCCCCCC-cCC
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRD-NIYDIA---DGGNRVWAITLLGFGRSEKPN-IVY 475 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~----~p~VlliHG~~~~~~~~~~-~~~~L~---~~G~~Vi~~D~~G~G~S~~~~-~~~ 475 (691)
.....+...+|.+++|...++. +|+|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+. ..+
T Consensus 175 ~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~y 254 (481)
T PLN03087 175 KFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLY 254 (481)
T ss_pred ceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcC
Confidence 4455677888999999998864 4799999999999999985 446665 358999999999999998764 468
Q ss_pred CHHHHHHHHH-HHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhh-hhhh-hh--hhcCChh
Q 005554 476 TELMWSELLR-DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSF-LQFS-NE--RQASGPI 550 (691)
Q Consensus 476 s~~~~a~dl~-~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~-~~~~-~~--~~~~~~~ 550 (691)
+++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++....+.... .... .. ....+..
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 9999999995 8999999999999999999999999999999999999999986543332110 0000 00 0000000
Q ss_pred hhhhHHHHHHHH---hh----------HHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhcc-c--cCcchH
Q 005554 551 RLGAQLLLFYLR---LN----------ISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSF-K--LSLPLN 614 (691)
Q Consensus 551 ~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 614 (691)
.........+.. .. ....+..... .........+.......... ...+..+... . ......
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~~~-~~~l~~~i~~~~~~l~~~l~ 411 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLT--RNRMRTFLIEGFFCHTHNAA-WHTLHNIICGSGSKLDGYLD 411 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhh--hhhhhHHHHHHHHhccchhh-HHHHHHHHhchhhhhhhHHH
Confidence 000000000000 00 0000000000 00000111111110000000 0011111100 0 001122
Q ss_pred hhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCc-cChHHHHHHHHHHHHh
Q 005554 615 YLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHD-EKPEEVNSIISEWIVT 680 (691)
Q Consensus 615 ~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~-e~pe~v~~~I~~fL~~ 680 (691)
....++++|+|+|+|++|.++|++. .+.+++.+|+++++++ ++||++++ |+|+++++.|.+|...
T Consensus 412 ~l~~~I~vPtLII~Ge~D~ivP~~~-~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 412 HVRDQLKCDVAIFHGGDDELIPVEC-SYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHhCCCCEEEEEECCCCCCCHHH-HHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2344799999999999999999984 5667888899999988 99999986 9999999999999965
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=242.00 Aligned_cols=270 Identities=16% Similarity=0.178 Sum_probs=168.9
Q ss_pred ceEEEEEEEcCeEEEEEEeCCCCCeEEEEcCCCCChH------------HHHHHHH---HHhcCCCEEEEeCCCCCcCCC
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE------------HYRDNIY---DIADGGNRVWAITLLGFGRSE 469 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~~p~VlliHG~~~~~~------------~~~~~~~---~L~~~G~~Vi~~D~~G~G~S~ 469 (691)
++...+.+.+|.+|+|...|+.++++||+||++++.. .|..++. .|...+|+||++|+||||.|.
T Consensus 35 ~~~~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~ 114 (343)
T PRK08775 35 PLSMRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL 114 (343)
T ss_pred ceeecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC
Confidence 5666677789999999999965656777776665544 6888886 574346999999999999884
Q ss_pred CCCcCCCHHHHHHHHHHHHHHhCCcCE-EEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhh-hhhhhhcC
Q 005554 470 KPNIVYTELMWSELLRDFTVEVVGEPV-HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQ-FSNERQAS 547 (691)
Q Consensus 470 ~~~~~~s~~~~a~dl~~ll~~l~~~~v-~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~-~~~~~~~~ 547 (691)
...++++++++|+.+++++++++++ +|+||||||++++.+|.++|++|+++|++++.....+...... ........
T Consensus 115 --~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~ 192 (343)
T PRK08775 115 --DVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVAL 192 (343)
T ss_pred --CCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHc
Confidence 3367889999999999999999764 7999999999999999999999999999998643221110000 00000000
Q ss_pred C----hhhhhhHHHHH--HHH-hhHHHHHHhhcCCCCc--------cccHHHHHH---HHHhcCCcchHHHHHHHhcccc
Q 005554 548 G----PIRLGAQLLLF--YLR-LNISNFVKQCYPTRRE--------RADDWLISE---MLRASYDPGVLVVLESIFSFKL 609 (691)
Q Consensus 548 ~----~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 609 (691)
. ........... ... .....+... +..... ......... .................. .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~ 268 (343)
T PRK08775 193 GQLQCAEKHGLALARQLAMLSYRTPEEFEER-FDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID---L 268 (343)
T ss_pred CCCCCCchhHHHHHHHHHHHHcCCHHHHHHH-hCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh---h
Confidence 0 00000000000 000 000111111 111100 001111111 111111111111111100 0
Q ss_pred CcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-C-CCCCCCccChHHHHHHHHHHHHhhhC
Q 005554 610 SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-D-AGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 610 ~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~-~GH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
. ...+.+|++|+|+|+|++|.++|++...+..+...++++++++ + +||++++|+|++|++.|.+||++...
T Consensus 269 ~---~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 269 H---RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTGE 341 (343)
T ss_pred c---CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhccc
Confidence 0 1135789999999999999999988555554445578888888 5 89999999999999999999987653
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-25 Score=235.14 Aligned_cols=259 Identities=19% Similarity=0.158 Sum_probs=169.3
Q ss_pred EEEcCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc----CCCHHHHHHHHH
Q 005554 411 WRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI----VYTELMWSELLR 485 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~----~~s~~~~a~dl~ 485 (691)
++.+|.+++|...|+. +|+|||+||++++...|+.++..|.+ +|+|+++|+||||.|+.+.. .++++++++++.
T Consensus 110 ~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~ 188 (383)
T PLN03084 110 ASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLE 188 (383)
T ss_pred EcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHH
Confidence 4578999999999864 78999999999999999999999986 69999999999999987653 589999999999
Q ss_pred HHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhH
Q 005554 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNI 565 (691)
Q Consensus 486 ~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (691)
+++++++.++++|+|||+||.+++.+|..+|++|+++|+++++....... .+..... ..................
T Consensus 189 ~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~--~p~~l~~---~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 189 SLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAK--LPSTLSE---FSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccccc--chHHHHH---HHHHHhhhhhhcchHHHH
Confidence 99999999999999999999999999999999999999999864321100 0000000 000000000000000000
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHhcCCcch-----HHHHHHHhccccC--cchHhh--hcCCCCcEEEEEeCCCCCCC
Q 005554 566 SNFVKQCYPTRRERADDWLISEMLRASYDPGV-----LVVLESIFSFKLS--LPLNYL--LEGFKEKVLIIQGIKDPISD 636 (691)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~--l~~i~~PvLiI~G~~D~~vp 636 (691)
...+.. .......+.....+.......+. ......+...... ...... ...+++|||+|+|+.|.+++
T Consensus 264 ~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~ 340 (383)
T PLN03084 264 DKALTS---CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN 340 (383)
T ss_pred hhhhcc---cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC
Confidence 000100 00111111111122111111110 0011111110000 001111 13689999999999999999
Q ss_pred hhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHh
Q 005554 637 SKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.+.. +.+.+. ++.+++++ ++||++++|+|+++++.|.+||++
T Consensus 341 ~~~~-~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 341 YDGV-EDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHH-HHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8754 444444 47788777 899999999999999999999863
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=224.42 Aligned_cols=234 Identities=19% Similarity=0.188 Sum_probs=156.6
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
+|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.++++.++.++++|+||||||.
T Consensus 16 ~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 78999999999999999999999987 5999999999999998654 689999999999999999999999999999999
Q ss_pred HHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHH
Q 005554 507 FVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLIS 586 (691)
Q Consensus 507 ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (691)
+++.+|.++|++|+++|++++................. ...... ...........+..... . .....
T Consensus 94 va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~--~----~~~~~ 160 (255)
T PRK10673 94 AVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAI-----NAVSEA--GATTRQQAAAIMRQHLN--E----EGVIQ 160 (255)
T ss_pred HHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHH-----HHhhhc--ccccHHHHHHHHHHhcC--C----HHHHH
Confidence 99999999999999999998643221100000000000 000000 00000000001111100 0 00000
Q ss_pred HHHHhcCCc----chHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCC
Q 005554 587 EMLRASYDP----GVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHC 661 (691)
Q Consensus 587 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~ 661 (691)
......... ........... ......+..+++|+|+|+|++|..++.+ ..+.+.+..++++++++ ++||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~ 235 (255)
T PRK10673 161 FLLKSFVDGEWRFNVPVLWDQYPH----IVGWEKIPAWPHPALFIRGGNSPYVTEA-YRDDLLAQFPQARAHVIAGAGHW 235 (255)
T ss_pred HHHhcCCcceeEeeHHHHHHhHHH----HhCCcccCCCCCCeEEEECCCCCCCCHH-HHHHHHHhCCCcEEEEeCCCCCe
Confidence 000000000 00000000000 0001235678999999999999999987 56767888899998888 99999
Q ss_pred CCccChHHHHHHHHHHHHh
Q 005554 662 PHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 662 ~~~e~pe~v~~~I~~fL~~ 680 (691)
+++++|+++++.|.+||++
T Consensus 236 ~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eeccCHHHHHHHHHHHHhc
Confidence 9999999999999999975
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=223.17 Aligned_cols=247 Identities=18% Similarity=0.213 Sum_probs=165.8
Q ss_pred EEEEEeCCC--CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcC
Q 005554 418 IQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEP 495 (691)
Q Consensus 418 i~y~~~g~~--~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~ 495 (691)
++|...|++ +|+|||+||++++...|.++++.|.+ ||+|+++|+||||.|+.+...++++++++++.++++.++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 567777753 67899999999999999999999875 799999999999999877778899999999999999999999
Q ss_pred EEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCC
Q 005554 496 VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPT 575 (691)
Q Consensus 496 v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (691)
++++||||||++++.+|.++|++|+++|+++++.................... ...........++...+..
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 152 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEG--------LAALADAVLERWFTPGFRE 152 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhcc--------HHHHHHHHHHHHccccccc
Confidence 99999999999999999999999999999987643211100000000000000 0000000111111111110
Q ss_pred CCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEE
Q 005554 576 RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRE 655 (691)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 655 (691)
........+........... ...........+....+.++++|+++++|++|.++|.+. .+.+.+..++.++++
T Consensus 153 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~ 226 (251)
T TIGR02427 153 ----AHPARLDLYRNMLVRQPPDG-YAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPEL-VREIADLVPGARFAE 226 (251)
T ss_pred ----CChHHHHHHHHHHHhcCHHH-HHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHH-HHHHHHhCCCceEEE
Confidence 00011111111000000000 001111111223445677899999999999999999984 455666678888888
Q ss_pred e-CCCCCCCccChHHHHHHHHHHHH
Q 005554 656 L-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 656 ~-~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
+ ++||++++++|+++++.|.+|++
T Consensus 227 ~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 227 IRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred ECCCCCcccccChHHHHHHHHHHhC
Confidence 7 89999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=238.05 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=167.2
Q ss_pred EEEEEcCeEEEEEEeCCC----CCeEEEEcCCCCChH-HHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHHH
Q 005554 409 RIWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLE-HYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSE 482 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~----~p~VlliHG~~~~~~-~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~ 482 (691)
.++..+|.+|+|..+++. +++|||+||++++.. .|..++..|.++||+|+++|+||||.|+.+.. ..+++++++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 144 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVD 144 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHH
Confidence 455668999999988752 568999999998865 46789999998899999999999999987543 358899999
Q ss_pred HHHHHHHHhCC------cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHH
Q 005554 483 LLRDFTVEVVG------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (691)
Q Consensus 483 dl~~ll~~l~~------~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (691)
|+.++++.+.. .+++|+||||||++++.++.++|++|+++|+++|........... .........
T Consensus 145 dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~--------~~~~~~~~~- 215 (349)
T PLN02385 145 DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPP--------PLVLQILIL- 215 (349)
T ss_pred HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCc--------hHHHHHHHH-
Confidence 99999988754 379999999999999999999999999999999864321110000 000000000
Q ss_pred HHHHHHhhHHHHHHhhcCCCC--cc-ccHHHHHHHHHh----cC-CcchHHHHHHHhccccCcchHhhhcCCCCcEEEEE
Q 005554 557 LLFYLRLNISNFVKQCYPTRR--ER-ADDWLISEMLRA----SY-DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQ 628 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 628 (691)
... ..... ...+... .. ............ .. ........ ..+.. ..+....+.++++|+|+|+
T Consensus 216 ---~~~-~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~~~~~l~~i~~P~Lii~ 286 (349)
T PLN02385 216 ---LAN-LLPKA--KLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAV-ELLRT--TQEIEMQLEEVSLPLLILH 286 (349)
T ss_pred ---HHH-HCCCc--eecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHH-HHHHH--HHHHHHhcccCCCCEEEEE
Confidence 000 00000 0000000 00 000000000000 00 00111111 11110 1123345778999999999
Q ss_pred eCCCCCCChhHHHHHHHHhC-CCcEEEEe-CCCCCCCccChHH----HHHHHHHHHHhhhC
Q 005554 629 GIKDPISDSKSKVAMFKEHC-AGIVIREL-DAGHCPHDEKPEE----VNSIISEWIVTIES 683 (691)
Q Consensus 629 G~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e~pe~----v~~~I~~fL~~~~~ 683 (691)
|++|.++|++....+.+... ++++++++ ++||+++.|+|++ +++.|.+||++...
T Consensus 287 G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 287 GEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred eCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999986555554443 56788887 8999999999986 88899999997653
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=228.06 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=161.6
Q ss_pred EEEEcCeEEEEEEeCCC---CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHHHHHH
Q 005554 410 IWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLR 485 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~~---~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~dl~ 485 (691)
++..+|.+|+|..+.+. ++.|+++||+++++..|..+++.|.++||+|+++|+||||.|+.... ..++.++.+|+.
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 55668999999877542 45677779999999999999999999999999999999999976432 235566667777
Q ss_pred HHHHHh----CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHH
Q 005554 486 DFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561 (691)
Q Consensus 486 ~ll~~l----~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (691)
..+..+ ...+++|+||||||.+++.+|.++|++|+++|+++|........ ....+.........
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~------------~~~~~~~~~~~~~~ 152 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVP------------RLNLLAAKLMGIFY 152 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccccc------------HHHHHHHHHHHHhC
Confidence 766554 34689999999999999999999999999999999864311000 00000000000000
Q ss_pred HhhHHHHHHhhcCCCCccccHHHHHHHHHhcCC---cchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChh
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYD---PGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~ 638 (691)
.. .......+......... ...+...... ............. ..+....+.++++|||+|+|++|.++|++
T Consensus 153 ~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvliv~G~~D~i~~~~ 226 (276)
T PHA02857 153 PN---KIVGKLCPESVSRDMDE-VYKYQYDPLVNHEKIKAGFASQVLKA--TNKVRKIIPKIKTPILILQGTNNEISDVS 226 (276)
T ss_pred CC---CccCCCCHhhccCCHHH-HHHHhcCCCccCCCccHHHHHHHHHH--HHHHHHhcccCCCCEEEEecCCCCcCChH
Confidence 00 00000000000000000 0000000000 0000011111110 11233467789999999999999999998
Q ss_pred HHHHHHHHhCCCcEEEEe-CCCCCCCccCh---HHHHHHHHHHHHhh
Q 005554 639 SKVAMFKEHCAGIVIREL-DAGHCPHDEKP---EEVNSIISEWIVTI 681 (691)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p---e~v~~~I~~fL~~~ 681 (691)
...++.+...++++++++ ++||.++.|.+ +++.+.|.+||++.
T Consensus 227 ~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 227 GAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 766665555567888877 89999999976 67999999999985
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-25 Score=223.00 Aligned_cols=250 Identities=18% Similarity=0.233 Sum_probs=163.0
Q ss_pred EEEEEeCC---CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhCC
Q 005554 418 IQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG 493 (691)
Q Consensus 418 i~y~~~g~---~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~~ 493 (691)
|+|...|+ ++|+|||+||++++...|..++..|.+ ||+|+++|+||||.|..+. ..++++++++++.++++.++.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC
Confidence 46677774 478999999999999999999988876 6999999999999998653 568999999999999999999
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHH--Hh
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFV--KQ 571 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 571 (691)
++++++||||||.+++.+|.++|++|+++|++++.....+..... ... ...+...... ..+.... ..++ ..
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~-~~~~~~~~ 152 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRC-FDV--RIALLQHAGP---EAYVHAQ-ALFLYPAD 152 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHH-HHH--HHHHHhccCc---chhhhhh-hhhhcccc
Confidence 999999999999999999999999999999998754321110000 000 0000000000 0000000 0000 00
Q ss_pred hcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCc
Q 005554 572 CYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651 (691)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~ 651 (691)
+................................ ...+....+..+++|+++++|++|.++|++. .+.+.+..++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 227 (257)
T TIGR03611 153 WISENAARLAADEAHALAHFPGKANVLRRINAL----EAFDVSARLDRIQHPVLLIANRDDMLVPYTQ-SLRLAAALPNA 227 (257)
T ss_pred HhhccchhhhhhhhhcccccCccHHHHHHHHHH----HcCCcHHHhcccCccEEEEecCcCcccCHHH-HHHHHHhcCCc
Confidence 000000000000000000000000011111111 1122335677899999999999999999985 45566667888
Q ss_pred EEEEe-CCCCCCCccChHHHHHHHHHHHHh
Q 005554 652 VIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 652 ~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+++++ ++||++++++|+++++.|.+||++
T Consensus 228 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 228 QLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred eEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 88877 899999999999999999999963
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-25 Score=220.98 Aligned_cols=234 Identities=15% Similarity=0.150 Sum_probs=150.0
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+. ..+++++++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 678999999999999999999988 3 5999999999999998765 358999999999999999999999999999999
Q ss_pred HHHHHHHhCccc-cceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCC-CccccHHH
Q 005554 507 FVAIVACLWPAV-VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR-RERADDWL 584 (691)
Q Consensus 507 ial~~A~~~P~~-V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 584 (691)
+++.+|.++|+. |+++|++++.....+...... .......+... +........+..++... ........
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQA-RWQNDRQWAQR--------FRQEPLEQVLADWYQQPVFASLNAEQ 149 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHH-HHhhhHHHHHH--------hccCcHHHHHHHHHhcchhhccCccH
Confidence 999999999764 999999987643222110000 00000000000 00000111111111000 00001111
Q ss_pred HHHHHHhcCCcchHHHHHHHh---ccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCC
Q 005554 585 ISEMLRASYDPGVLVVLESIF---SFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGH 660 (691)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH 660 (691)
...+......... ....... ......+....+.++++|+++|+|++|..+.. +... .+++++++ ++||
T Consensus 150 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~------~~~~-~~~~~~~i~~~gH 221 (242)
T PRK11126 150 RQQLVAKRSNNNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQA------LAQQ-LALPLHVIPNAGH 221 (242)
T ss_pred HHHHHHhcccCCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHHH------HHHH-hcCeEEEeCCCCC
Confidence 1111111110000 0111111 11122344567889999999999999985421 1122 37788877 8999
Q ss_pred CCCccChHHHHHHHHHHHHh
Q 005554 661 CPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 661 ~~~~e~pe~v~~~I~~fL~~ 680 (691)
++++|+|+++++.|.+|+++
T Consensus 222 ~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 222 NAHRENPAAFAASLAQILRL 241 (242)
T ss_pred chhhhChHHHHHHHHHHHhh
Confidence 99999999999999999975
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=233.15 Aligned_cols=270 Identities=13% Similarity=0.056 Sum_probs=164.5
Q ss_pred EEcCeEEEEEEeCCC----CCeEEEEcCCCCChHHHHHHH---HHHhcCCCEEEEeCCCCCcCCCCCCc---CCCHHH--
Q 005554 412 RWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRDNI---YDIADGGNRVWAITLLGFGRSEKPNI---VYTELM-- 479 (691)
Q Consensus 412 ~~~g~~i~y~~~g~~----~p~VlliHG~~~~~~~~~~~~---~~L~~~G~~Vi~~D~~G~G~S~~~~~---~~s~~~-- 479 (691)
+.+|.+|+|...|+. .|+||++||++++...|..++ ..|...+|+||++|+||||.|+.+.. .++++.
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 457899999999852 356777777777766665443 36665679999999999999986532 344432
Q ss_pred ---HHHHHHH----HHHHhCCcC-EEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhh--hhhhh--hhcC
Q 005554 480 ---WSELLRD----FTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL--QFSNE--RQAS 547 (691)
Q Consensus 480 ---~a~dl~~----ll~~l~~~~-v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~--~~~~~--~~~~ 547 (691)
+++++.+ +++++++++ ++||||||||++|+.+|.+||++|+++|++++.....+..... ..... ....
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 4566654 778899999 4799999999999999999999999999998764322110000 00000 0000
Q ss_pred ----Chh----hhhhHHHHHHH-HhhHHHHHHhh-cCCCCccccHHHHHHHHHh----cCCcchHHHHHHHhccc--c--
Q 005554 548 ----GPI----RLGAQLLLFYL-RLNISNFVKQC-YPTRRERADDWLISEMLRA----SYDPGVLVVLESIFSFK--L-- 609 (691)
Q Consensus 548 ----~~~----~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~-- 609 (691)
+.. ........... ......++... +.................. .........+....... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (339)
T PRK07581 182 FNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNP 261 (339)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCc
Confidence 000 00000000000 00011111110 0000000001111111111 11112222222222111 1
Q ss_pred --CcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-C-CCCCCCccChHHHHHHHHHHHHhhh
Q 005554 610 --SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-D-AGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 610 --~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~-~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
..+....+.+|++|||+|+|++|.++|++. .+.+.+.+++++++++ + +||++++|+|++++..|.+||++..
T Consensus 262 ~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~-~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 262 AYGGDLAAALGSITAKTFVMPISTDLYFPPED-CEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred ccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 124566788999999999999999999884 5566778899998888 6 8999999999999999999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-24 Score=211.60 Aligned_cols=275 Identities=23% Similarity=0.293 Sum_probs=172.6
Q ss_pred CceEEEEEEEc-CeEEEEEEeC---CCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc----CC
Q 005554 404 GVYSTRIWRWN-GYQIQYTVAG---KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI----VY 475 (691)
Q Consensus 404 ~~~~~~~~~~~-g~~i~y~~~g---~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~----~~ 475 (691)
.++..+++.+. +..+...... ..+.++|||||+|++...|...++.|++ .++|+++|++|+|.|+.|.- ..
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~ 141 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTT 141 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCccc
Confidence 34444555553 3344433332 2378999999999999999999999998 59999999999999998763 23
Q ss_pred CHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCCh------
Q 005554 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGP------ 549 (691)
Q Consensus 476 s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~------ 549 (691)
....+++-|+++....++.+.+|+||||||+++..||.+||++|+.|||++|.+........... ......|.
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~-~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEF-TKPPPEWYKALFLV 220 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhh-cCCChHHHhhhhhh
Confidence 35578999999999999999999999999999999999999999999999998765422100000 00000011
Q ss_pred -hhhhhHHHHHHHHh----hHHHHHHhhcCCCCccccHHH-HHHHHHh-cCCcchHHHHHHHhccc--cCcchHhhhcCC
Q 005554 550 -IRLGAQLLLFYLRL----NISNFVKQCYPTRRERADDWL-ISEMLRA-SYDPGVLVVLESIFSFK--LSLPLNYLLEGF 620 (691)
Q Consensus 550 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i 620 (691)
..+........... ....+-...+...+....++. .+..... ...+.....+..++... ...++.+.+..+
T Consensus 221 ~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l 300 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL 300 (365)
T ss_pred hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh
Confidence 00000000111111 111111111111122222333 2222222 22233333333333322 234555666666
Q ss_pred C--CcEEEEEeCCCCCCChhHHHHHHHH-hCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 621 K--EKVLIIQGIKDPISDSKSKVAMFKE-HCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 621 ~--~PvLiI~G~~D~~vp~~~~~~~~~~-~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+ +|+++|+|++|-+-... ..+.... ....++.+++ ++||++.+++|+.|++.|.++++..
T Consensus 301 ~~~~pv~fiyG~~dWmD~~~-g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRDWMDKNA-GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred ccCCCEEEEecCcccccchh-HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 6 99999999999765443 3333333 2344676666 9999999999999999999999864
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-25 Score=233.29 Aligned_cols=267 Identities=14% Similarity=0.141 Sum_probs=167.8
Q ss_pred EEcCeEEEEEEeCC----CCCeEEEEcCCCCChH-----------HHHHHH---HHHhcCCCEEEEeCCCC--CcCCCCC
Q 005554 412 RWNGYQIQYTVAGK----EGPAILLVHGFGAFLE-----------HYRDNI---YDIADGGNRVWAITLLG--FGRSEKP 471 (691)
Q Consensus 412 ~~~g~~i~y~~~g~----~~p~VlliHG~~~~~~-----------~~~~~~---~~L~~~G~~Vi~~D~~G--~G~S~~~ 471 (691)
.++|.+|+|..+|+ ++++|||+||++++.. .|..++ ..|...+|+||++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 46889999999984 2679999999999763 477775 25655679999999999 5655421
Q ss_pred ----C--------cCCCHHHHHHHHHHHHHHhCCcC-EEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCch-hh
Q 005554 472 ----N--------IVYTELMWSELLRDFTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY-SF 537 (691)
Q Consensus 472 ----~--------~~~s~~~~a~dl~~ll~~l~~~~-v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~-~~ 537 (691)
. ..++++++++++.+++++++.++ ++++||||||++++.+|.++|++|+++|++++........ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 1 24789999999999999999998 9999999999999999999999999999999875432211 00
Q ss_pred hhhh-hhhh--cCCh-----h---h-hhhHHHHHH--HHhhHHHHHHhhcCCCC-cc-----------ccHHHH----HH
Q 005554 538 LQFS-NERQ--ASGP-----I---R-LGAQLLLFY--LRLNISNFVKQCYPTRR-ER-----------ADDWLI----SE 587 (691)
Q Consensus 538 ~~~~-~~~~--~~~~-----~---~-~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~-----------~~~~~~----~~ 587 (691)
.... .... ..+. . . ......... ........+...+.... .. ...... ..
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 0000 0000 0000 0 0 000000000 00000111111121110 00 001111 11
Q ss_pred HHHhcCCcchHHHHHHHhccccC---cchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEE-----Ee-CC
Q 005554 588 MLRASYDPGVLVVLESIFSFKLS---LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR-----EL-DA 658 (691)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~-----~~-~~ 658 (691)
+...............+...... .+....+++|++|+|+|+|++|.++|++. .+.+.+.+++.+++ ++ ++
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~-~~~~a~~i~~~~~~v~~~~i~~~~ 330 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAE-SRELAKALPAAGLRVTYVEIESPY 330 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHH-HHHHHHHHhhcCCceEEEEeCCCC
Confidence 11111111111222222222111 24567889999999999999999999984 56567777777654 45 79
Q ss_pred CCCCCccChHHHHHHHHHHHH
Q 005554 659 GHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 659 GH~~~~e~pe~v~~~I~~fL~ 679 (691)
||++++|+|++|++.|.+||+
T Consensus 331 GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CcchhhcCHHHHHHHHHHHhC
Confidence 999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=216.93 Aligned_cols=240 Identities=19% Similarity=0.214 Sum_probs=152.8
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|... ..++++++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 48999999999999999999999986 599999999999998754 3567888887776543 36899999999999
Q ss_pred HHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh-hcCCCCccccHHHH
Q 005554 507 FVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ-CYPTRRERADDWLI 585 (691)
Q Consensus 507 ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 585 (691)
+++.+|.++|++|+++|++++............... ......+....... .......++.. .+............
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIK---PDVLTGFQQQLSDD-YQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCC---HHHHHHHHHHhhhh-HHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999999999988643221100000000 00000000000000 00011111110 11111000000011
Q ss_pred HHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCc
Q 005554 586 SEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHD 664 (691)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~ 664 (691)
............. .+..........+....+.++++|+++|+|++|.+++++. .+.+.+..++++++++ ++||++++
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~ 231 (245)
T TIGR01738 154 KQTLLARPTPNVQ-VLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKV-VPYLDKLAPHSELYIFAKAAHAPFL 231 (245)
T ss_pred HHHhhccCCCCHH-HHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHH-HHHHHHhCCCCeEEEeCCCCCCccc
Confidence 1111111111111 1111111112234455678999999999999999999874 5566777899999888 89999999
Q ss_pred cChHHHHHHHHHHH
Q 005554 665 EKPEEVNSIISEWI 678 (691)
Q Consensus 665 e~pe~v~~~I~~fL 678 (691)
|+|+++++.|.+|+
T Consensus 232 e~p~~~~~~i~~fi 245 (245)
T TIGR01738 232 SHAEAFCALLVAFK 245 (245)
T ss_pred cCHHHHHHHHHhhC
Confidence 99999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=228.86 Aligned_cols=262 Identities=13% Similarity=0.035 Sum_probs=167.5
Q ss_pred EEEEEEEcCeEEEEEEeCC--CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc------CCCHH
Q 005554 407 STRIWRWNGYQIQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI------VYTEL 478 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~--~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~------~~s~~ 478 (691)
+.+++..+|.+++|..+++ ++++||++||++++...|..++..|.+.||+|+++|+||||.|+.+.. ..+++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 3567778999999999874 367999999999999999999999998999999999999999976421 25889
Q ss_pred HHHHHHHHHHHHh----CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhh
Q 005554 479 MWSELLRDFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGA 554 (691)
Q Consensus 479 ~~a~dl~~ll~~l----~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (691)
++++|+..+++.+ +..+++++||||||.+++.+|.++|+.|+++|+++|............ ......
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~---------~~~~~~ 182 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWM---------ARRILN 182 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHH---------HHHHHH
Confidence 9999999999886 567899999999999999999999999999999998643211100000 000000
Q ss_pred HHHHHHHHhhHHH---HHHhhcCC--CCc--cccH----HHHHHHHHhcCC---cchHHHHHHHhccccCcchHhhhcCC
Q 005554 555 QLLLFYLRLNISN---FVKQCYPT--RRE--RADD----WLISEMLRASYD---PGVLVVLESIFSFKLSLPLNYLLEGF 620 (691)
Q Consensus 555 ~~~~~~~~~~~~~---~~~~~~~~--~~~--~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i 620 (691)
..... ...... ....+... ... .... ...+.+...... ............. .......+.++
T Consensus 183 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 258 (330)
T PRK10749 183 -WAEGH-PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA--GEQVLAGAGDI 258 (330)
T ss_pred -HHHHh-cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH--HHHHHhhccCC
Confidence 00000 000000 00000000 000 0001 111111111100 0011111111100 00122346789
Q ss_pred CCcEEEEEeCCCCCCChhHHHHHHHHh------CCCcEEEEe-CCCCCCCccCh---HHHHHHHHHHHHhh
Q 005554 621 KEKVLIIQGIKDPISDSKSKVAMFKEH------CAGIVIREL-DAGHCPHDEKP---EEVNSIISEWIVTI 681 (691)
Q Consensus 621 ~~PvLiI~G~~D~~vp~~~~~~~~~~~------~~~~~~~~~-~~GH~~~~e~p---e~v~~~I~~fL~~~ 681 (691)
++|+|+|+|++|.+++++......+.. .++++++++ ++||.++.|.+ +.+.+.|.+||++.
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999998544443322 145577777 99999999885 67889999999874
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=220.29 Aligned_cols=259 Identities=15% Similarity=0.137 Sum_probs=164.8
Q ss_pred EcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHh
Q 005554 413 WNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEV 491 (691)
Q Consensus 413 ~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l 491 (691)
-+|.+++|...+..+|+|||+||++.+...|.+++..|.+.||+|+++|+||||.|.... ..++++++++++.++++.+
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc
Confidence 468888888865568999999999999999999999998889999999999999886433 3489999999999999998
Q ss_pred C-CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHH
Q 005554 492 V-GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK 570 (691)
Q Consensus 492 ~-~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (691)
. .++++||||||||++++.++.++|++|+++|++++.... ............. .......... .... ...
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~-~g~~~~~~~~~~~-~~~~~~~~~~-----~~~~--~~~ 154 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK-LGFQTDEDMKDGV-PDLSEFGDVY-----ELGF--GLG 154 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC-CCCCHHHHHhccc-cchhhhccce-----eeee--ccC
Confidence 5 589999999999999999999999999999999874221 1100000000000 0000000000 0000 000
Q ss_pred hhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhc-----cccCcchHhhhcCC-CCcEEEEEeCCCCCCChhHHHHHH
Q 005554 571 QCYPTRRERADDWLISEMLRASYDPGVLVVLESIFS-----FKLSLPLNYLLEGF-KEKVLIIQGIKDPISDSKSKVAMF 644 (691)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~i-~~PvLiI~G~~D~~vp~~~~~~~~ 644 (691)
.................+.................. .............+ ++|+++|.|++|..+|++ .++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~-~~~~m 233 (273)
T PLN02211 155 PDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE-QQEAM 233 (273)
T ss_pred CCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH-HHHHH
Confidence 000000000111111111111110000000000000 00000111122345 789999999999999998 56667
Q ss_pred HHhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHHhh
Q 005554 645 KEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 645 ~~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+..+..+++.+++||.+++++|+++++.|.++....
T Consensus 234 ~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 234 IKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred HHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 7777788888889999999999999999999987654
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-23 Score=223.78 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=161.1
Q ss_pred EEEEEEeC--CCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCC-CH----HHHHHHHHHHHH
Q 005554 417 QIQYTVAG--KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY-TE----LMWSELLRDFTV 489 (691)
Q Consensus 417 ~i~y~~~g--~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~-s~----~~~a~dl~~ll~ 489 (691)
.+.+.... .++|+|||+||++++...|...+..|.+. |+|+++|+||||.|+.+...+ +. +.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 45544433 24789999999999999999999999874 999999999999998764322 11 235677888888
Q ss_pred HhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhH----------H---
Q 005554 490 EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ----------L--- 556 (691)
Q Consensus 490 ~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--- 556 (691)
.++.++++|+||||||.+++.+|.++|++|+++|++++.+..................+...+... .
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 889899999999999999999999999999999999987543321110000000000000000000 0
Q ss_pred HHHHHHhhHHHHHHhhcCCC------CccccHHHHHHHHHhcCCc-chHHHHHHHhcc--ccCcchHhhhcCCCCcEEEE
Q 005554 557 LLFYLRLNISNFVKQCYPTR------RERADDWLISEMLRASYDP-GVLVVLESIFSF--KLSLPLNYLLEGFKEKVLII 627 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLiI 627 (691)
...+.......+....+... .......+.+.+....... .....+...... ....+....+.++++|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 00000000111111111100 0001111111111111111 111111111111 12344555678899999999
Q ss_pred EeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhhCC
Q 005554 628 QGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESK 684 (691)
Q Consensus 628 ~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~~ 684 (691)
+|++|.+.+.. ..+..+...+.++++++ ++||++++|+|++|++.|.+|++.....
T Consensus 332 ~G~~D~i~~~~-~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 332 YGRHDWMNYEG-AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EeCCCCCCcHH-HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 99999877643 44544444456777777 9999999999999999999999876654
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=228.80 Aligned_cols=272 Identities=13% Similarity=0.093 Sum_probs=168.5
Q ss_pred EEEcCeEEEEEEeCC----CCCeEEEEcCCCCChHH-------------HHHHHH---HHhcCCCEEEEeCCCCC-cCCC
Q 005554 411 WRWNGYQIQYTVAGK----EGPAILLVHGFGAFLEH-------------YRDNIY---DIADGGNRVWAITLLGF-GRSE 469 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~----~~p~VlliHG~~~~~~~-------------~~~~~~---~L~~~G~~Vi~~D~~G~-G~S~ 469 (691)
..++|.+++|..+|. .+|+|||+||++++... |..++. .|...+|+||++|++|+ |.|.
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 355788999999985 26899999999999874 556652 34344799999999983 5453
Q ss_pred CCC--------------cCCCHHHHHHHHHHHHHHhCCcC-EEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCc
Q 005554 470 KPN--------------IVYTELMWSELLRDFTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPE 534 (691)
Q Consensus 470 ~~~--------------~~~s~~~~a~dl~~ll~~l~~~~-v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~ 534 (691)
.+. ..++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 321 15899999999999999999999 589999999999999999999999999999987543221
Q ss_pred hh-hhhh-hhhhh--cCCh---------hhhhhHHHHHH---HHhhHHHHHHhhcCCCC-c----------cccHHHHH-
Q 005554 535 YS-FLQF-SNERQ--ASGP---------IRLGAQLLLFY---LRLNISNFVKQCYPTRR-E----------RADDWLIS- 586 (691)
Q Consensus 535 ~~-~~~~-~~~~~--~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~----------~~~~~~~~- 586 (691)
.. .... ..... ..+. ........... ........+...+.... . ........
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 00 0000 00000 0000 00000000000 00000001111111100 0 00011110
Q ss_pred ---HHHHhcCCcchHHHHHHHhccccC----cchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCc----EEEE
Q 005554 587 ---EMLRASYDPGVLVVLESIFSFKLS----LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI----VIRE 655 (691)
Q Consensus 587 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~----~~~~ 655 (691)
.+...................... .+....+.+|++|+|+|+|++|.++|++. .+.+.+.++++ ++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~-~~~la~~i~~a~~~~~l~~ 346 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR-SREIVDALLAAGADVSYAE 346 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH-HHHHHHHHHhcCCCeEEEE
Confidence 111111111122222222222111 23567889999999999999999999984 55566666665 5554
Q ss_pred -e-CCCCCCCccChHHHHHHHHHHHHhhhC
Q 005554 656 -L-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 656 -~-~~GH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
+ ++||++++|+|+++++.|.+||++...
T Consensus 347 i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 347 IDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred eCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 4 799999999999999999999998653
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=225.29 Aligned_cols=256 Identities=30% Similarity=0.345 Sum_probs=159.1
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcC-CCEEEEeCCCCCc-CCCCCC-cCCCHHHHHHHHHHHHHHhCCcCEEEEEeC
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFG-RSEKPN-IVYTELMWSELLRDFTVEVVGEPVHLIGNS 502 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G-~S~~~~-~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS 502 (691)
.+++||++|||+++...|+.++..|.+. |++|+++|++|+| .|..+. ..|+..++++.+..++......+++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4889999999999999999999999876 5999999999999 444444 359999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCccccceEE---EecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcC---CC
Q 005554 503 IGGYFVAIVACLWPAVVKSVV---LINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYP---TR 576 (691)
Q Consensus 503 ~GG~ial~~A~~~P~~V~~lV---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 576 (691)
+||.+|+.+|+.+|+.|+++| ++++.....+...................................+..... ..
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 216 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTD 216 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccc
Confidence 999999999999999999999 555554332221100000000000000000000000000000000000000 00
Q ss_pred CccccHHHHHHHHHhcCCcchHHHHHHHhccccC--cchHhhhcCCC-CcEEEEEeCCCCCCChhHHHHHHHHhCCCcEE
Q 005554 577 RERADDWLISEMLRASYDPGVLVVLESIFSFKLS--LPLNYLLEGFK-EKVLIIQGIKDPISDSKSKVAMFKEHCAGIVI 653 (691)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~-~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~ 653 (691)
.....+....-................++..... ......++++. +|+|+|+|++|.++|.+.... +.+..|++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~-~~~~~pn~~~ 295 (326)
T KOG1454|consen 217 PSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE-LKKKLPNAEL 295 (326)
T ss_pred cccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH-HHhhCCCceE
Confidence 0111111111000000000000000011111111 22333556666 999999999999999995444 4554599999
Q ss_pred EEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 654 REL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 654 ~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
+++ ++||++++|.|++++..|..|+....
T Consensus 296 ~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 296 VEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred EEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 999 89999999999999999999998753
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=225.27 Aligned_cols=261 Identities=18% Similarity=0.196 Sum_probs=165.6
Q ss_pred EEEEEcCeEEEEEEeCCC-----CCeEEEEcCCCCCh-HHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHH
Q 005554 409 RIWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWS 481 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~-----~p~VlliHG~~~~~-~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a 481 (691)
.+...+|.+|+|..+++. +++|||+||++.+. ..|..++..|.++||+|+++|+||||.|+.+.. ..+++.++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~ 115 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVV 115 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHH
Confidence 455569999999876532 45699999998664 356677888998899999999999999975433 45888999
Q ss_pred HHHHHHHHHhCC------cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhH
Q 005554 482 ELLRDFTVEVVG------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 482 ~dl~~ll~~l~~------~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
+|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++......... ..+. . ..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~--~-~~ 183 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIR---------PPWP--I-PQ 183 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccC---------CchH--H-HH
Confidence 999999988753 3799999999999999999999999999999998643221100 0000 0 00
Q ss_pred HHHHHHHhhHHHHHHhhc-CCCCccc----cHHHHHHHHHh---cCC-cchHHHHHHHhccccCcchHhhhcCCCCcEEE
Q 005554 556 LLLFYLRLNISNFVKQCY-PTRRERA----DDWLISEMLRA---SYD-PGVLVVLESIFSFKLSLPLNYLLEGFKEKVLI 626 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 626 (691)
... ....+..... ....... .......+... ... ............. .......+..+++|+|+
T Consensus 184 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLi 256 (330)
T PLN02298 184 ILT-----FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV--TDYLGKKLKDVSIPFIV 256 (330)
T ss_pred HHH-----HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH--HHHHHHhhhhcCCCEEE
Confidence 000 0000000000 0000000 00000000000 000 0000001111110 00123456789999999
Q ss_pred EEeCCCCCCChhHHHHHHHHhC-CCcEEEEe-CCCCCCCccChH----HHHHHHHHHHHhhhCCCCCC
Q 005554 627 IQGIKDPISDSKSKVAMFKEHC-AGIVIREL-DAGHCPHDEKPE----EVNSIISEWIVTIESKVPAE 688 (691)
Q Consensus 627 I~G~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e~pe----~v~~~I~~fL~~~~~~~~~~ 688 (691)
|+|++|.++|++...+++.... ++++++++ ++||.+++++|+ ++.+.|.+||++......++
T Consensus 257 i~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 257 LHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred EecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999986655555543 57888887 899999998875 57788999999876544443
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-24 Score=218.99 Aligned_cols=262 Identities=19% Similarity=0.177 Sum_probs=163.1
Q ss_pred EEEEEcCeEEEEEEeCCC--CCeEEEEcCCCCCh-HHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc---CCCHHHHHH
Q 005554 409 RIWRWNGYQIQYTVAGKE--GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSE 482 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~--~p~VlliHG~~~~~-~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~---~~s~~~~a~ 482 (691)
++++++|.++.|...+.+ +++|||+||++++. ..|..+...|.+.||+|+++|+||||.|..+.. .++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 356778888888887643 68999999986554 455556666666689999999999999987542 378999999
Q ss_pred HHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHH--
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY-- 560 (691)
Q Consensus 483 dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 560 (691)
++.+++++++.++++++||||||.+++.+|..+|++|+++|++++............ ..................
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 161 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELN---RLRKELPPEVRAAIKRCEAS 161 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHH---HHHhhcChhHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999987542211100000 000000000000000000
Q ss_pred ---HHhhHHHHHHhhcC--CCCccccHHHHHHHHHhcCCcchHHHHHHHh--------ccccCcchHhhhcCCCCcEEEE
Q 005554 561 ---LRLNISNFVKQCYP--TRRERADDWLISEMLRASYDPGVLVVLESIF--------SFKLSLPLNYLLEGFKEKVLII 627 (691)
Q Consensus 561 ---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~i~~PvLiI 627 (691)
........+..... .................. . ......+. ......+....+.++++|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 237 (288)
T TIGR01250 162 GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGM-N---TNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLT 237 (288)
T ss_pred cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhcc-C---HHHHhcccCCccccccccccccCHHHHhhccCCCEEEE
Confidence 00000000000000 000000000000000000 0 00000000 0011223445678899999999
Q ss_pred EeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHH
Q 005554 628 QGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 628 ~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
+|++|.+ +++ ..+.+.+..++.+++++ ++||++++|+|+++++.|.+||+
T Consensus 238 ~G~~D~~-~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 238 VGEFDTM-TPE-AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ecCCCcc-CHH-HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 9999985 555 34566777788888887 89999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=212.92 Aligned_cols=225 Identities=27% Similarity=0.310 Sum_probs=150.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHH
Q 005554 430 ILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (691)
Q Consensus 430 VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~i 507 (691)
|||+||++++...|..+++.|. +||+|+++|+||+|.|+.+. ..++++++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 68999999999999998865 46899999999999999999999999999999999
Q ss_pred HHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHH
Q 005554 508 VAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE 587 (691)
Q Consensus 508 al~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (691)
++.++.++|++|+++|++++......... .................. ........+..... ......
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~ 146 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPS-----RSFGPSFIRRLLAWRSRS-LRRLASRFFYRWFD-------GDEPED 146 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHC-----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHT-------HHHHHH
T ss_pred ccccccccccccccceeeccccccccccc-----ccccchhhhhhhhccccc-cccccccccccccc-------cccccc
Confidence 99999999999999999998743211000 000000000000000000 00000011111110 000111
Q ss_pred HHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccC
Q 005554 588 MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEK 666 (691)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~ 666 (691)
.... ............ ....+....+..+++|+++|+|++|.+++.+ ..+.+.+..++++++++ ++||++++|+
T Consensus 147 ~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 221 (228)
T PF12697_consen 147 LIRS-SRRALAEYLRSN---LWQADLSEALPRIKVPVLVIHGEDDPIVPPE-SAEELADKLPNAELVVIPGAGHFLFLEQ 221 (228)
T ss_dssp HHHH-HHHHHHHHHHHH---HHHHHHHHHHHGSSSEEEEEEETTSSSSHHH-HHHHHHHHSTTEEEEEETTSSSTHHHHS
T ss_pred cccc-cccccccccccc---cccccccccccccCCCeEEeecCCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCccHHHC
Confidence 1100 000001111100 1112334567788999999999999999976 55667777789999888 7999999999
Q ss_pred hHHHHHH
Q 005554 667 PEEVNSI 673 (691)
Q Consensus 667 pe~v~~~ 673 (691)
|++++++
T Consensus 222 p~~~~~a 228 (228)
T PF12697_consen 222 PDEVAEA 228 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999874
|
... |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-23 Score=221.53 Aligned_cols=251 Identities=25% Similarity=0.313 Sum_probs=170.6
Q ss_pred EEEEcCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHH
Q 005554 410 IWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll 488 (691)
.+.+++.+++|...|++ +++|||+||++++...|..++..|.+. |+|+++|+||||.|.......+++++++++.+++
T Consensus 113 ~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 113 KARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFL 191 (371)
T ss_pred cceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 44567888999888853 789999999999999999999999875 9999999999999976656789999999999999
Q ss_pred HHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHH
Q 005554 489 VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNF 568 (691)
Q Consensus 489 ~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (691)
+.++..+++++||||||.+++.+|..+|+++.++|++++.......... ... .+.. .........+
T Consensus 192 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~--~~~--------~~~~----~~~~~~~~~~ 257 (371)
T PRK14875 192 DALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGD--YID--------GFVA----AESRRELKPV 257 (371)
T ss_pred HhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchh--HHH--------Hhhc----ccchhHHHHH
Confidence 9999899999999999999999999999999999999876432111000 000 0000 0000001111
Q ss_pred HHhhcCCCCccccHHHHHHHHHhcCCcchHHHHH----HHhc-cccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHH
Q 005554 569 VKQCYPTRRERADDWLISEMLRASYDPGVLVVLE----SIFS-FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643 (691)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~ 643 (691)
+...+. .........................+. ..+. .....+....+.++++|+|+|+|++|.++|++..
T Consensus 258 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~--- 333 (371)
T PRK14875 258 LELLFA-DPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA--- 333 (371)
T ss_pred HHHHhc-ChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHH---
Confidence 111111 111111222222222111111111111 1111 1112234456778999999999999999998643
Q ss_pred HHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHh
Q 005554 644 FKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 644 ~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
....++.++.++ ++||++++++|+++++.|.+||++
T Consensus 334 -~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 334 -QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred -hhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 233456788777 799999999999999999999975
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=207.13 Aligned_cols=241 Identities=18% Similarity=0.209 Sum_probs=156.3
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHH-HHHHHHHhCCcCEEEEEeCh
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSEL-LRDFTVEVVGEPVHLIGNSI 503 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~d-l~~ll~~l~~~~v~lvGhS~ 503 (691)
+|+|||+||++++...|.+++..|. .||+|+++|+||+|.|+.+. ..+++++++++ +..+++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4799999999999999999999998 68999999999999998754 35788889988 78888888889999999999
Q ss_pred hHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcC----CCCcc
Q 005554 504 GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYP----TRRER 579 (691)
Q Consensus 504 GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 579 (691)
||.+++.+|.++|+.|+++|++++............. ......+. ..........+...+.. .....
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAAR-RQNDEQLA--------QRFEQEGLEAFLDDWYQQPLFASQKN 150 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhh-hhcchhhh--------hHHHhcCccHHHHHHhcCceeeeccc
Confidence 9999999999999999999999886432211100000 00000000 00000001111111110 00000
Q ss_pred ccHHHHHHHHHhcCCcchHHHHHHHhc--cccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-
Q 005554 580 ADDWLISEMLRASYDPGVLVVLESIFS--FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL- 656 (691)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~- 656 (691)
........+...............+.. .....+....+..+++|+++|+|++|..++ + ..+.+.+..++.+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~~~~~~~~~~~~ 228 (251)
T TIGR03695 151 LPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQKLLPNLTLVIIA 228 (251)
T ss_pred CChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHhcCCCCcEEEEc
Confidence 111111111111111111111111111 111123334567899999999999998764 3 34556777788888888
Q ss_pred CCCCCCCccChHHHHHHHHHHHH
Q 005554 657 DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 657 ~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
++||++++|+|+++++.|.+||+
T Consensus 229 ~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 229 NAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCCcCccChHHHHHHHHHHhC
Confidence 78999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=187.19 Aligned_cols=252 Identities=19% Similarity=0.210 Sum_probs=178.2
Q ss_pred CceEEEEEEEcCeEEEEEEeCCCCCeEEEEcCC-CCChHHHHHHHHHHhcC-CCEEEEeCCCCCcCCCCCCcCCCHHHH-
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGF-GAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMW- 480 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~~p~VlliHG~-~~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~~~~s~~~~- 480 (691)
..++..-+.++|.+|+|..+|.+...||+++|. |+....|.+.+..|-+. .+.|+++|.||+|.|.+|...+..+.+
T Consensus 19 ~~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~ 98 (277)
T KOG2984|consen 19 SDYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFM 98 (277)
T ss_pred chhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHH
Confidence 345556788999999999999767789999996 55677888888777654 389999999999999998877766554
Q ss_pred --HHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHH
Q 005554 481 --SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLL 558 (691)
Q Consensus 481 --a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (691)
+++..++++.+..+++.++|+|=||..++..|+++++.|.++|+.++...........-........|.......
T Consensus 99 ~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P--- 175 (277)
T KOG2984|consen 99 KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQP--- 175 (277)
T ss_pred HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcch---
Confidence 556667889999999999999999999999999999999999999886443221110000000000111100000
Q ss_pred HHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChh
Q 005554 559 FYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638 (691)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~ 638 (691)
+...+. + +.+...+. .+...+..+..+....-....+.+++||+||++|+.|++++..
T Consensus 176 ----------~e~~Yg--~----e~f~~~wa------~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~ 233 (277)
T KOG2984|consen 176 ----------YEDHYG--P----ETFRTQWA------AWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDP 233 (277)
T ss_pred ----------HHHhcC--H----HHHHHHHH------HHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCC
Confidence 000111 0 01111111 1122223333332222245578899999999999999999987
Q ss_pred HHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 639 SKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
...++....+.+++.+. +++|.+++.-+++|+..+.+||++.
T Consensus 234 -hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 234 -HVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred -CccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 46788888899999998 8999999999999999999999874
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-22 Score=206.95 Aligned_cols=119 Identities=17% Similarity=0.103 Sum_probs=99.9
Q ss_pred EEEE-cCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHHHH
Q 005554 410 IWRW-NGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLR 485 (691)
Q Consensus 410 ~~~~-~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~dl~ 485 (691)
++.. +|.+|+|...|++ +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+. ..++.+++++++.
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 86 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIE 86 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 4444 5789999998853 78999999987765443 3444555567999999999999998654 2467889999999
Q ss_pred HHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 486 ~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
.++++++.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 87 ~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 87 KLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 99999999999999999999999999999999999999998764
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=205.92 Aligned_cols=268 Identities=20% Similarity=0.226 Sum_probs=175.4
Q ss_pred eEEEEEEEcCeEEEEEEeCCCC---CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCC-CCCc-CCCHHHH
Q 005554 406 YSTRIWRWNGYQIQYTVAGKEG---PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE-KPNI-VYTELMW 480 (691)
Q Consensus 406 ~~~~~~~~~g~~i~y~~~g~~~---p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~-~~~~-~~s~~~~ 480 (691)
.+..+...+|..++|..+.... .+||++||++.+..-|..++..|...||.|+++|+||||.|. ...+ .-++.++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 3456788899999999887542 589999999999999999999999999999999999999997 4333 3348899
Q ss_pred HHHHHHHHHHhC----CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHH
Q 005554 481 SELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (691)
Q Consensus 481 a~dl~~ll~~l~----~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (691)
.+|+..+++... ..+++++||||||.|++.++.+++..|+++||.+|...... .....................
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-~~~~~~~~~~~~~~~~~~~p~- 167 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-AILRLILARLALKLLGRIRPK- 167 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-hHHHHHHHHHhcccccccccc-
Confidence 999999998875 37899999999999999999999999999999999855432 000000000000000000000
Q ss_pred HHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcC----CcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCC
Q 005554 557 LLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY----DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD 632 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D 632 (691)
+.... . ....... ....-+....+.+..... ..........+.... .........+++|+|+++|++|
T Consensus 168 ---~~~~~-~-~~~~~~~-~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~--~~~~~~~~~~~~PvLll~g~~D 239 (298)
T COG2267 168 ---LPVDS-N-LLEGVLT-DDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR--VPALRDAPAIALPVLLLQGGDD 239 (298)
T ss_pred ---cccCc-c-cccCcCc-chhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc--ccchhccccccCCEEEEecCCC
Confidence 00000 0 0000000 000011122222221110 011111111111111 1223345678999999999999
Q ss_pred CCCC-hhHHHHHHHHhC-CCcEEEEe-CCCCCCCccC-h--HHHHHHHHHHHHhhhC
Q 005554 633 PISD-SKSKVAMFKEHC-AGIVIREL-DAGHCPHDEK-P--EEVNSIISEWIVTIES 683 (691)
Q Consensus 633 ~~vp-~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e~-p--e~v~~~I~~fL~~~~~ 683 (691)
.+++ .+...++++... ++.+++++ ++.|.++.|. . +++.+.+.+|+.+...
T Consensus 240 ~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 240 RVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999 676777777665 66778877 9999999986 5 8999999999988654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-21 Score=208.10 Aligned_cols=255 Identities=19% Similarity=0.222 Sum_probs=162.9
Q ss_pred EEEEcCeEEEEEEeCCC----CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHHHHH
Q 005554 410 IWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELL 484 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~~----~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~dl 484 (691)
+..-++..++|..+.+. +++|||+||++++...|..++..|.++||+|+++|+||||.|+.... ..+.+.+.+|+
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl 194 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDT 194 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 33446678888887552 46899999999999999999999999999999999999999987543 45788889999
Q ss_pred HHHHHHhCC----cCEEEEEeChhHHHHHHHHHhCcc---ccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHH
Q 005554 485 RDFTVEVVG----EPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL 557 (691)
Q Consensus 485 ~~ll~~l~~----~~v~lvGhS~GG~ial~~A~~~P~---~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (691)
.++++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|.....+..... ......
T Consensus 195 ~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~------------~~~~~l- 260 (395)
T PLN02652 195 EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV------------GAVAPI- 260 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH------------HHHHHH-
Confidence 999988753 47999999999999998764 564 799999998864322110000 000000
Q ss_pred HHHHHhhHHHHHHhhcCCC---CccccHHHHHHHHHhcCCcchH--HHHHHHhccccCcchHhhhcCCCCcEEEEEeCCC
Q 005554 558 LFYLRLNISNFVKQCYPTR---RERADDWLISEMLRASYDPGVL--VVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD 632 (691)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D 632 (691)
.......+........ ...........+.......+.. ......... .......+.++++|+|+|+|++|
T Consensus 261 ---~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~--~~~l~~~L~~I~vPvLIi~G~~D 335 (395)
T PLN02652 261 ---FSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRI--SSYLTRNFKSVTVPFMVLHGTAD 335 (395)
T ss_pred ---HHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHH--HHHHHhhcccCCCCEEEEEeCCC
Confidence 0000000000000000 0000011111110000000000 000011110 01123456789999999999999
Q ss_pred CCCChhHHHHHHHHhC-CCcEEEEe-CCCCCCCcc-ChHHHHHHHHHHHHhhhC
Q 005554 633 PISDSKSKVAMFKEHC-AGIVIREL-DAGHCPHDE-KPEEVNSIISEWIVTIES 683 (691)
Q Consensus 633 ~~vp~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e-~pe~v~~~I~~fL~~~~~ 683 (691)
.++|++...+++++.. ++.+++++ +++|.++.| +++++.+.|.+||+....
T Consensus 336 ~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 336 RVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9999987766666644 35677777 889999887 699999999999997654
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.6e-22 Score=242.11 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=165.7
Q ss_pred EEEEEeCC--CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--------cCCCHHHHHHHHHHH
Q 005554 418 IQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--------IVYTELMWSELLRDF 487 (691)
Q Consensus 418 i~y~~~g~--~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--------~~~s~~~~a~dl~~l 487 (691)
++|...|. ++++|||+||++++...|..++..|.+. |+|+++|+||||.|..+. ..++++.+++++..+
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 45556664 3689999999999999999999999874 999999999999997542 257899999999999
Q ss_pred HHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHH
Q 005554 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 488 l~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
+++++.++++|+||||||.+++.+|.++|++|+++|++++........ ...... ......... ........
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~-~~~~~~----~~~~~~~~~----l~~~g~~~ 1509 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEV-ARKIRS----AKDDSRARM----LIDHGLEI 1509 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchH-HHHHHh----hhhhHHHHH----HHhhhHHH
Confidence 999999999999999999999999999999999999998753321110 000000 000000000 00001111
Q ss_pred HHHhhcCCC---CccccHHHHHHHHHhcCCcc---hHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHH
Q 005554 568 FVKQCYPTR---RERADDWLISEMLRASYDPG---VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641 (691)
Q Consensus 568 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 641 (691)
++..++... .................... ....+.. .......+....+.++++|+|+|+|++|..++ + ..
T Consensus 1510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~-~a 1586 (1655)
T PLN02980 1510 FLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSD-LSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-Q-IA 1586 (1655)
T ss_pred HHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHH-hhhcccchHHHHHhhCCCCEEEEEECCCCccH-H-HH
Confidence 111111100 00000111111111111111 1111111 11112234456789999999999999999875 3 23
Q ss_pred HHHHHhCCC------------cEEEEe-CCCCCCCccChHHHHHHHHHHHHhhhCCCCC
Q 005554 642 AMFKEHCAG------------IVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESKVPA 687 (691)
Q Consensus 642 ~~~~~~~~~------------~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~~~~~ 687 (691)
+.+.+.+++ ++++++ ++||++++|+|+++++.|.+||++....+.+
T Consensus 1587 ~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~~ 1645 (1655)
T PLN02980 1587 QKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSSTP 1645 (1655)
T ss_pred HHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCCC
Confidence 344444444 467777 9999999999999999999999987765443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=227.98 Aligned_cols=267 Identities=17% Similarity=0.108 Sum_probs=163.1
Q ss_pred EEEEEEcCeEEEEEEeCCC-CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHHH
Q 005554 408 TRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELL 484 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~~-~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~dl 484 (691)
..++..+|.+|+|...|++ +|+|||+||++++...|.++++.|. .||+|+++|+||||.|+.+. ..++++++++|+
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 4567889999999999864 7899999999999999999999995 57999999999999998643 468999999999
Q ss_pred HHHHHHhCCcC-EEEEEeChhHHHHHHHHHh--CccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHH
Q 005554 485 RDFTVEVVGEP-VHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561 (691)
Q Consensus 485 ~~ll~~l~~~~-v~lvGhS~GG~ial~~A~~--~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (691)
..++++++..+ ++|+||||||.+++.++.+ .++++..++.++++...... .......................
T Consensus 84 ~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 159 (582)
T PRK05855 84 AAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVG----FWLRSGLRRPTPRRLARALGQLL 159 (582)
T ss_pred HHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHH----HHHhhcccccchhhhhHHHHHHh
Confidence 99999998755 9999999999999988876 24455555555443110000 00000000000000000000000
Q ss_pred HhhHHHHHHhhcCCCCc-----cccHHHHHHHHHhcC---C---------cchHHHHHHHhccccCcchHhhhcCCCCcE
Q 005554 562 RLNISNFVKQCYPTRRE-----RADDWLISEMLRASY---D---------PGVLVVLESIFSFKLSLPLNYLLEGFKEKV 624 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 624 (691)
.......+. .+.... ....... ....... . .........................+++|+
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 236 (582)
T PRK05855 160 RSWYIYLFH--LPVLPELLWRLGLGRAWP-RLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPV 236 (582)
T ss_pred hhHHHHHHh--CCCCcHHHhccchhhHHH-HhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCce
Confidence 000000000 000000 0000000 0000000 0 000000000000000000111244589999
Q ss_pred EEEEeCCCCCCChhHHHHHHHHhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHHhhhC
Q 005554 625 LIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 625 LiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
|+|+|++|.+++++. .+.+.+..++..++++++||++++|+|+++++.|.+|++....
T Consensus 237 lii~G~~D~~v~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 237 QLIVPTGDPYVRPAL-YDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred EEEEeCCCcccCHHH-hccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhccC
Confidence 999999999999874 4556666788888888889999999999999999999998653
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.2e-22 Score=210.43 Aligned_cols=244 Identities=14% Similarity=0.148 Sum_probs=147.9
Q ss_pred CCCeEEEEcCCCCChH-HH-HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC----cCEEEE
Q 005554 426 EGPAILLVHGFGAFLE-HY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG----EPVHLI 499 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~-~~-~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~----~~v~lv 499 (691)
++|+||++||+++++. .| ..++..+.++||+|+++|+||||.|......+....+++|+.+++++++. .+++++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lv 178 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAA 178 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEE
Confidence 4789999999977653 24 56777777889999999999999997644333345667788888877765 589999
Q ss_pred EeChhHHHHHHHHHhCccc--cceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCC
Q 005554 500 GNSIGGYFVAIVACLWPAV--VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRR 577 (691)
Q Consensus 500 GhS~GG~ial~~A~~~P~~--V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (691)
||||||.+++.++.++|++ |.++|+++++...... . ...... ................... ....+....
T Consensus 179 G~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~--~----~~~~~~-~~~~y~~~~~~~l~~~~~~-~~~~~~~~~ 250 (388)
T PLN02511 179 GWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA--D----EDFHKG-FNNVYDKALAKALRKIFAK-HALLFEGLG 250 (388)
T ss_pred EechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH--H----HHHhcc-HHHHHHHHHHHHHHHHHHH-HHHHHhhCC
Confidence 9999999999999999987 8898888765331000 0 000000 0000000000000000000 000000000
Q ss_pred ccccH----------HHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHh
Q 005554 578 ERADD----------WLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH 647 (691)
Q Consensus 578 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~ 647 (691)
..... .+.+.+........ ....++ ...+....+.+|++|+|+|+|++|+++|.+.......+.
T Consensus 251 ~~~~~~~~~~~~~~~~fd~~~t~~~~gf~---~~~~yy---~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~ 324 (388)
T PLN02511 251 GEYNIPLVANAKTVRDFDDGLTRVSFGFK---SVDAYY---SNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA 324 (388)
T ss_pred CccCHHHHHhCCCHHHHHHhhhhhcCCCC---CHHHHH---HHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc
Confidence 00000 00000000000000 000010 111233467899999999999999999986433345566
Q ss_pred CCCcEEEEe-CCCCCCCccChHH------HHHHHHHHHHhhhC
Q 005554 648 CAGIVIREL-DAGHCPHDEKPEE------VNSIISEWIVTIES 683 (691)
Q Consensus 648 ~~~~~~~~~-~~GH~~~~e~pe~------v~~~I~~fL~~~~~ 683 (691)
.++++++++ ++||+.++|+|+. +.+.|.+||+....
T Consensus 325 ~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 325 NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 799999888 8999999999876 58999999987654
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=188.36 Aligned_cols=256 Identities=19% Similarity=0.214 Sum_probs=170.2
Q ss_pred EEEEEcCeEEEEEEeCCC-----CCeEEEEcCCCCCh-HHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHH
Q 005554 409 RIWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWS 481 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~-----~p~VlliHG~~~~~-~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a 481 (691)
.+...+|.++++..+-+. .-.|+++||++... ..|..++..|+..||.|+++|++|||.|++... --+++..+
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v 110 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVV 110 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHH
Confidence 456668889999888652 23799999998875 788889999999999999999999999997653 44788889
Q ss_pred HHHHHHHHHhC------CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhH
Q 005554 482 ELLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 482 ~dl~~ll~~l~------~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
+|+..+.+... ..+.+|+||||||.|++.++.++|+...|+|+++|.....+..... +.......
T Consensus 111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~---------p~v~~~l~ 181 (313)
T KOG1455|consen 111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPH---------PPVISILT 181 (313)
T ss_pred HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCC---------cHHHHHHH
Confidence 99998887643 3689999999999999999999999999999999976544332111 11000000
Q ss_pred HHHHHHHhhHHHHHHhh--cCCC--Cc--cccHHHHHHHHHhcCC-cchHHHHHHHhccccCcchHhhhcCCCCcEEEEE
Q 005554 556 LLLFYLRLNISNFVKQC--YPTR--RE--RADDWLISEMLRASYD-PGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQ 628 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~--~~~~--~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 628 (691)
. +..++..+ .+.. .. -.+.+........... .+....-...--.....++...+.++++|.+++|
T Consensus 182 ~--------l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilH 253 (313)
T KOG1455|consen 182 L--------LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILH 253 (313)
T ss_pred H--------HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEe
Confidence 0 00111111 1111 00 0011111111111110 1110111111111123345667889999999999
Q ss_pred eCCCCCCChhHHHHHHHHhC-CCcEEEEe-CCCCCCCc----cChHHHHHHHHHHHHhh
Q 005554 629 GIKDPISDSKSKVAMFKEHC-AGIVIREL-DAGHCPHD----EKPEEVNSIISEWIVTI 681 (691)
Q Consensus 629 G~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~----e~pe~v~~~I~~fL~~~ 681 (691)
|+.|.++.++...++++... .+.++.+. |.-|.++. |+-+.|...|.+||++.
T Consensus 254 G~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 254 GTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999997777776665 56677777 88998875 33577888999999864
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=196.70 Aligned_cols=267 Identities=16% Similarity=0.121 Sum_probs=166.2
Q ss_pred EcCeEEEEEEeCCC----CCeEEEEcCCCCChH-------------HHHHHHH---HHhcCCCEEEEeCCCCCcCCCCC-
Q 005554 413 WNGYQIQYTVAGKE----GPAILLVHGFGAFLE-------------HYRDNIY---DIADGGNRVWAITLLGFGRSEKP- 471 (691)
Q Consensus 413 ~~g~~i~y~~~g~~----~p~VlliHG~~~~~~-------------~~~~~~~---~L~~~G~~Vi~~D~~G~G~S~~~- 471 (691)
..+.+|.|..+|.- .++||++|++++++. .|..++- .|-...|.||++|..|-|.|..|
T Consensus 38 l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 38 IPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 36788999999952 579999999988642 2555543 24334599999999987753211
Q ss_pred --------------------CcCCCHHHHHHHHHHHHHHhCCcCEE-EEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 472 --------------------NIVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 472 --------------------~~~~s~~~~a~dl~~ll~~l~~~~v~-lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
...++++++++++..+++++++++++ ++||||||++++.+|.++|++|+++|++++...
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 12378999999999999999999986 999999999999999999999999999988654
Q ss_pred CCCch--hhhhhhhh---hhcCC-----------hhhhhhHHHHHHHHhhHHHHHHhhcCCCC-c------------ccc
Q 005554 531 VIPEY--SFLQFSNE---RQASG-----------PIRLGAQLLLFYLRLNISNFVKQCYPTRR-E------------RAD 581 (691)
Q Consensus 531 ~~~~~--~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~ 581 (691)
..+.. ........ ....| ...+...............++...+.... . ...
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 33221 11110000 00000 00000000000011111122222111110 0 001
Q ss_pred HHHH---HHHHHhcCCcchHHHHHHHhcccc---CcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCC----Cc
Q 005554 582 DWLI---SEMLRASYDPGVLVVLESIFSFKL---SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA----GI 651 (691)
Q Consensus 582 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~----~~ 651 (691)
.++. +..........+......+..+.. ..+....+..+++|+|+|+|+.|.++|++.. +.+.+.++ ++
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~-~~la~~lp~~~~~a 356 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYN-YKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH-HHHHHHhhhcCCCe
Confidence 1111 111111222223333333333321 1246678889999999999999999999854 44555554 68
Q ss_pred EEEEe-C-CCCCCCccChHHHHHHHHHHHHh
Q 005554 652 VIREL-D-AGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 652 ~~~~~-~-~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+++++ + +||++++|+|+++++.|.+||++
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 88877 4 89999999999999999999975
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=170.84 Aligned_cols=222 Identities=19% Similarity=0.220 Sum_probs=154.0
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh---CCcCEEEEEeCh
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV---VGEPVHLIGNSI 503 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l---~~~~v~lvGhS~ 503 (691)
+.+|||+|||.++....+.+.+.|.++||.|++|.+||||.....--..+.++|-+++.+..+.| +.+.|.++|.||
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 47999999999999999999999999999999999999997754445778999988888876665 458899999999
Q ss_pred hHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHH
Q 005554 504 GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583 (691)
Q Consensus 504 GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (691)
||.+++.+|..+| ++++|.++++....... ..+..+. ... .-..+. .....+.
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~k~~~-----------~iie~~l----~y~------~~~kk~----e~k~~e~ 147 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-----------IIIEGLL----EYF------RNAKKY----EGKDQEQ 147 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCcccccch-----------hhhHHHH----HHH------HHhhhc----cCCCHHH
Confidence 9999999999999 89999999875422110 0000000 000 001111 1111122
Q ss_pred HHHHHHHhcC-CcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCC-CcEEEEe-CCCC
Q 005554 584 LISEMLRASY-DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA-GIVIREL-DAGH 660 (691)
Q Consensus 584 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~-~~~~~~~-~~GH 660 (691)
+.+++..... .......+..+.. +....+..|..|+++++|.+|+.+|.+...-++....+ ..++.++ ++||
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~i~-----~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgH 222 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLKKLIK-----DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGH 222 (243)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHH-----HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCc
Confidence 2222221111 1111111111111 23345778999999999999999999976666666654 4567777 8999
Q ss_pred CCCccC-hHHHHHHHHHHHHh
Q 005554 661 CPHDEK-PEEVNSIISEWIVT 680 (691)
Q Consensus 661 ~~~~e~-pe~v~~~I~~fL~~ 680 (691)
.+..+. .+++.+.|..||+.
T Consensus 223 VIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 223 VITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred eeecchhHHHHHHHHHHHhhC
Confidence 888765 79999999999973
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-20 Score=181.30 Aligned_cols=245 Identities=19% Similarity=0.265 Sum_probs=161.6
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcC-CCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhC----CcCEEEEE
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV----GEPVHLIG 500 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~----~~~v~lvG 500 (691)
..|+++++||+.++.+.|+.+...|+.. |-.|+++|.|.||.|.... .++.+.+++|+..+++..+ ..+++++|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 4899999999999999999999999875 6799999999999997644 5668999999999999885 47899999
Q ss_pred eChhH-HHHHHHHHhCccccceEEEecCCCCCCCchh--hhhhhhhhhc--------CChhhhhhHHHHHHHHhhHHHHH
Q 005554 501 NSIGG-YFVAIVACLWPAVVKSVVLINSAGNVIPEYS--FLQFSNERQA--------SGPIRLGAQLLLFYLRLNISNFV 569 (691)
Q Consensus 501 hS~GG-~ial~~A~~~P~~V~~lVll~~~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 569 (691)
||||| .+++..+..+|+.+..+|+++-++...+... .......... .........+...........++
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi 209 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFI 209 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHH
Confidence 99999 8888888899999999999987754322211 1111111000 11111111111111112222222
Q ss_pred HhhcCCCC-ccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhC
Q 005554 570 KQCYPTRR-ERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC 648 (691)
Q Consensus 570 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~ 648 (691)
...+.... .....| ..........+..+.......+.. . .....|||++.|.++.+++.+ ....+++.+
T Consensus 210 ~~nl~~~~~~~s~~w-------~~nl~~i~~~~~~~~~~s~~~~l~-~-~~~~~pvlfi~g~~S~fv~~~-~~~~~~~~f 279 (315)
T KOG2382|consen 210 LTNLKKSPSDGSFLW-------RVNLDSIASLLDEYEILSYWADLE-D-GPYTGPVLFIKGLQSKFVPDE-HYPRMEKIF 279 (315)
T ss_pred HHhcCcCCCCCceEE-------EeCHHHHHHHHHHHHhhccccccc-c-cccccceeEEecCCCCCcChh-HHHHHHHhc
Confidence 22221100 000000 000001111122211011111111 1 667889999999999999998 456788899
Q ss_pred CCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 649 AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 649 ~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
|+++++.+ ++||++|+|+|+++.+.|.+|+.+.
T Consensus 280 p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 280 PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999 5999999999999999999999864
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=190.07 Aligned_cols=254 Identities=17% Similarity=0.164 Sum_probs=154.0
Q ss_pred EEcCeEEEEEEeCCC--CCeEEEEcCCCCChH-HH-------------------------HHHHHHHhcCCCEEEEeCCC
Q 005554 412 RWNGYQIQYTVAGKE--GPAILLVHGFGAFLE-HY-------------------------RDNIYDIADGGNRVWAITLL 463 (691)
Q Consensus 412 ~~~g~~i~y~~~g~~--~p~VlliHG~~~~~~-~~-------------------------~~~~~~L~~~G~~Vi~~D~~ 463 (691)
..+|.+|++..+.++ +.+|+++||++.+.. .| ..+++.|.++||+|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 347888888887643 558999999998875 21 35799999999999999999
Q ss_pred CCcCCCCCCc--C--CCHHHHHHHHHHHHHHhC------------------------CcCEEEEEeChhHHHHHHHHHhC
Q 005554 464 GFGRSEKPNI--V--YTELMWSELLRDFTVEVV------------------------GEPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 464 G~G~S~~~~~--~--~s~~~~a~dl~~ll~~l~------------------------~~~v~lvGhS~GG~ial~~A~~~ 515 (691)
|||.|..... . .+++++++|+..+++.+. ..|++|+||||||.+++.++..+
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 9999985421 1 378889999999987642 35799999999999999998766
Q ss_pred cc--------ccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhc-CC-CCccccHHHH
Q 005554 516 PA--------VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY-PT-RRERADDWLI 585 (691)
Q Consensus 516 P~--------~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 585 (691)
++ .++++|+++|........... ..........+... . ..+..... .. .....+....
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-------~~~~~~~~~~l~~~-~----~~~~p~~~~~~~~~~~~~~~~~ 231 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMISIKSVGSDD-------SFKFKYFYLPVMNF-M----SRVFPTFRISKKIRYEKSPYVN 231 (332)
T ss_pred ccccccccccccceEEEeccceEEecccCCC-------cchhhhhHHHHHHH-H----HHHCCcccccCccccccChhhh
Confidence 42 589999988863211000000 00000000000000 0 00000000 00 0000011111
Q ss_pred HHHHHhcC--C-cchHHHHHHHhccccCcchHhhhcCC--CCcEEEEEeCCCCCCChhHHHHHHHHhC-CCcEEEEe-CC
Q 005554 586 SEMLRASY--D-PGVLVVLESIFSFKLSLPLNYLLEGF--KEKVLIIQGIKDPISDSKSKVAMFKEHC-AGIVIREL-DA 658 (691)
Q Consensus 586 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLiI~G~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~~ 658 (691)
+.+..... . .........++.... .....+..+ ++|+|+|+|++|.+++++.....++... ++.+++++ ++
T Consensus 232 ~~~~~Dp~~~~~~~s~~~~~~l~~~~~--~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~ 309 (332)
T TIGR01607 232 DIIKFDKFRYDGGITFNLASELIKATD--TLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDM 309 (332)
T ss_pred hHHhcCccccCCcccHHHHHHHHHHHH--HHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCC
Confidence 11111110 0 001111122221111 011123444 7999999999999999986666555543 57787777 89
Q ss_pred CCCCCccC-hHHHHHHHHHHHH
Q 005554 659 GHCPHDEK-PEEVNSIISEWIV 679 (691)
Q Consensus 659 GH~~~~e~-pe~v~~~I~~fL~ 679 (691)
+|.++.|. ++++.+.|.+||+
T Consensus 310 ~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 310 DHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCccCCCHHHHHHHHHHHhh
Confidence 99999986 7999999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-17 Score=178.92 Aligned_cols=228 Identities=16% Similarity=0.137 Sum_probs=143.6
Q ss_pred cCeEEEEEEeC----CCCCeEEEEcCCCCCh-HHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHH
Q 005554 414 NGYQIQYTVAG----KEGPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 414 ~g~~i~y~~~g----~~~p~VlliHG~~~~~-~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll 488 (691)
+|.+|...... .+.|+||++||+++.. +.|..++..|+++||+|+++|+||+|.|.......+.......+.+++
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l 256 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNAL 256 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHH
Confidence 45466644321 2356777777776653 578888899999999999999999999975332234444555666666
Q ss_pred HHh---CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhH
Q 005554 489 VEV---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNI 565 (691)
Q Consensus 489 ~~l---~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (691)
... +.+++.++||||||.+++.+|..+|++|+++|+++++....... . ...... ....
T Consensus 257 ~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~-------~---~~~~~~---------p~~~ 317 (414)
T PRK05077 257 PNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD-------P---KRQQQV---------PEMY 317 (414)
T ss_pred HhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc-------h---hhhhhc---------hHHH
Confidence 554 45789999999999999999999999999999998864211000 0 000000 0000
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHH
Q 005554 566 SNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK 645 (691)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~ 645 (691)
...+...+.... .....+... +..+.... ......++++|+|+|+|++|.++|++. .+.+.
T Consensus 318 ~~~la~~lg~~~-~~~~~l~~~----------------l~~~sl~~-~~~l~~~i~~PvLiI~G~~D~ivP~~~-a~~l~ 378 (414)
T PRK05077 318 LDVLASRLGMHD-ASDEALRVE----------------LNRYSLKV-QGLLGRRCPTPMLSGYWKNDPFSPEED-SRLIA 378 (414)
T ss_pred HHHHHHHhCCCC-CChHHHHHH----------------hhhccchh-hhhhccCCCCcEEEEecCCCCCCCHHH-HHHHH
Confidence 111111111100 000111110 00010000 000125789999999999999999985 45667
Q ss_pred HhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHHhh
Q 005554 646 EHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 646 ~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
...++.++++++.. ++.+.++++.+.|.+||++.
T Consensus 379 ~~~~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 379 SSSADGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred HhCCCCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 77889998888433 56789999999999999875
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-18 Score=180.34 Aligned_cols=241 Identities=15% Similarity=0.146 Sum_probs=139.5
Q ss_pred CCeEEEEcCCCCChH--HHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCC---CHHHHHHHHHHHHHHhCCcCEEEEE
Q 005554 427 GPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVY---TELMWSELLRDFTVEVVGEPVHLIG 500 (691)
Q Consensus 427 ~p~VlliHG~~~~~~--~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~---s~~~~a~dl~~ll~~l~~~~v~lvG 500 (691)
+|+||++||++++.. .+..++..|.++||+|+++|+||||.+.... ..+ ..+|....+..+.+.++..+++++|
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG 137 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVG 137 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEE
Confidence 689999999987633 3556889999999999999999999875432 112 2344444444444556667899999
Q ss_pred eChhHHHHHHHHHhCccc--cceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCc
Q 005554 501 NSIGGYFVAIVACLWPAV--VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRE 578 (691)
Q Consensus 501 hS~GG~ial~~A~~~P~~--V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (691)
|||||.+++.+++.+++. ++++|+++++........ ... .........................+.. ..
T Consensus 138 ~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~--~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~- 208 (324)
T PRK10985 138 YSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY--RME-----QGFSRVYQRYLLNLLKANAARKLAAYPG-TL- 208 (324)
T ss_pred ecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH--HHh-----hhHHHHHHHHHHHHHHHHHHHHHHhccc-cc-
Confidence 999999999988887654 899999998643211100 000 0000011110000011111111111111 00
Q ss_pred cccHHHHH------HHHHhcCCc--chHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCC
Q 005554 579 RADDWLIS------EMLRASYDP--GVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650 (691)
Q Consensus 579 ~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~ 650 (691)
..+..... ++-.....+ ++.... .++. ..+....+.++++|+++|+|++|.+++++. .+.+.+..++
T Consensus 209 ~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~-~~y~---~~~~~~~l~~i~~P~lii~g~~D~~~~~~~-~~~~~~~~~~ 283 (324)
T PRK10985 209 PINLAQLKSVRRLREFDDLITARIHGFADAI-DYYR---QCSALPLLNQIRKPTLIIHAKDDPFMTHEV-IPKPESLPPN 283 (324)
T ss_pred cCCHHHHhcCCcHHHHhhhheeccCCCCCHH-HHHH---HCChHHHHhCCCCCEEEEecCCCCCCChhh-ChHHHHhCCC
Confidence 11111110 000000000 111111 1111 122345678999999999999999999874 3445667788
Q ss_pred cEEEEe-CCCCCCCccCh-----HHHHHHHHHHHHhh
Q 005554 651 IVIREL-DAGHCPHDEKP-----EEVNSIISEWIVTI 681 (691)
Q Consensus 651 ~~~~~~-~~GH~~~~e~p-----e~v~~~I~~fL~~~ 681 (691)
.+++++ ++||+.++|.. ..+-+.+.+|++..
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 888777 89999998742 35667778888654
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=171.83 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=140.3
Q ss_pred cCeEEEEEEeCC------CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCC-cCCCCCCcCCCHHHHHHHHHH
Q 005554 414 NGYQIQYTVAGK------EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPNIVYTELMWSELLRD 486 (691)
Q Consensus 414 ~g~~i~y~~~g~------~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~-G~S~~~~~~~s~~~~a~dl~~ 486 (691)
+|.+|.-....+ +.++||++||++++...|..+++.|+++||.|+.+|++|+ |.|++.....+......|+..
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~a 97 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLT 97 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHH
Confidence 667776554433 2478999999999988899999999999999999999987 999775544454445666655
Q ss_pred HHHHh---CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHh
Q 005554 487 FTVEV---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRL 563 (691)
Q Consensus 487 ll~~l---~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (691)
+++.+ +.+++.|+||||||.+++..|... .++++|+.+|....... ...
T Consensus 98 aid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~--------------------------l~~ 149 (307)
T PRK13604 98 VVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDT--------------------------LER 149 (307)
T ss_pred HHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHH--------------------------HHH
Confidence 55443 457899999999999997777643 39999999986432100 000
Q ss_pred hHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhcc--ccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHH
Q 005554 564 NISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSF--KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641 (691)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 641 (691)
....... .++ ........ + . ..........+...+.. .......+.++.+++|+|+|||++|.++|.+...
T Consensus 150 ~~~~~~~-~~p--~~~lp~~~-d--~-~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~ 222 (307)
T PRK13604 150 ALGYDYL-SLP--IDELPEDL-D--F-EGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVI 222 (307)
T ss_pred hhhcccc-cCc--cccccccc-c--c-ccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHH
Confidence 0000000 000 00000000 0 0 00000001111111111 1112223456678899999999999999999877
Q ss_pred HHHHHhC-CCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 642 AMFKEHC-AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 642 ~~~~~~~-~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
++++... .+++++++ +++|.+.. ++ -.+++|.+.+.
T Consensus 223 ~l~e~~~s~~kkl~~i~Ga~H~l~~-~~----~~~~~~~~~~~ 260 (307)
T PRK13604 223 DLLDSIRSEQCKLYSLIGSSHDLGE-NL----VVLRNFYQSVT 260 (307)
T ss_pred HHHHHhccCCcEEEEeCCCccccCc-ch----HHHHHHHHHHH
Confidence 7777654 57787777 89997653 33 33455555543
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-19 Score=177.25 Aligned_cols=216 Identities=20% Similarity=0.192 Sum_probs=131.4
Q ss_pred CEEEEeCCCCCcCCCC----CCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 455 NRVWAITLLGFGRSEK----PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 455 ~~Vi~~D~~G~G~S~~----~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
|+|+++|+||+|.|++ ....++.+++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 246889999999999999999999999999999999999999999999999999998520
Q ss_pred CCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhc----CCC---CccccHH-HHHHHHHhcCCcchHHHHH
Q 005554 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY----PTR---RERADDW-LISEMLRASYDPGVLVVLE 602 (691)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~ 602 (691)
............ ........................... ... ....... ....+..............
T Consensus 81 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00561_consen 81 -LPDGLWNRIWPR---GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFW 156 (230)
T ss_dssp -HHHHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred -chhhhhHHHHhh---hhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcc
Confidence 000000000000 000000000000000000000000000 000 0000000 0011111000000000001
Q ss_pred HHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHH
Q 005554 603 SIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIIS 675 (691)
Q Consensus 603 ~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~ 675 (691)
.........+....+..+++|+++++|++|.++|++.. ..+.+..|+.+++++ ++||+.+++.|+++++.|.
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~-~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESS-EQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHH-HHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHH-HHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 01111222334456778999999999999999999854 448889999999888 7799999999999999885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.6e-18 Score=171.03 Aligned_cols=227 Identities=19% Similarity=0.114 Sum_probs=137.3
Q ss_pred CCeEEEEcCCCC----ChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh-----CCcCEE
Q 005554 427 GPAILLVHGFGA----FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV-----VGEPVH 497 (691)
Q Consensus 427 ~p~VlliHG~~~----~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l-----~~~~v~ 497 (691)
+++||++||++. +...|..+++.|+++||+|+++|++|||.|.... .+++++.+|+.++++.+ +.++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i~ 103 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRIV 103 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 567888888653 4455677899999999999999999999987532 46777888888888776 457799
Q ss_pred EEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhH-HHHHHhhcCCC
Q 005554 498 LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNI-SNFVKQCYPTR 576 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 576 (691)
++||||||.+++.+|.. +++|+++|+++|......... ...... .+..... ..+........
T Consensus 104 l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~g~ 166 (274)
T TIGR03100 104 AWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQA-------------ASRIRH---YYLGQLLSADFWRKLLSGE 166 (274)
T ss_pred EEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccch-------------HHHHHH---HHHHHHhChHHHHHhcCCC
Confidence 99999999999999865 467999999998632111000 000000 0000000 01111111111
Q ss_pred Cc--cccHHHHHHHHHh-cCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHH-----HHHHHhC
Q 005554 577 RE--RADDWLISEMLRA-SYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV-----AMFKEHC 648 (691)
Q Consensus 577 ~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~-----~~~~~~~ 648 (691)
.. .....+....... ........ ......+...+..+++|+|+++|..|...+.- .. ....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~-~~~~~~~~~~~~~l 238 (274)
T TIGR03100 167 VNLGSSLRGLGDALLKARQKGDEVAH-------GGLAERMKAGLERFQGPVLFILSGNDLTAQEF-ADSVLGEPAWRGAL 238 (274)
T ss_pred ccHHHHHHHHHHHHHhhhhcCCCccc-------chHHHHHHHHHHhcCCcEEEEEcCcchhHHHH-HHHhccChhhHHHh
Confidence 00 0001111100000 00000000 00112233456678999999999999886421 10 2333333
Q ss_pred --CCcEEEEe-CCCCCCCccC-hHHHHHHHHHHHHh
Q 005554 649 --AGIVIREL-DAGHCPHDEK-PEEVNSIISEWIVT 680 (691)
Q Consensus 649 --~~~~~~~~-~~GH~~~~e~-pe~v~~~I~~fL~~ 680 (691)
++++++.+ ++||++..+. ++++.+.|.+||++
T Consensus 239 ~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 239 EDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 78888878 8999996666 69999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=176.19 Aligned_cols=274 Identities=16% Similarity=0.140 Sum_probs=158.8
Q ss_pred eEEEEE-EEcCeEEEEEEeC--------CCCCeEEEEcCCCCChHHHH------HHHHHHhcCCCEEEEeCCCCCcCCCC
Q 005554 406 YSTRIW-RWNGYQIQYTVAG--------KEGPAILLVHGFGAFLEHYR------DNIYDIADGGNRVWAITLLGFGRSEK 470 (691)
Q Consensus 406 ~~~~~~-~~~g~~i~y~~~g--------~~~p~VlliHG~~~~~~~~~------~~~~~L~~~G~~Vi~~D~~G~G~S~~ 470 (691)
.+.+.+ +-||+.|...... ..+|+|+|+||+++++..|. .++..|+++||+|+++|+||+|.|.+
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 344444 4578888776642 12679999999998888773 35567888999999999999886632
Q ss_pred -------CC--cCCCHHHHH-HHHHHHHHHh---CCcCEEEEEeChhHHHHHHHHHhCcc---ccceEEEecCCCCCCCc
Q 005554 471 -------PN--IVYTELMWS-ELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGNVIPE 534 (691)
Q Consensus 471 -------~~--~~~s~~~~a-~dl~~ll~~l---~~~~v~lvGhS~GG~ial~~A~~~P~---~V~~lVll~~~~~~~~~ 534 (691)
+. .++++++++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|+.+++++|.......
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~ 202 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHV 202 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccC
Confidence 11 257888888 7999999886 347899999999999998555 5776 68899999987543211
Q ss_pred hhhhh-h-hhhhh---------cCC--hhhhhhHHHHHHH--HhhHHHHHHhhcCCCCccccHHHHHHHHHh--------
Q 005554 535 YSFLQ-F-SNERQ---------ASG--PIRLGAQLLLFYL--RLNISNFVKQCYPTRRERADDWLISEMLRA-------- 591 (691)
Q Consensus 535 ~~~~~-~-~~~~~---------~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 591 (691)
..... . ..... ..+ .......+....- .......+..+.... ...+......+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~~~n~~~~~~~~~~~pagtS~k 281 (395)
T PLN02872 203 TAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN-CCFNASRIDYYLEYEPHPSSVK 281 (395)
T ss_pred CCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC-cccchhhhhHHHhcCCCcchHH
Confidence 10000 0 00000 000 0000000000000 000001111111111 11111111111111
Q ss_pred ---------------cCCcchHHHHHHHhccccCcchHhhhcCC--CCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEE
Q 005554 592 ---------------SYDPGVLVVLESIFSFKLSLPLNYLLEGF--KEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR 654 (691)
Q Consensus 592 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~ 654 (691)
.++.+.. .....+....+....+.++ ++|+++++|++|.+++++...+.+....+..+++
T Consensus 282 ~~~H~~Q~~~s~~f~~yDyg~~---~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 282 NLRHLFQMIRKGTFAHYDYGIF---KNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred HHHHHHHHHhcCCcccCCCCch---hhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 0111110 1111122223334456777 5799999999999999986655555554435666
Q ss_pred Ee-CCCCC---CCccChHHHHHHHHHHHHhhhCC
Q 005554 655 EL-DAGHC---PHDEKPEEVNSIISEWIVTIESK 684 (691)
Q Consensus 655 ~~-~~GH~---~~~e~pe~v~~~I~~fL~~~~~~ 684 (691)
.+ ++||. ...+.|+++.+.|.+|+++..+.
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 66 89995 44578999999999999976543
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-17 Score=173.93 Aligned_cols=265 Identities=15% Similarity=0.144 Sum_probs=146.1
Q ss_pred EEcCeEEEEEEeC---CCCCeEEEEcCCCCChHHH-----HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHH-
Q 005554 412 RWNGYQIQYTVAG---KEGPAILLVHGFGAFLEHY-----RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE- 482 (691)
Q Consensus 412 ~~~g~~i~y~~~g---~~~p~VlliHG~~~~~~~~-----~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~- 482 (691)
+.++.+++..... ..+++||++||+..+...+ ..+++.|.++||+|+++|++|+|.|+. ..++++++.
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~~~ 120 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYING 120 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHHHH
Confidence 3344555544322 1256899999986555443 579999999999999999999998754 345555543
Q ss_pred ----HHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhh--------cCCh-
Q 005554 483 ----LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQ--------ASGP- 549 (691)
Q Consensus 483 ----dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~--------~~~~- 549 (691)
.+..+.+..+.++++++||||||.+++.+++.+|++|+++|+++++................. ...+
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 200 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIP 200 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCC
Confidence 344455566778999999999999999999999999999999998765432111100000000 0000
Q ss_pred hhhhhHHHHHHH--HhhHHHHHHhhcC-CCCccccHHH-HHHHHHhcCCc---chHHHHHHHhccccC-------cchHh
Q 005554 550 IRLGAQLLLFYL--RLNISNFVKQCYP-TRRERADDWL-ISEMLRASYDP---GVLVVLESIFSFKLS-------LPLNY 615 (691)
Q Consensus 550 ~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~ 615 (691)
............ ......+...... .......... ...+....... .....+..++....- .....
T Consensus 201 ~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~ 280 (350)
T TIGR01836 201 GELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKV 280 (350)
T ss_pred HHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEc
Confidence 000000000000 0000001100000 0000000000 00000000000 011111111111100 00112
Q ss_pred hhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCC--CcEEEEeCCCCCCCccC---hHHHHHHHHHHHHh
Q 005554 616 LLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA--GIVIRELDAGHCPHDEK---PEEVNSIISEWIVT 680 (691)
Q Consensus 616 ~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~--~~~~~~~~~GH~~~~e~---pe~v~~~I~~fL~~ 680 (691)
.+.++++|+++++|++|.++|++.... +.+..+ +.++++.++||+..+.. ++++...|.+||++
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDASKA-LNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHHHHH-HHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 366889999999999999999985544 444444 34556568999887765 48999999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-16 Score=159.21 Aligned_cols=202 Identities=14% Similarity=0.133 Sum_probs=120.3
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHH-------HHHHHHHHHHHH------hCC
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTEL-------MWSELLRDFTVE------VVG 493 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~-------~~a~dl~~ll~~------l~~ 493 (691)
.|+||++||++++...|..++..|.++||+|+++|+||||.+.......++. ...+++.++++. ++.
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLD 106 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 5899999999999988999999999999999999999999764322111111 122333333333 234
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhc
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY 573 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (691)
++++++||||||.+++.++.++|+....++++++... .... . ..+....
T Consensus 107 ~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-------------------~~~~--------~----~~~~~~~ 155 (249)
T PRK10566 107 DRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-------------------TSLA--------R----TLFPPLI 155 (249)
T ss_pred cceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-------------------HHHH--------H----Hhccccc
Confidence 6899999999999999999998874334444433200 0000 0 0000000
Q ss_pred CCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCC-CCcEEEEEeCCCCCCChhHHHHHHHHhCC---
Q 005554 574 PTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGF-KEKVLIIQGIKDPISDSKSKVAMFKEHCA--- 649 (691)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLiI~G~~D~~vp~~~~~~~~~~~~~--- 649 (691)
..... ........ ...... .+....+.++ ++|+|+|+|++|.++|++...++.+....
T Consensus 156 ~~~~~--~~~~~~~~------------~~~~~~----~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 156 PETAA--QQAEFNNI------------VAPLAE----WEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred ccccc--cHHHHHHH------------HHHHhh----cChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 00000 00000000 000000 1112234555 69999999999999999865554443322
Q ss_pred --CcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 650 --GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 650 --~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+.+++.. ++||... + +..+.+.+||++.
T Consensus 218 ~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 2455555 8999863 3 5678999999863
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=152.13 Aligned_cols=180 Identities=18% Similarity=0.271 Sum_probs=122.2
Q ss_pred CeEEEEcCCCCChHHHHH--HHHHHhcC--CCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeCh
Q 005554 428 PAILLVHGFGAFLEHYRD--NIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI 503 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~--~~~~L~~~--G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~ 503 (691)
|+||++||++++...|.. +...|.+. +|+|+++|+||+| +++++++.+++++++.++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 689999999999998874 34556542 6999999999985 46888999999999999999999999
Q ss_pred hHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh---hcCCCCccc
Q 005554 504 GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ---CYPTRRERA 580 (691)
Q Consensus 504 GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 580 (691)
||.+++.+|.++|. ++|+++|+..+. . ....++.. .+.......
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~~~---~---------------------------~~~~~~~~~~~~~~~~~~~~ 117 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVRPF---E---------------------------LLTDYLGENENPYTGQQYVL 117 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCCHH---H---------------------------HHHHhcCCcccccCCCcEEE
Confidence 99999999999983 468888863310 0 00000000 000000011
Q ss_pred cHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCC
Q 005554 581 DDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAG 659 (691)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~G 659 (691)
.....+ ...... .. .+. ..+|+++|+|++|.++|.+...+.++ +++.+++ +++
T Consensus 118 ~~~~~~----------------d~~~~~----~~-~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggd 171 (190)
T PRK11071 118 ESRHIY----------------DLKVMQ----ID-PLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGN 171 (190)
T ss_pred cHHHHH----------------HHHhcC----Cc-cCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCC
Confidence 111111 111111 11 122 67789999999999999997666655 3355555 899
Q ss_pred CCCCccChHHHHHHHHHHHH
Q 005554 660 HCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 660 H~~~~e~pe~v~~~I~~fL~ 679 (691)
|.. ...+++.+.|.+|+.
T Consensus 172 H~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 172 HAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred cch--hhHHHhHHHHHHHhc
Confidence 977 445899999999975
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-17 Score=176.84 Aligned_cols=239 Identities=15% Similarity=0.075 Sum_probs=141.4
Q ss_pred CCeEEEEcCCCCChHHHH-----HHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHHHHHHHHHhCCcCEEEE
Q 005554 427 GPAILLVHGFGAFLEHYR-----DNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLI 499 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~-----~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~dl~~ll~~l~~~~v~lv 499 (691)
+++|||+||+......|. .+++.|.++||+|+++|++|+|.|.... .+|..+.+.+.+..+++.++.++++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lv 267 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCV 267 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 689999999988777774 7999999999999999999999886532 355566677778888888899999999
Q ss_pred EeChhHHHHH----HHHHhC-ccccceEEEecCCCCCCCchhhhhhh---------hhh-hcCChhh-hhhHHHHHH--H
Q 005554 500 GNSIGGYFVA----IVACLW-PAVVKSVVLINSAGNVIPEYSFLQFS---------NER-QASGPIR-LGAQLLLFY--L 561 (691)
Q Consensus 500 GhS~GG~ial----~~A~~~-P~~V~~lVll~~~~~~~~~~~~~~~~---------~~~-~~~~~~~-~~~~~~~~~--~ 561 (691)
||||||.++. .+++.+ +++|++++++++............+. ... ....+.. ......... .
T Consensus 268 G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~ 347 (532)
T TIGR01838 268 GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLREN 347 (532)
T ss_pred EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChh
Confidence 9999999862 245555 78899999999876543211100000 000 0000000 000000000 0
Q ss_pred HhhHHHHHHhhcCCCCccccHHHHHHHHHhcCC-cc--hHHHHHHHhcccc-------CcchHhhhcCCCCcEEEEEeCC
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYD-PG--VLVVLESIFSFKL-------SLPLNYLLEGFKEKVLIIQGIK 631 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~-------~~~~~~~l~~i~~PvLiI~G~~ 631 (691)
...+..++..+....... . .....+...... ++ ....+..++..+. ..+....+..|++|+++|+|++
T Consensus 348 ~l~w~~~v~~yl~g~~~~-~-fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~ 425 (532)
T TIGR01838 348 DLIWNYYVDNYLKGKSPV-P-FDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATRE 425 (532)
T ss_pred hHHHHHHHHHHhcCCCcc-c-hhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCC
Confidence 001111222221111100 0 000011100000 11 1112222222111 0122346789999999999999
Q ss_pred CCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChH
Q 005554 632 DPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPE 668 (691)
Q Consensus 632 D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe 668 (691)
|.++|++. ...+.+.+++.+..++ ++||.+++++|.
T Consensus 426 D~IvP~~s-a~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 426 DHIAPWQS-AYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCcCCHHH-HHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 99999984 4556667778777777 899999998863
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-16 Score=158.31 Aligned_cols=260 Identities=23% Similarity=0.270 Sum_probs=151.1
Q ss_pred EcCeEEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCC--CEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH
Q 005554 413 WNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGG--NRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE 490 (691)
Q Consensus 413 ~~g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G--~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~ 490 (691)
..+..+.|...+..+|+|+++||++++...|......+.... |+|+++|+||||.|. .. .++...+++++..+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 7 ADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDA 84 (282)
T ss_pred CCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHH
Confidence 345567777766557799999999999988887434443321 899999999999997 22 34556669999999999
Q ss_pred hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhh-hhhhhcCChhhhhhHH-HHHHHHhhHHH-
Q 005554 491 VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQF-SNERQASGPIRLGAQL-LLFYLRLNISN- 567 (691)
Q Consensus 491 l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 567 (691)
++..+++++||||||.+++.++.++|++++++|++++............. ................ ...........
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 99988999999999999999999999999999999986431110000000 0000000000000000 00000000000
Q ss_pred HHHhhcCC----CCccccHHHHHHH---HHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHH
Q 005554 568 FVKQCYPT----RRERADDWLISEM---LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSK 640 (691)
Q Consensus 568 ~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~ 640 (691)
........ ............. ...... .. ...................+++|+++++|.+|.+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~- 239 (282)
T COG0596 165 LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR-AD---LAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAEL- 239 (282)
T ss_pred ccccccccchhccccccccccchhHhhhhhhhcc-cc---cchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHH-
Confidence 00000000 0000000000000 000000 00 000000000002234567888999999999997766653
Q ss_pred HHHHHHhCCC-cEEEEe-CCCCCCCccChHHHHHHHHHHHH
Q 005554 641 VAMFKEHCAG-IVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 641 ~~~~~~~~~~-~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
...+....++ .+++++ ++||++++++|+.+++.+.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 240 ARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 4455556664 777777 89999999999999999988554
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.2e-15 Score=151.02 Aligned_cols=267 Identities=18% Similarity=0.152 Sum_probs=168.8
Q ss_pred EcCeEEEEEEeCCC----CCeEEEEcCCCCChH-----------HHHHHHH---HHhcCCCEEEEeCCCCCc-CCCCCC-
Q 005554 413 WNGYQIQYTVAGKE----GPAILLVHGFGAFLE-----------HYRDNIY---DIADGGNRVWAITLLGFG-RSEKPN- 472 (691)
Q Consensus 413 ~~g~~i~y~~~g~~----~p~VlliHG~~~~~~-----------~~~~~~~---~L~~~G~~Vi~~D~~G~G-~S~~~~- 472 (691)
+.+..|.|..+|.- ..+||++||+++++. .|..++. .+....|.||+.|..|.+ .|+.|.
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 46788999999853 468999999988543 3444432 233334999999998876 454432
Q ss_pred ------------cCCCHHHHHHHHHHHHHHhCCcCEE-EEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhh
Q 005554 473 ------------IVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQ 539 (691)
Q Consensus 473 ------------~~~s~~~~a~dl~~ll~~l~~~~v~-lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~ 539 (691)
..++++|+++.-..++++||++++. +||.||||+.++.++..||++|.++|.++++....+......
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 2468999999889999999999976 899999999999999999999999999998755443221111
Q ss_pred hhh----hhhcCC-----------hhhhhhHHHHHHHHhhHHHHHHhhcCC----CCccc--cHHHHHHHH--------H
Q 005554 540 FSN----ERQASG-----------PIRLGAQLLLFYLRLNISNFVKQCYPT----RRERA--DDWLISEML--------R 590 (691)
Q Consensus 540 ~~~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~--------~ 590 (691)
... ...+.| ...+................+...+.. .+... ....++.++ .
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 000 011111 000100000111111111122222221 11110 122233332 2
Q ss_pred hcCCcchHHHHHHHhccccC---cchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcE-EEEe--CCCCCCCc
Q 005554 591 ASYDPGVLVVLESIFSFKLS---LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV-IREL--DAGHCPHD 664 (691)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~--~~GH~~~~ 664 (691)
...........+++..++.. .++...++.+++|+|++.-+.|.+.|++...+. .+.++.+. ++++ +.||..++
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~-~~~L~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRAL-AEALPAAGALREIDSPYGHDAFL 351 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHH-HHhccccCceEEecCCCCchhhh
Confidence 23333444444454444432 356677899999999999999999999965554 44444444 6555 78999999
Q ss_pred cChHHHHHHHHHHHHh
Q 005554 665 EKPEEVNSIISEWIVT 680 (691)
Q Consensus 665 e~pe~v~~~I~~fL~~ 680 (691)
...+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 9999999999999975
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-17 Score=153.29 Aligned_cols=254 Identities=16% Similarity=0.163 Sum_probs=145.7
Q ss_pred EEEEEeCC---CCCeEEEEcCCCCChHHHHHHHHHHhcC-CCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhC
Q 005554 418 IQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVV 492 (691)
Q Consensus 418 i~y~~~g~---~~p~VlliHG~~~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~ 492 (691)
+..+..++ .+|.+++.||+|.+.-.|..++..|... ..+|+++|+||||.|...+ .+++.+.+++|+.++++.+-
T Consensus 62 ~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~f 141 (343)
T KOG2564|consen 62 FNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELF 141 (343)
T ss_pred EEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHh
Confidence 44444444 5899999999999999999999998764 4688999999999998644 57999999999999999874
Q ss_pred C---cCEEEEEeChhHHHHHHHHHh--CccccceEEEecCCCCCC-CchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHH
Q 005554 493 G---EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGNVI-PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNIS 566 (691)
Q Consensus 493 ~---~~v~lvGhS~GG~ial~~A~~--~P~~V~~lVll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (691)
. .+++||||||||.|+...|.. -|. +.|+++++-.-... ............++..+..+...+.........+
T Consensus 142 ge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~R 220 (343)
T KOG2564|consen 142 GELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLR 220 (343)
T ss_pred ccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccc
Confidence 3 679999999999999887764 465 99999998641100 0000011111111222211111111000000000
Q ss_pred HHHHhhcCCCCccccHHHH-HHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHH
Q 005554 567 NFVKQCYPTRRERADDWLI-SEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK 645 (691)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~ 645 (691)
........ -+..+....- ..+.....-......+..++. .+....-...+|-|+|....|.+-..- ..-
T Consensus 221 n~~SArVs-mP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~-----gLS~~Fl~~p~~klLilAg~d~LDkdL----tiG 290 (343)
T KOG2564|consen 221 NRDSARVS-MPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFK-----GLSDKFLGLPVPKLLILAGVDRLDKDL----TIG 290 (343)
T ss_pred ccccceEe-cchheeeccCCCcEEEEeeccccchhHHHHHh-----hhhhHhhCCCccceeEEecccccCcce----eee
Confidence 00000000 0000000000 000000000000111111111 112233456788888888877653221 112
Q ss_pred HhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 646 EHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 646 ~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
++....++.++ .+||+.+.+.|..++..+..|+.++.
T Consensus 291 QMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 291 QMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 23345667777 99999999999999999999998875
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-15 Score=179.72 Aligned_cols=255 Identities=19% Similarity=0.226 Sum_probs=150.6
Q ss_pred CCCeEEEEcCCCCChHHHHHH-----HHHHhcCCCEEEEeCCCCCcCCCCCCc--CCCHHHHHHHHHHHHHH---hCCcC
Q 005554 426 EGPAILLVHGFGAFLEHYRDN-----IYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLRDFTVE---VVGEP 495 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~-----~~~L~~~G~~Vi~~D~~G~G~S~~~~~--~~s~~~~a~dl~~ll~~---l~~~~ 495 (691)
.+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.++.+.. ..++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 368999999999999999864 8899999999999994 66665432 35677776666666554 34578
Q ss_pred EEEEEeChhHHHHHHHHHhC-ccccceEEEecCCCCCCCchh-hhhhh--hh---------hhcCCh----hhhhhHHHH
Q 005554 496 VHLIGNSIGGYFVAIVACLW-PAVVKSVVLINSAGNVIPEYS-FLQFS--NE---------RQASGP----IRLGAQLLL 558 (691)
Q Consensus 496 v~lvGhS~GG~ial~~A~~~-P~~V~~lVll~~~~~~~~~~~-~~~~~--~~---------~~~~~~----~~~~~~~~~ 558 (691)
++++||||||.+++.+++.+ +++|+++|+++++........ ..... .. .....+ .......+.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~ 222 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLD 222 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcC
Confidence 99999999999999998765 558999999888754322100 00000 00 000000 000000000
Q ss_pred HHH-HhhHHHHHHhhcCCCCccccHHHHHHHHHhc---C--CcchHHHHHHHhccccC----cch---HhhhcCCCCcEE
Q 005554 559 FYL-RLNISNFVKQCYPTRRERADDWLISEMLRAS---Y--DPGVLVVLESIFSFKLS----LPL---NYLLEGFKEKVL 625 (691)
Q Consensus 559 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~----~~~---~~~l~~i~~PvL 625 (691)
... ......++..... .....+++....+.... . ..........+...... ... ...+.+|++|+|
T Consensus 223 p~~~~~~~~~~~~~l~~-~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 223 PVKTAKARVDFLRQLHD-REALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred hhHHHHHHHHHHHhcCc-hhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 000 0011112222211 11111111112221111 1 11122233333221110 011 124789999999
Q ss_pred EEEeCCCCCCChhHHHHHHHHhCCCcEE-EEe-CCCCCCCcc---ChHHHHHHHHHHHHhhhCCC
Q 005554 626 IIQGIKDPISDSKSKVAMFKEHCAGIVI-REL-DAGHCPHDE---KPEEVNSIISEWIVTIESKV 685 (691)
Q Consensus 626 iI~G~~D~~vp~~~~~~~~~~~~~~~~~-~~~-~~GH~~~~e---~pe~v~~~I~~fL~~~~~~~ 685 (691)
+|+|++|.++|++. .+.+.+..++.++ .++ ++||+.++- .++++...|.+||++.....
T Consensus 302 ~i~G~~D~ivp~~~-~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~ 365 (994)
T PRK07868 302 AFVGEVDDIGQPAS-VRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDG 365 (994)
T ss_pred EEEeCCCCCCCHHH-HHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCC
Confidence 99999999999985 4556677788886 444 899987764 48999999999999876543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=138.39 Aligned_cols=144 Identities=26% Similarity=0.347 Sum_probs=109.8
Q ss_pred eEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHH
Q 005554 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFV 508 (691)
Q Consensus 429 ~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ia 508 (691)
+||++||++++...|..+++.|+++||.|+++|+||+|.+.... ..+++.+++. ....+.++++++|||+||.++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a 75 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD---AVERVLADIR--AGYPDPDRIILIGHSMGGAIA 75 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH---HHHHHHHHHH--HHHCTCCEEEEEEETHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH---HHHHHHHHHH--hhcCCCCcEEEEEEccCcHHH
Confidence 68999999999999999999999999999999999999873211 2222222222 112356889999999999999
Q ss_pred HHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHH
Q 005554 509 AIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM 588 (691)
Q Consensus 509 l~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (691)
+.++.++ .+|+++|++++. +.
T Consensus 76 ~~~~~~~-~~v~~~v~~~~~----~~------------------------------------------------------ 96 (145)
T PF12695_consen 76 ANLAARN-PRVKAVVLLSPY----PD------------------------------------------------------ 96 (145)
T ss_dssp HHHHHHS-TTESEEEEESES----SG------------------------------------------------------
T ss_pred HHHhhhc-cceeEEEEecCc----cc------------------------------------------------------
Confidence 9999998 679999999872 00
Q ss_pred HHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCC
Q 005554 589 LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHC 661 (691)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~ 661 (691)
...+...+.|+++++|++|.+++.+...+.+++...+.++.++ +++|+
T Consensus 97 -------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0113345669999999999999998777777777667788887 89995
|
... |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-14 Score=137.40 Aligned_cols=111 Identities=20% Similarity=0.204 Sum_probs=98.1
Q ss_pred EEEEeCCC---CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhCC-
Q 005554 419 QYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG- 493 (691)
Q Consensus 419 ~y~~~g~~---~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~~- 493 (691)
-|.+..++ ..+||=+||-+++...|+++...|.+.|+|+|.+++||+|.++.+. ..++.++-...+.++++.+++
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~ 103 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK 103 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC
Confidence 35555443 2389999999999999999999999999999999999999998755 578999999999999999998
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~ 531 (691)
++++.+|||.|+-.|+.+|..+| +.++++++|++..
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 56889999999999999999996 6799999998654
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=142.08 Aligned_cols=257 Identities=16% Similarity=0.127 Sum_probs=149.2
Q ss_pred EEEEEcCeEEEEEEeCCC---CCeEEEEcCCCCChHH-HHHH-----HHHHhcCCCEEEEeCCCCCcCCCC--CCc--CC
Q 005554 409 RIWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEH-YRDN-----IYDIADGGNRVWAITLLGFGRSEK--PNI--VY 475 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~---~p~VlliHG~~~~~~~-~~~~-----~~~L~~~G~~Vi~~D~~G~G~S~~--~~~--~~ 475 (691)
+.++..-..+++...|.. +|++|-.|-.|.+... |..+ +..+.++ |.|+-+|.||+..-.. +.+ ..
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccccc
Confidence 456667778888888853 7899999999988655 5543 4556665 9999999999976443 332 45
Q ss_pred CHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhH
Q 005554 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 476 s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
|+++++++|.+++++++++.++.+|-..||.|..++|..||++|.|+||+++.+... .|..+....
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~--------------gw~Ew~~~K 146 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA--------------GWMEWFYQK 146 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----------------HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc--------------cHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999975421 122222222
Q ss_pred HHHHH------HHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCC-cchHHHHHHHhccccCcchHhhhcCCCCcEEEEE
Q 005554 556 LLLFY------LRLNISNFVKQCYPTRRERADDWLISEMLRASYD-PGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQ 628 (691)
Q Consensus 556 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 628 (691)
..... .......++...+.........++++.+...... .+.......+..+..+.++....+...||+|+|.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 11100 0111122222333322222223344333332211 1112222222233344555556677889999999
Q ss_pred eCCCCCCChhHHHHHHHHhCC-CcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 629 GIKDPISDSKSKVAMFKEHCA-GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 629 G~~D~~vp~~~~~~~~~~~~~-~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
|+..+.... ..+...++-| +..+..+ +||=++..|+|+.+++.+.-|++...
T Consensus 227 G~~Sp~~~~--vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 227 GDNSPHVDD--VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp ETTSTTHHH--HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred ecCCcchhh--HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 999987543 4565556554 4456666 89999999999999999999998753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.2e-15 Score=148.52 Aligned_cols=102 Identities=22% Similarity=0.195 Sum_probs=87.5
Q ss_pred CCeEEEEcCCCCC----hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHH---HHhCCcCEEEE
Q 005554 427 GPAILLVHGFGAF----LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT---VEVVGEPVHLI 499 (691)
Q Consensus 427 ~p~VlliHG~~~~----~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll---~~l~~~~v~lv 499 (691)
.++|||+||++.. ...|..+++.|+++||+|+++|+||||.|.......+++.+.+|+..++ +..+.++++|+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999999864 3567778899998999999999999999987655668888888877754 44456889999
Q ss_pred EeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 500 GNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 500 GhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
||||||.+++.+|.++|++++++|+++|.
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEeccc
Confidence 99999999999999999999999999986
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-13 Score=131.35 Aligned_cols=257 Identities=15% Similarity=0.126 Sum_probs=174.0
Q ss_pred eEEEEEEEcCeEEEEEEeCCC---CCeEEEEcCCCCChHH-HHH-----HHHHHhcCCCEEEEeCCCCCcCCCC--CCc-
Q 005554 406 YSTRIWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEH-YRD-----NIYDIADGGNRVWAITLLGFGRSEK--PNI- 473 (691)
Q Consensus 406 ~~~~~~~~~g~~i~y~~~g~~---~p~VlliHG~~~~~~~-~~~-----~~~~L~~~G~~Vi~~D~~G~G~S~~--~~~- 473 (691)
.+.+-++..-..+++...|.. +|++|-.|..|.+... |.. -+..+.++ |.|+-+|.|||-.-.. +.+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCC
Confidence 344555555567888888753 6899999999987654 544 35567777 9999999999965433 332
Q ss_pred -CCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhh
Q 005554 474 -VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRL 552 (691)
Q Consensus 474 -~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (691)
-.|+++++++|..++++++.+.++-+|...|++|..++|..||++|.++||+++.+.. ..|+.+.
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a--------------~gwiew~ 166 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA--------------KGWIEWA 166 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC--------------chHHHHH
Confidence 3489999999999999999999999999999999999999999999999999986432 2333333
Q ss_pred hhHHHHHH------HHhhHHHHHHhhcCCCCccccHHHHHHHHHh---cCC-cchHHHHHHHhccccCcchHhhhc----
Q 005554 553 GAQLLLFY------LRLNISNFVKQCYPTRRERADDWLISEMLRA---SYD-PGVLVVLESIFSFKLSLPLNYLLE---- 618 (691)
Q Consensus 553 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~l~---- 618 (691)
.......+ ......-++...+.........++++++... ... .+....++++. .+.|+.....
T Consensus 167 ~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn---~R~DL~~~r~~~~~ 243 (326)
T KOG2931|consen 167 YNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYN---GRRDLSIERPKLGT 243 (326)
T ss_pred HHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhc---CCCCccccCCCcCc
Confidence 33332211 1222333444555544444455555554433 222 22222333332 2223222222
Q ss_pred CCCCcEEEEEeCCCCCCChhHHHHHHHHhCC-CcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 619 GFKEKVLIIQGIKDPISDSKSKVAMFKEHCA-GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 619 ~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~-~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
.++||+|++.|+..+.+.. ..+.-.++-| +..+..+ ++|-.+..++|..+++.+.-|++...
T Consensus 244 tlkc~vllvvGd~Sp~~~~--vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 244 TLKCPVLLVVGDNSPHVSA--VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred cccccEEEEecCCCchhhh--hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 5569999999999987653 3343333333 4556666 99999999999999999999999754
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=137.49 Aligned_cols=192 Identities=19% Similarity=0.234 Sum_probs=130.3
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhc-CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhC--CcCEEEEEeCh
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--GEPVHLIGNSI 503 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~--~~~v~lvGhS~ 503 (691)
.++||++||..........+...|.. -+++|+++|+.|+|.|.+.+......+-++.+-+++++-. .++++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 58999999997776655566666655 2699999999999999986644443333334444444433 47899999999
Q ss_pred hHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHH
Q 005554 504 GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583 (691)
Q Consensus 504 GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (691)
|+..++.+|+++| +.++||.+|.... ++.+++..... +
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~-------------------------------------~rv~~~~~~~~---~ 177 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSG-------------------------------------MRVAFPDTKTT---Y 177 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhh-------------------------------------hhhhccCcceE---E
Confidence 9999999999999 9999999985211 00011100000 0
Q ss_pred HHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcE-EEEeCCCCCC
Q 005554 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV-IRELDAGHCP 662 (691)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~~~GH~~ 662 (691)
.. . .....+.++.|+||+|++||++|.+++.....++++......+ +.+.++||.-
T Consensus 178 ~~-----------------d------~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~ 234 (258)
T KOG1552|consen 178 CF-----------------D------AFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHND 234 (258)
T ss_pred ee-----------------c------cccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcc
Confidence 00 0 0000235678999999999999999999866666655544434 4444999976
Q ss_pred CccChHHHHHHHHHHHHhhhCC
Q 005554 663 HDEKPEEVNSIISEWIVTIESK 684 (691)
Q Consensus 663 ~~e~pe~v~~~I~~fL~~~~~~ 684 (691)
..- ..++.+.+..|+......
T Consensus 235 ~~~-~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 235 IEL-YPEYIEHLRRFISSVLPS 255 (258)
T ss_pred ccc-CHHHHHHHHHHHHHhccc
Confidence 544 457779999999876654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.1e-14 Score=137.02 Aligned_cols=249 Identities=16% Similarity=0.158 Sum_probs=135.9
Q ss_pred CCeEEEEcCCCCC--hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh----CCcCEEEEE
Q 005554 427 GPAILLVHGFGAF--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----VGEPVHLIG 500 (691)
Q Consensus 427 ~p~VlliHG~~~~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l----~~~~v~lvG 500 (691)
+|.||++||+.++ +...+.+++.+.++||.|+++++|||+.+........-.-+.+|+..+++.+ ...++..+|
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG 154 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVG 154 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEE
Confidence 7899999998554 3344568888999999999999999998875332221122235555555443 457899999
Q ss_pred eChhHHHHHHHHHhCcc--ccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCc
Q 005554 501 NSIGGYFVAIVACLWPA--VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRE 578 (691)
Q Consensus 501 hS~GG~ial~~A~~~P~--~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (691)
.|+||.+...+..+.-+ .+.+.+.++.+... ..........+...+...............-+...-+..+.
T Consensus 155 ~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl------~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~ 228 (345)
T COG0429 155 FSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL------EACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPG 228 (345)
T ss_pred ecccHHHHHHHHHhhccCcccceeeeeeCHHHH------HHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCc
Confidence 99999655555554322 35556655554221 11111111111112222222222222222222222111111
Q ss_pred cccHHHHHHHHH-hcCCcch---HHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEE
Q 005554 579 RADDWLISEMLR-ASYDPGV---LVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR 654 (691)
Q Consensus 579 ~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~ 654 (691)
.... ..+.... ..++... ...+.....+....+....+.+|.+|+|+|+..+|++++++..-+......|++.+.
T Consensus 229 ~~~~-~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~ 307 (345)
T COG0429 229 TVLA-AIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQ 307 (345)
T ss_pred HHHH-HHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEE
Confidence 1111 1111000 0000000 000011111222223345788999999999999999999974433333366888888
Q ss_pred Ee-CCCCCCCcc----ChH-HHHHHHHHHHHhhh
Q 005554 655 EL-DAGHCPHDE----KPE-EVNSIISEWIVTIE 682 (691)
Q Consensus 655 ~~-~~GH~~~~e----~pe-~v~~~I~~fL~~~~ 682 (691)
+. .+||..++. +|. ..-+.|.+|++...
T Consensus 308 ~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 308 LTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred eecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 88 799988887 343 56677788887654
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=6e-13 Score=136.38 Aligned_cols=243 Identities=16% Similarity=0.189 Sum_probs=131.2
Q ss_pred CCCeEEEEcCCCCC-hHHH-HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHH----HhCCcCEEEE
Q 005554 426 EGPAILLVHGFGAF-LEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV----EVVGEPVHLI 499 (691)
Q Consensus 426 ~~p~VlliHG~~~~-~~~~-~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~----~l~~~~v~lv 499 (691)
..|+||++||+.++ .+.| +.++..+.+.||+|++++.||+|.|.-.....-...+.+|+.++++ .....++..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 36999999998554 3444 5678888888999999999999998764432212223445555554 4455789999
Q ss_pred EeChhHHHHHHHHHhCcc---ccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHh----hHHHHHHhh
Q 005554 500 GNSIGGYFVAIVACLWPA---VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRL----NISNFVKQC 572 (691)
Q Consensus 500 GhS~GG~ial~~A~~~P~---~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 572 (691)
|.||||++.+.|.++..+ .+.++++.+|. +.. .............+........... ....++...
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~------~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~ 276 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLL------AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDP 276 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEeccc-hhh------hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhcc
Confidence 999999999999887543 34555555553 211 0011111111111111111111110 000011100
Q ss_pred cCCC---CccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCC
Q 005554 573 YPTR---RERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA 649 (691)
Q Consensus 573 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~ 649 (691)
.... ..+...++-+.+....+. + .....+....+....+.+|++|+|+|++.+|+++|++..-.......|
T Consensus 277 vd~d~~~~~~SvreFD~~~t~~~~g--f----~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np 350 (409)
T KOG1838|consen 277 VDFDVILKSRSVREFDEALTRPMFG--F----KSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNP 350 (409)
T ss_pred chhhhhhhcCcHHHHHhhhhhhhcC--C----CcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCC
Confidence 0000 000000110111111100 0 011112222344557889999999999999999998644333444557
Q ss_pred CcEEEEe-CCCCCCCccC----hHHHHHH-HHHHHHhh
Q 005554 650 GIVIREL-DAGHCPHDEK----PEEVNSI-ISEWIVTI 681 (691)
Q Consensus 650 ~~~~~~~-~~GH~~~~e~----pe~v~~~-I~~fL~~~ 681 (691)
+.-+++. .+||..++|. +....+. +.+|+...
T Consensus 351 ~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 351 NVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred cEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 7777777 7999999987 2223333 66666543
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=140.81 Aligned_cols=100 Identities=19% Similarity=0.147 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHH---HHHHHHHHHHH-------hCCcC
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM---WSELLRDFTVE-------VVGEP 495 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~---~a~dl~~ll~~-------l~~~~ 495 (691)
..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.. ...+++ +.+.+.+.++. .+.++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~---~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG---TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc---hhhHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 368999999999999999999999999999999999999754321 112222 22222222222 23367
Q ss_pred EEEEEeChhHHHHHHHHHhCcc-----ccceEEEecCC
Q 005554 496 VHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSA 528 (691)
Q Consensus 496 v~lvGhS~GG~ial~~A~~~P~-----~V~~lVll~~~ 528 (691)
++++||||||.+++.+|..+++ +++++|+++|.
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 9999999999999999999874 58999999986
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.5e-13 Score=127.12 Aligned_cols=226 Identities=13% Similarity=0.096 Sum_probs=148.9
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHH-HhCCcCEEEEEeChhH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV-EVVGEPVHLIGNSIGG 505 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~-~l~~~~v~lvGhS~GG 505 (691)
+..|+++|=.|+++..|+.....|... +.++++++||+|.--......+++++++.|..-+. -+..+++.++||||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa 85 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGA 85 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhH
Confidence 568999999999999999999988764 99999999999987666667789999999998887 4555789999999999
Q ss_pred HHHHHHHHhCcc---ccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccH
Q 005554 506 YFVAIVACLWPA---VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADD 582 (691)
Q Consensus 506 ~ial~~A~~~P~---~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (691)
++|.++|.+... .+.++.+.+......... ..+..... ..+-..+...-...+....+
T Consensus 86 ~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~-----------~~i~~~~D--------~~~l~~l~~lgG~p~e~led 146 (244)
T COG3208 86 MLAFEVARRLERAGLPPRALFISGCRAPHYDRG-----------KQIHHLDD--------ADFLADLVDLGGTPPELLED 146 (244)
T ss_pred HHHHHHHHHHHHcCCCcceEEEecCCCCCCccc-----------CCccCCCH--------HHHHHHHHHhCCCChHHhcC
Confidence 999999987532 255666665532211000 00000000 01111111222212122222
Q ss_pred HHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEeCCCCCC
Q 005554 583 WLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCP 662 (691)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~GH~~ 662 (691)
.....++... ...-+...-.+... .-..+.||+.++.|++|..+..+....+-+......++.++++||+.
T Consensus 147 ~El~~l~LPi----lRAD~~~~e~Y~~~-----~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFf 217 (244)
T COG3208 147 PELMALFLPI----LRADFRALESYRYP-----PPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFF 217 (244)
T ss_pred HHHHHHHHHH----HHHHHHHhcccccC-----CCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCccee
Confidence 2222221111 11101111111111 12578999999999999999998766666666678889999999999
Q ss_pred CccChHHHHHHHHHHHHhh
Q 005554 663 HDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 663 ~~e~pe~v~~~I~~fL~~~ 681 (691)
..++.+++.+.|.+.+...
T Consensus 218 l~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 218 LNQQREEVLARLEQHLAHH 236 (244)
T ss_pred hhhhHHHHHHHHHHHhhhh
Confidence 9999999999999998643
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-13 Score=136.81 Aligned_cols=117 Identities=19% Similarity=0.167 Sum_probs=82.7
Q ss_pred cCeEEEEEEeC------CCCCeEEEEcCCCCChHHHHH---HHHHHhcCCCEEEEeCCCCCcC-----CCC---------
Q 005554 414 NGYQIQYTVAG------KEGPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITLLGFGR-----SEK--------- 470 (691)
Q Consensus 414 ~g~~i~y~~~g------~~~p~VlliHG~~~~~~~~~~---~~~~L~~~G~~Vi~~D~~G~G~-----S~~--------- 470 (691)
-|.++.|..+- .+.|+|+|+||++++...|.. +...+...|+.|+++|..++|. +..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 45566666552 236899999999988776643 3455667799999999877661 110
Q ss_pred ----CC--------cCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 471 ----PN--------IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 471 ----~~--------~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
.. ..+-.+++.+.+....+.++.++++++||||||..++.++.++|+++++++++++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 00 0112333444444444556778899999999999999999999999999999998643
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.8e-13 Score=130.72 Aligned_cols=171 Identities=16% Similarity=0.108 Sum_probs=109.2
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCC-----------CcCCCH---HHHHHHHHH----H
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-----------NIVYTE---LMWSELLRD----F 487 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~-----------~~~~s~---~~~a~dl~~----l 487 (691)
..|+|||+||+|++...|..+++.|.+.++.+..++.+|...+... ...... .+..+.+.+ +
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999876655555555554322110 001111 122222222 2
Q ss_pred HHHhCC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhH
Q 005554 488 TVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNI 565 (691)
Q Consensus 488 l~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (691)
.+..+. ++++++|||+||.+++.++..+|+.+.++|.+++... .
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---~------------------------------- 140 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---S------------------------------- 140 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---c-------------------------------
Confidence 333343 5799999999999999999999988888887765200 0
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHH
Q 005554 566 SNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK 645 (691)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~ 645 (691)
.+ . ....++|+++++|++|.++|.+...+..+
T Consensus 141 -------~~---~--------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 141 -------LP---E--------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred -------cc---c--------------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 00 0 00126799999999999999886544433
Q ss_pred H---hCCCcEEEEe-CCCCCCCccChHHHHHHHHHHH
Q 005554 646 E---HCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678 (691)
Q Consensus 646 ~---~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL 678 (691)
. ...++++++. ++||.+..+.-+.+.+.+.++|
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 3 2345677765 8999986444444444444443
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=124.50 Aligned_cols=219 Identities=12% Similarity=0.086 Sum_probs=138.3
Q ss_pred EEEEEEEcCeEEEEEE--eCCCCCeEEEEcCCCCChHHHHHHHHHHh-cCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHH
Q 005554 407 STRIWRWNGYQIQYTV--AGKEGPAILLVHGFGAFLEHYRDNIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~--~g~~~p~VlliHG~~~~~~~~~~~~~~L~-~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~d 483 (691)
.+...+-|.++++-.. ..++.|+|+++||..++.....+++.-+- .-+.+|+.+++||+|.|.+.+..-.+ .-|
T Consensus 56 ~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL---~lD 132 (300)
T KOG4391|consen 56 RIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL---KLD 132 (300)
T ss_pred EEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccce---ecc
Confidence 3445555777776432 23358999999999998877767666543 44789999999999999875522221 222
Q ss_pred HHHHHHHh------CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHH
Q 005554 484 LRDFTVEV------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL 557 (691)
Q Consensus 484 l~~ll~~l------~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (691)
-..+++++ ...++++.|-|+||.+|+.+|++..+++.++|+-++..... . . ..+.+..+
T Consensus 133 s~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp-~--------~-~i~~v~p~----- 197 (300)
T KOG4391|consen 133 SEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIP-H--------M-AIPLVFPF----- 197 (300)
T ss_pred HHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccch-h--------h-hhheeccc-----
Confidence 22333332 23679999999999999999999999999999988752210 0 0 00000000
Q ss_pred HHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCCh
Q 005554 558 LFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDS 637 (691)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~ 637 (691)
....+..+. .+. .+. ....+..-..|.|+|.|..|.++||
T Consensus 198 ---~~k~i~~lc---------------~kn----------------~~~------S~~ki~~~~~P~LFiSGlkDelVPP 237 (300)
T KOG4391|consen 198 ---PMKYIPLLC---------------YKN----------------KWL------SYRKIGQCRMPFLFISGLKDELVPP 237 (300)
T ss_pred ---hhhHHHHHH---------------HHh----------------hhc------chhhhccccCceEEeecCccccCCc
Confidence 000000000 000 000 0012345578999999999999999
Q ss_pred hHHHHHHHHhCC-CcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhhCC
Q 005554 638 KSKVAMFKEHCA-GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESK 684 (691)
Q Consensus 638 ~~~~~~~~~~~~-~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~~ 684 (691)
..+.+.+..... +.++... ++.|.-.+- -+...++|.+||.+....
T Consensus 238 ~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 238 VMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred HHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 876665554432 3445555 888865543 346789999999987654
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.8e-13 Score=123.15 Aligned_cols=215 Identities=17% Similarity=0.180 Sum_probs=136.3
Q ss_pred CCCeEEEEcCCCCCh--HHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcC---EEEEE
Q 005554 426 EGPAILLVHGFGAFL--EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEP---VHLIG 500 (691)
Q Consensus 426 ~~p~VlliHG~~~~~--~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~---v~lvG 500 (691)
+...||++||+-++. .....++..|.+.|+.++.+|++|.|.|......-.....++|+..+++++.... -+++|
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~g 111 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILG 111 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEe
Confidence 456899999997763 4556788899999999999999999999876533334445699999999986633 36789
Q ss_pred eChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCCh-hhhhhHHHHHHHHhhHHHHHHhhcCCCCc-
Q 005554 501 NSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGP-IRLGAQLLLFYLRLNISNFVKQCYPTRRE- 578 (691)
Q Consensus 501 hS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 578 (691)
||-||.+++.+|.++++ +.-+|.+++-+... ..+ .++... .+.......+.....
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~--------------~~I~eRlg~~--------~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDLK--------------NGINERLGED--------YLERIKEQGFIDVGPR 168 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccchh--------------cchhhhhccc--------HHHHHHhCCceecCcc
Confidence 99999999999999987 77777776643210 001 011111 111111111111111
Q ss_pred --cccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhc--CCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEE
Q 005554 579 --RADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLE--GFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR 654 (691)
Q Consensus 579 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~ 654 (691)
.....+..+-+.. . ...++.+... ..+||||-+||..|.++|.++ ...+++.+++.++.
T Consensus 169 kG~y~~rvt~eSlmd---------------r-Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~-AkefAk~i~nH~L~ 231 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMD---------------R-LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVED-AKEFAKIIPNHKLE 231 (269)
T ss_pred cCCcCceecHHHHHH---------------H-HhchhhhhhcCcCccCceEEEeccCCceeechh-HHHHHHhccCCceE
Confidence 1111111110000 0 0011111122 347999999999999999995 56677888888888
Q ss_pred Ee-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 655 EL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 655 ~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
++ ++.|..... .++.......|.+..
T Consensus 232 iIEgADHnyt~~-q~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 232 IIEGADHNYTGH-QSQLVSLGLEFIKTR 258 (269)
T ss_pred EecCCCcCccch-hhhHhhhcceeEEee
Confidence 88 899976544 345556666666543
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.4e-12 Score=129.48 Aligned_cols=117 Identities=20% Similarity=0.200 Sum_probs=83.7
Q ss_pred cCeEEEEEEeCC------CCCeEEEEcCCCCChHHHHHH--HHHH-hcCCCEEEEeCC--CCCcCCCCC-----------
Q 005554 414 NGYQIQYTVAGK------EGPAILLVHGFGAFLEHYRDN--IYDI-ADGGNRVWAITL--LGFGRSEKP----------- 471 (691)
Q Consensus 414 ~g~~i~y~~~g~------~~p~VlliHG~~~~~~~~~~~--~~~L-~~~G~~Vi~~D~--~G~G~S~~~----------- 471 (691)
-+.++.|..+.+ +.|+|+|+||++++...|... +..+ .+.|+.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 455555555433 258999999999988877532 3344 456899999998 555533210
Q ss_pred ---------CcCCCHHH-HHHHHHHHHHH---hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 472 ---------NIVYTELM-WSELLRDFTVE---VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 472 ---------~~~~s~~~-~a~dl~~ll~~---l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
...++..+ +++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++...
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 01223333 46777777776 3457899999999999999999999999999999988643
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.8e-12 Score=125.79 Aligned_cols=118 Identities=20% Similarity=0.302 Sum_probs=102.6
Q ss_pred EEEcCeEEEEEEeCCC-------CCeEEEEcCCCCChHHHHHHHHHHhcC---C------CEEEEeCCCCCcCCCCCC-c
Q 005554 411 WRWNGYQIQYTVAGKE-------GPAILLVHGFGAFLEHYRDNIYDIADG---G------NRVWAITLLGFGRSEKPN-I 473 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~~-------~p~VlliHG~~~~~~~~~~~~~~L~~~---G------~~Vi~~D~~G~G~S~~~~-~ 473 (691)
.++.|.+||+....++ -.|||++|||+++...|..++..|.+. | |.||++.+||+|.|+.+. .
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 4567888887765432 138999999999999999999999764 2 789999999999999876 5
Q ss_pred CCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 474 ~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
+++....|..+..+|-.+|.+++.+-|..||+.|+..+|..||+.|.|+-+-.+.
T Consensus 209 GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 209 GFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 7899999999999999999999999999999999999999999999998776654
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-12 Score=145.03 Aligned_cols=229 Identities=17% Similarity=0.117 Sum_probs=147.6
Q ss_pred ceEEEEEEEcCeEEEEEEeCCC--C-----CeEEEEcCCCCChH--HHHHHHHHHhcCCCEEEEeCCCCCcCCCC-----
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE--G-----PAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEK----- 470 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~--~-----p~VlliHG~~~~~~--~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~----- 470 (691)
+..+.+-..+|.+|+.....+. + |+||++||.+.... .|...++.|+.+||.|+.+++||.+.-..
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHh
Confidence 3445566668889988776542 1 79999999975443 46678889999999999999997654211
Q ss_pred ---CCcCCCHHHHHHHHHHHHHHhCC---cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhh
Q 005554 471 ---PNIVYTELMWSELLRDFTVEVVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNER 544 (691)
Q Consensus 471 ---~~~~~s~~~~a~dl~~ll~~l~~---~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~ 544 (691)
.......+|+.+.+. ++...+. ++++++|||+||.+++.++...| .+++.+...+........
T Consensus 445 ~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~--------- 513 (620)
T COG1506 445 IRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF--------- 513 (620)
T ss_pred hhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc---------
Confidence 123446777777777 5555544 57999999999999999999988 677777666642211000
Q ss_pred hcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcE
Q 005554 545 QASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKV 624 (691)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 624 (691)
... ................. . ... ...........++++|+
T Consensus 514 --------~~~------~~~~~~~~~~~~~~~~~--~----------------~~~-------~~~~sp~~~~~~i~~P~ 554 (620)
T COG1506 514 --------GES------TEGLRFDPEENGGGPPE--D----------------REK-------YEDRSPIFYADNIKTPL 554 (620)
T ss_pred --------ccc------chhhcCCHHHhCCCccc--C----------------hHH-------HHhcChhhhhcccCCCE
Confidence 000 00000000000000000 0 000 00111223467899999
Q ss_pred EEEEeCCCCCCChhHHHHHHHHh---CCCcEEEEe-CCCCCCCc-cChHHHHHHHHHHHHhhhC
Q 005554 625 LIIQGIKDPISDSKSKVAMFKEH---CAGIVIREL-DAGHCPHD-EKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 625 LiI~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~-~~GH~~~~-e~pe~v~~~I~~fL~~~~~ 683 (691)
|+|||++|..||.++..+++..+ ...++++++ +.||.+.- ++-..+.+.+.+|+++...
T Consensus 555 LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 555 LLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred EEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999999998666655544 355677777 99998777 4577888999999988654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.2e-12 Score=122.59 Aligned_cols=192 Identities=16% Similarity=0.170 Sum_probs=114.1
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCcCCCCC-----Cc---CCCHHHHHHHHHHHHHHh--CCcCEEEEEeChhHHHHHHHH
Q 005554 443 YRDNIYDIADGGNRVWAITLLGFGRSEKP-----NI---VYTELMWSELLRDFTVEV--VGEPVHLIGNSIGGYFVAIVA 512 (691)
Q Consensus 443 ~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~-----~~---~~s~~~~a~dl~~ll~~l--~~~~v~lvGhS~GG~ial~~A 512 (691)
|......|+++||.|+.+|+||.+..... .. ...++|..+.+..+++.- ..+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44567788899999999999998753321 11 122333444444443332 236799999999999999999
Q ss_pred HhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhc
Q 005554 513 CLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRAS 592 (691)
Q Consensus 513 ~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (691)
..+|++++++|..++............ . +... .... . +. +.. .......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~--------~-----------~~~~---~~~~-~-~~-~~~-~~~~~~~----- 131 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTD--------I-----------YTKA---EYLE-Y-GD-PWD-NPEFYRE----- 131 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTC--------C-----------HHHG---HHHH-H-SS-TTT-SHHHHHH-----
T ss_pred cccceeeeeeeccceecchhccccccc--------c-----------cccc---cccc-c-Cc-cch-hhhhhhh-----
Confidence 999999999999998644322111000 0 0000 0000 0 00 000 1111100
Q ss_pred CCcchHHHHHHHhccccCcchHhhhcC--CCCcEEEEEeCCCCCCChhHHHHHHHHh---CCCcEEEEe-CCCCCCC-cc
Q 005554 593 YDPGVLVVLESIFSFKLSLPLNYLLEG--FKEKVLIIQGIKDPISDSKSKVAMFKEH---CAGIVIREL-DAGHCPH-DE 665 (691)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLiI~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~-~~GH~~~-~e 665 (691)
... ...+.+ +++|+|+++|++|..||++...+++..+ ....++++. ++||... .+
T Consensus 132 -----------~s~-------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~ 193 (213)
T PF00326_consen 132 -----------LSP-------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE 193 (213)
T ss_dssp -----------HHH-------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH
T ss_pred -----------hcc-------ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch
Confidence 000 011233 7899999999999999998665555443 345777777 9999554 34
Q ss_pred ChHHHHHHHHHHHHhhhC
Q 005554 666 KPEEVNSIISEWIVTIES 683 (691)
Q Consensus 666 ~pe~v~~~I~~fL~~~~~ 683 (691)
...+..+.+.+||++...
T Consensus 194 ~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 194 NRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcC
Confidence 467889999999998654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-12 Score=137.28 Aligned_cols=109 Identities=17% Similarity=0.230 Sum_probs=85.6
Q ss_pred EeCCCCCeEEEEcCCCCCh--HHHHH-HHHHHhc--CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh-----
Q 005554 422 VAGKEGPAILLVHGFGAFL--EHYRD-NIYDIAD--GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----- 491 (691)
Q Consensus 422 ~~g~~~p~VlliHG~~~~~--~~~~~-~~~~L~~--~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l----- 491 (691)
...+.+|++|+|||++++. ..|.. ++..|.. ..|+||++|++|+|.|..+........+++++.++++.+
T Consensus 36 ~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 36 NFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhC
Confidence 3344589999999998653 45765 5665542 259999999999998876543334466777777777654
Q ss_pred -CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 492 -VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 492 -~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
+.++++||||||||.+|..++..+|++|.+|++++|++.
T Consensus 116 l~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 358999999999999999999999999999999999753
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=131.98 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=84.7
Q ss_pred CCeEEEEcCCCCChHHH-----HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh----CCcCEE
Q 005554 427 GPAILLVHGFGAFLEHY-----RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----VGEPVH 497 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~-----~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l----~~~~v~ 497 (691)
+.|||+|+.+-.-...+ ..+++.|.++||.|+++|+++-+..+ ..++++++++.+.+.++.+ +.+++.
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCCCee
Confidence 67999999987655555 47999999999999999999866553 4678888887777766654 568899
Q ss_pred EEEeChhHHHHHH----HHHhCcc-ccceEEEecCCCCCC
Q 005554 498 LIGNSIGGYFVAI----VACLWPA-VVKSVVLINSAGNVI 532 (691)
Q Consensus 498 lvGhS~GG~ial~----~A~~~P~-~V~~lVll~~~~~~~ 532 (691)
++||||||.+++. +++++++ +|++++++.+..+..
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999997 8888886 799999998876544
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-11 Score=125.39 Aligned_cols=269 Identities=18% Similarity=0.111 Sum_probs=138.2
Q ss_pred cCCCCcchHHHHHHHhhhHHHHHHHHHhhhccCCCCCceEEEEEEEcCeEEEEEEeCC-----CCCeEEEEcCCCCChHH
Q 005554 368 LSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQYTVAGK-----EGPAILLVHGFGAFLEH 442 (691)
Q Consensus 368 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~g~-----~~p~VlliHG~~~~~~~ 442 (691)
..|-++..+|-....+......-...............+.+.|-..+|..|+-.-.-+ +-|.||.+||+++....
T Consensus 19 ~~P~DFd~FW~~~l~e~~~~p~~~~l~~~~~~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~ 98 (320)
T PF05448_consen 19 PEPADFDAFWKKTLAELAAVPLDPELEPVEFPTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD 98 (320)
T ss_dssp ---TTHHHHHHHHHHHHHTS----EEEEES-SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGG
T ss_pred CCCccHHHHHHHHHHHHhcCCCCcEEEEeccCCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC
Confidence 3455778888766554433322221111111122234455667777888887432221 24689999999998777
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCcC-CCCCC-------------------cCCCHHHHHHHHHHHHHHh------CCcCE
Q 005554 443 YRDNIYDIADGGNRVWAITLLGFGR-SEKPN-------------------IVYTELMWSELLRDFTVEV------VGEPV 496 (691)
Q Consensus 443 ~~~~~~~L~~~G~~Vi~~D~~G~G~-S~~~~-------------------~~~s~~~~a~dl~~ll~~l------~~~~v 496 (691)
|...+. ++..||.|+.+|.+|+|. +.... +.+-+..+..|....++.+ +.+++
T Consensus 99 ~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI 177 (320)
T PF05448_consen 99 PFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRI 177 (320)
T ss_dssp HHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred cccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceE
Confidence 765543 567799999999999993 21100 0111222333444444433 23679
Q ss_pred EEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCC
Q 005554 497 HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR 576 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (691)
.+.|.|+||.+++.+|+..| +|++++...|...-.... .. ...... ....+..++..... .
T Consensus 178 ~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~--~~---~~~~~~------------~y~~~~~~~~~~d~-~ 238 (320)
T PF05448_consen 178 GVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA--LE---LRADEG------------PYPEIRRYFRWRDP-H 238 (320)
T ss_dssp EEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH--HH---HT--ST------------TTHHHHHHHHHHSC-T
T ss_pred EEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh--hh---cCCccc------------cHHHHHHHHhccCC-C
Confidence 99999999999999999987 599999988753210000 00 000000 00011111111100 0
Q ss_pred CccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe
Q 005554 577 RERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL 656 (691)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 656 (691)
.. ....++......|..+..+.|++|+++-.|-.|.+|||..+...+.......++.+.
T Consensus 239 ~~---------------------~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vy 297 (320)
T PF05448_consen 239 HE---------------------REPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVY 297 (320)
T ss_dssp HC---------------------HHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEE
T ss_pred cc---------------------cHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEec
Confidence 00 001122222234556678899999999999999999999777777666666777777
Q ss_pred -CCCCCCCccChHHHHHHHHHHHHh
Q 005554 657 -DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 657 -~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
..||-..-+ .-.+...+||.+
T Consensus 298 p~~~He~~~~---~~~~~~~~~l~~ 319 (320)
T PF05448_consen 298 PEYGHEYGPE---FQEDKQLNFLKE 319 (320)
T ss_dssp TT--SSTTHH---HHHHHHHHHHHH
T ss_pred cCcCCCchhh---HHHHHHHHHHhc
Confidence 788855432 336777778765
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=133.16 Aligned_cols=116 Identities=17% Similarity=0.179 Sum_probs=86.6
Q ss_pred CeEEEEEEeCCCCCeEEEEcCCCCCh-HHHHH-HHHHHh-cCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh
Q 005554 415 GYQIQYTVAGKEGPAILLVHGFGAFL-EHYRD-NIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV 491 (691)
Q Consensus 415 g~~i~y~~~g~~~p~VlliHG~~~~~-~~~~~-~~~~L~-~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l 491 (691)
+..+.+....+++|++|+|||++++. ..|.. +...+. ..+|+|+++|++|++.+..+....+.+.+++++..+++.+
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHH
Confidence 45566666676789999999998876 56654 444444 4579999999999854332222344555556666665554
Q ss_pred ------CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 492 ------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 492 ------~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
+.++++||||||||.+|..++.++|++|.++|+++|+..
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 347899999999999999999999999999999998753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.7e-11 Score=117.67 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCCCChHHHH---HHHHHHhcCCCEEEEeCCCCCcCCCCCC----------cCCCHHHHHHHHHHHHHHhC
Q 005554 426 EGPAILLVHGFGAFLEHYR---DNIYDIADGGNRVWAITLLGFGRSEKPN----------IVYTELMWSELLRDFTVEVV 492 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~---~~~~~L~~~G~~Vi~~D~~G~G~S~~~~----------~~~s~~~~a~dl~~ll~~l~ 492 (691)
+.|+||++||++++...+. .+...+.+.||.|+++|.+|++.+.... ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4789999999998877765 3445555679999999999987543210 01122333333344444443
Q ss_pred C--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 493 G--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 493 ~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
+ ++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3 579999999999999999999999999999988753
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-11 Score=134.49 Aligned_cols=127 Identities=20% Similarity=0.125 Sum_probs=99.4
Q ss_pred CceEEEEEEEcCeEEEEEEeCCCC----------CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCC--
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKEG----------PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-- 471 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~~----------p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~-- 471 (691)
...+.++...++.+|.|...+..+ |+|||+||++++...|..+++.|.++||+|+++|+||||.|...
T Consensus 416 ~~vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~ 495 (792)
T TIGR03502 416 ENVPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDAN 495 (792)
T ss_pred cccceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccc
Confidence 345668888899888887754332 48999999999999999999999988999999999999999432
Q ss_pred --------Cc--C-----------CCHHHHHHHHHHHHHHhC----------------CcCEEEEEeChhHHHHHHHHHh
Q 005554 472 --------NI--V-----------YTELMWSELLRDFTVEVV----------------GEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 472 --------~~--~-----------~s~~~~a~dl~~ll~~l~----------------~~~v~lvGhS~GG~ial~~A~~ 514 (691)
.. . .++++.+.|+..+...++ ..+++++||||||++++.++..
T Consensus 496 ~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 496 ASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 267889999999888776 2589999999999999999975
Q ss_pred Ccc-----------ccceEEEecCCCC
Q 005554 515 WPA-----------VVKSVVLINSAGN 530 (691)
Q Consensus 515 ~P~-----------~V~~lVll~~~~~ 530 (691)
... .+....+.+|.+.
T Consensus 576 an~~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 576 ANTPLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred cCccccCCccccccccceeeeecCCcc
Confidence 322 2456666665543
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-10 Score=120.54 Aligned_cols=250 Identities=16% Similarity=0.146 Sum_probs=147.8
Q ss_pred CeEEEEcCCCCChHHH-HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHH
Q 005554 428 PAILLVHGFGAFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 428 p~VlliHG~~~~~~~~-~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
|+||++..+.+..... +.+++.|.+ |+.|+..|+..-+..+.....++++++++.|.++++++|.+ ++++|+|+||.
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 7999999988765444 568899998 99999999987776555567889999999999999999877 99999999999
Q ss_pred HHHHHHHhC-----ccccceEEEecCCCCCCCchhhh-hhhhhhhcCChhh-----------------hhhH-HHHHH--
Q 005554 507 FVAIVACLW-----PAVVKSVVLINSAGNVIPEYSFL-QFSNERQASGPIR-----------------LGAQ-LLLFY-- 560 (691)
Q Consensus 507 ial~~A~~~-----P~~V~~lVll~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~~-~~~~~-- 560 (691)
.++.+++.. |.++++++++.++.+........ .........++.. .... ....+
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 988777664 66799999999986654311100 0000000000000 0000 00000
Q ss_pred ---HH--hhHHHHHHhhcCCCCccccH-H-HHHHHHHhcCCcc--hHHHHHHHhcccc-Cc------chHhhhcCCC-Cc
Q 005554 561 ---LR--LNISNFVKQCYPTRRERADD-W-LISEMLRASYDPG--VLVVLESIFSFKL-SL------PLNYLLEGFK-EK 623 (691)
Q Consensus 561 ---~~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~------~~~~~l~~i~-~P 623 (691)
.+ .....++............. . +.+.+.....-++ ..+.+..++.... .. ...-.+++|+ +|
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~p 340 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVA 340 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccc
Confidence 00 00111222221111111111 0 1121222111111 2223333332211 00 1112567899 99
Q ss_pred EEEEEeCCCCCCChhHHHHHHHHhC---C--CcEEEEe-CCCCCCCccC---hHHHHHHHHHHHHh
Q 005554 624 VLIIQGIKDPISDSKSKVAMFKEHC---A--GIVIREL-DAGHCPHDEK---PEEVNSIISEWIVT 680 (691)
Q Consensus 624 vLiI~G~~D~~vp~~~~~~~~~~~~---~--~~~~~~~-~~GH~~~~e~---pe~v~~~I~~fL~~ 680 (691)
+|.|.|++|.++|+... ..+..++ + ..+..+. ++||+..+-- .+++...|.+||.+
T Consensus 341 ll~V~ge~D~I~p~~qt-~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 341 LLTVEGENDDISGLGQT-KAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred eEEEeccCCCcCCHHHh-HHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 99999999999999854 4444443 3 2334444 9999877643 68999999999976
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.9e-11 Score=135.57 Aligned_cols=116 Identities=16% Similarity=0.059 Sum_probs=90.3
Q ss_pred cCeEEEEEEeCC----CCCeEEEEcCCCCChH----HHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHH
Q 005554 414 NGYQIQYTVAGK----EGPAILLVHGFGAFLE----HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485 (691)
Q Consensus 414 ~g~~i~y~~~g~----~~p~VlliHG~~~~~~----~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~ 485 (691)
+|.+|++..+.+ +.|+||++||++.+.. ........|+++||.|+++|+||+|.|......++ ...++|+.
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~~ 83 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAADGY 83 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccchHHH
Confidence 677787654432 3689999999987653 22235567888999999999999999987654444 45677777
Q ss_pred HHHHHhCC-----cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 486 DFTVEVVG-----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 486 ~ll~~l~~-----~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
++++.+.. .++.++|||+||.+++.+|..+|+.++++|..++...
T Consensus 84 ~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 84 DLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 77776532 5899999999999999999999999999999887643
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.4e-11 Score=118.83 Aligned_cols=99 Identities=20% Similarity=0.165 Sum_probs=83.2
Q ss_pred CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCc-CEEEEEeChhHH
Q 005554 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGE-PVHLIGNSIGGY 506 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~-~v~lvGhS~GG~ 506 (691)
++|+|+||.+++...|.++++.|...++.|+.++.+|.+. ......+++++++...+.+.....+ +++|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~--~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGD--DEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCT--TSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCC--CCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 4899999999999999999999987448999999999982 2234578999999888888776665 999999999999
Q ss_pred HHHHHHHhCc---cccceEEEecCC
Q 005554 507 FVAIVACLWP---AVVKSVVLINSA 528 (691)
Q Consensus 507 ial~~A~~~P---~~V~~lVll~~~ 528 (691)
+|.++|.+-- ..|..++++++.
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCS
T ss_pred HHHHHHHHHHHhhhccCceEEecCC
Confidence 9999997642 358999999975
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.3e-11 Score=121.87 Aligned_cols=235 Identities=17% Similarity=0.162 Sum_probs=124.7
Q ss_pred ceEEEEEEEcCeEEEEEEeCCC----CCeEEEEcCCCCChHHHHH-HHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHH
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRD-NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM 479 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~----~p~VlliHG~~~~~~~~~~-~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~ 479 (691)
.++.-.+.+.|.+|.-.-+-++ .|+||++.|+-+..+.+.. +.+.|..+|+.++++|.||.|.|..-....+.+.
T Consensus 164 ~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~ 243 (411)
T PF06500_consen 164 PIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSR 243 (411)
T ss_dssp EEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCH
T ss_pred CcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHH
Confidence 3444455567776654333222 3677777777777766544 4567889999999999999999864322222234
Q ss_pred HHHHHHHHHHHhCC---cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHH
Q 005554 480 WSELLRDFTVEVVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (691)
Q Consensus 480 ~a~dl~~ll~~l~~---~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (691)
+...+.+.+..... .+|.++|.||||++|.++|..++++++++|.++++.... +... .....
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~--ft~~----~~~~~--------- 308 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF--FTDP----EWQQR--------- 308 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG--GH-H----HHHTT---------
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh--hccH----HHHhc---------
Confidence 55566666665543 689999999999999999999999999999999863211 0000 00000
Q ss_pred HHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhh--cCCCCcEEEEEeCCCCC
Q 005554 557 LLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLL--EGFKEKVLIIQGIKDPI 634 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLiI~G~~D~~ 634 (691)
.+......+...+..... ..+ .....+..+.... ...+ .+..+|+|.+.|++|.+
T Consensus 309 ----~P~my~d~LA~rlG~~~~-~~~----------------~l~~el~~~SLk~--qGlL~~rr~~~plL~i~~~~D~v 365 (411)
T PF06500_consen 309 ----VPDMYLDVLASRLGMAAV-SDE----------------SLRGELNKFSLKT--QGLLSGRRCPTPLLAINGEDDPV 365 (411)
T ss_dssp ----S-HHHHHHHHHHCT-SCE--HH----------------HHHHHGGGGSTTT--TTTTTSS-BSS-EEEEEETT-SS
T ss_pred ----CCHHHHHHHHHHhCCccC-CHH----------------HHHHHHHhcCcch--hccccCCCCCcceEEeecCCCCC
Confidence 001111122222221111 011 1111222222111 1123 56789999999999999
Q ss_pred CChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 635 SDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 635 vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+|.++ .+++.....+.+...+ ... ....-+.-...+.+||+..
T Consensus 366 ~P~eD-~~lia~~s~~gk~~~~~~~~---~~~gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 366 SPIED-SRLIAESSTDGKALRIPSKP---LHMGYPQALDEIYKWLEDK 409 (411)
T ss_dssp S-HHH-HHHHHHTBTT-EEEEE-SSS---HHHHHHHHHHHHHHHHHHH
T ss_pred CCHHH-HHHHHhcCCCCceeecCCCc---cccchHHHHHHHHHHHHHh
Confidence 99985 4556666555555554 322 1222346677888888764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.2e-10 Score=113.48 Aligned_cols=104 Identities=24% Similarity=0.322 Sum_probs=88.7
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcC---CCEEEEeCCCCCcCCCCC------CcCCCHHHHHHHHHHHHHHhC-----
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADG---GNRVWAITLLGFGRSEKP------NIVYTELMWSELLRDFTVEVV----- 492 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~---G~~Vi~~D~~G~G~S~~~------~~~~s~~~~a~dl~~ll~~l~----- 492 (691)
+..++||+|.+|-.+.|..+++.|.+. .+.|+++.+.||-.++.. ...++++++++...++++.+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999988754 699999999999777654 357899999988888776643
Q ss_pred -CcCEEEEEeChhHHHHHHHHHhCc---cccceEEEecCCCC
Q 005554 493 -GEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAGN 530 (691)
Q Consensus 493 -~~~v~lvGhS~GG~ial~~A~~~P---~~V~~lVll~~~~~ 530 (691)
..+++|+|||+|+++++++..+.+ .+|.+++++-|+..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 356999999999999999999999 78999999998743
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.5e-11 Score=115.43 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=112.0
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcC-CCC--CCcC-----C---CHHHHHHHHHHHHHHhCC-
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGR-SEK--PNIV-----Y---TELMWSELLRDFTVEVVG- 493 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~-S~~--~~~~-----~---s~~~~a~dl~~ll~~l~~- 493 (691)
+.|.||++|++.+-....+.++..|++.||.|+++|+.+-.. ... .... . ..+...+++...++.+..
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 367999999988877788889999999999999999865433 111 1100 0 134556677666655532
Q ss_pred -----cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHH
Q 005554 494 -----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNF 568 (691)
Q Consensus 494 -----~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (691)
+++.++|+||||.+++.+|... ..++++|..-|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 5799999999999999999887 569999887761000
Q ss_pred HHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHh-
Q 005554 569 VKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH- 647 (691)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~- 647 (691)
........++++|+++++|++|+.++.+...+..+.+
T Consensus 135 ------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~ 172 (218)
T PF01738_consen 135 ------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALK 172 (218)
T ss_dssp ------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHH
T ss_pred ------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHH
Confidence 0001124567899999999999999998544443333
Q ss_pred --CCCcEEEEe-CCCCCCCccC--------hHHHHHHHHHHHHhh
Q 005554 648 --CAGIVIREL-DAGHCPHDEK--------PEEVNSIISEWIVTI 681 (691)
Q Consensus 648 --~~~~~~~~~-~~GH~~~~e~--------pe~v~~~I~~fL~~~ 681 (691)
....++++. +++|-..... .++..+.+.+||+++
T Consensus 173 ~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 173 AAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp CTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred hcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 467778887 7999766543 256677777888764
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.5e-11 Score=113.24 Aligned_cols=276 Identities=19% Similarity=0.151 Sum_probs=160.6
Q ss_pred HHHHHHhhhcCCCccCCCCcchHHHHHHHhhhHHHHHHHHHhhhccCCCCCceEEEEEEEcCeEEEEEEe----C-CCCC
Q 005554 354 YEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQYTVA----G-KEGP 428 (691)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~----g-~~~p 428 (691)
.+++.|..++ ..|-++..+|-.+..+..+............+.+....+.+.|..++|.+|.-... + ..-|
T Consensus 9 eeLk~Y~p~~----~~P~DFdeFW~~~l~e~~~~~~~p~l~~~d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P 84 (321)
T COG3458 9 EELKAYRPER----EAPDDFDEFWKKTLEEARKVPPEPVLERSDFTLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLP 84 (321)
T ss_pred HHHHhhCCCC----CCCCcHHHHHHHHHHHHhcCCCCceEEeccccCCceEEEEEEEeccCCceEEEEEEeecccCCccc
Confidence 4455555443 34557788886554433222211112222223344456667788888988875433 2 1358
Q ss_pred eEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCC----CC-c----------------CCCHHHHHHHHHHH
Q 005554 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK----PN-I----------------VYTELMWSELLRDF 487 (691)
Q Consensus 429 ~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~----~~-~----------------~~s~~~~a~dl~~l 487 (691)
.||-.||++++...|..++.. +..||.|+.+|.||.|.|.. +. . .|-+.....|+...
T Consensus 85 ~vV~fhGY~g~~g~~~~~l~w-a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~a 163 (321)
T COG3458 85 AVVQFHGYGGRGGEWHDMLHW-AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRA 163 (321)
T ss_pred eEEEEeeccCCCCCccccccc-cccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHH
Confidence 999999999998888665543 34599999999999998842 11 1 11111222333333
Q ss_pred HHH------hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHH
Q 005554 488 TVE------VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561 (691)
Q Consensus 488 l~~------l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (691)
++. ...+++.+-|.|.||.+++.+++..| +|++++.+-|...-.+..- .. .. .-.
T Consensus 164 ve~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i--~~-----------~~-----~~~ 224 (321)
T COG3458 164 VEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAI--EL-----------AT-----EGP 224 (321)
T ss_pred HHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhhe--ee-----------cc-----cCc
Confidence 332 33478999999999999999999887 6999998877532111100 00 00 000
Q ss_pred HhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHH
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 641 (691)
...+..+++..-+. .. ..+......+..+....+++|+|+..|-.|++|||..+.
T Consensus 225 ydei~~y~k~h~~~-----e~--------------------~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqF 279 (321)
T COG3458 225 YDEIQTYFKRHDPK-----EA--------------------EVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQF 279 (321)
T ss_pred HHHHHHHHHhcCch-----HH--------------------HHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhH
Confidence 01111222211110 00 111111223445567789999999999999999999777
Q ss_pred HHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 642 AMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 642 ~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
..+........+.+. .-+|.-. |.-..+.+..|++..
T Consensus 280 A~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 280 AAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred HHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 766666555666665 4446433 444455566777654
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.5e-11 Score=110.49 Aligned_cols=251 Identities=14% Similarity=0.201 Sum_probs=146.8
Q ss_pred EEEcCeEEEEEEeCCC--CC-eEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc---CCCHHHHHH-H
Q 005554 411 WRWNGYQIQYTVAGKE--GP-AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSE-L 483 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~~--~p-~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~---~~s~~~~a~-d 483 (691)
-..||+.+....+... .+ .|++-.+.+.....|++++..+++.||.|.++|+||.|.|+.+.. .+.+.||+. |
T Consensus 11 ~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D 90 (281)
T COG4757 11 PAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLD 90 (281)
T ss_pred ccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcc
Confidence 3446766665555433 23 566666677888899999999999999999999999999987543 366666654 4
Q ss_pred HHHHHH----HhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHH
Q 005554 484 LRDFTV----EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLF 559 (691)
Q Consensus 484 l~~ll~----~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (691)
+...++ .+...+...|||||||.+.-.+. +++ ++.+....+....... + ..............+....+..
T Consensus 91 ~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg-~--m~~~~~l~~~~l~~lv~p~lt~ 165 (281)
T COG4757 91 FPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSG-W--MGLRERLGAVLLWNLVGPPLTF 165 (281)
T ss_pred hHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEecccccccc-c--hhhhhcccceeeccccccchhh
Confidence 544444 34557899999999998765554 455 4555555544322111 0 0010000111111111122222
Q ss_pred HHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhH
Q 005554 560 YLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639 (691)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~ 639 (691)
+.......++ ...+...-....++.+....+... +.........+..+.+.+|++++...+|+.+|+.
T Consensus 166 w~g~~p~~l~-----G~G~d~p~~v~RdW~RwcR~p~y~------fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~A- 233 (281)
T COG4757 166 WKGYMPKDLL-----GLGSDLPGTVMRDWARWCRHPRYY------FDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPA- 233 (281)
T ss_pred ccccCcHhhc-----CCCccCcchHHHHHHHHhcCcccc------ccChhHhHHHHHHHHhcCceeeeccCCCCcCCHH-
Confidence 2221111111 112233333334443332222110 0001111244566788999999999999999998
Q ss_pred HHHHHHHhCCCcEEEEe----C---CCCCCCccCh-HHHHHHHHHHH
Q 005554 640 KVAMFKEHCAGIVIREL----D---AGHCPHDEKP-EEVNSIISEWI 678 (691)
Q Consensus 640 ~~~~~~~~~~~~~~~~~----~---~GH~~~~e~p-e~v~~~I~~fL 678 (691)
..+.+....+|+.+... . -||+-..-+| |.+.+.+.+|+
T Consensus 234 s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 234 SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 56777777777765432 2 5999998887 88888888775
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.3e-09 Score=111.68 Aligned_cols=101 Identities=17% Similarity=0.110 Sum_probs=73.7
Q ss_pred CCeEEEEcCCC---CChHHHHHHHHHHhc-CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHH---HHHhCC--cCEE
Q 005554 427 GPAILLVHGFG---AFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF---TVEVVG--EPVH 497 (691)
Q Consensus 427 ~p~VlliHG~~---~~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~l---l~~l~~--~~v~ 497 (691)
.|+||++||.| ++...|..++..|++ .|+.|+.+|+|.......+. .+++..+.+..+ .+.+++ ++++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~---~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ---AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC---cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 68999999976 566778888888887 48999999999755432222 344444433333 344554 5799
Q ss_pred EEEeChhHHHHHHHHHhC------ccccceEEEecCCCC
Q 005554 498 LIGNSIGGYFVAIVACLW------PAVVKSVVLINSAGN 530 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~------P~~V~~lVll~~~~~ 530 (691)
|+|+|+||.+++.++... +..++++|++.|...
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 999999999999988753 357899999988643
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.5e-10 Score=101.37 Aligned_cols=169 Identities=20% Similarity=0.170 Sum_probs=115.2
Q ss_pred CCeEEEEcCC---C--CChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CC-CHHHHHHHHHHHHHHhCC-cC-EE
Q 005554 427 GPAILLVHGF---G--AFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VY-TELMWSELLRDFTVEVVG-EP-VH 497 (691)
Q Consensus 427 ~p~VlliHG~---~--~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~-s~~~~a~dl~~ll~~l~~-~~-v~ 497 (691)
.|..|++|-- + .+...-..++..|.+.||.++.+|+||.|+|.+... .. -.+|.. .+.++++.... .+ +.
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~-aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAA-AALDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHH-HHHHHHHhhCCCchhhh
Confidence 6778888852 2 334445567888999999999999999999987642 22 233333 33444444433 23 46
Q ss_pred EEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCC
Q 005554 498 LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRR 577 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (691)
+.|+|+|+.|++.+|.+.|+ ....|.+.+..+. +.
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~-----------------------------------------~d--- 141 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA-----------------------------------------YD--- 141 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccCCCCc-----------------------------------------hh---
Confidence 88999999999999999886 5555555553110 00
Q ss_pred ccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEeC
Q 005554 578 ERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELD 657 (691)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 657 (691)
...+....+|+++|+|+.|.+++.....++.+. .+-..+++.+
T Consensus 142 ------------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~ 184 (210)
T COG2945 142 ------------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPG 184 (210)
T ss_pred ------------------------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecC
Confidence 001345578999999999999998765555444 3334444559
Q ss_pred CCCCCCccChHHHHHHHHHHHH
Q 005554 658 AGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 658 ~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
++|+.+-. -..+.+.|.+|+.
T Consensus 185 a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc-HHHHHHHHHHHhh
Confidence 99987754 6688899999985
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.4e-10 Score=110.42 Aligned_cols=176 Identities=21% Similarity=0.165 Sum_probs=102.0
Q ss_pred CCCCeEEEEcCCCCChHHHHHHHH-HHhcCCCEEEEeCCCC------CcC---CCC------CCcCC---CHHHHHHHHH
Q 005554 425 KEGPAILLVHGFGAFLEHYRDNIY-DIADGGNRVWAITLLG------FGR---SEK------PNIVY---TELMWSELLR 485 (691)
Q Consensus 425 ~~~p~VlliHG~~~~~~~~~~~~~-~L~~~G~~Vi~~D~~G------~G~---S~~------~~~~~---s~~~~a~dl~ 485 (691)
+..++|||+||+|.+...|..+.. .+.....+++.++-|. .|. +-. +.... .+...++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 347899999999999977766555 2333357787776431 122 111 11111 2333344455
Q ss_pred HHHHHh-----CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHH
Q 005554 486 DFTVEV-----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY 560 (691)
Q Consensus 486 ~ll~~l-----~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (691)
++++.. ..++++|.|+|.||++++.++.++|+.+.++|.+++.......
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-------------------------- 145 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-------------------------- 145 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------------------------
Confidence 555432 2367999999999999999999999999999999975211000
Q ss_pred HHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHH
Q 005554 561 LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSK 640 (691)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~ 640 (691)
... ..-..-++|++++||..|.++|.+..
T Consensus 146 ----------------~~~-----------------------------------~~~~~~~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 146 ----------------LED-----------------------------------RPEALAKTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp ----------------CHC-----------------------------------CHCCCCTS-EEEEEETT-SSSTHHHH
T ss_pred ----------------ccc-----------------------------------cccccCCCcEEEEecCCCCcccHHHH
Confidence 000 00011168999999999999998643
Q ss_pred ---HHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhh
Q 005554 641 ---VAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 641 ---~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+.+++...+.+++.. ++||-+. .+..+.+.+||++.
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 3344444566788888 6999775 45557788888764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.5e-10 Score=92.79 Aligned_cols=75 Identities=27% Similarity=0.348 Sum_probs=65.3
Q ss_pred CeEEEEEEeCCC---CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc-CCCHHHHHHHHHHHHH
Q 005554 415 GYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFTV 489 (691)
Q Consensus 415 g~~i~y~~~g~~---~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~dl~~ll~ 489 (691)
|.+|+|..+.++ +.+|+++||++.++..|..+++.|+++||.|+++|+||||.|..... .-+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 578888888765 44899999999999999999999999999999999999999987543 3478999999998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-09 Score=106.91 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=70.1
Q ss_pred EEEEcCeEEEEEEeCC-CCCeEEEEcCCCCC---hHHHHHHHHHHhcCCCEEEEeCCC----CCcCCCCCCcCCCHHHHH
Q 005554 410 IWRWNGYQIQYTVAGK-EGPAILLVHGFGAF---LEHYRDNIYDIADGGNRVWAITLL----GFGRSEKPNIVYTELMWS 481 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~-~~p~VlliHG~~~~---~~~~~~~~~~L~~~G~~Vi~~D~~----G~G~S~~~~~~~s~~~~a 481 (691)
.+..+-..+.|..... ....||||.|.+.. ......+++.|.+.||.|+-+-+. |+|.+ +++.-+
T Consensus 15 ~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~ 87 (303)
T PF08538_consen 15 HYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDV 87 (303)
T ss_dssp EECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHH
T ss_pred EECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHH
Confidence 3333444455555443 24589999998764 344567888887779999999754 55543 566666
Q ss_pred HHHHHHHHHh--------CCcCEEEEEeChhHHHHHHHHHhCc-----cccceEEEecCCCCC
Q 005554 482 ELLRDFTVEV--------VGEPVHLIGNSIGGYFVAIVACLWP-----AVVKSVVLINSAGNV 531 (691)
Q Consensus 482 ~dl~~ll~~l--------~~~~v~lvGhS~GG~ial~~A~~~P-----~~V~~lVll~~~~~~ 531 (691)
++|.++++.+ +.++|+|+|||.|+.-++.|..... ..|+++||-+|..+.
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 6776666543 2468999999999999999998752 569999999997543
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-09 Score=102.26 Aligned_cols=214 Identities=12% Similarity=0.072 Sum_probs=111.6
Q ss_pred EEEEE-cCeEEEEEEeCCC------CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCC-cCCCCCCcCCCHHHH
Q 005554 409 RIWRW-NGYQIQYTVAGKE------GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPNIVYTELMW 480 (691)
Q Consensus 409 ~~~~~-~g~~i~y~~~g~~------~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~-G~S~~~~~~~s~~~~ 480 (691)
+.+.. +|.+|+.++..|. .++||+.+||+.....|..++.+|+..||+|+.+|...| |.|++.-..+++...
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g 84 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIG 84 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHh
Confidence 34455 6788888877542 479999999999999999999999999999999998766 899988889999888
Q ss_pred HHHHHHHHHH---hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHH
Q 005554 481 SELLRDFTVE---VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL 557 (691)
Q Consensus 481 a~dl~~ll~~---l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (691)
.+++..+++. .+..++-|+.-|+.|-+|+..|++- .+.-+|+..+..+.... .......
T Consensus 85 ~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~T-----Le~al~~----------- 146 (294)
T PF02273_consen 85 KASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDT-----LEKALGY----------- 146 (294)
T ss_dssp HHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHH-----HHHHHSS-----------
T ss_pred HHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHH-----HHHHhcc-----------
Confidence 8888776654 5678899999999999999999853 48888877765331100 0000000
Q ss_pred HHHHHhhHHHHHHhhcCCCCc-------ccc-HHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEe
Q 005554 558 LFYLRLNISNFVKQCYPTRRE-------RAD-DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
.++.......+. .+. +.+...-.... +..-......++.+.+|++.+++
T Consensus 147 ---------Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~--------------w~~l~ST~~~~k~l~iP~iaF~A 203 (294)
T PF02273_consen 147 ---------DYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHG--------------WDDLDSTINDMKRLSIPFIAFTA 203 (294)
T ss_dssp ----------GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT---------------SSHHHHHHHHTT--S-EEEEEE
T ss_pred ---------chhhcchhhCCCcccccccccchHHHHHHHHHcC--------------CccchhHHHHHhhCCCCEEEEEe
Confidence 000000000000 011 11111111111 11111234567889999999999
Q ss_pred CCCCCCChhHHHHHHHHhC-CCcEEEEe-CCCCCCC
Q 005554 630 IKDPISDSKSKVAMFKEHC-AGIVIREL-DAGHCPH 663 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~~GH~~~ 663 (691)
++|.++...+..+.+.... +.+++..+ |++|.+.
T Consensus 204 ~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 204 NDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp TT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred CCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 9999999987777776554 45666666 9999765
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.9e-09 Score=102.50 Aligned_cols=174 Identities=17% Similarity=0.143 Sum_probs=126.6
Q ss_pred CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCC-cCCCCCC-c----------CCCHHHHHHHHHHHHHHhC---
Q 005554 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPN-I----------VYTELMWSELLRDFTVEVV--- 492 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~-G~S~~~~-~----------~~s~~~~a~dl~~ll~~l~--- 492 (691)
|.||++|++.+-....+.+++.|++.||.|+++|+-+. |.+.... . ..+..+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999988888999999999999999999998763 3322211 0 1223566777777777663
Q ss_pred ---CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHH
Q 005554 493 ---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFV 569 (691)
Q Consensus 493 ---~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (691)
.+++.++|+||||.+++.++...| .|++.|..-+......
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~------------------------------------ 150 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD------------------------------------ 150 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc------------------------------------
Confidence 356999999999999999999988 6999888776422100
Q ss_pred HhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhC-
Q 005554 570 KQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC- 648 (691)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~- 648 (691)
. ....++++|+|++.|+.|..+|.+....+.+...
T Consensus 151 -------~-------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~ 186 (236)
T COG0412 151 -------T-------------------------------------ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALED 186 (236)
T ss_pred -------c-------------------------------------cccccccCcEEEEecccCCCCChhHHHHHHHHHHh
Confidence 0 0024779999999999999999875444444333
Q ss_pred --CCcEEEEe-CCCCCCCccC-----------hHHHHHHHHHHHHhhh
Q 005554 649 --AGIVIREL-DAGHCPHDEK-----------PEEVNSIISEWIVTIE 682 (691)
Q Consensus 649 --~~~~~~~~-~~GH~~~~e~-----------pe~v~~~I~~fL~~~~ 682 (691)
....+.+. ++.|-.+.+. .+.-.+.+.+|+++..
T Consensus 187 ~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 187 AGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 24667777 7779766432 2567788888988764
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.9e-09 Score=97.17 Aligned_cols=87 Identities=28% Similarity=0.326 Sum_probs=66.7
Q ss_pred EEEEcCCCCChHHHHH--HHHHHhcCC--CEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhH
Q 005554 430 ILLVHGFGAFLEHYRD--NIYDIADGG--NRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (691)
Q Consensus 430 VlliHG~~~~~~~~~~--~~~~L~~~G--~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG 505 (691)
||++||+.++....+. +.+.+.+.+ ..++++|++ .+.....+.+..+++....+.+.|||.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChHH
Confidence 7999999888665543 455566554 456666664 2466677888889988887779999999999
Q ss_pred HHHHHHHHhCccccceEEEecCCCC
Q 005554 506 YFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 506 ~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
..|..+|.+++ +++ ||++|+..
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCCC
Confidence 99999999986 444 89999744
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2e-09 Score=102.80 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=114.1
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCC--CCcC----CCCCCcCCCHH-------HHHHHHHHHHHHhCC
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL--GFGR----SEKPNIVYTEL-------MWSELLRDFTVEVVG 493 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~--G~G~----S~~~~~~~s~~-------~~a~dl~~ll~~l~~ 493 (691)
.|+||++||+|++...+.+....+..+ +.++.+--+ -.|. +......++.+ .+++.+..+.+..++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 668999999999999888866666664 666665311 0111 11111233333 345555556666666
Q ss_pred --cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh
Q 005554 494 --EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 494 --~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
++++++|+|-||++++.+..++|+.++++|++++.......
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------------- 139 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------------- 139 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------------
Confidence 78999999999999999999999999999999985221000
Q ss_pred hcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHH---HHHHHhC
Q 005554 572 CYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV---AMFKEHC 648 (691)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~---~~~~~~~ 648 (691)
. .-..-.+|+++++|..|++||..... +.+....
T Consensus 140 -----~--------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g 176 (207)
T COG0400 140 -----L--------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASG 176 (207)
T ss_pred -----c--------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcC
Confidence 0 00122679999999999999986433 3344445
Q ss_pred CCcEEEEeCCCCCCCccChHHHHHHHHHHHHh
Q 005554 649 AGIVIRELDAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 649 ~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.++.....++||.+..+ ..+.+.+|+.+
T Consensus 177 ~~v~~~~~~~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 177 ADVEVRWHEGGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred CCEEEEEecCCCcCCHH----HHHHHHHHHHh
Confidence 66777777899977654 34555667765
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.2e-09 Score=102.28 Aligned_cols=104 Identities=20% Similarity=0.218 Sum_probs=74.7
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHH-Hh------CCcCEEE
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV-EV------VGEPVHL 498 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~-~l------~~~~v~l 498 (691)
.=|.|||+||+......|..++++++.+||-|+++|+...+........-...+..+.+.+-++ .+ +..++.|
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 3589999999998888899999999999999999997664432111111112222222222111 11 2368999
Q ss_pred EEeChhHHHHHHHHHhC-----ccccceEEEecCCC
Q 005554 499 IGNSIGGYFVAIVACLW-----PAVVKSVVLINSAG 529 (691)
Q Consensus 499 vGhS~GG~ial~~A~~~-----P~~V~~lVll~~~~ 529 (691)
.|||-||-++..++..+ +.+++++|+++|..
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999887 55899999999974
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.7e-08 Score=105.74 Aligned_cols=275 Identities=17% Similarity=0.116 Sum_probs=153.2
Q ss_pred EEEEEEcCeEEEEEEe--C-CCCCeEEEEcCCCCChHHHHH------HHHHHhcCCCEEEEeCCCCCcCCCC-----C--
Q 005554 408 TRIWRWNGYQIQYTVA--G-KEGPAILLVHGFGAFLEHYRD------NIYDIADGGNRVWAITLLGFGRSEK-----P-- 471 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~--g-~~~p~VlliHG~~~~~~~~~~------~~~~L~~~G~~Vi~~D~~G~G~S~~-----~-- 471 (691)
..+.+.||+-+..... + .++|+|++.||+.+++..|.. ++-.|+++||.|+.-+.||--.|.. +
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcC
Confidence 3444557765444332 2 357999999999999888853 4556889999999999999776653 1
Q ss_pred ---CcCCCHHHHH-----HHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCcc---ccceEEEecCCCCCCCchhhhhh
Q 005554 472 ---NIVYTELMWS-----ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGNVIPEYSFLQF 540 (691)
Q Consensus 472 ---~~~~s~~~~a-----~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~---~V~~lVll~~~~~~~~~~~~~~~ 540 (691)
.-++++.+++ +.|..+++.-+.++++.||||.|+.+...++...|+ +|+.+++++|+............
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~ 210 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNK 210 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHH
Confidence 1245666654 344444555566899999999999999999888775 79999999998643311000000
Q ss_pred hhhh-------------hcCChhhh--hhHHHHH------HHHhhHHHHHHhhcC----------------CCCccccHH
Q 005554 541 SNER-------------QASGPIRL--GAQLLLF------YLRLNISNFVKQCYP----------------TRRERADDW 583 (691)
Q Consensus 541 ~~~~-------------~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~----------------~~~~~~~~~ 583 (691)
.... ...++... ....... ........++..... ..+......
T Consensus 211 ~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk 290 (403)
T KOG2624|consen 211 FLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVK 290 (403)
T ss_pred hhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHH
Confidence 0000 00000000 0000000 000000111111111 111111111
Q ss_pred HHHHHHHhcCCcchHH----HHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcE-EE--Ee
Q 005554 584 LISEMLRASYDPGVLV----VLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV-IR--EL 656 (691)
Q Consensus 584 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~-~~--~~ 656 (691)
....+........+.. .......+....+....+.++++||.+.+|++|.++.+++....+........ .. +.
T Consensus 291 ~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~ 370 (403)
T KOG2624|consen 291 NIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIP 370 (403)
T ss_pred HHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCC
Confidence 1111111110000000 00112222333444556788999999999999999999987666665543333 11 23
Q ss_pred CCCCCCCc---cChHHHHHHHHHHHHhhh
Q 005554 657 DAGHCPHD---EKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 657 ~~GH~~~~---e~pe~v~~~I~~fL~~~~ 682 (691)
+-.|+=++ +.++++.+.|.+.++...
T Consensus 371 ~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 371 EYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred CccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 77885443 458999999999998665
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.6e-08 Score=111.79 Aligned_cols=122 Identities=13% Similarity=0.061 Sum_probs=90.2
Q ss_pred EEEEEcCeEEEE-EEe------CCCCCeEEEEcCCCCCh--HHHHHHHHHHhcCCCEEEEeCCCCCcCCCC--------C
Q 005554 409 RIWRWNGYQIQY-TVA------GKEGPAILLVHGFGAFL--EHYRDNIYDIADGGNRVWAITLLGFGRSEK--------P 471 (691)
Q Consensus 409 ~~~~~~g~~i~y-~~~------g~~~p~VlliHG~~~~~--~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~--------~ 471 (691)
.+...+|.+|.+ ..+ ..+.|+||++||..+.. ..|......|.++||.|+.++.||-|.=.. .
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~ 499 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL 499 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh
Confidence 344568888885 222 12368999999976654 346666678888999999999999765432 1
Q ss_pred CcCCCHHHHHHHHHHHHHHh--CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 472 NIVYTELMWSELLRDFTVEV--VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 472 ~~~~s~~~~a~dl~~ll~~l--~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
....+++|+.+.+..+++.= ..+++.+.|.|.||+++..++.++|++++++|+..|..+
T Consensus 500 ~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 500 KKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred cCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 12356777777666666441 226799999999999999999999999999999988643
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.2e-09 Score=97.73 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=61.7
Q ss_pred EEEEcCCCCC-hHHHHH-HHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHH
Q 005554 430 ILLVHGFGAF-LEHYRD-NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (691)
Q Consensus 430 VlliHG~~~~-~~~~~~-~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~i 507 (691)
|+++||++++ ...|.+ +.+.|... ++|..+|+ + .-+.++|.+.+.+.+..+. ++++|||||+|+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~----~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D----NPDLDEWVQALDQAIDAID-EPTILVAHSLGCLT 68 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T----S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C----CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHH
Confidence 6899999876 455665 44556665 78887776 1 2367788888887777653 56999999999999
Q ss_pred HHHHH-HhCccccceEEEecCC
Q 005554 508 VAIVA-CLWPAVVKSVVLINSA 528 (691)
Q Consensus 508 al~~A-~~~P~~V~~lVll~~~ 528 (691)
++.++ .....+|++++|++|+
T Consensus 69 ~l~~l~~~~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 69 ALRWLAEQSQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHTCCSSEEEEEEES--
T ss_pred HHHHHhhcccccccEEEEEcCC
Confidence 99999 6677899999999986
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.7e-08 Score=98.53 Aligned_cols=118 Identities=19% Similarity=0.111 Sum_probs=76.2
Q ss_pred cCeEEEEEEeCC------CCCeEEEEcCCCCCh-HHHHHH---------HHHHhcCCCEEEEeCCCCCcCCCCCCcCCCH
Q 005554 414 NGYQIQYTVAGK------EGPAILLVHGFGAFL-EHYRDN---------IYDIADGGNRVWAITLLGFGRSEKPNIVYTE 477 (691)
Q Consensus 414 ~g~~i~y~~~g~------~~p~VlliHG~~~~~-~~~~~~---------~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~ 477 (691)
||.+|....+-+ +-|+||..|+++... ...... ...++++||.|+..|.||.|.|.........
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 466666544433 246899999998653 111111 1128899999999999999999976544332
Q ss_pred HHHHHH---HHHHHHHhCC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCC
Q 005554 478 LMWSEL---LRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 478 ~~~a~d---l~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~ 532 (691)
.-++| +.+++..... .+|.++|.|++|..++.+|+..|..+++++...+.....
T Consensus 81 -~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 81 -NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp -HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred -hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 23444 4444444433 579999999999999999998888899999988865443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-08 Score=97.74 Aligned_cols=101 Identities=23% Similarity=0.200 Sum_probs=74.1
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHH---HHHHHHHHHHHh-------CCcCE
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM---WSELLRDFTVEV-------VGEPV 496 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~---~a~dl~~ll~~l-------~~~~v 496 (691)
=|.|+|+||+......|..++.+++.+||-|+++++-..-. +...-.+++ .++.+..-++++ ++.++
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 47899999999999999999999999999999999865321 222222222 223333333332 23789
Q ss_pred EEEEeChhHHHHHHHHHhCc--cccceEEEecCCCC
Q 005554 497 HLIGNSIGGYFVAIVACLWP--AVVKSVVLINSAGN 530 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~P--~~V~~lVll~~~~~ 530 (691)
.++|||.||-.|..+|..+. -.+.+||-++|...
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 99999999999999998874 25889999998643
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-08 Score=126.89 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC-cCEEEEEeChh
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIG 504 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~-~~v~lvGhS~G 504 (691)
++++++|+||++++...|..++..|.. +++|+++|.+|+|.+ ....++++++++++.+.++.+.. .+++++|||||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~--~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGP--MQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCC--CCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 468899999999999999999999976 499999999999865 23467999999999999988764 58999999999
Q ss_pred HHHHHHHHHh---CccccceEEEecCC
Q 005554 505 GYFVAIVACL---WPAVVKSVVLINSA 528 (691)
Q Consensus 505 G~ial~~A~~---~P~~V~~lVll~~~ 528 (691)
|.++..+|.+ .++++..++++++.
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999986 57789999999874
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.7e-08 Score=113.18 Aligned_cols=226 Identities=11% Similarity=-0.039 Sum_probs=120.1
Q ss_pred HHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhC--------------------CcCEEEEEeChh
Q 005554 445 DNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--------------------GEPVHLIGNSIG 504 (691)
Q Consensus 445 ~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~--------------------~~~v~lvGhS~G 504 (691)
.....|..+||.|+..|.||.|.|++....+..+ -.+|..++++-+. ..+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 3557788899999999999999998864333333 3344444443332 268999999999
Q ss_pred HHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHH
Q 005554 505 GYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584 (691)
Q Consensus 505 G~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (691)
|.+++.+|+..|+.++++|..++.......+....... ....+.......+... .................
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~-~~~g~~ged~d~l~~~--------~~~r~~~~~~~~~~~~~ 419 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVR-APGGYQGEDLDVLAEL--------TYSRNLLAGDYLRHNEA 419 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCcee-ccCCcCCcchhhHHHH--------hhhcccCcchhhcchHH
Confidence 99999999998888999999877643211100000000 0000000000000000 00000000000000000
Q ss_pred HHHHHHhcCCcchHHHH-HHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHh---CCCcEEEEeCCCC
Q 005554 585 ISEMLRASYDPGVLVVL-ESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH---CAGIVIRELDAGH 660 (691)
Q Consensus 585 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~~~GH 660 (691)
.+........ ..... .....+....+....+.+|++|+|+|+|..|..++++...+.+..+ ....++.+.+++|
T Consensus 420 ~~~~~~~~~~--~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H 497 (767)
T PRK05371 420 CEKLLAELTA--AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGH 497 (767)
T ss_pred HHHHHhhhhh--hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 0100000000 00000 0000001122334567799999999999999999987555656544 2345665557889
Q ss_pred CCCc-cChHHHHHHHHHHHHhhh
Q 005554 661 CPHD-EKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 661 ~~~~-e~pe~v~~~I~~fL~~~~ 682 (691)
.... ..+.++.+.+..|++...
T Consensus 498 ~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 498 VYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred cCCCchhHHHHHHHHHHHHHhcc
Confidence 6443 345677888888887653
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.3e-09 Score=106.16 Aligned_cols=256 Identities=16% Similarity=0.117 Sum_probs=138.7
Q ss_pred CCeEEEEcCCCCChHHH-----HHHHHHHhcCCCEEEEeCCCCCcCCCCCC--cCCCHHHHHHHHHHHHHHhCCcCEEEE
Q 005554 427 GPAILLVHGFGAFLEHY-----RDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLI 499 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~-----~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~dl~~ll~~l~~~~v~lv 499 (691)
++|||++|-+-.....| ..++..|.++|+.|+.+++++=..+.... .+|-.+.+.+.+..+.+..+.+++.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 67999999976554443 36888899999999999998765554321 233334444566666667777999999
Q ss_pred EeChhHHHHHHHHHhCccc-cceEEEecCCCCCCCchhh--------hhhhhh--hhcCChhhhhhHHHHHHH---HhhH
Q 005554 500 GNSIGGYFVAIVACLWPAV-VKSVVLINSAGNVIPEYSF--------LQFSNE--RQASGPIRLGAQLLLFYL---RLNI 565 (691)
Q Consensus 500 GhS~GG~ial~~A~~~P~~-V~~lVll~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~ 565 (691)
|+|.||++...+++.++.+ |++++++.+..++...... ...... .....+..........+. ...+
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw 266 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIW 266 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccch
Confidence 9999999999999999887 9999998876544321100 000000 000000000000000000 0011
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHhcCCcc--hHHHHHHHhcccc-------CcchHhhhcCCCCcEEEEEeCCCCCCC
Q 005554 566 SNFVKQCYPTRRERADDWLISEMLRASYDPG--VLVVLESIFSFKL-------SLPLNYLLEGFKEKVLIIQGIKDPISD 636 (691)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~l~~i~~PvLiI~G~~D~~vp 636 (691)
..++..+... .....-++.........-++ ....++.++.... -....-.+..|+||++++.|++|.++|
T Consensus 267 ~~fV~nyl~g-e~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P 345 (445)
T COG3243 267 NYFVNNYLDG-EQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAP 345 (445)
T ss_pred HHHHHHhcCC-CCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCC
Confidence 2222222211 11111111000000000000 1111212111110 001112577999999999999999999
Q ss_pred hhHHHHHHHHhCCC-cEEEEeCCCCCCCccCh-H----H----HHHHHHHHHHhhhCC
Q 005554 637 SKSKVAMFKEHCAG-IVIRELDAGHCPHDEKP-E----E----VNSIISEWIVTIESK 684 (691)
Q Consensus 637 ~~~~~~~~~~~~~~-~~~~~~~~GH~~~~e~p-e----~----v~~~I~~fL~~~~~~ 684 (691)
.+. .-..++..++ ++++..++||...+-+| . + .-..+..|+.+...+
T Consensus 346 ~~S-v~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~ 402 (445)
T COG3243 346 WSS-VYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEH 402 (445)
T ss_pred HHH-HHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccC
Confidence 984 4555666666 55555599997665442 1 1 223677788775543
|
|
| >PF03441 FAD_binding_7: FAD binding domain of DNA photolyase from Prosite | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.6e-10 Score=114.45 Aligned_cols=59 Identities=27% Similarity=0.402 Sum_probs=49.3
Q ss_pred cCchHHHHHHHHHHHhhcCCCCCchHHHHHHhhhhcCCCCCcccccccccccccccchhHHHHHHHHHhh
Q 005554 292 GGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEK 361 (691)
Q Consensus 292 gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~LSpyL~~g~~~~~~~~~~~~~~~~ 361 (691)
|||++|+++|+.|++ +++..|.+.|| .|..++||+|||||+||+||+|+|++++.+...
T Consensus 1 GGe~~A~~~L~~Fl~----~~l~~Y~~~r~-------~p~~~~~S~LSpyL~~G~lS~r~v~~~~~~~~~ 59 (277)
T PF03441_consen 1 GGETAALKRLEEFLK----ERLADYGEQRD-------DPAADGTSRLSPYLNFGCLSPREVYRAVKKAQE 59 (277)
T ss_dssp SSHHHHHHHHHHHHH----HCGGGHHHHTT--------TTSTTS---HHHHHTTSS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH----HHHHhhchhcc-------CCCcCCcCcccHHHhCCCcCHHHHHHHHHHHhh
Confidence 899999999999994 78999999886 357789999999999999999999999988775
|
; InterPro: IPR005101 This entry represents a multi-helical domain composed of two all-alpha subdomains that is found as the C-terminal domain in cryptochrome proteins, as well as at the N-terminal of DNA photolyase where it acts as a FAD-binding domain (the N-terminal of DNA photolyase binds a light-harvesting cofactor). Photolyases and cryptochromes are related flavoproteins that bind FAD. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes (CRY1 and CRY2) are blue light photoreceptors that mediate blue light-induced gene expression [, ]. DNA photolyases are DNA repair enzymes that repair mismatched pyrimidine dimers induced by exposure to ultra-violet light. They bind to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), they catalyse dimer splitting, breaking the cyclobutane ring joining the two pyrimidines of the dimer so as to split them into the constituent monomers; this process is called photoreactivation. DNA photolyases require two choromophore-cofactors for their activity. All monomers contain a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm [, ].; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 3ZXS_A 1DNP_A 2XRZ_B 2XRY_A 2VTB_A 2J4D_B 2IJG_X 3TVS_A 2E0I_D .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-07 Score=83.58 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=124.9
Q ss_pred CCeEEEEcCCCCC--hHHHHHHHHHHhcCCCEEEEeCCCCCcC-----CCCCC-cCCCHHHHHHHHHHHHHHhCCcCEEE
Q 005554 427 GPAILLVHGFGAF--LEHYRDNIYDIADGGNRVWAITLLGFGR-----SEKPN-IVYTELMWSELLRDFTVEVVGEPVHL 498 (691)
Q Consensus 427 ~p~VlliHG~~~~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~-----S~~~~-~~~s~~~~a~dl~~ll~~l~~~~v~l 498 (691)
.-+||+.||.|.+ +..+..++..|+.+|+.|..++++-.-. -.+|+ ...-...+...+.++...+...+.++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 3489999998776 5567778899999999999999875422 22222 22334567777888888887789999
Q ss_pred EEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCc
Q 005554 499 IGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRE 578 (691)
Q Consensus 499 vGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (691)
-|+||||-++.++|..-...|+++++++=+..+ +..++
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp------------------------------------------pGKPe 131 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHP------------------------------------------PGKPE 131 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCC------------------------------------------CCCcc
Confidence 999999999999887765569999998754211 01111
Q ss_pred cccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-C
Q 005554 579 RADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-D 657 (691)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~ 657 (691)
.. -...+..+++|+||.+|+.|.+-..+.+... ...+..+++.+ +
T Consensus 132 ~~--------------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~ 177 (213)
T COG3571 132 QL--------------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLED 177 (213)
T ss_pred cc--------------------------------hhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEecc
Confidence 10 0124678899999999999999887644221 23367788888 8
Q ss_pred CCCCCCc----------cChHHHHHHHHHHHHhh
Q 005554 658 AGHCPHD----------EKPEEVNSIISEWIVTI 681 (691)
Q Consensus 658 ~GH~~~~----------e~pe~v~~~I~~fL~~~ 681 (691)
+.|.+-- ++-...++.|..|+...
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 8995432 22356677777887654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.7e-07 Score=92.44 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=84.2
Q ss_pred CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC-cCEEEEEeChhHH
Q 005554 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGY 506 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~-~~v~lvGhS~GG~ 506 (691)
|+|+++||.++....|..+...|... ..|+.++.||+|.- ....-+++++++...+-|..... .+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 68999999999999999999999987 99999999999852 22345788888877777766654 7899999999999
Q ss_pred HHHHHHHhC---ccccceEEEecCCCC
Q 005554 507 FVAIVACLW---PAVVKSVVLINSAGN 530 (691)
Q Consensus 507 ial~~A~~~---P~~V~~lVll~~~~~ 530 (691)
+|..+|.+- -+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999763 346999999998754
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-08 Score=96.97 Aligned_cols=239 Identities=15% Similarity=0.121 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCCCChHHHHH-H-HHHHhcCCCEEEEeCCCCCcCCCCCCc----CCCHHHH----------HHHHHHHHH
Q 005554 426 EGPAILLVHGFGAFLEHYRD-N-IYDIADGGNRVWAITLLGFGRSEKPNI----VYTELMW----------SELLRDFTV 489 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~-~-~~~L~~~G~~Vi~~D~~G~G~S~~~~~----~~s~~~~----------a~dl~~ll~ 489 (691)
.+|.+|.++|.|.+....+. + +..|.++|+..+.+..|-||.-.+... -.+..|+ +..+..+++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 47889999999886554443 3 778888899999999999997654321 1122222 234445556
Q ss_pred HhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHH
Q 005554 490 EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFV 569 (691)
Q Consensus 490 ~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (691)
..|..++.+.|.||||.+|...|+.+|..|..+-++++...... +. .........+. .+...+.........
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v-Ft-----~Gvls~~i~W~--~L~~q~~~~~~~~~~ 242 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV-FT-----EGVLSNSINWD--ALEKQFEDTVYEEEI 242 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc-hh-----hhhhhcCCCHH--HHHHHhcccchhhhh
Confidence 66889999999999999999999999987777767666422110 00 00000000000 000000000000000
Q ss_pred HhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhh-cCCCCcEEEEEeCCCCCCChhHHHHHHHHhC
Q 005554 570 KQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLL-EGFKEKVLIIQGIKDPISDSKSKVAMFKEHC 648 (691)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~ 648 (691)
. ......... .....................+... .++.+.. ..-.-.+.+|.+++|.++|.... ..+++..
T Consensus 243 ~-~~~~~~~~~---~~~~~~~~~~~~Ea~~~m~~~md~~--T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v-~~Lq~~W 315 (348)
T PF09752_consen 243 S-DIPAQNKSL---PLDSMEERRRDREALRFMRGVMDSF--THLTNFPVPVDPSAIIFVAAKNDAYVPRHGV-LSLQEIW 315 (348)
T ss_pred c-ccccCcccc---cchhhccccchHHHHHHHHHHHHhh--ccccccCCCCCCCcEEEEEecCceEechhhc-chHHHhC
Confidence 0 000000000 0000000000011111111111111 0111111 11223589999999999998744 4788999
Q ss_pred CCcEEEEeCCCCC-CCccChHHHHHHHHHHHH
Q 005554 649 AGIVIRELDAGHC-PHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 649 ~~~~~~~~~~GH~-~~~e~pe~v~~~I~~fL~ 679 (691)
|++++.++++||. .++-+.+.|.++|.+-++
T Consensus 316 PGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 316 PGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 9999999988994 445567889999887665
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.8e-08 Score=95.79 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhc--------CCCEEEEeCCCCCcCCCCCCcCCCHHHHH----HHHHHHHHHh--
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIAD--------GGNRVWAITLLGFGRSEKPNIVYTELMWS----ELLRDFTVEV-- 491 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~--------~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a----~dl~~ll~~l-- 491 (691)
.+.+||||||.+++...++.+...+.+ ..++++++|+......-. ...+.+.+ +.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhhh
Confidence 478999999999998888887766622 247899999876432211 22333333 3444444444
Q ss_pred ---CCcCEEEEEeChhHHHHHHHHHhCc---cccceEEEecCCCC
Q 005554 492 ---VGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAGN 530 (691)
Q Consensus 492 ---~~~~v~lvGhS~GG~ial~~A~~~P---~~V~~lVll~~~~~ 530 (691)
+.+++++|||||||.++..++...+ +.|+.+|.++++..
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4478999999999999988876543 47999999998744
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.4e-07 Score=86.54 Aligned_cols=246 Identities=15% Similarity=0.138 Sum_probs=140.4
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcC-C--CEEEEeCCCCCcCCC---C------CCcCCCHHHHHHHHHHHHHHhCC
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-G--NRVWAITLLGFGRSE---K------PNIVYTELMWSELLRDFTVEVVG 493 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~-G--~~Vi~~D~~G~G~S~---~------~~~~~s~~~~a~dl~~ll~~l~~ 493 (691)
+++.+++|+|.+|....|.+++..|... + +.++.+-..||-.-+ . ..+-++++++++.-.++++..-.
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 4778999999999999999999887653 1 558998888886533 1 12467899999999999987644
Q ss_pred --cCEEEEEeChhHHHHHHHHHhCc--cccceEEEecCCCCCCCch-hhhhhhhhhh-cCChhhhhhHHHHHHHHhhHHH
Q 005554 494 --EPVHLIGNSIGGYFVAIVACLWP--AVVKSVVLINSAGNVIPEY-SFLQFSNERQ-ASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 494 --~~v~lvGhS~GG~ial~~A~~~P--~~V~~lVll~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
.+++++|||.|+++.+.+..... -.|.+++++-|..-...+. .......... ......+...+...+.+...+.
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~ 187 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRF 187 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHHH
Confidence 67999999999999999886432 2588888887752111000 0000000000 0000000000111111222222
Q ss_pred HHHhhcCCCCccccHHHHHHHH--------HhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhH
Q 005554 568 FVKQCYPTRRERADDWLISEML--------RASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639 (691)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~ 639 (691)
++-....... ....++....+ +.....+..++ ..... ...+.+++-.+-+.+.+|..|.+||.+
T Consensus 188 ~Li~~~l~~~-n~p~e~l~tal~l~h~~v~rn~v~la~qEm-~eV~~-----~d~e~~een~d~l~Fyygt~DgW~p~~- 259 (301)
T KOG3975|consen 188 ILIKFMLCGS-NGPQEFLSTALFLTHPQVVRNSVGLAAQEM-EEVTT-----RDIEYCEENLDSLWFYYGTNDGWVPSH- 259 (301)
T ss_pred HHHHHhcccC-CCcHHHHhhHHHhhcHHHHHHHhhhchHHH-HHHHH-----hHHHHHHhcCcEEEEEccCCCCCcchH-
Confidence 2222111111 11111111110 00000000000 00000 112234455678899999999999987
Q ss_pred HHHHHHHhCCCcEEEEe--CCCCCCCccChHHHHHHHHHHHH
Q 005554 640 KVAMFKEHCAGIVIREL--DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 640 ~~~~~~~~~~~~~~~~~--~~GH~~~~e~pe~v~~~I~~fL~ 679 (691)
....+++..|...+.+- ++-|.......+.++..+.+.++
T Consensus 260 ~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 260 YYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred HHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhhC
Confidence 56777777776666554 79999999999999998887653
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.75 E-value=1e-07 Score=93.11 Aligned_cols=164 Identities=21% Similarity=0.215 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHH----HhcCCCEEEEeCCC-----CCcCCC------------CCC-----------c
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYD----IADGGNRVWAITLL-----GFGRSE------------KPN-----------I 473 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~----L~~~G~~Vi~~D~~-----G~G~S~------------~~~-----------~ 473 (691)
.++-||++||++.+...++..... |.+.++.++.+|-| +-|... .+. .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 367899999999999999865544 44426899888843 222111 000 0
Q ss_pred CCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhCc--------cccceEEEecCCCCCCCchhhhhhhhhhh
Q 005554 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP--------AVVKSVVLINSAGNVIPEYSFLQFSNERQ 545 (691)
Q Consensus 474 ~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P--------~~V~~lVll~~~~~~~~~~~~~~~~~~~~ 545 (691)
...+++..+.|.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++.....+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------------
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----------
Confidence 22355566666666666542 2469999999999998886421 247888998875221000
Q ss_pred cCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEE
Q 005554 546 ASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVL 625 (691)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 625 (691)
+. ..+ ....|++|+|
T Consensus 151 ---------------------------~~----------------------------~~~----------~~~~i~iPtl 165 (212)
T PF03959_consen 151 ---------------------------YQ----------------------------ELY----------DEPKISIPTL 165 (212)
T ss_dssp ---------------------------GT----------------------------TTT------------TT---EEE
T ss_pred ---------------------------hh----------------------------hhh----------ccccCCCCeE
Confidence 00 000 1346799999
Q ss_pred EEEeCCCCCCChhHHHHHHHHhCCC-cEEEEeCCCCCCCccCh
Q 005554 626 IIQGIKDPISDSKSKVAMFKEHCAG-IVIRELDAGHCPHDEKP 667 (691)
Q Consensus 626 iI~G~~D~~vp~~~~~~~~~~~~~~-~~~~~~~~GH~~~~e~p 667 (691)
-|+|.+|.+++++.. +.+.+.+.+ .+++..++||.+.....
T Consensus 166 Hv~G~~D~~~~~~~s-~~L~~~~~~~~~v~~h~gGH~vP~~~~ 207 (212)
T PF03959_consen 166 HVIGENDPVVPPERS-EALAEMFDPDARVIEHDGGHHVPRKKE 207 (212)
T ss_dssp EEEETT-SSS-HHHH-HHHHHHHHHHEEEEEESSSSS----HH
T ss_pred EEEeCCCCCcchHHH-HHHHHhccCCcEEEEECCCCcCcCChh
Confidence 999999999998744 444555544 56666699998876643
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.2e-07 Score=92.86 Aligned_cols=98 Identities=20% Similarity=0.110 Sum_probs=64.0
Q ss_pred EEEEcCCCC---ChHHHHHHHHHHhc-CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH-----hCCcCEEEEE
Q 005554 430 ILLVHGFGA---FLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE-----VVGEPVHLIG 500 (691)
Q Consensus 430 VlliHG~~~---~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~-----l~~~~v~lvG 500 (691)
||++||.+- +......++..+++ .|+.|+.+|+|=.... ..+-.++|..+.+..++++ .+.++++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~---~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA---PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS---STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc---cccccccccccceeeeccccccccccccceEEee
Confidence 799999753 34444566666664 7999999999843221 1122345555555555555 3347899999
Q ss_pred eChhHHHHHHHHHhCcc----ccceEEEecCCCC
Q 005554 501 NSIGGYFVAIVACLWPA----VVKSVVLINSAGN 530 (691)
Q Consensus 501 hS~GG~ial~~A~~~P~----~V~~lVll~~~~~ 530 (691)
+|.||.+++.++....+ .++++++++|...
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 99999999999976443 3899999999643
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.7e-06 Score=91.55 Aligned_cols=124 Identities=18% Similarity=0.147 Sum_probs=84.7
Q ss_pred EEEEEEc----CeEEEEEEeCC-----CCCeEEEEcCCCCChHHHHHHHH-----------HHhc------CCCEEEEeC
Q 005554 408 TRIWRWN----GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIY-----------DIAD------GGNRVWAIT 461 (691)
Q Consensus 408 ~~~~~~~----g~~i~y~~~g~-----~~p~VlliHG~~~~~~~~~~~~~-----------~L~~------~G~~Vi~~D 461 (691)
.-++.++ +..++|.-... +.|.||+++|.++++..+--+.+ .+.. +-.+++.+|
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iD 128 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVD 128 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEe
Confidence 3456664 45677765542 26899999999888765522211 1111 126799999
Q ss_pred CC-CCcCCCCCC--cCCCHHHHHHHHHHHHHHh-------CCcCEEEEEeChhHHHHHHHHHhC----------ccccce
Q 005554 462 LL-GFGRSEKPN--IVYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACLW----------PAVVKS 521 (691)
Q Consensus 462 ~~-G~G~S~~~~--~~~s~~~~a~dl~~ll~~l-------~~~~v~lvGhS~GG~ial~~A~~~----------P~~V~~ 521 (691)
.| |+|.|.... ...+.++.++|+.++++.+ +..+++|+|||+||.++..+|.+. +-.+++
T Consensus 129 qP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkG 208 (462)
T PTZ00472 129 QPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAG 208 (462)
T ss_pred CCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEE
Confidence 75 888886533 2345678888988888743 347899999999999998888652 124789
Q ss_pred EEEecCCCCC
Q 005554 522 VVLINSAGNV 531 (691)
Q Consensus 522 lVll~~~~~~ 531 (691)
+++-++...+
T Consensus 209 i~IGNg~~dp 218 (462)
T PTZ00472 209 LAVGNGLTDP 218 (462)
T ss_pred EEEeccccCh
Confidence 9998886543
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.69 E-value=8e-07 Score=88.07 Aligned_cols=105 Identities=17% Similarity=0.227 Sum_probs=69.6
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHh-cCCC--EE--EEeCCCCC----cCC----CCCC------cC--CCHHHHHHHHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIA-DGGN--RV--WAITLLGF----GRS----EKPN------IV--YTELMWSELLR 485 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~-~~G~--~V--i~~D~~G~----G~S----~~~~------~~--~s~~~~a~dl~ 485 (691)
..|.|||||++++...+..++..+. +.|. .+ +.++.-|. |.= ..|- .. -+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 5689999999999999999999997 6653 23 33333333 211 1110 12 35677788888
Q ss_pred HHHHHh----CCcCEEEEEeChhHHHHHHHHHhCcc-----ccceEEEecCCCCC
Q 005554 486 DFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAGNV 531 (691)
Q Consensus 486 ~ll~~l----~~~~v~lvGhS~GG~ial~~A~~~P~-----~V~~lVll~~~~~~ 531 (691)
.++..| +.+++.+|||||||..++.++..+-. .+.++|.++++...
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 877665 56899999999999999999887532 58999999987554
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.2e-07 Score=84.35 Aligned_cols=188 Identities=13% Similarity=0.076 Sum_probs=116.5
Q ss_pred EEEcCeEEEEEEeCCCCCeEEEEcCCCC-ChHHHHHHHHHHhcCCCEEEEeCCC-CCcCCCC-CC-------cCCCHHHH
Q 005554 411 WRWNGYQIQYTVAGKEGPAILLVHGFGA-FLEHYRDNIYDIADGGNRVWAITLL-GFGRSEK-PN-------IVYTELMW 480 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~~~p~VlliHG~~~-~~~~~~~~~~~L~~~G~~Vi~~D~~-G~G~S~~-~~-------~~~s~~~~ 480 (691)
.++.|.+-+..-...++..||++--+.+ ....-+..+..++..||.|+.+|+. |--.|.. .. ...+..-.
T Consensus 23 ~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~ 102 (242)
T KOG3043|consen 23 EEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKI 102 (242)
T ss_pred EeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccc
Confidence 3445544433333323446666666544 4444678889999999999999964 3111211 00 12222223
Q ss_pred HHHHHHHHHH---hC-CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHH
Q 005554 481 SELLRDFTVE---VV-GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (691)
Q Consensus 481 a~dl~~ll~~---l~-~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (691)
-.++..+++. .+ .+++-++|.+|||.++..+....| .+.+++.+-|...
T Consensus 103 ~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------------------------- 155 (242)
T KOG3043|consen 103 WKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------------------------- 155 (242)
T ss_pred hhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC--------------------------
Confidence 3444444443 34 477999999999999999888887 5777777765310
Q ss_pred HHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCC
Q 005554 557 LLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISD 636 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp 636 (691)
+ ...+..+++|||++.|+.|..+|
T Consensus 156 -------------------------------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p 179 (242)
T KOG3043|consen 156 -------------------------------------------------------D-SADIANVKAPILFLFAELDEDVP 179 (242)
T ss_pred -------------------------------------------------------C-hhHHhcCCCCEEEEeecccccCC
Confidence 0 01345778999999999999999
Q ss_pred hhHHHHHHHHhCC----CcEEEEe-CCCCCCCc-----cCh------HHHHHHHHHHHHhh
Q 005554 637 SKSKVAMFKEHCA----GIVIREL-DAGHCPHD-----EKP------EEVNSIISEWIVTI 681 (691)
Q Consensus 637 ~~~~~~~~~~~~~----~~~~~~~-~~GH~~~~-----e~p------e~v~~~I~~fL~~~ 681 (691)
++...++-+.... +.++.+. +.+|-.+. +.| |+..+.+.+|++..
T Consensus 180 ~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 180 PKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 9854443332222 2356777 78885552 334 56677778888764
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=82.95 Aligned_cols=103 Identities=18% Similarity=0.235 Sum_probs=71.3
Q ss_pred CCeEEEEcCCCCChHHHHHH--HHHHhc-CCCEEEEeCCCCCcCCCC---------CCcCCCHHHHHHHHHHHHHHhCC-
Q 005554 427 GPAILLVHGFGAFLEHYRDN--IYDIAD-GGNRVWAITLLGFGRSEK---------PNIVYTELMWSELLRDFTVEVVG- 493 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~--~~~L~~-~G~~Vi~~D~~G~G~S~~---------~~~~~s~~~~a~dl~~ll~~l~~- 493 (691)
.|.||++||.+.+...+... +..|++ +||-|+.++......... ....-....++..+..+..+..+
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 57999999999998876542 334554 489999888542111100 01111233344555555556555
Q ss_pred -cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 494 -EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 494 -~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
.+|++.|+|.||+++..++..||+.+.++..+++..
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 579999999999999999999999999998888753
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.3e-07 Score=84.00 Aligned_cols=95 Identities=23% Similarity=0.224 Sum_probs=75.9
Q ss_pred eEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH----hCCcCEEEEEeChh
Q 005554 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE----VVGEPVHLIGNSIG 504 (691)
Q Consensus 429 ~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~----l~~~~v~lvGhS~G 504 (691)
.+||+-|=|+....=..+++.|+++|+.|+.+|-+-|=.+.+ +.++.+.|+..++++ .+.++++|||+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 578888877776665678999999999999999776665543 556667777777654 46689999999999
Q ss_pred HHHHHHHHHhCcc----ccceEEEecCC
Q 005554 505 GYFVAIVACLWPA----VVKSVVLINSA 528 (691)
Q Consensus 505 G~ial~~A~~~P~----~V~~lVll~~~ 528 (691)
+-+.-....+-|. +|+.++|+++.
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9888888777664 79999999986
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.6e-07 Score=98.89 Aligned_cols=96 Identities=23% Similarity=0.220 Sum_probs=74.6
Q ss_pred CCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc--CCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHh
Q 005554 437 GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 437 ~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~--~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~ 514 (691)
......|..+++.|.+.||.+ ..|++|+|.+.+... ...++++.+.+.++.+..+.++++|+||||||.+++.++..
T Consensus 104 ~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 104 LDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred cchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 345688999999999999765 889999999876532 22344555555666666777899999999999999999998
Q ss_pred Ccc----ccceEEEecCCCCCCC
Q 005554 515 WPA----VVKSVVLINSAGNVIP 533 (691)
Q Consensus 515 ~P~----~V~~lVll~~~~~~~~ 533 (691)
+|+ .|+++|+++++....+
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 886 4799999988754433
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.6e-06 Score=76.95 Aligned_cols=172 Identities=15% Similarity=0.172 Sum_probs=107.9
Q ss_pred CeEEEEcCCCCC-hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHH
Q 005554 428 PAILLVHGFGAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 428 p~VlliHG~~~~-~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
+.+|+|||+.++ ...|....+.=.. .+-.+++.. ...-..++|.+.+...+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~~-------w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQDD-------WEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccCC-------CCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 578999998766 4556554433111 122222211 12336888888888888777 46799999999999
Q ss_pred HHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHH
Q 005554 507 FVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLIS 586 (691)
Q Consensus 507 ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (691)
.++.++......|+|++|++|+.-..+. ....
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~-----------------------------~~~~------------------- 103 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPE-----------------------------IRPK------------------- 103 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccc-----------------------------cchh-------------------
Confidence 9999998877789999999986211000 0000
Q ss_pred HHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEeCCCCCCCcc-
Q 005554 587 EMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDE- 665 (691)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~GH~~~~e- 665 (691)
..+.+.. . ...+...|.+++...+|++++.+. .+.+++......+.+-++||+.-..
T Consensus 104 ----------------~~~tf~~-~----p~~~lpfps~vvaSrnDp~~~~~~-a~~~a~~wgs~lv~~g~~GHiN~~sG 161 (181)
T COG3545 104 ----------------HLMTFDP-I----PREPLPFPSVVVASRNDPYVSYEH-AEDLANAWGSALVDVGEGGHINAESG 161 (181)
T ss_pred ----------------hccccCC-C----ccccCCCceeEEEecCCCCCCHHH-HHHHHHhccHhheecccccccchhhc
Confidence 0000000 0 123456799999999999999985 4555555555444444899965433
Q ss_pred --ChHHHHHHHHHHHHh
Q 005554 666 --KPEEVNSIISEWIVT 680 (691)
Q Consensus 666 --~pe~v~~~I~~fL~~ 680 (691)
.-.+....+.+|+.+
T Consensus 162 ~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 162 FGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCcHHHHHHHHHHhhh
Confidence 334555666666654
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=82.47 Aligned_cols=198 Identities=9% Similarity=0.053 Sum_probs=115.1
Q ss_pred EEEeCC--CCCeEEEEcCC---CCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhCC
Q 005554 420 YTVAGK--EGPAILLVHGF---GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG 493 (691)
Q Consensus 420 y~~~g~--~~p~VlliHG~---~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~~ 493 (691)
...+|+ ..+.+|||||. -++...-..++..+.+.||+|..+ |++.+.... -.-++.+...-+.-+++...-
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q~htL~qt~~~~~~gv~filk~~~n 134 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQVHTLEQTMTQFTHGVNFILKYTEN 134 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCcccccHHHHHHHHHHHHHHHHHhccc
Confidence 344553 37899999995 233333334566666789999998 556654432 122444555555555555544
Q ss_pred -cCEEEEEeChhHHHHHHHHHh-CccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh
Q 005554 494 -EPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 494 -~~v~lvGhS~GG~ial~~A~~-~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
+.+.+-|||.|+.+|+.+..+ +..+|.+++++++.... ..+...
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l----------------------------------~EL~~t 180 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL----------------------------------RELSNT 180 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH----------------------------------HHHhCC
Confidence 456677999999999987765 34489999998875221 000000
Q ss_pred hcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCc
Q 005554 572 CYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651 (691)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~ 651 (691)
-+... -.+..... .........+..++.|+|++.|.+|.-.-.+ +.+.+......+
T Consensus 181 e~g~d-lgLt~~~a----------------------e~~Scdl~~~~~v~~~ilVv~~~~espklie-Qnrdf~~q~~~a 236 (270)
T KOG4627|consen 181 ESGND-LGLTERNA----------------------ESVSCDLWEYTDVTVWILVVAAEHESPKLIE-QNRDFADQLRKA 236 (270)
T ss_pred ccccc-cCcccchh----------------------hhcCccHHHhcCceeeeeEeeecccCcHHHH-hhhhHHHHhhhc
Confidence 00000 00000000 0001112346788999999999999754445 445566666667
Q ss_pred EEEEe-CCCCCCCccCh----HHHHHHHHHHH
Q 005554 652 VIREL-DAGHCPHDEKP----EEVNSIISEWI 678 (691)
Q Consensus 652 ~~~~~-~~GH~~~~e~p----e~v~~~I~~fL 678 (691)
.+... +.+|+-.++.. ..+...+.+|+
T Consensus 237 ~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 237 SFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred ceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 77777 88998777653 34444444443
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-07 Score=99.43 Aligned_cols=102 Identities=17% Similarity=0.112 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCC------CC-----C-------C------cCC------
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRS------EK-----P-------N------IVY------ 475 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S------~~-----~-------~------~~~------ 475 (691)
.-|.|||-||++++...|..++..|+.+||-|+++|.|..-.+ +. . . ...
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 3589999999999999999999999999999999999853111 00 0 0 000
Q ss_pred C-----HHHHHHHHHHHHHHh--------------------------CCcCEEEEEeChhHHHHHHHHHhCccccceEEE
Q 005554 476 T-----ELMWSELLRDFTVEV--------------------------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524 (691)
Q Consensus 476 s-----~~~~a~dl~~ll~~l--------------------------~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVl 524 (691)
. ++.-+.++..+++.+ +..++.++|||+||..++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 0 001122333333221 125699999999999999988876 57999999
Q ss_pred ecCC
Q 005554 525 INSA 528 (691)
Q Consensus 525 l~~~ 528 (691)
+++.
T Consensus 258 LD~W 261 (379)
T PF03403_consen 258 LDPW 261 (379)
T ss_dssp ES--
T ss_pred eCCc
Confidence 9985
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1e-05 Score=83.28 Aligned_cols=102 Identities=19% Similarity=0.044 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCC-----ChHHHHHHHHHHhc-CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH------hCCc
Q 005554 427 GPAILLVHGFGA-----FLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE------VVGE 494 (691)
Q Consensus 427 ~p~VlliHG~~~-----~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~------l~~~ 494 (691)
.|.||++||+|. ....|..+...++. .+.-|+.+|+|=--+.. -+..++|..+.+..+.++ .+.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~~~~~D~~ 166 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWLKLGADPS 166 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHHHhCCCcc
Confidence 578999999753 35678888888754 47889999988433222 234566666666666653 2447
Q ss_pred CEEEEEeChhHHHHHHHHHhC------ccccceEEEecCCCCC
Q 005554 495 PVHLIGNSIGGYFVAIVACLW------PAVVKSVVLINSAGNV 531 (691)
Q Consensus 495 ~v~lvGhS~GG~ial~~A~~~------P~~V~~lVll~~~~~~ 531 (691)
+++|+|-|.||.+|..+|.+. +.++++.|++.|....
T Consensus 167 rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 167 RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 899999999999999888652 3579999999997543
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.3e-07 Score=86.91 Aligned_cols=51 Identities=24% Similarity=0.314 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhC---CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCC
Q 005554 481 SELLRDFTVEVV---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 481 a~dl~~ll~~l~---~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~ 532 (691)
.+...+++.... .++|.|+|.|.||-+|+.+|..+| .|+++|.++|.....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEe
Confidence 344444554432 268999999999999999999999 699999999975443
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=2e-05 Score=72.92 Aligned_cols=85 Identities=19% Similarity=0.220 Sum_probs=52.4
Q ss_pred EEEEcCCCCChHH--HHH-HHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhC----CcCEEEEEeC
Q 005554 430 ILLVHGFGAFLEH--YRD-NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV----GEPVHLIGNS 502 (691)
Q Consensus 430 VlliHG~~~~~~~--~~~-~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~----~~~v~lvGhS 502 (691)
||++|||.++... .+. ....+ .-+++++ +++ ..+..+..+.+.+.+..+. .+++.|||+|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7899999888766 422 11122 1123433 221 1233333444555544311 2579999999
Q ss_pred hhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 503 IGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 503 ~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
+||+.|..+|.++. + ..|++||+..
T Consensus 69 LGGyyA~~La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 69 LGGYWAERIGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred hHHHHHHHHHHHHC--C-CEEEECCCCC
Confidence 99999999999986 3 5788899754
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.3e-07 Score=89.55 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=54.9
Q ss_pred CeEEEEcCCCC-ChHHHHHHHHHHhcCCCE---EEEeCCCCCcCCCCCCcCC----CHHHHHHHHHHHHHHhCCcCEEEE
Q 005554 428 PAILLVHGFGA-FLEHYRDNIYDIADGGNR---VWAITLLGFGRSEKPNIVY----TELMWSELLRDFTVEVVGEPVHLI 499 (691)
Q Consensus 428 p~VlliHG~~~-~~~~~~~~~~~L~~~G~~---Vi~~D~~G~G~S~~~~~~~----s~~~~a~dl~~ll~~l~~~~v~lv 499 (691)
.||||+||.++ ....|..+.+.|.++||. |+++++-....+....... +..++.+.|..+++.-+. ++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 58999999988 568899999999999999 8999884333211111111 123555666666677788 99999
Q ss_pred EeChhHHHHHHHHHhC
Q 005554 500 GNSIGGYFVAIVACLW 515 (691)
Q Consensus 500 GhS~GG~ial~~A~~~ 515 (691)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887543
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.7e-06 Score=77.59 Aligned_cols=174 Identities=19% Similarity=0.168 Sum_probs=108.8
Q ss_pred CCCeEEEEcCCCCChHHHHH----HHHHHhcCCCEEEEeCCCC----CcCCC---------CCC----------------
Q 005554 426 EGPAILLVHGFGAFLEHYRD----NIYDIADGGNRVWAITLLG----FGRSE---------KPN---------------- 472 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~----~~~~L~~~G~~Vi~~D~~G----~G~S~---------~~~---------------- 472 (691)
.++-|||+||+-.+...|.. +-+.|.+. +..+.+|-|- -+.++ .+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 36789999999888777653 33444444 6777777552 01111 010
Q ss_pred -cCCCHHHHHHHHHHHHHHhCCcCE-EEEEeChhHHHHHHHHHh---------CccccceEEEecCCCCCCCchhhhhhh
Q 005554 473 -IVYTELMWSELLRDFTVEVVGEPV-HLIGNSIGGYFVAIVACL---------WPAVVKSVVLINSAGNVIPEYSFLQFS 541 (691)
Q Consensus 473 -~~~s~~~~a~dl~~ll~~l~~~~v-~lvGhS~GG~ial~~A~~---------~P~~V~~lVll~~~~~~~~~~~~~~~~ 541 (691)
.....+.-.+.|.+.+...| |+ -|+|.|.|+.++..++.. .| .++-+|++++.....
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~--------- 150 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPS--------- 150 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCc---------
Confidence 01123344555555555554 44 589999999999998872 12 267777777642100
Q ss_pred hhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCC
Q 005554 542 NERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFK 621 (691)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 621 (691)
... +.......++
T Consensus 151 ------------------------------------~~~-------------------------------~~~~~~~~i~ 163 (230)
T KOG2551|consen 151 ------------------------------------KKL-------------------------------DESAYKRPLS 163 (230)
T ss_pred ------------------------------------chh-------------------------------hhhhhccCCC
Confidence 000 0001235789
Q ss_pred CcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEeCCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 622 EKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 622 ~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
+|.|-|.|+.|.+++.+. ...+.+.+++..+....+||++...+ ...+.|.+||+...
T Consensus 164 ~PSLHi~G~~D~iv~~~~-s~~L~~~~~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 164 TPSLHIFGETDTIVPSER-SEQLAESFKDATVLEHPGGHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred CCeeEEecccceeecchH-HHHHHHhcCCCeEEecCCCccCCCch--HHHHHHHHHHHHHH
Confidence 999999999999999984 45566777777555559999888766 45566666665544
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.40 E-value=5e-06 Score=80.84 Aligned_cols=94 Identities=22% Similarity=0.230 Sum_probs=71.5
Q ss_pred EEcCCC--CChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHH-HhCCcCEEEEEeChhHHHH
Q 005554 432 LVHGFG--AFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV-EVVGEPVHLIGNSIGGYFV 508 (691)
Q Consensus 432 liHG~~--~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~-~l~~~~v~lvGhS~GG~ia 508 (691)
++|+.+ ++...|..+...|.. ++.|+++|.+|+|.+... ..+++.+++.+...+. .....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 455543 677889999999987 499999999999876543 3466777766555443 3445789999999999999
Q ss_pred HHHHHh---CccccceEEEecCC
Q 005554 509 AIVACL---WPAVVKSVVLINSA 528 (691)
Q Consensus 509 l~~A~~---~P~~V~~lVll~~~ 528 (691)
..++.+ .++.+.+++++++.
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccC
Confidence 998886 34568999998874
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-05 Score=92.30 Aligned_cols=226 Identities=13% Similarity=0.043 Sum_probs=142.9
Q ss_pred CCCCceEEEEEEEcCeEEEEEEeCCC-------CCeEEEEcCCCCCh-------HHHHHHHHHHhcCCCEEEEeCCCCCc
Q 005554 401 SNEGVYSTRIWRWNGYQIQYTVAGKE-------GPAILLVHGFGAFL-------EHYRDNIYDIADGGNRVWAITLLGFG 466 (691)
Q Consensus 401 ~~~~~~~~~~~~~~g~~i~y~~~g~~-------~p~VlliHG~~~~~-------~~~~~~~~~L~~~G~~Vi~~D~~G~G 466 (691)
...+......+..+|...++...-++ =|.|+.+||.+++. -.|..+ .+...|+.|+.+|.||-|
T Consensus 493 ~~~p~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 493 VALPIVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred ccCCcceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC
Confidence 34455666677779999988766542 36788999988632 123222 455679999999999988
Q ss_pred CCCCC--------CcCCCHHHHHHHHHHHHHHhCC--cCEEEEEeChhHHHHHHHHHhCccc-cceEEEecCCCCCCCch
Q 005554 467 RSEKP--------NIVYTELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAV-VKSVVLINSAGNVIPEY 535 (691)
Q Consensus 467 ~S~~~--------~~~~s~~~~a~dl~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~-V~~lVll~~~~~~~~~~ 535 (691)
..... -+...++|+...+..+++..-+ +++.++|+|.||.+++.++...|+. +++.+.++|..+.. .+
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~y 649 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YY 649 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-ee
Confidence 76532 1345777777777777766543 6799999999999999999999854 55559999874421 00
Q ss_pred hhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHh
Q 005554 536 SFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNY 615 (691)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (691)
... ...+ +....... ... + .. .....
T Consensus 650 ds~-------------------------~ter----ymg~p~~~-~~~----y-------------~e-------~~~~~ 675 (755)
T KOG2100|consen 650 DST-------------------------YTER----YMGLPSEN-DKG----Y-------------EE-------SSVSS 675 (755)
T ss_pred ccc-------------------------ccHh----hcCCCccc-cch----h-------------hh-------ccccc
Confidence 000 0000 00000000 000 0 00 00111
Q ss_pred hhcCCCCcE-EEEEeCCCCCCChhHHHHHHHHhC---CCcEEEEe-CCCCCCCccC-hHHHHHHHHHHHHhhhC
Q 005554 616 LLEGFKEKV-LIIQGIKDPISDSKSKVAMFKEHC---AGIVIREL-DAGHCPHDEK-PEEVNSIISEWIVTIES 683 (691)
Q Consensus 616 ~l~~i~~Pv-LiI~G~~D~~vp~~~~~~~~~~~~---~~~~~~~~-~~GH~~~~e~-pe~v~~~I~~fL~~~~~ 683 (691)
.+..++.|. |+|||+.|.-++.+...++++.+. -...+.+. +.+|.+..-. -..+...+..|+.....
T Consensus 676 ~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 676 PANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred hhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 244556665 999999999999886666554442 22555555 8999877754 36788888899985543
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.3e-05 Score=79.34 Aligned_cols=101 Identities=26% Similarity=0.226 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCCChHHH------------------HHHHHHHhcCCCEEEEeCCCCCcCCCCCC-----cCCCHHHHHH-
Q 005554 427 GPAILLVHGFGAFLEHY------------------RDNIYDIADGGNRVWAITLLGFGRSEKPN-----IVYTELMWSE- 482 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~------------------~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-----~~~s~~~~a~- 482 (691)
-|+||++||-++..+.. ..+...|+++||-|+++|.+|+|+..... ..++...++.
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 46899999987654331 13567899999999999999999875432 1222222222
Q ss_pred --------------HHHHHHHHhC------CcCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 483 --------------LLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 483 --------------dl~~ll~~l~------~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
|....++.+. .++|.++|+||||..++.+|+..+ +|++.|..+..
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhhh
Confidence 1122233332 267999999999999999999865 79888877653
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.4e-05 Score=80.37 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=58.9
Q ss_pred HHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhC-----CcCEEEEEeChhHHHHHHHHHhCccccc
Q 005554 446 NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVK 520 (691)
Q Consensus 446 ~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~-----~~~v~lvGhS~GG~ial~~A~~~P~~V~ 520 (691)
+-..|.. |+.||.+.+. ..|...-++++.......+++.+. ..+++|||.|.||..++.+|+.+|+.+.
T Consensus 93 vG~AL~~-GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~g 166 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVG 166 (581)
T ss_pred HHHHHHc-CCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccC
Confidence 4445544 8998888653 234445688887777677766542 2489999999999999999999999888
Q ss_pred eEEEecCCCC
Q 005554 521 SVVLINSAGN 530 (691)
Q Consensus 521 ~lVll~~~~~ 530 (691)
-+|+.+++..
T Consensus 167 plvlaGaPls 176 (581)
T PF11339_consen 167 PLVLAGAPLS 176 (581)
T ss_pred ceeecCCCcc
Confidence 8888777643
|
Their function is unknown. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.2e-07 Score=94.10 Aligned_cols=106 Identities=20% Similarity=0.319 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCCCCh--HHH-HHHHHHHhc---CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH----hC--C
Q 005554 426 EGPAILLVHGFGAFL--EHY-RDNIYDIAD---GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE----VV--G 493 (691)
Q Consensus 426 ~~p~VlliHG~~~~~--~~~-~~~~~~L~~---~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~----l~--~ 493 (691)
.+|++|++|||.++. ..| ..+...+.+ .+++||++|+...-...............+.|..++.. .+ .
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 478999999998776 344 445665544 47999999995332110000011122333444444433 23 3
Q ss_pred cCEEEEEeChhHHHHHHHHHhCcc--ccceEEEecCCCCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPA--VVKSVVLINSAGNV 531 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~--~V~~lVll~~~~~~ 531 (691)
++++|||||+||.+|-.++..... +|.+|+.++|++..
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 789999999999999999988877 89999999998543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.1e-06 Score=83.48 Aligned_cols=123 Identities=24% Similarity=0.217 Sum_probs=82.3
Q ss_pred CCceEEEEEEEcCeEEEE---EEeC----CCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCC
Q 005554 403 EGVYSTRIWRWNGYQIQY---TVAG----KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY 475 (691)
Q Consensus 403 ~~~~~~~~~~~~g~~i~y---~~~g----~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~ 475 (691)
..+...+....+|.+|.. ...+ ++...|||+-|..+--+. .++..=++.||.|+.+++||++.|.+.+.+.
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~ 289 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV 289 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcc
Confidence 445555666677766543 2222 124567888886542111 1233333458999999999999998865444
Q ss_pred CHHHHHHHHHHH-HHHhCC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 476 TELMWSELLRDF-TVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 476 s~~~~a~dl~~l-l~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
.....++.+.++ ++.++. +.+++.|+|.||..++.+|..||+ |+++||-.+.
T Consensus 290 n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 433344444443 566665 679999999999999999999997 9999987664
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.1e-05 Score=79.81 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=70.6
Q ss_pred CCeEEEEcCCC---CChHHH-HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH---hC--CcCEE
Q 005554 427 GPAILLVHGFG---AFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE---VV--GEPVH 497 (691)
Q Consensus 427 ~p~VlliHG~~---~~~~~~-~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~---l~--~~~v~ 497 (691)
.|+||++||.+ ++.... ..+...+...|+.|+.+|+|-.-+-. .+..+++..+.+..+.++ ++ .+++.
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~ 155 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAAELGIDPSRIA 155 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhHhhCCCccceE
Confidence 68999999975 344444 34445555679999999998543332 233556655555555444 33 46799
Q ss_pred EEEeChhHHHHHHHHHhCcc----ccceEEEecCCCCC
Q 005554 498 LIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGNV 531 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~P~----~V~~lVll~~~~~~ 531 (691)
++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 156 v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 156 VAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred EEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 99999999999998876443 47889999987443
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.27 E-value=1e-05 Score=82.68 Aligned_cols=68 Identities=22% Similarity=0.241 Sum_probs=46.4
Q ss_pred CCCCcEEEEEeCCCCCCChhHHHHHHHHhC----CCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhhCCCCCCC
Q 005554 619 GFKEKVLIIQGIKDPISDSKSKVAMFKEHC----AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESKVPAES 689 (691)
Q Consensus 619 ~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~----~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~~~~~~s 689 (691)
..+.|+++.+|..|.++|.....+..++.+ .+++++.. ..+|....- .-......||+......+..+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~---~~~~~a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAF---ASAPDALAWLDDRFAGKPATS 289 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhh---cCcHHHHHHHHHHHCCCCCCC
Confidence 347899999999999999986666666554 34556655 688976432 122445578887776665543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.4e-07 Score=89.79 Aligned_cols=91 Identities=21% Similarity=0.177 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCC--cCCCCCCcC---CC---HHHHHHHHHHHHHH--------
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF--GRSEKPNIV---YT---ELMWSELLRDFTVE-------- 490 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~--G~S~~~~~~---~s---~~~~a~dl~~ll~~-------- 490 (691)
-|.|++-||.|.+...|..+++.|++.||-|.++|.+|- |........ +. +.+-..|+..+++.
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 589999999999999999999999999999999999994 433321111 22 11122233333221
Q ss_pred -----hCCcCEEEEEeChhHHHHHHHHHhCcc
Q 005554 491 -----VVGEPVHLIGNSIGGYFVAIVACLWPA 517 (691)
Q Consensus 491 -----l~~~~v~lvGhS~GG~ial~~A~~~P~ 517 (691)
+...+|.++|||+||..++..+.-..+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 223689999999999999998865543
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00018 Score=78.30 Aligned_cols=125 Identities=20% Similarity=0.178 Sum_probs=82.2
Q ss_pred EEEEEEEc---CeEEEEEEeCC-----CCCeEEEEcCCCCChHHHHHHHHH----Hh--------c------CCCEEEEe
Q 005554 407 STRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIYD----IA--------D------GGNRVWAI 460 (691)
Q Consensus 407 ~~~~~~~~---g~~i~y~~~g~-----~~p~VlliHG~~~~~~~~~~~~~~----L~--------~------~G~~Vi~~ 460 (691)
..-++.++ +..++|.-... ..|.||.+.|.++++..+-.+.+. +. . +-.+++.+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEE
Confidence 34566666 67888876543 278999999999888777433221 11 0 12689999
Q ss_pred CC-CCCcCCCCCCc---CCCHHHHHHHHHHHHHHh-------CCcCEEEEEeChhHHHHHHHHHh----C------cccc
Q 005554 461 TL-LGFGRSEKPNI---VYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACL----W------PAVV 519 (691)
Q Consensus 461 D~-~G~G~S~~~~~---~~s~~~~a~dl~~ll~~l-------~~~~v~lvGhS~GG~ial~~A~~----~------P~~V 519 (691)
|. .|.|.|..... ..+.++.++++..+|+.+ ...+++|.|-|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 94 59999976543 347888888888888654 33589999999999988777753 2 2358
Q ss_pred ceEEEecCCCCC
Q 005554 520 KSVVLINSAGNV 531 (691)
Q Consensus 520 ~~lVll~~~~~~ 531 (691)
+|+++.++...+
T Consensus 172 kGi~IGng~~dp 183 (415)
T PF00450_consen 172 KGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEESE-SBH
T ss_pred ccceecCccccc
Confidence 899999987543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.6e-05 Score=80.80 Aligned_cols=202 Identities=12% Similarity=0.079 Sum_probs=124.5
Q ss_pred CCeEEEEcCCCCC-----hHHHHH--HHHHHhcCCCEEEEeCCCCCcCCCCC--------CcCCCHHHHHHHHHHHHHHh
Q 005554 427 GPAILLVHGFGAF-----LEHYRD--NIYDIADGGNRVWAITLLGFGRSEKP--------NIVYTELMWSELLRDFTVEV 491 (691)
Q Consensus 427 ~p~VlliHG~~~~-----~~~~~~--~~~~L~~~G~~Vi~~D~~G~G~S~~~--------~~~~s~~~~a~dl~~ll~~l 491 (691)
-|+|+++-|.++- ...+.. -...|+..||-|+.+|-||.-.-... -+...++|+++-+.-+.+..
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4799999998763 222222 23567888999999999987543321 13557889999999888887
Q ss_pred CC---cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHH
Q 005554 492 VG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNF 568 (691)
Q Consensus 492 ~~---~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (691)
|. +++.+-|+|+||++++...+++|+-++..|.=+|.. .|..... ..
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT----~W~~YDT----------------------gY---- 771 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT----DWRLYDT----------------------GY---- 771 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce----eeeeecc----------------------cc----
Confidence 54 789999999999999999999999777666544431 1110000 00
Q ss_pred HHhhcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhC
Q 005554 569 VKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC 648 (691)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~ 648 (691)
-.+++. .+..... .+.. .+... ..+.+..-....|++||--|.-|.......++..+.
T Consensus 772 TERYMg-~P~~nE~---------gY~a------gSV~~------~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lv 829 (867)
T KOG2281|consen 772 TERYMG-YPDNNEH---------GYGA------GSVAG------HVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALV 829 (867)
T ss_pred hhhhcC-CCccchh---------cccc------hhHHH------HHhhCCCCCceEEEEecccccchhhhhHHHHHHHHH
Confidence 000100 0100000 0000 00000 111233334568999999999998876666655544
Q ss_pred ---CCcEEEEe-CCCCCCCcc-ChHHHHHHHHHHHHh
Q 005554 649 ---AGIVIREL-DAGHCPHDE-KPEEVNSIISEWIVT 680 (691)
Q Consensus 649 ---~~~~~~~~-~~GH~~~~e-~pe~v~~~I~~fL~~ 680 (691)
..-++.+. +--|.+-.- .-.-+-..+..|+++
T Consensus 830 kagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 830 KAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 44556666 888977654 356666778888875
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.7e-06 Score=80.00 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHh-cCCC--EEEEeCCCCCcCCCC-CCc----CCCHHHHHHHHHHHHHHhCCcCEE
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIA-DGGN--RVWAITLLGFGRSEK-PNI----VYTELMWSELLRDFTVEVVGEPVH 497 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~-~~G~--~Vi~~D~~G~G~S~~-~~~----~~s~~~~a~dl~~ll~~l~~~~v~ 497 (691)
++..+|||||+..+.+.-..-+..+. ..|+ .++.+.||+.|.-.. ... ..+-..+++.|..+.+..+.++++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 57799999999988655433222222 2223 799999998886321 111 122333333344444444568999
Q ss_pred EEEeChhHHHHHHHHHh----Cc-----cccceEEEecCC
Q 005554 498 LIGNSIGGYFVAIVACL----WP-----AVVKSVVLINSA 528 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~----~P-----~~V~~lVll~~~ 528 (691)
|++||||+.+.+.+... .+ .++..+|+++|-
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 99999999999987643 21 368899999875
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.5e-05 Score=78.04 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCC------C-Cc----------------C-C--CHHH
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK------P-NI----------------V-Y--TELM 479 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~------~-~~----------------~-~--s~~~ 479 (691)
+=|.|||-||+|++...|..+.-.|+.+||-|.+++.|-+-.+-. + .+ . + ..++
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 358999999999999999999999999999999999986643310 0 00 0 0 1111
Q ss_pred H---HHHHH---HHHHHh------------------------CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 480 W---SELLR---DFTVEV------------------------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 480 ~---a~dl~---~ll~~l------------------------~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
. ++.+. .+++.+ .-.++.++|||+||..++...+.+. .+++.|+++..
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 1 11111 112211 1146899999999999988887765 48888888875
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.5e-05 Score=70.67 Aligned_cols=101 Identities=12% Similarity=0.068 Sum_probs=70.6
Q ss_pred CeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCC--------C----------CCcCCCHHHHHHHHHHHHH
Q 005554 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE--------K----------PNIVYTELMWSELLRDFTV 489 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~--------~----------~~~~~s~~~~a~dl~~ll~ 489 (691)
.+||++||.+.+...|..+++.|.-.+...|++.-|-.-.+. . +...-.+...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 489999999999999988888877667778887543221110 0 0111233445556666665
Q ss_pred Hh---CC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 490 EV---VG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 490 ~l---~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
+. ++ .++.+-|.||||.+++..+..+|..+.+++-.++.
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 43 22 56889999999999999999998888888777653
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.5e-05 Score=74.24 Aligned_cols=103 Identities=19% Similarity=0.141 Sum_probs=72.3
Q ss_pred EEEEcCeEEEEEEeC----CCCCeEEEEcCCCCChHHH-------HHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHH
Q 005554 410 IWRWNGYQIQYTVAG----KEGPAILLVHGFGAFLEHY-------RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTEL 478 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g----~~~p~VlliHG~~~~~~~~-------~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~ 478 (691)
.+..|++.|--..-. .++..||++-|.++.-+.. ..+.+...+.|-+|+.+++||.|.|.++. +.+
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---s~~ 192 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---SRK 192 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---CHH
Confidence 344466666543332 2366999999988765541 11222233347899999999999998765 468
Q ss_pred HHHHHHHHHHHHhC-------CcCEEEEEeChhHHHHHHHHHhC
Q 005554 479 MWSELLRDFTVEVV-------GEPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 479 ~~a~dl~~ll~~l~-------~~~v~lvGhS~GG~ial~~A~~~ 515 (691)
+++.+-.+.++.+. .+++++.|||+||.++..++.++
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 88887777776663 26799999999999998866654
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00031 Score=70.26 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=67.1
Q ss_pred CCeEEEEcCCC--CChHHHHHHHHHHhcC-CCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC--cCEEEEEe
Q 005554 427 GPAILLVHGFG--AFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG--EPVHLIGN 501 (691)
Q Consensus 427 ~p~VlliHG~~--~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~--~~v~lvGh 501 (691)
..|||+.||+| ++...+..+.+.+.+. |+.+.++. .|-|.. ..--..+.++++.+.+-+..... +-+++||+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIGf 102 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELSEGYNIVAE 102 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhcCceEEEEE
Confidence 56999999999 5566777777777533 66555554 232211 11112444555555444433211 45999999
Q ss_pred ChhHHHHHHHHHhCcc--ccceEEEecCCCC
Q 005554 502 SIGGYFVAIVACLWPA--VVKSVVLINSAGN 530 (691)
Q Consensus 502 S~GG~ial~~A~~~P~--~V~~lVll~~~~~ 530 (691)
|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 103 SQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999877 4999999998643
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.5e-05 Score=83.22 Aligned_cols=102 Identities=24% Similarity=0.252 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCE---EEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeCh
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNR---VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI 503 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~---Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~ 503 (691)
.-+++++||++.+...|..+...+...|+. ++.+++++. +.........+++...+.+++...+.+++.++||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeecc
Confidence 459999999988888888888888877777 888888866 222223456677788888888888889999999999
Q ss_pred hHHHHHHHHHhCc--cccceEEEecCCCC
Q 005554 504 GGYFVAIVACLWP--AVVKSVVLINSAGN 530 (691)
Q Consensus 504 GG~ial~~A~~~P--~~V~~lVll~~~~~ 530 (691)
||.+...++...+ .+|+.++.++++-.
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999998888 78999999998733
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=6e-05 Score=74.02 Aligned_cols=125 Identities=21% Similarity=0.187 Sum_probs=88.9
Q ss_pred ceEEEEEEEcCeEEEEEEeCCC-----CCeEEEEcCCCCChHHHHHHH--HHHhc-CCCEEEEeCC-------CCCcCCC
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFLEHYRDNI--YDIAD-GGNRVWAITL-------LGFGRSE 469 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~-----~p~VlliHG~~~~~~~~~~~~--~~L~~-~G~~Vi~~D~-------~G~G~S~ 469 (691)
..+...+..+|.+..|..+-+. .|.||++||.+++...+.... +.|++ .||-|+.+|- .++|.+.
T Consensus 34 ~~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 34 GSSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred cCCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccC
Confidence 4445566777877777766432 568999999999887776654 55554 4899999962 1223332
Q ss_pred CCC----cCCCHHHHHHHHHHHHHHhCCc--CEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 470 KPN----IVYTELMWSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 470 ~~~----~~~s~~~~a~dl~~ll~~l~~~--~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
.+. .--....+.+.+..++.+.+++ +|++.|.|-||.++..+++.+|+.+.++-.+++..
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 222 1223445566666677777775 79999999999999999999999999998888753
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00033 Score=67.02 Aligned_cols=82 Identities=17% Similarity=0.137 Sum_probs=56.5
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCE-EEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNR-VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~-Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG 505 (691)
+..|||..|||.+...+.++.. ..++. ++++|++..-.. . + + .+.+.+.|||+|||-
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~~d------~-------~----~--~~y~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLDFD------F-------D----L--SGYREIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CCCccEEEEecCcccccc------c-------c----c--ccCceEEEEEEeHHH
Confidence 5689999999999887765531 22455 466788743211 0 1 1 134789999999999
Q ss_pred HHHHHHHHhCccccceEEEecCCCCCC
Q 005554 506 YFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 506 ~ial~~A~~~P~~V~~lVll~~~~~~~ 532 (691)
.+|..+....| ++..|.+++.+.+.
T Consensus 69 w~A~~~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 69 WAANRVLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred HHHHHHhccCC--cceeEEEECCCCCc
Confidence 99988765543 77888888876544
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.5e-05 Score=72.75 Aligned_cols=114 Identities=19% Similarity=0.182 Sum_probs=68.2
Q ss_pred cCeEEEEEEeCCC-------C-CeEEEEcCCCCChHHH-HHHHH-------HHhcCCCEEEEeCCC-CCcCCCCCCcCCC
Q 005554 414 NGYQIQYTVAGKE-------G-PAILLVHGFGAFLEHY-RDNIY-------DIADGGNRVWAITLL-GFGRSEKPNIVYT 476 (691)
Q Consensus 414 ~g~~i~y~~~g~~-------~-p~VlliHG~~~~~~~~-~~~~~-------~L~~~G~~Vi~~D~~-G~G~S~~~~~~~s 476 (691)
.|.+|-|.-+-++ - |.|||+||.|.....- ..+.. ..-+.++-|+++.+- =+..++... ...
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t-~~~ 248 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT-LLY 248 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc-chh
Confidence 4677888766542 2 7899999987654432 22211 111122334444311 111122111 112
Q ss_pred HHHHHHHHHHH-HHHhCC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 477 ELMWSELLRDF-TVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 477 ~~~~a~dl~~l-l~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
.....+.+.++ .++.++ .+++++|.|+||+-++.++.++|+.+++.+++++.
T Consensus 249 l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 249 LIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 23334444433 345555 57999999999999999999999999999999985
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.002 Score=64.27 Aligned_cols=219 Identities=16% Similarity=0.126 Sum_probs=112.7
Q ss_pred eEEEEcCCCCC-hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCc---CEEEEEeChh
Q 005554 429 AILLVHGFGAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGE---PVHLIGNSIG 504 (691)
Q Consensus 429 ~VlliHG~~~~-~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~---~v~lvGhS~G 504 (691)
|||++=||.+. .....+..+...+.|++++.+-.+-....... -.+...++.+.+.+...... ++++-..|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 46777787654 44444555555557999999865432221111 24445555566665554433 7889999998
Q ss_pred HHHHHHHHHh-----C-----ccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhh--hhHHHHHHHHhhHHHHHHhh
Q 005554 505 GYFVAIVACL-----W-----PAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRL--GAQLLLFYLRLNISNFVKQC 572 (691)
Q Consensus 505 G~ial~~A~~-----~-----P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 572 (691)
|...+..... . -.+++++|+-++++....................... ................. .
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 155 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYF--I 155 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHH--H
Confidence 8877765431 1 1248999988777544331111111100000000000 00000000000000000 0
Q ss_pred cCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhC---C
Q 005554 573 YPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC---A 649 (691)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~---~ 649 (691)
. ............... .......+|-|++++..|.+++.+...+..++.. -
T Consensus 156 ~-------------------~~~~~~~~~~~~~~~-------~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~ 209 (240)
T PF05705_consen 156 F-------------------GYPDVQEYYRRALND-------FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW 209 (240)
T ss_pred h-------------------cCCcHHHHHHHHHhh-------hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC
Confidence 0 000001111111100 0123456899999999999999987666554433 2
Q ss_pred CcEEEEe-CCCCCCCcc-ChHHHHHHHHHHH
Q 005554 650 GIVIREL-DAGHCPHDE-KPEEVNSIISEWI 678 (691)
Q Consensus 650 ~~~~~~~-~~GH~~~~e-~pe~v~~~I~~fL 678 (691)
.+..... ++.|..|+. +|++..+.+.+|+
T Consensus 210 ~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 210 DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3444444 899988886 4999999999884
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.6e-05 Score=75.33 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=49.8
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcC--CCEEEEeCCCCCcCCCCCCcCCCHHHHH----HHHHHHHHHhCC--cCEEE
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWS----ELLRDFTVEVVG--EPVHL 498 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~--G~~Vi~~D~~G~G~S~~~~~~~s~~~~a----~dl~~ll~~l~~--~~v~l 498 (691)
...|||+||+.++...|..+...+... .+.--.+...++..... ....+++..+ +.|.+.++.... .++++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 457999999999999998777776651 12111112222211111 1122344444 444444444343 47999
Q ss_pred EEeChhHHHHHHHHH
Q 005554 499 IGNSIGGYFVAIVAC 513 (691)
Q Consensus 499 vGhS~GG~ial~~A~ 513 (691)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999876554
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00067 Score=72.86 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCCC-hHHHHHHHHHHhcCC----CEEEEeCCCCC-cCCCC-CCcCCCHHHHHHHHHHHHHHh-C----Cc
Q 005554 427 GPAILLVHGFGAF-LEHYRDNIYDIADGG----NRVWAITLLGF-GRSEK-PNIVYTELMWSELLRDFTVEV-V----GE 494 (691)
Q Consensus 427 ~p~VlliHG~~~~-~~~~~~~~~~L~~~G----~~Vi~~D~~G~-G~S~~-~~~~~s~~~~a~dl~~ll~~l-~----~~ 494 (691)
-|.|+++||..-. .......+..|.+.| .-|+.+|-.+. .++.. +...--.+.++++|.-+++.. . .+
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~ 288 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDAD 288 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 5789999994311 111223455555555 34677775321 11111 111111333456666666553 2 25
Q ss_pred CEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 495 ~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
+.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 6899999999999999999999999999999985
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00042 Score=64.73 Aligned_cols=101 Identities=11% Similarity=-0.018 Sum_probs=75.9
Q ss_pred CCeEEEEcCCCCC---hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC----cCEEEE
Q 005554 427 GPAILLVHGFGAF---LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG----EPVHLI 499 (691)
Q Consensus 427 ~p~VlliHG~~~~---~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~----~~v~lv 499 (691)
+..||||-|++.. ...-..+...|.+.+|.++-+.++.+- ..-+..++.+-++|+..++++++. ..++|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 5679999998875 233456788888889999998765321 112345777788999999998865 479999
Q ss_pred EeChhHHHHHHHHHh--CccccceEEEecCCCC
Q 005554 500 GNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (691)
Q Consensus 500 GhS~GG~ial~~A~~--~P~~V~~lVll~~~~~ 530 (691)
|||.|+.-.+.|... .|..|.+.|+..|...
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999998888733 3567888888888754
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00032 Score=67.19 Aligned_cols=231 Identities=14% Similarity=0.113 Sum_probs=122.5
Q ss_pred CCeEEEEcCCCCChHHHH-HHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHH--------HHHHHH------Hh
Q 005554 427 GPAILLVHGFGAFLEHYR-DNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL--------LRDFTV------EV 491 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~-~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~d--------l~~ll~------~l 491 (691)
++.-|++-|.|.+...-+ .+...+.++|...+.+.-|-+|+...+..-.+.-+.+.| |.+... ..
T Consensus 113 ~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~ 192 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSAD 192 (371)
T ss_pred CCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccc
Confidence 455555656665543322 355667777889999999999987654321111111222 222222 33
Q ss_pred CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
|..++.++|-||||.+|......++.-|+-+=++++..... .+. .. .+... . .....+...
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asv-s~t-----eg----~l~~~-~--------s~~~~~~~~ 253 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASV-SAT-----EG----LLLQD-T--------SKMKRFNQT 253 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCccccccccccccch-hhh-----hh----hhhhh-h--------HHHHhhccC
Confidence 55899999999999999999998877666555555431110 000 00 00000 0 000000000
Q ss_pred -hcCCCCcccc-HHHHHHH--HHhcCCcchHHHHHHHhccccCcchHhhhcCCCC-----cEEEEEeCCCCCCChhHHHH
Q 005554 572 -CYPTRRERAD-DWLISEM--LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKE-----KVLIIQGIKDPISDSKSKVA 642 (691)
Q Consensus 572 -~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-----PvLiI~G~~D~~vp~~~~~~ 642 (691)
.+.....+.. +.+.... .....+......++..++... .+....+ -+.++.+++|..+|.. ...
T Consensus 254 t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T------~v~~fp~Pvdpsl~ivv~A~~D~Yipr~-gv~ 326 (371)
T KOG1551|consen 254 TNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDECT------HVANFPVPVDPSLIIVVQAKEDAYIPRT-GVR 326 (371)
T ss_pred cchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhhc------hhhcCCCCCCCCeEEEEEecCCcccccc-CcH
Confidence 0000000111 0000000 000001111112222221110 1222233 3678889999999985 567
Q ss_pred HHHHhCCCcEEEEeCCCCC-CCccChHHHHHHHHHHHHhhhC
Q 005554 643 MFKEHCAGIVIRELDAGHC-PHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 643 ~~~~~~~~~~~~~~~~GH~-~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
.+++.-|++++..+.+||. ..+-+-+.+...|.+-|++...
T Consensus 327 ~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 327 SLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred HHHHhCCCCEEEEeecCceeeeehhchHHHHHHHHHHHhhhh
Confidence 7889999999999999995 4556788999999999988663
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00014 Score=78.81 Aligned_cols=118 Identities=15% Similarity=0.058 Sum_probs=83.5
Q ss_pred EcCeEEEEEEeCCC----CCeEEEEc--CCCCC---hHHHHHHHH---HHhcCCCEEEEeCCCCCcCCCCCCcCCCHHH-
Q 005554 413 WNGYQIQYTVAGKE----GPAILLVH--GFGAF---LEHYRDNIY---DIADGGNRVWAITLLGFGRSEKPNIVYTELM- 479 (691)
Q Consensus 413 ~~g~~i~y~~~g~~----~p~VlliH--G~~~~---~~~~~~~~~---~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~- 479 (691)
-||++|+...+-+. .|+++..+ -+.-. ...-..... .++.+||.||..|.||.|.|++....+.-++
T Consensus 27 RDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~ 106 (563)
T COG2936 27 RDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREA 106 (563)
T ss_pred cCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccc
Confidence 38999987776543 57777777 22211 111112333 5778899999999999999998654332222
Q ss_pred -HHHHHHHHHHHhCC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 480 -WSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 480 -~a~dl~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
-..|+.+++..... .++..+|.|++|...+.+|+..|..+++++...+...
T Consensus 107 ~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 107 EDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 23366667666544 6899999999999999999998888999988887644
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=76.67 Aligned_cols=159 Identities=17% Similarity=0.098 Sum_probs=99.4
Q ss_pred CCeEEEEcCCC---CChHHHHHHHHHHhcCC--CEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHH--------HhCC
Q 005554 427 GPAILLVHGFG---AFLEHYRDNIYDIADGG--NRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV--------EVVG 493 (691)
Q Consensus 427 ~p~VlliHG~~---~~~~~~~~~~~~L~~~G--~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~--------~l~~ 493 (691)
.|.+|++||.+ .+++.+...-..|...| ..|.++|++.- .++.++...++.+..+.. ++..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~------igG~nI~h~ae~~vSf~r~kvlei~gefph 249 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP------IGGANIKHAAEYSVSFDRYKVLEITGEFPH 249 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC------CCCcchHHHHHHHHHHhhhhhhhhhccCCC
Confidence 67899999987 12222222223333222 55677777532 112445555555554443 2334
Q ss_pred cCEEEEEeChhHHHHHHHHHhCc-cccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhh
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWP-AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQC 572 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P-~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (691)
.+++|+|.|||+.++...+...- ..|+++|+++-+......
T Consensus 250 a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg-------------------------------------- 291 (784)
T KOG3253|consen 250 APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG-------------------------------------- 291 (784)
T ss_pred CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc--------------------------------------
Confidence 78999999999888887766543 248888888754221100
Q ss_pred cCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCcE
Q 005554 573 YPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV 652 (691)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~ 652 (691)
+... ..+.+-.++.|+|||.|.+|..+++..+.+.-.++....+
T Consensus 292 ----prgi--------------------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~e 335 (784)
T KOG3253|consen 292 ----PRGI--------------------------------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVE 335 (784)
T ss_pred ----ccCC--------------------------------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccce
Confidence 0000 0112345689999999999999999877776667777778
Q ss_pred EEEe-CCCCCCCcc
Q 005554 653 IREL-DAGHCPHDE 665 (691)
Q Consensus 653 ~~~~-~~GH~~~~e 665 (691)
++++ +++|.+-.-
T Consensus 336 lhVI~~adhsmaip 349 (784)
T KOG3253|consen 336 LHVIGGADHSMAIP 349 (784)
T ss_pred EEEecCCCccccCC
Confidence 8888 899976653
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0057 Score=61.42 Aligned_cols=101 Identities=10% Similarity=0.163 Sum_probs=66.7
Q ss_pred CCeEEEEcCCCCChH--HHHHHHHHHhc-CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC--cCEEEEEe
Q 005554 427 GPAILLVHGFGAFLE--HYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG--EPVHLIGN 501 (691)
Q Consensus 427 ~p~VlliHG~~~~~~--~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~--~~v~lvGh 501 (691)
..|||+.||+|.+.. ....+.+.+.+ .|..++++.. |.+....--..+.++++.+.+-+..... +-+++||+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEEE
Confidence 458999999987643 44455555533 2666766654 3332222223455555555554443211 45999999
Q ss_pred ChhHHHHHHHHHhCcc--ccceEEEecCCCC
Q 005554 502 SIGGYFVAIVACLWPA--VVKSVVLINSAGN 530 (691)
Q Consensus 502 S~GG~ial~~A~~~P~--~V~~lVll~~~~~ 530 (691)
|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999887 5999999998643
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00043 Score=69.62 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=63.0
Q ss_pred CCeEEEEcCCCCChHHH--HHHHHHHhcCC----CEEEEeCCCCCcCCC-----------CCCcCC---C-HHHHHHHHH
Q 005554 427 GPAILLVHGFGAFLEHY--RDNIYDIADGG----NRVWAITLLGFGRSE-----------KPNIVY---T-ELMWSELLR 485 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~--~~~~~~L~~~G----~~Vi~~D~~G~G~S~-----------~~~~~~---s-~~~~a~dl~ 485 (691)
-|+|+++||.......+ ...+..+...| .-||+++..+.+... .....- . .+.+.++|.
T Consensus 24 ~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~ 103 (251)
T PF00756_consen 24 YPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELI 103 (251)
T ss_dssp EEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHH
T ss_pred CEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccch
Confidence 46899999973222222 22333333332 345666655544110 001111 1 233455666
Q ss_pred HHHHHh-CC--cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 486 DFTVEV-VG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 486 ~ll~~l-~~--~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
.+++.. .. ++..|+|+||||..|+.++.+||+.+.+++.++|..
T Consensus 104 p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 104 PYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred hHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 666543 33 237999999999999999999999999999999863
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.012 Score=63.50 Aligned_cols=122 Identities=15% Similarity=0.107 Sum_probs=74.0
Q ss_pred EEEEEEc---CeEEEEEEeCC-----CCCeEEEEcCCCCChHHHHHHH---H-------------HHhc------CCCEE
Q 005554 408 TRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNI---Y-------------DIAD------GGNRV 457 (691)
Q Consensus 408 ~~~~~~~---g~~i~y~~~g~-----~~p~VlliHG~~~~~~~~~~~~---~-------------~L~~------~G~~V 457 (691)
.-++.++ +..++|.-... +.|.||.+.|.++++..+--+. + .|.. +-.++
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 118 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANI 118 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcE
Confidence 4466664 46677765432 2689999999988766432111 1 1111 12579
Q ss_pred EEeC-CCCCcCCCCCCc-CC-CHHHHHHHHHHHHHH----h---CCcCEEEEEeChhHHHHHHHHHhC----------cc
Q 005554 458 WAIT-LLGFGRSEKPNI-VY-TELMWSELLRDFTVE----V---VGEPVHLIGNSIGGYFVAIVACLW----------PA 517 (691)
Q Consensus 458 i~~D-~~G~G~S~~~~~-~~-s~~~~a~dl~~ll~~----l---~~~~v~lvGhS~GG~ial~~A~~~----------P~ 517 (691)
+.+| ..|.|.|..... .. +-.+.++++..++.. . ...+++|+|.|+||..+-.+|..- +-
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~i 198 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPI 198 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcc
Confidence 9999 669999864321 11 111223444444433 2 336899999999999887776531 12
Q ss_pred ccceEEEecCCC
Q 005554 518 VVKSVVLINSAG 529 (691)
Q Consensus 518 ~V~~lVll~~~~ 529 (691)
.++|+++-+|..
T Consensus 199 nLkGi~iGNg~t 210 (433)
T PLN03016 199 NLQGYMLGNPVT 210 (433)
T ss_pred cceeeEecCCCc
Confidence 578999888753
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00054 Score=69.42 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=71.0
Q ss_pred CCCeEEEEcCCCCChHH-HHHHHHHHhcCC--CEEEEeCCCCCcCC-----CCCCcCCCHHHHHHHHHHHHHHhCCcCEE
Q 005554 426 EGPAILLVHGFGAFLEH-YRDNIYDIADGG--NRVWAITLLGFGRS-----EKPNIVYTELMWSELLRDFTVEVVGEPVH 497 (691)
Q Consensus 426 ~~p~VlliHG~~~~~~~-~~~~~~~L~~~G--~~Vi~~D~~G~G~S-----~~~~~~~s~~~~a~dl~~ll~~l~~~~v~ 497 (691)
.+..++|+||+..+.+. -...++-....| ...+.+.||..|.- ++....++-..+...|..+.+....++++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 47799999999876432 223343333333 56788899877752 22333556666666666666666678899
Q ss_pred EEEeChhHHHHHHHHHh--------CccccceEEEecCCC
Q 005554 498 LIGNSIGGYFVAIVACL--------WPAVVKSVVLINSAG 529 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~--------~P~~V~~lVll~~~~ 529 (691)
|++||||..++++...+ -+.+++-+|+-+|-.
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999987653 234688888888753
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00088 Score=73.24 Aligned_cols=104 Identities=21% Similarity=0.256 Sum_probs=67.7
Q ss_pred CCeEEEEcCCCCChHHH--HHHHHHHhcC-CCEEEEeCCCCCcCCCCCC-------cCCCHHHHHHHHHHHHHHhCC---
Q 005554 427 GPAILLVHGFGAFLEHY--RDNIYDIADG-GNRVWAITLLGFGRSEKPN-------IVYTELMWSELLRDFTVEVVG--- 493 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~--~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~-------~~~s~~~~a~dl~~ll~~l~~--- 493 (691)
+|.+|++-|=+.-...+ ..++..|+++ |--|+++++|-+|.|.+-. .-++.++..+|+..+++++..
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 56566664433222211 2244555543 6789999999999997522 246889999999999876641
Q ss_pred ----cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 494 ----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 494 ----~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
.|++++|-|+||++|..+-.+||+.|.+.+.-+++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 4799999999999999999999999999999888754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00071 Score=64.85 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=72.6
Q ss_pred CeEEEEcCCCCChHHHHHHHHHHhcCC-----CEEEEeCCCCC----cCCCC----CC-------cCCCHHHHHHHHHHH
Q 005554 428 PAILLVHGFGAFLEHYRDNIYDIADGG-----NRVWAITLLGF----GRSEK----PN-------IVYTELMWSELLRDF 487 (691)
Q Consensus 428 p~VlliHG~~~~~~~~~~~~~~L~~~G-----~~Vi~~D~~G~----G~S~~----~~-------~~~s~~~~a~dl~~l 487 (691)
-|.|||||++++......++..|.+.+ -=++.+|--|- |.=++ |- ..-+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 388999999999999999999998763 12555665552 11011 10 123455666666666
Q ss_pred HH----HhCCcCEEEEEeChhHHHHHHHHHhCcc-----ccceEEEecCCCC
Q 005554 488 TV----EVVGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAGN 530 (691)
Q Consensus 488 l~----~l~~~~v~lvGhS~GG~ial~~A~~~P~-----~V~~lVll~~~~~ 530 (691)
+. +.++.++.+|||||||.-...|+..|-. .+..+|.++++.+
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 54 4567899999999999999999887532 3899999998754
|
|
| >COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0055 Score=62.59 Aligned_cols=119 Identities=18% Similarity=0.150 Sum_probs=77.7
Q ss_pred CcEEEEEcCCCCCcCCHHHHHHHhCCCeEEEEEECCcccc---cCChhHHHHHHHHHHHHHHHHHhcCCcEEEEECCh--
Q 005554 45 GSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILS---RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV-- 119 (691)
Q Consensus 45 ~~~l~W~r~dlRl~DN~aL~~A~~~~~~~~~f~~~~~~~~---~~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g~~-- 119 (691)
+++++|.=-|.-.++++||.. ...++..+-| +-..+. .+-..+.-++.-+++.+.+.|+..|.......-++
T Consensus 2 ~~~~~lvLgdQL~~~~~al~~--d~~~~~vllv-E~~~~a~~~r~HkqKl~lv~aAMR~Fad~LraeG~~V~Y~~~~~~~ 78 (505)
T COG3046 2 MSSVVLVLGDQLSEDHSALGD--DRSQDGVLLV-ESAAEARYRRHHKQKLVLVFAAMRHFADELRAEGLKVRYERADDNS 78 (505)
T ss_pred CceEEEEeccccccccchhcc--CcccCcEEEe-hhHhHhhhhhcchhhhHHHHHHHHHHHHHHhhCCceeEEEEcCCcc
Confidence 457899999999999998866 2222222222 222211 22445677899999999999999999877665443
Q ss_pred -HHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCc
Q 005554 120 -ENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQT 173 (691)
Q Consensus 120 -~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~ 173 (691)
...|.+.++.+..+.|++.+--+.....+-+.+.. ..|+ ++..+.+.
T Consensus 79 ~~~~l~~~l~~~~~d~~~~~~p~~~~l~~~m~~L~~---~~g~----~i~~~~~~ 126 (505)
T COG3046 79 FGGELRRALEAYPGDRVQVQEPGDHRLEARMKSLSM---ALGI----EITEVENP 126 (505)
T ss_pred cchHHHHHHHhcCCCeEEEecCcchhHHHHHHhhhh---hcCc----eeEEecCc
Confidence 56788888999999999876544444443333332 3344 56665544
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00033 Score=64.94 Aligned_cols=105 Identities=20% Similarity=0.171 Sum_probs=69.6
Q ss_pred CCeEEEEcCCCCChHHHHH---HHHHHhcCCCEEEEeCC--CCC---cCCCCCC-----------------cCCCHHH-H
Q 005554 427 GPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITL--LGF---GRSEKPN-----------------IVYTELM-W 480 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~---~~~~L~~~G~~Vi~~D~--~G~---G~S~~~~-----------------~~~s~~~-~ 480 (691)
-|+|.++-|+.++.+.+.. +-..-.++|+.|+.+|- ||. |.++.-+ ..|.+.+ .
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4789999999998776642 33344567999999994 554 2222100 0122222 2
Q ss_pred HHHHHHHHHH----hCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCC
Q 005554 481 SELLRDFTVE----VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 481 a~dl~~ll~~----l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~ 531 (691)
.+.+.+++.. +...++.+.||||||.=|+..+.+.|.+.+++-...|..++
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 3344444432 22356899999999999999999999999998888876554
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0035 Score=65.41 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=98.0
Q ss_pred CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHh
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
.+++++|.|.|==|..+...|+. ..||++++-+.-..... ...+......
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~-----------------------------~~~l~h~y~~ 219 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNM-----------------------------KANLEHQYRS 219 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCc-----------------------------HHHHHHHHHH
Confidence 56889999999999999999994 56899888665431110 0111111122
Q ss_pred hcCCCCccccHHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHhCCCc
Q 005554 572 CYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651 (691)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~ 651 (691)
+-+..+..+.....+.+......+.+....... +......++++|.++|.|..|++..++...-.+.++....
T Consensus 220 yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~iv-------DP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K 292 (367)
T PF10142_consen 220 YGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIV-------DPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEK 292 (367)
T ss_pred hCCCCccchhhhhHhCchhhcCCHHHHHHHHhc-------CHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCe
Confidence 211233333333333333344444433322221 2223446779999999999999999986666666665555
Q ss_pred EEEEe-CCCCCCCccChHHHHHHHHHHHHhhhCCCCCC
Q 005554 652 VIREL-DAGHCPHDEKPEEVNSIISEWIVTIESKVPAE 688 (691)
Q Consensus 652 ~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~~~~~~~ 688 (691)
.+.++ +++|.... ..+.+.|..|+.......+-+
T Consensus 293 ~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 293 YLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred eEEeCCCCCcccch---HHHHHHHHHHHHHHHcCCCCC
Confidence 56666 99998877 678888999999876554433
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0015 Score=66.96 Aligned_cols=66 Identities=14% Similarity=0.238 Sum_probs=48.8
Q ss_pred hhcCCC-CcEEEEEeCCCCCCChhHHHHHHHHhCC-CcEEEEe-CCCCCCCccChH---HHHHHHHHHHHhh
Q 005554 616 LLEGFK-EKVLIIQGIKDPISDSKSKVAMFKEHCA-GIVIREL-DAGHCPHDEKPE---EVNSIISEWIVTI 681 (691)
Q Consensus 616 ~l~~i~-~PvLiI~G~~D~~vp~~~~~~~~~~~~~-~~~~~~~-~~GH~~~~e~pe---~v~~~I~~fL~~~ 681 (691)
.+..+. +|+|+++|..|..+|.......+..... .....+. +++|......+. +..+.+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344555 7999999999999999877776666554 4444444 888988865433 7888889998864
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.022 Score=61.61 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=75.9
Q ss_pred EEEEEc---CeEEEEEEeCC-----CCCeEEEEcCCCCChHHHHHHHH----------------HHhc------CCCEEE
Q 005554 409 RIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIY----------------DIAD------GGNRVW 458 (691)
Q Consensus 409 ~~~~~~---g~~i~y~~~g~-----~~p~VlliHG~~~~~~~~~~~~~----------------~L~~------~G~~Vi 458 (691)
.++.++ +..++|.-... ..|.||.+.|.++++..+-.+.+ .|.. +-.+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 455664 45677654432 26899999999887765532221 1111 125789
Q ss_pred EeC-CCCCcCCCCCC--cCCCHHHHHHHHHHHHHHh-------CCcCEEEEEeChhHHHHHHHHHhC----------ccc
Q 005554 459 AIT-LLGFGRSEKPN--IVYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACLW----------PAV 518 (691)
Q Consensus 459 ~~D-~~G~G~S~~~~--~~~s~~~~a~dl~~ll~~l-------~~~~v~lvGhS~GG~ial~~A~~~----------P~~ 518 (691)
.+| ..|.|.|-... ...+.++.++++..+++.. ...+++|.|.|+||..+-.+|..- +-.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 999 66999986432 2223333456666665442 235899999999999877776531 124
Q ss_pred cceEEEecCCCC
Q 005554 519 VKSVVLINSAGN 530 (691)
Q Consensus 519 V~~lVll~~~~~ 530 (691)
++|+++.++...
T Consensus 202 l~Gi~igng~td 213 (437)
T PLN02209 202 LQGYVLGNPITH 213 (437)
T ss_pred eeeEEecCcccC
Confidence 789999887643
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=71.80 Aligned_cols=100 Identities=18% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhc----------------CCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIAD----------------GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE 490 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~----------------~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~ 490 (691)
+-||+||+|..|+-..-+.++..... ..|+.+++|+-+- -..-.+.++.++++-+.+.++.
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe---~tAm~G~~l~dQtEYV~dAIk~ 165 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE---FTAMHGHILLDQTEYVNDAIKY 165 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch---hhhhccHhHHHHHHHHHHHHHH
Confidence 66999999999987666666554431 1356667765321 0011234566777666665543
Q ss_pred h----CC---------cCEEEEEeChhHHHHHHHHHh---CccccceEEEecCCC
Q 005554 491 V----VG---------EPVHLIGNSIGGYFVAIVACL---WPAVVKSVVLINSAG 529 (691)
Q Consensus 491 l----~~---------~~v~lvGhS~GG~ial~~A~~---~P~~V~~lVll~~~~ 529 (691)
+ .. +.+++|||||||.+|..++.. .++.|.-+|..+++.
T Consensus 166 ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 166 ILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 2 11 349999999999999877653 234566666666653
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0086 Score=58.13 Aligned_cols=98 Identities=14% Similarity=0.223 Sum_probs=68.7
Q ss_pred CeEEEEcCCCCChHH--HHHHHHHHhcC-CCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCC--cCEEEEEeC
Q 005554 428 PAILLVHGFGAFLEH--YRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG--EPVHLIGNS 502 (691)
Q Consensus 428 p~VlliHG~~~~~~~--~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~--~~v~lvGhS 502 (691)
.|+|++||++++... +..+.+.+.+. |..|++.|. |-| .....-....++++.+.+.+..... +-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 589999999887655 66677777664 788999986 444 1111122455566655555543222 459999999
Q ss_pred hhHHHHHHHHHhCcc-ccceEEEecCC
Q 005554 503 IGGYFVAIVACLWPA-VVKSVVLINSA 528 (691)
Q Consensus 503 ~GG~ial~~A~~~P~-~V~~lVll~~~ 528 (691)
.||.++-.++..-++ .|+.+|.++++
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCC
Confidence 999999998877543 59999999886
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.012 Score=60.86 Aligned_cols=102 Identities=19% Similarity=0.166 Sum_probs=68.8
Q ss_pred CCeEEEEcCCCCCh---HHHHHHHHHHhcCCCEEEEeCCCCC--cCCCC-----------CCcC----------------
Q 005554 427 GPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGF--GRSEK-----------PNIV---------------- 474 (691)
Q Consensus 427 ~p~VlliHG~~~~~---~~~~~~~~~L~~~G~~Vi~~D~~G~--G~S~~-----------~~~~---------------- 474 (691)
.-+||++||.+.+. ....++-..|.++|++++++.+|.- ..... ....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 34899999998774 4455677788899999999988871 10000 0000
Q ss_pred CCH----HHHHHHHHHHH---HHhCCcCEEEEEeChhHHHHHHHHHhCcc-ccceEEEecCC
Q 005554 475 YTE----LMWSELLRDFT---VEVVGEPVHLIGNSIGGYFVAIVACLWPA-VVKSVVLINSA 528 (691)
Q Consensus 475 ~s~----~~~a~dl~~ll---~~l~~~~v~lvGhS~GG~ial~~A~~~P~-~V~~lVll~~~ 528 (691)
-.. +.+..-|.+++ ...+..+++||||+.|+..++.+....+. .+.++|++++-
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 001 12222333333 34455669999999999999999988764 58999999985
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.003 Score=56.69 Aligned_cols=89 Identities=24% Similarity=0.331 Sum_probs=63.9
Q ss_pred EEEEcCCCCChHHHHHH--HHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHH
Q 005554 430 ILLVHGFGAFLEHYRDN--IYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (691)
Q Consensus 430 VlliHG~~~~~~~~~~~--~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~i 507 (691)
||.+|||.++....... .+.+.+. .+-+.+ |. |....++...++.+..++..++.....|+|.|+||+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~-p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------ST-PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ec-CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 79999998887766543 2333332 222222 22 2334578889999999999999888999999999999
Q ss_pred HHHHHHhCccccceEEEecCCCC
Q 005554 508 VAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 508 al~~A~~~P~~V~~lVll~~~~~ 530 (691)
|..++.++- ++ .|+++|+..
T Consensus 73 At~l~~~~G--ir-av~~NPav~ 92 (191)
T COG3150 73 ATWLGFLCG--IR-AVVFNPAVR 92 (191)
T ss_pred HHHHHHHhC--Ch-hhhcCCCcC
Confidence 999999864 44 455677643
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0025 Score=68.24 Aligned_cols=83 Identities=18% Similarity=0.134 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcCCCEE-----EE-eCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh---CCcCEEEEEeChhHHHHHHHH
Q 005554 442 HYRDNIYDIADGGNRV-----WA-ITLLGFGRSEKPNIVYTELMWSELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVA 512 (691)
Q Consensus 442 ~~~~~~~~L~~~G~~V-----i~-~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l---~~~~v~lvGhS~GG~ial~~A 512 (691)
.|..+++.|.+.||.. .+ +|+|--- . ..+++...+...++.. ..++++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~-----~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP-----A---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch-----h---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 7899999999888742 22 6776311 1 3334555555555443 257999999999999999988
Q ss_pred HhCcc------ccceEEEecCCCCCC
Q 005554 513 CLWPA------VVKSVVLINSAGNVI 532 (691)
Q Consensus 513 ~~~P~------~V~~lVll~~~~~~~ 532 (691)
...+. .|+++|.++++....
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCC
Confidence 87743 599999999875443
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0027 Score=70.77 Aligned_cols=103 Identities=18% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCC---ChHHHHHHHHHHhcC--CCEEEEeCCC----CCcCCCCC--CcCCCHHHHHHH---HHHHHHHh
Q 005554 426 EGPAILLVHGFGA---FLEHYRDNIYDIADG--GNRVWAITLL----GFGRSEKP--NIVYTELMWSEL---LRDFTVEV 491 (691)
Q Consensus 426 ~~p~VlliHG~~~---~~~~~~~~~~~L~~~--G~~Vi~~D~~----G~G~S~~~--~~~~s~~~~a~d---l~~ll~~l 491 (691)
+.|.||+|||.+. +...+ ....|... |+-|+++++| |++.+... ...+.+.|+... +.+-++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 4789999999642 22221 22333333 3899999998 33333221 223445554443 33444555
Q ss_pred CC--cCEEEEEeChhHHHHHHHHHh--CccccceEEEecCCCC
Q 005554 492 VG--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (691)
Q Consensus 492 ~~--~~v~lvGhS~GG~ial~~A~~--~P~~V~~lVll~~~~~ 530 (691)
+. ++|.|+|+|.||..+..++.. .+..++++|++++...
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 55 579999999999999888775 2457899999987643
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.051 Score=56.59 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=50.2
Q ss_pred CEEEEeCCC-CCcCCCCCCc-CC-CHHHHHHHHHHHHHHh-------CCcCEEEEEeChhHHHHHHHHHhC---------
Q 005554 455 NRVWAITLL-GFGRSEKPNI-VY-TELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACLW--------- 515 (691)
Q Consensus 455 ~~Vi~~D~~-G~G~S~~~~~-~~-s~~~~a~dl~~ll~~l-------~~~~v~lvGhS~GG~ial~~A~~~--------- 515 (691)
.+++.+|.| |.|.|-.... .+ +-+..++++..+++.+ ...+++|.|-|.||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999988 9999865321 22 2223345666555442 336899999999999888777642
Q ss_pred -ccccceEEEecCCCC
Q 005554 516 -PAVVKSVVLINSAGN 530 (691)
Q Consensus 516 -P~~V~~lVll~~~~~ 530 (691)
+-.++|+++-++...
T Consensus 82 ~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 82 PPINLQGYMLGNPVTY 97 (319)
T ss_pred CceeeeEEEeCCCCCC
Confidence 125788888887543
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.014 Score=60.72 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=69.5
Q ss_pred CCeEEEEcCCCCChH----H---HHHHHHHHhcCCCEEEEeCCCCCcCC-CCCCcCCCHHHHHHHHHHHHHHhCCcCEEE
Q 005554 427 GPAILLVHGFGAFLE----H---YRDNIYDIADGGNRVWAITLLGFGRS-EKPNIVYTELMWSELLRDFTVEVVGEPVHL 498 (691)
Q Consensus 427 ~p~VlliHG~~~~~~----~---~~~~~~~L~~~G~~Vi~~D~~G~G~S-~~~~~~~s~~~~a~dl~~ll~~l~~~~v~l 498 (691)
+|.||++||+|-... . ...+...|. ...++++|+.-...- ....-+..+.+.++-...+++..|.++++|
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~L 199 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIIL 199 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEE
Confidence 689999999864322 1 122223333 368899987543200 111234456677777777887778899999
Q ss_pred EEeChhHHHHHHHHHhC--c---cccceEEEecCCCCCC
Q 005554 499 IGNSIGGYFVAIVACLW--P---AVVKSVVLINSAGNVI 532 (691)
Q Consensus 499 vGhS~GG~ial~~A~~~--P---~~V~~lVll~~~~~~~ 532 (691)
+|-|.||.+++.+...- + ..-+++|+++|.....
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999876531 1 1357999999986654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.082 Score=56.85 Aligned_cols=124 Identities=15% Similarity=0.079 Sum_probs=79.1
Q ss_pred EEEEEEEc---CeEEEEEEeCC-----CCCeEEEEcCCCCChHHHHHHHHHHhc-----C-------------CCEEEEe
Q 005554 407 STRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIYDIAD-----G-------------GNRVWAI 460 (691)
Q Consensus 407 ~~~~~~~~---g~~i~y~~~g~-----~~p~VlliHG~~~~~~~~~~~~~~L~~-----~-------------G~~Vi~~ 460 (691)
..-++.++ +..++|.-... .+|.||.+.|+++.+..- .+..++.. . --+++-+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 34577776 78899875542 278999999998776443 33332211 1 1358888
Q ss_pred CCC-CCcCCCCCCc---CCCHHHHHHHHHHHHHH----h---CCcCEEEEEeChhHHHHHHHHHh----C-----c-ccc
Q 005554 461 TLL-GFGRSEKPNI---VYTELMWSELLRDFTVE----V---VGEPVHLIGNSIGGYFVAIVACL----W-----P-AVV 519 (691)
Q Consensus 461 D~~-G~G~S~~~~~---~~s~~~~a~dl~~ll~~----l---~~~~v~lvGhS~GG~ial~~A~~----~-----P-~~V 519 (691)
|.| |.|.|-.... ..+-+..++|+..++.. . ...+++|.|-|++|..+-.+|.. + | -.+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 866 8888864321 23444556666665543 2 33789999999999887777753 2 1 247
Q ss_pred ceEEEecCCCCC
Q 005554 520 KSVVLINSAGNV 531 (691)
Q Consensus 520 ~~lVll~~~~~~ 531 (691)
+|+++-+|....
T Consensus 204 kG~~IGNg~td~ 215 (454)
T KOG1282|consen 204 KGYAIGNGLTDP 215 (454)
T ss_pred eEEEecCcccCc
Confidence 888888876443
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.051 Score=59.65 Aligned_cols=106 Identities=20% Similarity=0.208 Sum_probs=72.9
Q ss_pred CCCeEEEEcCC-CCChH-HHHHHHHHHhcCCCEEEEeCCCCCcCCCC--------CCcCCCHHHHHHHHHHHHHHhCC--
Q 005554 426 EGPAILLVHGF-GAFLE-HYRDNIYDIADGGNRVWAITLLGFGRSEK--------PNIVYTELMWSELLRDFTVEVVG-- 493 (691)
Q Consensus 426 ~~p~VlliHG~-~~~~~-~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~--------~~~~~s~~~~a~dl~~ll~~l~~-- 493 (691)
++|++|..-|. |.+.. .|....-.|.++|+-.-....||=|.=.. ....-++.|+.+....+++.=-.
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 36677776663 33322 23333334667887666666787665332 12345788888777777754222
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~ 531 (691)
+.++++|-|.||+++...+...|+.++++|+-.|..++
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 56999999999999999999999999999999887553
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0024 Score=63.54 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCCCh---HHHHHHHHHHhc--CCCEEEEeCCCCCcCC-CCCC-cCCCHHHHHHHHHHHHHHhCC--cCEE
Q 005554 427 GPAILLVHGFGAFL---EHYRDNIYDIAD--GGNRVWAITLLGFGRS-EKPN-IVYTELMWSELLRDFTVEVVG--EPVH 497 (691)
Q Consensus 427 ~p~VlliHG~~~~~---~~~~~~~~~L~~--~G~~Vi~~D~~G~G~S-~~~~-~~~s~~~~a~dl~~ll~~l~~--~~v~ 497 (691)
..|||+.||+|.+. ..+..+.+.+.+ -|..|.+++. |-+.+ +... --.++.++++.+.+.+..... .-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 45899999998753 234444333332 2778888876 32211 1111 012455566666666654321 4599
Q ss_pred EEEeChhHHHHHHHHHhCcc-ccceEEEecCCCC
Q 005554 498 LIGNSIGGYFVAIVACLWPA-VVKSVVLINSAGN 530 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~P~-~V~~lVll~~~~~ 530 (691)
+||+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 99999999999999999864 6999999998643
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0094 Score=61.29 Aligned_cols=102 Identities=17% Similarity=0.152 Sum_probs=76.4
Q ss_pred CCeEEEEcCCCCChHHHHH---HHHHHhc-CCCEEEEeCCCCCcCCCCCC----------cCCCHHHHHHHHHHHHHHhC
Q 005554 427 GPAILLVHGFGAFLEHYRD---NIYDIAD-GGNRVWAITLLGFGRSEKPN----------IVYTELMWSELLRDFTVEVV 492 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~---~~~~L~~-~G~~Vi~~D~~G~G~S~~~~----------~~~s~~~~a~dl~~ll~~l~ 492 (691)
+-+|+|--|.-++-+.+.. ++-.++. .+--+|..+.|-+|+|.+=. +-++.++..+|...++.+++
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 3688999998777665542 3333332 24568899999999997511 23567777778888887775
Q ss_pred C------cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 493 G------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 493 ~------~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
. .+++.+|-|+||+++..+=.+||+.|.|.+.-+.+
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 4 57999999999999999999999999888776665
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.015 Score=49.82 Aligned_cols=71 Identities=14% Similarity=0.239 Sum_probs=42.9
Q ss_pred CCcchHHHHHHHhhhHH-HHHHHHHhhhccCCCCCceEEEEEEEcCeEEEEEEeCCC---CCeEEEEcCCCCChHHHHHH
Q 005554 371 FGYSAATIAAAADAVCS-MEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDN 446 (691)
Q Consensus 371 ~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~g~~---~p~VlliHG~~~~~~~~~~~ 446 (691)
.|....++..+++-+.. .+|.+..+. ...++...++++|.+||+....++ ..||||+||++++...|.++
T Consensus 38 ~G~~~~~l~~L~~yW~~~fDWr~~E~~------lN~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 38 YGTPLDWLKELVDYWRNEFDWRKHEAR------LNSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TSS-HHHHHHHHHHHHHT--HHHHHHH------HTTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred cCCCHHHHHHHHHHHhhcCChHHHHHH------HHcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 57777788777777663 566443322 235666778889999999876543 45999999999998777665
Q ss_pred H
Q 005554 447 I 447 (691)
Q Consensus 447 ~ 447 (691)
+
T Consensus 112 I 112 (112)
T PF06441_consen 112 I 112 (112)
T ss_dssp H
T ss_pred C
Confidence 3
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.17 Score=49.42 Aligned_cols=91 Identities=23% Similarity=0.245 Sum_probs=58.1
Q ss_pred eEEEEcCC--CC-ChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHH--------HHHHHHHHhCC----
Q 005554 429 AILLVHGF--GA-FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE--------LLRDFTVEVVG---- 493 (691)
Q Consensus 429 ~VlliHG~--~~-~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~--------dl~~ll~~l~~---- 493 (691)
.|=|+-|. |. ..-.|+.+.+.|+++||.|++.-+.- | ++-...++ .+..+.+.-+.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 44455553 22 34578899999999999999986521 1 11112222 12222222121
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
-|++-||||||+-+-+.+...++..-++-|+++-.
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 36788999999999999988877666788888753
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=49.26 Aligned_cols=61 Identities=15% Similarity=0.304 Sum_probs=50.8
Q ss_pred CCcEEEEEeCCCCCCChhHHHHHHHHhCCCcEEEEe-CCCCCCCccChHHHHHHHHHHHHhhh
Q 005554 621 KEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 621 ~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
..|+|+|.++.|+.+|.+ ..+.+.+.++++.++.. +.||-.+...-.-+.+.+.+||..-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~-~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE-GARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHH-HHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 589999999999999998 46667777888888777 88999887555778899999998643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0083 Score=63.70 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=68.0
Q ss_pred CCeEEEEcCCC---CChHHHHHHHHHHhcCC-CEEEEeCCC----CC------cCCCCCCcCCCHHHHH---HHHHHHHH
Q 005554 427 GPAILLVHGFG---AFLEHYRDNIYDIADGG-NRVWAITLL----GF------GRSEKPNIVYTELMWS---ELLRDFTV 489 (691)
Q Consensus 427 ~p~VlliHG~~---~~~~~~~~~~~~L~~~G-~~Vi~~D~~----G~------G~S~~~~~~~s~~~~a---~dl~~ll~ 489 (691)
.|.+|+|||.+ ++......--..|+++| +-|+++++| |+ +..+....+..+.|+. +.+.+-|+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 69999999963 33333233456677777 888888876 22 1111111234455543 45556677
Q ss_pred HhCC--cCEEEEEeChhHHHHHHHHHhCc---cccceEEEecCCCC
Q 005554 490 EVVG--EPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAGN 530 (691)
Q Consensus 490 ~l~~--~~v~lvGhS~GG~ial~~A~~~P---~~V~~lVll~~~~~ 530 (691)
++|. ++|.|+|+|.||+.++.+.+. | ..++++|+.++...
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 8887 469999999999999887764 4 36888888888754
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.094 Score=56.89 Aligned_cols=118 Identities=18% Similarity=0.135 Sum_probs=79.0
Q ss_pred EEEEcCeEEEEEEeCC-----CCCeEEEEcCCCCC--hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCC--------CcC
Q 005554 410 IWRWNGYQIQYTVAGK-----EGPAILLVHGFGAF--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKP--------NIV 474 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~-----~~p~VlliHG~~~~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~--------~~~ 474 (691)
..+-||.+|+|...++ +.|++|+--|...- .-.|........++|...+..+.||-|+=... ...
T Consensus 399 atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq 478 (648)
T COG1505 399 ATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQ 478 (648)
T ss_pred EEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcch
Confidence 4455899999987741 25677666554332 22345555667788999999999998764321 112
Q ss_pred CCHHHHHHHHHHHHHHhCC---cCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 475 YTELMWSELLRDFTVEVVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 475 ~s~~~~a~dl~~ll~~l~~---~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
-.++|+.....++++. ++ +++.+.|-|-||.+.-.+..++|+.+-++|+-.|.
T Consensus 479 ~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 479 NVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred hhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 2344454444444433 23 46889999999999999999999988887776654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.018 Score=59.26 Aligned_cols=106 Identities=19% Similarity=0.139 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCCChHHHH---HHHHHHhcCCCEEEEeCC--------------CCCcCCCCCC-------c-CCCHHHH-
Q 005554 427 GPAILLVHGFGAFLEHYR---DNIYDIADGGNRVWAITL--------------LGFGRSEKPN-------I-VYTELMW- 480 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~---~~~~~L~~~G~~Vi~~D~--------------~G~G~S~~~~-------~-~~s~~~~- 480 (691)
=|+++++||..++...+. .+-....+.|..++++|- .|-+.|-..+ . .+.++++
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 467778888777643221 223333445677777632 2333322111 1 2555543
Q ss_pred HHHHHHHHHH-hCC----cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCCC
Q 005554 481 SELLRDFTVE-VVG----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 481 a~dl~~ll~~-l~~----~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~~ 532 (691)
.+.+-..+++ ... +...++||||||.=|+.+|+++|++++.+..+++...+.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 4455544443 331 268999999999999999999999999999998875543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.019 Score=52.80 Aligned_cols=50 Identities=14% Similarity=0.215 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHh----CCcCEEEEEeChhHHHHHHHHHhCcc----ccceEEEecCCC
Q 005554 480 WSELLRDFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPA----VVKSVVLINSAG 529 (691)
Q Consensus 480 ~a~dl~~ll~~l----~~~~v~lvGhS~GG~ial~~A~~~P~----~V~~lVll~~~~ 529 (691)
+.+.+...++.. ...+++++|||+||.+|..++..... .+..++.++++.
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344444444443 56789999999999999999987754 567788887763
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.0074 Score=63.50 Aligned_cols=89 Identities=17% Similarity=0.026 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhcCCCE------EEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHh
Q 005554 441 EHYRDNIYDIADGGNR------VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 441 ~~~~~~~~~L~~~G~~------Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~ 514 (691)
..|..+++.|..-||. -..+|+|=.-. .....+..+..+..-|+...+.-+.+|++||+|||||.+.+.+...
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~-~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYH-NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccC-ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhc
Confidence 5788899999988876 34567762110 0111123344455555555555666999999999999999999988
Q ss_pred Ccc--------ccceEEEecCCCC
Q 005554 515 WPA--------VVKSVVLINSAGN 530 (691)
Q Consensus 515 ~P~--------~V~~lVll~~~~~ 530 (691)
+++ .|+++|-++++..
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred ccccchhHHHHHHHHHHccCchhc
Confidence 876 3777777776533
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.025 Score=63.77 Aligned_cols=103 Identities=20% Similarity=0.108 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCC---Ch-HHHHHHHHHHhcCCCEEEEeCCC----CCcCCCCC--C-cCCCHHHHHHHHHHH---HHHhC
Q 005554 427 GPAILLVHGFGA---FL-EHYRDNIYDIADGGNRVWAITLL----GFGRSEKP--N-IVYTELMWSELLRDF---TVEVV 492 (691)
Q Consensus 427 ~p~VlliHG~~~---~~-~~~~~~~~~L~~~G~~Vi~~D~~----G~G~S~~~--~-~~~s~~~~a~dl~~l---l~~l~ 492 (691)
-|++|+|||.+. +. .....-...+.+++.-||++++| |+-.+... . ..+.+.|+...|.-+ |...|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 489999999642 22 12223334455668999999987 44333222 1 456666665544444 44556
Q ss_pred C--cCEEEEEeChhHHHHHHHHHhC--ccccceEEEecCCC
Q 005554 493 G--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAG 529 (691)
Q Consensus 493 ~--~~v~lvGhS~GG~ial~~A~~~--P~~V~~lVll~~~~ 529 (691)
+ ++|.|+|||.||..+......- ...++++|+.++..
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 5 5699999999999988877652 24799999999854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.016 Score=63.10 Aligned_cols=88 Identities=14% Similarity=-0.009 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCcCCCCC--CcCCCHHHHHHHHHHHHHH----hCCcCEEEEEeChhHHHHHHHHHhC
Q 005554 442 HYRDNIYDIADGGNRVWAITLLGFGRSEKP--NIVYTELMWSELLRDFTVE----VVGEPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 442 ~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~--~~~~s~~~~a~dl~~ll~~----l~~~~v~lvGhS~GG~ial~~A~~~ 515 (691)
.|..+++.|++.||. -.|+.|....-+. ......+.+-..+..+++. -+.++++|+||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 678999999999986 2333332221111 1011123444445555443 3458999999999999999876532
Q ss_pred -----------c----cccceEEEecCCCCC
Q 005554 516 -----------P----AVVKSVVLINSAGNV 531 (691)
Q Consensus 516 -----------P----~~V~~lVll~~~~~~ 531 (691)
+ ..|++.|.++++...
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCC
Confidence 1 258999999987443
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.073 Score=49.80 Aligned_cols=102 Identities=20% Similarity=0.266 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCCC-hHHHH---------------HHHHHHhcCCCEEEEeCCCC---CcCCCCCCcCC--C-HHHHHHHH
Q 005554 427 GPAILLVHGFGAF-LEHYR---------------DNIYDIADGGNRVWAITLLG---FGRSEKPNIVY--T-ELMWSELL 484 (691)
Q Consensus 427 ~p~VlliHG~~~~-~~~~~---------------~~~~~L~~~G~~Vi~~D~~G---~G~S~~~~~~~--s-~~~~a~dl 484 (691)
...+|+|||.|.- ...|. ++++.-.+.||.|+..+.-- +-.+...+..| + .+...-..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 5589999997642 23332 34555556699999987431 11111111111 2 22222223
Q ss_pred HHHHHHhCCcCEEEEEeChhHHHHHHHHHhCcc--ccceEEEecCC
Q 005554 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPA--VVKSVVLINSA 528 (691)
Q Consensus 485 ~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~--~V~~lVll~~~ 528 (691)
..++.-.....++++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 334444455789999999999999999999885 68888888776
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.036 Score=60.34 Aligned_cols=103 Identities=16% Similarity=0.099 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCC-Ch-HHHHHHHHHHhcCCCEEEEeCCCCCcCCCC---CC-----cCCCHHHHHHHHHHHHHHh--CCc
Q 005554 427 GPAILLVHGFGA-FL-EHYRDNIYDIADGGNRVWAITLLGFGRSEK---PN-----IVYTELMWSELLRDFTVEV--VGE 494 (691)
Q Consensus 427 ~p~VlliHG~~~-~~-~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~---~~-----~~~s~~~~a~dl~~ll~~l--~~~ 494 (691)
+|.+|..+|.-+ +- -.|..--..|.+.|+-....|.||-|.=.. .. ..-+++|+..-...+++.= ...
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~ 549 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPS 549 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCcc
Confidence 567776666422 21 123222223455788777889999775432 11 2345666666666665431 236
Q ss_pred CEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 495 ~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
+..+.|.|.||.++..++..+|+.+.++|+--|..
T Consensus 550 kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 550 KLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred ceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 78999999999999999999999999998877653
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.096 Score=54.80 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=31.6
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~ 529 (691)
-|++++|+|.||++|..+|..-|..+.++|=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999999999999999888766653
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.036 Score=57.09 Aligned_cols=86 Identities=19% Similarity=0.169 Sum_probs=67.2
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHh----CCcCEEEEEeC
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----VGEPVHLIGNS 502 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l----~~~~v~lvGhS 502 (691)
...-||+.|=|+..+.=+.+.+.|.++|+.|+.+|-.-|=.|.+ +.++.++|+..+++.. +.+++.|+|+|
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-----tPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-----TPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-----CHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 44677888888877766789999999999999999665655543 5677888888888654 55889999999
Q ss_pred hhHHHHHHHHHhCcc
Q 005554 503 IGGYFVAIVACLWPA 517 (691)
Q Consensus 503 ~GG~ial~~A~~~P~ 517 (691)
+|+-+.-..-.+.|.
T Consensus 335 fGADvlP~~~n~L~~ 349 (456)
T COG3946 335 FGADVLPFAYNRLPP 349 (456)
T ss_pred ccchhhHHHHHhCCH
Confidence 999887776665554
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.55 E-value=2.2 Score=42.30 Aligned_cols=102 Identities=10% Similarity=0.057 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCCC-hHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhH
Q 005554 427 GPAILLVHGFGAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (691)
Q Consensus 427 ~p~VlliHG~~~~-~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG 505 (691)
.|.||++-.+.++ ....+..++.|... ..|+..|+-.--.-....+.++++++.+.+.+.+..+|.+ +++++.+.-+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 4677777777665 45566778888775 7899999865443333456899999999999999999865 8888887654
Q ss_pred H-----HHHHHHHhCccccceEEEecCCCC
Q 005554 506 Y-----FVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 506 ~-----ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
. ++++.+...|..-..+++++++..
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 4 444444556777889999998754
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.039 Score=49.68 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhC
Q 005554 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 479 ~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~ 515 (691)
...+.+..+++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4556666666666666799999999999999988763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.052 Score=53.07 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHhC----ccccceEEEecCCCC
Q 005554 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW----PAVVKSVVLINSAGN 530 (691)
Q Consensus 479 ~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~----P~~V~~lVll~~~~~ 530 (691)
...+.+..+++..+. ++.+.|||.||.+|..+|+.. .++|.+++..++++.
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 344555555655554 599999999999999998873 357899999998754
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.11 Score=55.23 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCCCChHHHH-----HHHHHHhcCCCEEEEeCCCCCcCCCCCC-------cCCCHHHHHHHHHHHHHHhC
Q 005554 425 KEGPAILLVHGFGAFLEHYR-----DNIYDIADGGNRVWAITLLGFGRSEKPN-------IVYTELMWSELLRDFTVEVV 492 (691)
Q Consensus 425 ~~~p~VlliHG~~~~~~~~~-----~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-------~~~s~~~~a~dl~~ll~~l~ 492 (691)
+++|..|+|-|=|.-...|- .....-.+.|-.|+.+++|-+|.|.+.. .-.+.++...|+.++++++.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 35788888887443332221 1222223347899999999999886422 13577888899999998875
Q ss_pred C-------cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCC
Q 005554 493 G-------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 493 ~-------~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~ 531 (691)
. .+++.+|.|+-|.++..+=.+||+.+.|.|.-+++...
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 4 28999999999999999999999999999988776443
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.038 Score=57.35 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=85.7
Q ss_pred EEEEEEeCCCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCCc---CCCHHHHHHHHHHHHHHhCC
Q 005554 417 QIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSELLRDFTVEVVG 493 (691)
Q Consensus 417 ~i~y~~~g~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~---~~s~~~~a~dl~~ll~~l~~ 493 (691)
+|...+.+.+.|+|+..-|++.+....+.-...|.+ -+-+.+++|-+|.|.+.+. .+++++.+.|...+++.+..
T Consensus 53 RvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 53 RVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred EEEEEEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 455556666689999999998764333222223333 4779999999999987553 56899999999999888753
Q ss_pred ---cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 494 ---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 494 ---~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
.+.+--|.|-||+.++.+=.-||+.|.+.|.-..+.+
T Consensus 131 iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred hccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 6788899999999999988889999999987666543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.093 Score=51.70 Aligned_cols=48 Identities=29% Similarity=0.475 Sum_probs=38.5
Q ss_pred HHHHHHHHHH-h--CCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 481 SELLRDFTVE-V--VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 481 a~dl~~ll~~-l--~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
.+.+.-+++. . +.++-.++|||+||.+++.....+|+.+...++++|.
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3444445544 2 3356899999999999999999999999999999986
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.12 Score=46.77 Aligned_cols=112 Identities=16% Similarity=0.272 Sum_probs=69.5
Q ss_pred CeEEEEEEeCCCCCeEEEEcCCCCChHHHHH--HHHHHh---cCC-CEEEEeCCCCCcCCCC----CCcCCCHHHHHHHH
Q 005554 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRD--NIYDIA---DGG-NRVWAITLLGFGRSEK----PNIVYTELMWSELL 484 (691)
Q Consensus 415 g~~i~y~~~g~~~p~VlliHG~~~~~~~~~~--~~~~L~---~~G-~~Vi~~D~~G~G~S~~----~~~~~s~~~~a~dl 484 (691)
+.++.+..+|..+.+||+.+--++....|.. .+..|+ +.| ...++++ |-..-+. .......+.....-
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~Aye 91 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYE 91 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHH
Confidence 3456667778777788888877776666653 233333 334 3444443 3221111 11111233333333
Q ss_pred HHHHHHhCCcCEEEEEeChhHHHHHHHHHhCccccceEEEecCC
Q 005554 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 485 ~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~ 528 (691)
.-++++.-....++-|.||||..|..+.-++|+...++|.+++.
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 44555544456778899999999999999999999999999986
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.62 E-value=3.5 Score=48.60 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCCCChHHHHHHHHHHhcCCCEEEEeCCCCCcCCC-CCCcCCCHHHHHHHHHHHHHHhCC-cCEEEEEeC
Q 005554 425 KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE-KPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNS 502 (691)
Q Consensus 425 ~~~p~VlliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~-~~~~~~s~~~~a~dl~~ll~~l~~-~~v~lvGhS 502 (691)
.+.|+++|+|.+-+....+..++..|. .|.||.-- ......++++.+.....-++.+.. .|..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 358999999998777666666665542 24444322 222345788888877777777654 789999999
Q ss_pred hhHHHHHHHHHhCc--cccceEEEecCCCC
Q 005554 503 IGGYFVAIVACLWP--AVVKSVVLINSAGN 530 (691)
Q Consensus 503 ~GG~ial~~A~~~P--~~V~~lVll~~~~~ 530 (691)
+|+.++..+|.... +....+|++++...
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999987543 34667999998743
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.17 Score=49.95 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=20.3
Q ss_pred CCcCEEEEEeChhHHHHHHHHHhC
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~ 515 (691)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 446799999999999999988753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.26 E-value=1.7 Score=39.05 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCCChHHHHHHHHHHhcCCCE-EEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHHHHhCCcCEEEEEeChhH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNR-VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~L~~~G~~-Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS~GG 505 (691)
...||+.-|+|..+.....++ ...++. ++++|+..... +++... .+.+.||++|||-
T Consensus 11 d~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~l------dfDfsA-------------y~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNL------DFDFSA-------------YRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCc------ccchhh-------------hhhhhhhhhhHHH
Confidence 347888889998877665544 223454 57888864421 122111 1457899999999
Q ss_pred HHHHHHHHhCccccceEEEecCCCCCC
Q 005554 506 YFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 506 ~ial~~A~~~P~~V~~lVll~~~~~~~ 532 (691)
.+|-++..-.+ +++.+.+++.+.+-
T Consensus 69 wvAeR~lqg~~--lksatAiNGTgLpc 93 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTGLPC 93 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCCCCc
Confidence 99999887765 78888888876543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.24 Score=46.29 Aligned_cols=55 Identities=24% Similarity=0.216 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHhCC-----cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCCC
Q 005554 477 ELMWSELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 477 ~~~~a~dl~~ll~~l~~-----~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~~ 531 (691)
-+.-+..|..+++.|.. ..+.++|||+|+.++-..+...+..+..+|++++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 44556677777766532 46899999999999999888767789999999987654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.19 E-value=2.3 Score=44.14 Aligned_cols=235 Identities=11% Similarity=0.052 Sum_probs=120.5
Q ss_pred CCeEEEEcCCCCChHHH-HHHHHHHhcCCCEEEEeCCCCCcCCCCCC-cCCCHHHHHHHHHHHHHHhC--CcCEEEEEeC
Q 005554 427 GPAILLVHGFGAFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVV--GEPVHLIGNS 502 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~-~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~dl~~ll~~l~--~~~v~lvGhS 502 (691)
..+|+++=||.+..+-+ ........+.||.++.+-.|-+-..-... ...+.....+-+.+++...+ ..++++--.|
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 43666666666654443 34556666779999998877654333222 34566666778888887766 3567777899
Q ss_pred hhHHHHHHHH---H-hC-c---cccceEEEecCCCCCCCchhhhhhhhhhhcCChhhhhhHHHHHHHHhhHHHHHHhhcC
Q 005554 503 IGGYFVAIVA---C-LW-P---AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYP 574 (691)
Q Consensus 503 ~GG~ial~~A---~-~~-P---~~V~~lVll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (691)
+||...+..- . ++ | +.+.+++..+.+....+-....+..... .... ....+....+.
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-------~~~~--------~~~~~~~~~~~ 182 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-------PPDD--------YVARWARLNYH 182 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-------Cchh--------hHHHHHhcCeE
Confidence 9998776533 1 12 2 3466677777665433221111110000 0000 00000110000
Q ss_pred CCC--cccc---HHHHHHHHHhcCCcchHHHHHHHhccccCcchHhhhcCCCCcEEEEEeCCCCCCChhHHHHHHHHh--
Q 005554 575 TRR--ERAD---DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH-- 647 (691)
Q Consensus 575 ~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~-- 647 (691)
... .... .......+... .......+-.. ....-.....+.+.+.+..|.++|.+...+..+..
T Consensus 183 i~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~r--------~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~ 253 (350)
T KOG2521|consen 183 ITLLTMAGNEGGAYLLGPLAEKI-SMSRKYHFLDR--------YEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRRE 253 (350)
T ss_pred EEEEEeeecccchhhhhhhhhcc-ccccchHHHHH--------HHhhhhcccccceeecCCccccccHHHHHHHHHHHHh
Confidence 000 0000 00000000000 00000000000 01111223568889999999999998655553332
Q ss_pred -CCCcEEEEe-CCCCCCCccC-hHHHHHHHHHHHHhhhCCC
Q 005554 648 -CAGIVIREL-DAGHCPHDEK-PEEVNSIISEWIVTIESKV 685 (691)
Q Consensus 648 -~~~~~~~~~-~~GH~~~~e~-pe~v~~~I~~fL~~~~~~~ 685 (691)
.-+.+.+-. ++-|..+... |..+.+...+|++......
T Consensus 254 ~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 254 KGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 223333333 8899888765 9999999999999876543
|
|
| >PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.92 Score=44.26 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=64.3
Q ss_pred EEEEcCCCCCcCCHHHHHHHhCCCeEEEEEECCcc-cc--cCChhHHHHHHHHHHHHHHHHHhcCCcEEEEEC-------
Q 005554 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRI-LS--RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFG------- 117 (691)
Q Consensus 48 l~W~r~dlRl~DN~aL~~A~~~~~~~~~f~~~~~~-~~--~~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~g------- 117 (691)
|.|+=-|-=..++++|.. ... -..|+.+.... .. .+-..+..+++-+++.+.+.|++.|..+..+.-
T Consensus 1 L~lIlgdQL~~~~~~l~~-~~~--~~~v~mvE~~~~~~~~~~HkqKl~l~~saMRhfa~~L~~~G~~V~Y~~~~~~~~~~ 77 (224)
T PF04244_consen 1 LRLILGDQLFEDHPALRD-DPA--DDRVLMVEVPEEFTYVPHHKQKLVLFFSAMRHFADELRAKGFRVHYIELDDPENTQ 77 (224)
T ss_dssp EEE--TT---TT-HHHHT--TT--T-EEEEE--HHHHHSS---HHHHHHHHHHHHHHHHHHHHTT--EEEE-TT-TT--S
T ss_pred CeEeccCCCCCccccccc-CCC--CCEEEEEEchHHhCcCcccHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCccccc
Confidence 455556666778888866 222 22444444332 22 235678899999999999999999999888753
Q ss_pred ChHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHhhcCCCCCCceeEeeCcceecc
Q 005554 118 RVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDI 178 (691)
Q Consensus 118 ~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~l~~~ 178 (691)
+-.+.|.+++++++++.|.+-. |.+..-.+.+.+.+.+.|| ++..+.+..++-.
T Consensus 78 s~~~~L~~~~~~~~~~~~~~~~---P~d~~l~~~l~~~~~~~~i----~~~~~~~~~Fl~s 131 (224)
T PF04244_consen 78 SFEDALARALKQHGIDRLHVME---PGDYRLEQRLESLAQQLGI----PLEVLEDPHFLTS 131 (224)
T ss_dssp SHHHHHHHHHHHH----EEEE-----S-HHHHHHHHH----SSS-----EEEE--TTSSS-
T ss_pred cHHHHHHHHHHHcCCCEEEEEC---CCCHHHHHHHHhhhcccCC----ceEEeCCCCccCC
Confidence 3467888999999999999864 4555555667777777776 7777766655444
|
; PDB: 3ZXS_A. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.29 Score=52.21 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHh---C-----ccccceEEEecCC
Q 005554 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL---W-----PAVVKSVVLINSA 528 (691)
Q Consensus 477 ~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~---~-----P~~V~~lVll~~~ 528 (691)
..++.+.+.+++......++++.|||+||.+|..+|+. + .+++.+++..+.+
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 34455566666666666789999999999999997652 1 1234456666654
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.39 Score=48.10 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=33.3
Q ss_pred cCEEEEEeChhHHHHHHHHHhCccccceEEEecCCCC
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~P~~V~~lVll~~~~~ 530 (691)
..-+|+|-|+||.+++..+..||+++-.++..+|...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 4578999999999999999999999999999988754
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.36 Score=51.68 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHHh---C-----ccccceEEEecCC
Q 005554 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL---W-----PAVVKSVVLINSA 528 (691)
Q Consensus 478 ~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~~---~-----P~~V~~lVll~~~ 528 (691)
.++.+.+..+++.....++++.|||+||.+|..+|.. + ..++.+++..+++
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 3556677777777766789999999999999998853 1 1234566666654
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.35 Score=51.16 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhCCcC--EEEEEeChhHHHHHHHHHh
Q 005554 481 SELLRDFTVEVVGEP--VHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 481 a~dl~~ll~~l~~~~--v~lvGhS~GG~ial~~A~~ 514 (691)
...|..+++.....+ +++.|||+||.+|+.+|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334444454444444 8999999999999998864
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.29 Score=51.00 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCC-ChHHHHHHHHHHhcCCCEEEEeCCCCCcCCCCCC---cCCCHHHHHHHHHHHHHHhCCcCEEEEEeC
Q 005554 427 GPAILLVHGFGA-FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN---IVYTELMWSELLRDFTVEVVGEPVHLIGNS 502 (691)
Q Consensus 427 ~p~VlliHG~~~-~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~---~~~s~~~~a~dl~~ll~~l~~~~v~lvGhS 502 (691)
+-.|+++||+-+ +...|...+...... +.=..+..+|+-...... ..+=-+..++++.+.+....+.++..+|||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 458999999866 678888877777664 221133333332222111 111112234445555444556899999999
Q ss_pred hhHHHHHHHH
Q 005554 503 IGGYFVAIVA 512 (691)
Q Consensus 503 ~GG~ial~~A 512 (691)
+||.++..+.
T Consensus 159 LGGLvar~AI 168 (405)
T KOG4372|consen 159 LGGLVARYAI 168 (405)
T ss_pred cCCeeeeEEE
Confidence 9998876543
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.33 Score=51.34 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCc--CEEEEEeChhHHHHHHHHHh
Q 005554 478 LMWSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 478 ~~~a~dl~~ll~~l~~~--~v~lvGhS~GG~ial~~A~~ 514 (691)
+++.++|..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44566777777665443 68999999999999998864
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.30 E-value=0.92 Score=48.76 Aligned_cols=102 Identities=18% Similarity=0.078 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCCChHHHHHHHHH----H----hcC----------CCEEEEeC-CCCCcCCCC--CCcCCCHHHHHHHHH
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYD----I----ADG----------GNRVWAIT-LLGFGRSEK--PNIVYTELMWSELLR 485 (691)
Q Consensus 427 ~p~VlliHG~~~~~~~~~~~~~~----L----~~~----------G~~Vi~~D-~~G~G~S~~--~~~~~s~~~~a~dl~ 485 (691)
.|.++.+.|.++++..|..+.+. + ... .-.++.+| .-|.|.|.. ....-+.....+|+.
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 68899999999998887655321 0 000 12588899 669999874 233334444445555
Q ss_pred HHHH-------HhCC--cCEEEEEeChhHHHHHHHHHhCcc---ccceEEEecCC
Q 005554 486 DFTV-------EVVG--EPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSA 528 (691)
Q Consensus 486 ~ll~-------~l~~--~~v~lvGhS~GG~ial~~A~~~P~---~V~~lVll~~~ 528 (691)
.+.+ +... .+.+|+|-|+||.-+..+|..--+ ..+++|++++.
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 4443 3333 489999999999999988876443 35677766664
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.69 Score=43.59 Aligned_cols=74 Identities=14% Similarity=0.007 Sum_probs=41.9
Q ss_pred CEEEEeCCCCCcCCCCCCcCCCHHHHHHHHHHHH----HHhCCcCEEEEEeChhHHHHHHHHHh------CccccceEEE
Q 005554 455 NRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT----VEVVGEPVHLIGNSIGGYFVAIVACL------WPAVVKSVVL 524 (691)
Q Consensus 455 ~~Vi~~D~~G~G~S~~~~~~~s~~~~a~dl~~ll----~~l~~~~v~lvGhS~GG~ial~~A~~------~P~~V~~lVl 524 (691)
..+..+++|-..... ....+...=++.+...+ ..-...+++|+|+|.|+.++..++.. ..++|.++|+
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 556666766433211 11112333333333333 33344689999999999999999877 2357999999
Q ss_pred ecCCCC
Q 005554 525 INSAGN 530 (691)
Q Consensus 525 l~~~~~ 530 (691)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 987533
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.66 Score=44.33 Aligned_cols=68 Identities=10% Similarity=-0.069 Sum_probs=45.7
Q ss_pred HHHHhcCCCEEEEeCCCCCcCCCC-----C----CcCCCHHHHHHHHHHHHHHhCC-cCEEEEEeChhHHHHHHHHHhC
Q 005554 447 IYDIADGGNRVWAITLLGFGRSEK-----P----NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 447 ~~~L~~~G~~Vi~~D~~G~G~S~~-----~----~~~~s~~~~a~dl~~ll~~l~~-~~v~lvGhS~GG~ial~~A~~~ 515 (691)
+..+... .+|+++=+|-...... . .......|..+....+|++.+. .+++|+|||.|+.+.+++...+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3445444 6888887664322111 1 1234566677777777888754 6899999999999999998764
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=89.52 E-value=0.53 Score=49.13 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhCCc--CEEEEEeChhHHHHHHHHHhC
Q 005554 480 WSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACLW 515 (691)
Q Consensus 480 ~a~dl~~ll~~l~~~--~v~lvGhS~GG~ial~~A~~~ 515 (691)
..+.|..+++..... ++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345566666665543 489999999999999988653
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.71 Score=49.89 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhCCcCEEEEEeChhHHHHHHHHH
Q 005554 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513 (691)
Q Consensus 477 ~~~~a~dl~~ll~~l~~~~v~lvGhS~GG~ial~~A~ 513 (691)
.......+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3446667777777776678999999999999999875
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.96 E-value=1.2 Score=47.10 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhC----CcCEEEEEeChhHHHHHHHHHh
Q 005554 478 LMWSELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 478 ~~~a~dl~~ll~~l~----~~~v~lvGhS~GG~ial~~A~~ 514 (691)
+++.+.|..+++... ..++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666553 1368999999999999998854
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.68 E-value=0.81 Score=48.43 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhCC--cCEEEEEeChhHHHHHHHHHh
Q 005554 480 WSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 480 ~a~dl~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~ 514 (691)
+.+.|..+++.... ..+++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34456666666554 258999999999999998864
|
|
| >PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed | Back alignment and domain information |
|---|
Probab=87.32 E-value=4.1 Score=42.85 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=62.7
Q ss_pred CHHHHHHHhC-------CCeEEEEEECCcccccCChhHHHHHHHHHHHHHHHHHh------cCCcEEEE--E--------
Q 005554 60 HLGLVAASKY-------QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKE------QGSDLMIR--F-------- 116 (691)
Q Consensus 60 N~aL~~A~~~-------~~~~~~f~~~~~~~~~~~~~~~~fl~~~l~~l~~~l~~------~g~~l~~~--~-------- 116 (691)
+.|+.+|++. ..|..+++.++.........-..---+-+.+..+.+++ .|++.... .
T Consensus 19 ~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~~~~~~~~~eelle~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~ 98 (357)
T PRK12652 19 RQTVAYAVESAEEAAETPTVHLVAAASGRAVDPEGQDELAAAEELLERVEVWATEDLGDDASSVTIETALLGTDEYLFGP 98 (357)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEEecCcccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEeccccccCC
Confidence 4567666522 26788899886432111110001111234445554444 47764443 3
Q ss_pred CChHHHHHHHHHHhCCcEEEEccccChhHHH-HHHHHHHHHhhcCC
Q 005554 117 GRVENVIRELVEEVKATSVFAEEEVEYHLRQ-MMAIVDETLAKVSL 161 (691)
Q Consensus 117 g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~-~~~~v~~~l~~~~i 161 (691)
|++.+.|.+.+++++++.|+.+.+|.|.... .-+-+...|.+.|+
T Consensus 99 G~pae~Iv~~Aee~~aDLIVm~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
T PRK12652 99 GDYAEVLIAYAEEHGIDRVVLDPEYNPGGTAPMLQPLERELARAGI 144 (357)
T ss_pred CCHHHHHHHHHHHcCCCEEEECCCCCCCCCCcccchHHHHHHhcCC
Confidence 8999999999999999999999999876433 33456666776665
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=87.06 E-value=3.8 Score=45.11 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=54.9
Q ss_pred HHHHhcCCCEEEEeCCCCCcCCCC---CCcCCCH-----------HHHHHHHHHHHHHh-C--CcCEEEEEeChhHHHHH
Q 005554 447 IYDIADGGNRVWAITLLGFGRSEK---PNIVYTE-----------LMWSELLRDFTVEV-V--GEPVHLIGNSIGGYFVA 509 (691)
Q Consensus 447 ~~~L~~~G~~Vi~~D~~G~G~S~~---~~~~~s~-----------~~~a~dl~~ll~~l-~--~~~v~lvGhS~GG~ial 509 (691)
...+ .+||.++.=|- ||..+.. .....+. ...+..-.++++.. + .+.-+..|.|.||.-++
T Consensus 53 ~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 53 ATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred chhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 3344 45999999997 6765532 1111222 22222333334333 2 25578999999999999
Q ss_pred HHHHhCccccceEEEecCCCC
Q 005554 510 IVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 510 ~~A~~~P~~V~~lVll~~~~~ 530 (691)
..|.+||+..++||.-+|+.+
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHhChhhcCeEEeCCchHH
Confidence 999999999999999998744
|
It also includes several bacterial homologues of unknown function. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.53 E-value=0.96 Score=48.90 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhCC--cCEEEEEeChhHHHHHHHHHh
Q 005554 479 MWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 479 ~~a~dl~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~ 514 (691)
++.+.|..+++.... ..+++.|||+||.+|+.+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344556666666543 258999999999999998865
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=86.39 E-value=1.6 Score=45.38 Aligned_cols=38 Identities=26% Similarity=0.402 Sum_probs=30.4
Q ss_pred CCcCEEEEEeChhHHHHHHHHHhCcc-----ccceEEEecCCC
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAG 529 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~P~-----~V~~lVll~~~~ 529 (691)
+..|+.|||||+|+.+...+...-.+ .|+.+++++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 55789999999999999887655433 489999998763
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.8 Score=48.88 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=61.0
Q ss_pred CCeEEEEcCCCC---ChHHH--HHHHHHHhcCCCEEEEeCCC----CCcCCC--CCCcCCCHHHHHHHHHHH---HHHhC
Q 005554 427 GPAILLVHGFGA---FLEHY--RDNIYDIADGGNRVWAITLL----GFGRSE--KPNIVYTELMWSELLRDF---TVEVV 492 (691)
Q Consensus 427 ~p~VlliHG~~~---~~~~~--~~~~~~L~~~G~~Vi~~D~~----G~G~S~--~~~~~~s~~~~a~dl~~l---l~~l~ 492 (691)
-|++|+|||.+. +...+ ......+..+..-|+.+.+| |+.... ...+.+.+.|+...+.-+ |...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 589999999753 22222 12222233334556666655 332221 224566666665544444 55556
Q ss_pred C--cCEEEEEeChhHHHHHHHHHh--CccccceEEEecCCC
Q 005554 493 G--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAG 529 (691)
Q Consensus 493 ~--~~v~lvGhS~GG~ial~~A~~--~P~~V~~lVll~~~~ 529 (691)
. +++.|+|||.||..+..+... ...++.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 5 569999999999998776653 124577777777753
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=85.34 E-value=1.2 Score=48.40 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCC-----cCEEEEEeChhHHHHHHHHHh
Q 005554 479 MWSELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 479 ~~a~dl~~ll~~l~~-----~~v~lvGhS~GG~ial~~A~~ 514 (691)
++.+.|..+++.... .++++.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344556666665532 479999999999999998853
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=85.05 E-value=1.6 Score=33.05 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=18.6
Q ss_pred EEEEEcCeEEEEEEe--CC-------CCCeEEEEcCCCCChHHH
Q 005554 409 RIWRWNGYQIQYTVA--GK-------EGPAILLVHGFGAFLEHY 443 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~--g~-------~~p~VlliHG~~~~~~~~ 443 (691)
...+-||+-|....- +. .+|+|+|.||+.+++..|
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 344447776665433 22 268999999999999887
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=84.72 E-value=1.3 Score=47.94 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCC----cCEEEEEeChhHHHHHHHHHh
Q 005554 479 MWSELLRDFTVEVVG----EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 479 ~~a~dl~~ll~~l~~----~~v~lvGhS~GG~ial~~A~~ 514 (691)
+..++|..+++.+.. .++++.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345666777765532 358999999999999998854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=84.41 E-value=1.4 Score=47.82 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhC----C--cCEEEEEeChhHHHHHHHHHh
Q 005554 479 MWSELLRDFTVEVV----G--EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 479 ~~a~dl~~ll~~l~----~--~~v~lvGhS~GG~ial~~A~~ 514 (691)
++.+.|..+++... . -++++.|||+||.+|+..|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556666666552 1 359999999999999988853
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=84.07 E-value=1.4 Score=47.62 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCC-----cCEEEEEeChhHHHHHHHHHh
Q 005554 480 WSELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 480 ~a~dl~~ll~~l~~-----~~v~lvGhS~GG~ial~~A~~ 514 (691)
+.+.|..+++.... .++++.|||+||.+|+.+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555566655532 368999999999999998854
|
|
| >TIGR00591 phr2 photolyase PhrII | Back alignment and domain information |
|---|
Probab=84.06 E-value=0.43 Score=52.46 Aligned_cols=57 Identities=12% Similarity=0.019 Sum_probs=47.1
Q ss_pred hhhhcccchhhhhhHHhhhccccccccCCCCCCcccccCCcceeccCCCeeecCchHHHHHHHHH
Q 005554 240 WTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAY 304 (691)
Q Consensus 240 ~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~f 304 (691)
|..+||++|+++|++|++ ..+..|..+||.|... .+|.+|+.+..|+..+++.+.+.
T Consensus 221 ~~~gGe~aA~~~L~~F~~-~~l~~Y~~~Rn~p~~~-------~tS~LSPyL~~G~IS~R~i~~~~ 277 (454)
T TIGR00591 221 WAKPGTTAGLIMLESFIE-KRLCFFRTRRNDPNND-------ALSMLSPWLHFGQLSAQRAARAV 277 (454)
T ss_pred CCCCcHHHHHHHHHHHHH-HHHHHHHHhcCCcccc-------cccccchHHhcCcccHHHHHHHH
Confidence 546799999999999997 4788899999987653 67888888888888888877775
|
All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=84.04 E-value=0.37 Score=51.74 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=41.7
Q ss_pred hhcccchhhhhhHHhhhccccccccCCCCCCcccccCCcceeccCCCeeecCchHHHHHHHHHHHhhcCCCCCchHHHHH
Q 005554 242 LINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQE 321 (691)
Q Consensus 242 ~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~ 321 (691)
.+||++|+.+|++|+.+. +.+|..+||+|+.+ .+| +|+.||.+|+.+....|.+.+.
T Consensus 197 ~~Ge~aA~~~l~~F~~~~-l~~Y~~~Rd~p~~~-------~TS---------------~LSpyL~~G~IS~r~v~~~~~~ 253 (461)
T COG0415 197 TGGEKAALARLQDFLAEG-LDDYERTRDFPALD-------GTS---------------RLSPYLAFGVISPREVYAALLA 253 (461)
T ss_pred CchHHHHHHHHHHHHHHH-HHHHHHhcCCcccc-------ccc---------------ccCHHHHcCCcCHHHHHHHHHH
Confidence 459999999999999744 89999999988765 333 5556666665555556666654
|
|
| >TIGR00289 conserved hypothetical protein TIGR00289 | Back alignment and domain information |
|---|
Probab=81.23 E-value=9.3 Score=37.21 Aligned_cols=91 Identities=13% Similarity=0.020 Sum_probs=59.2
Q ss_pred HHHHHHHhCCCeEEEEEECCcccccCChhHHHHHHHHHHHHHHHHHhcCCcEEEEE--CC---hHHHHHHHHHHhCCcEE
Q 005554 61 LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF--GR---VENVIRELVEEVKATSV 135 (691)
Q Consensus 61 ~aL~~A~~~~~~~~~f~~~~~~~~~~~~~~~~fl~~~l~~l~~~l~~~g~~l~~~~--g~---~~~~l~~l~~~~~~~~v 135 (691)
-||+.|.+...|..++..-|.... +..|=...+..++.+.+.+|+||+... |. -.+.+.+.+++.++++|
T Consensus 15 lAl~~~~~~~~V~~L~~~~~~~~~-----s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~~~gv~~v 89 (222)
T TIGR00289 15 LALYKALEEHEVISLVGVFSENEE-----SYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLGELDVEAL 89 (222)
T ss_pred HHHHHHHHcCeeEEEEEEcCCCCC-----ccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHHHcCCCEE
Confidence 467777655457777777665321 121222356667777788899998764 33 33445455567799999
Q ss_pred EEccccChhHHHHHHHHHHHH
Q 005554 136 FAEEEVEYHLRQMMAIVDETL 156 (691)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~l 156 (691)
++-.-...+.+.|.+++.+.+
T Consensus 90 v~GdI~s~~qr~~~e~vc~~~ 110 (222)
T TIGR00289 90 CIGAIESNYQKSRIDKVCREL 110 (222)
T ss_pred EECccccHHHHHHHHHHHHHc
Confidence 998888888888776665544
|
Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=81.00 E-value=2.5 Score=46.61 Aligned_cols=24 Identities=21% Similarity=0.447 Sum_probs=19.7
Q ss_pred hCCcCEEEEEeChhHHHHHHHHHh
Q 005554 491 VVGEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 491 l~~~~v~lvGhS~GG~ial~~A~~ 514 (691)
...-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 333479999999999999998765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 691 | ||||
| 2vtb_B | 525 | Structure Of Cryptochrome 3 - Dna Complex Length = | 6e-14 | ||
| 2ijg_X | 526 | Crystal Structure Of Cryptochrome 3 From Arabidopsi | 6e-14 | ||
| 2j4d_A | 525 | Cryptochrome 3 From Arabidopsis Thaliana Length = 5 | 7e-14 | ||
| 1j1i_A | 296 | Crystal Structure Of A His-Tagged Serine Hydrolase | 1e-07 | ||
| 1np7_A | 489 | Crystal Structure Analysis Of Synechocystis Sp. Pcc | 2e-07 | ||
| 1tez_A | 474 | Complex Between Dna And The Dna Photolyase From Ana | 6e-06 | ||
| 1owl_A | 484 | Structure Of Apophotolyase From Anacystis Nidulans | 7e-06 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 2e-05 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 2e-05 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 2e-05 | ||
| 3qit_A | 286 | Thioesterase Domain From Curacin Biosynthetic Pathw | 7e-05 | ||
| 1cqz_A | 554 | Crystal Structure Of Murine Soluble Epoxide Hydrola | 8e-05 | ||
| 2e0i_A | 440 | Crystal Structure Of Archaeal Photolyase From Sulfo | 8e-05 | ||
| 1dnp_A | 471 | Structure Of Deoxyribodipyrimidine Photolyase Lengt | 2e-04 | ||
| 3fy4_A | 537 | (6-4) Photolyase Crystal Structure Length = 537 | 2e-04 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 4e-04 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 5e-04 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 8e-04 |
| >pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex Length = 525 | Back alignment and structure |
|
| >pdb|2IJG|X Chain X, Crystal Structure Of Cryptochrome 3 From Arabidopsis Thaliana Length = 526 | Back alignment and structure |
|
| >pdb|2J4D|A Chain A, Cryptochrome 3 From Arabidopsis Thaliana Length = 525 | Back alignment and structure |
|
| >pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase Involved In The Carbazole Degradation (Carc Enzyme) Length = 296 | Back alignment and structure |
|
| >pdb|1NP7|A Chain A, Crystal Structure Analysis Of Synechocystis Sp. Pcc6803 Cryptochrome Length = 489 | Back alignment and structure |
|
| >pdb|1TEZ|A Chain A, Complex Between Dna And The Dna Photolyase From Anacystis Nidulans Length = 474 | Back alignment and structure |
|
| >pdb|1OWL|A Chain A, Structure Of Apophotolyase From Anacystis Nidulans Length = 484 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway Length = 286 | Back alignment and structure |
|
| >pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase. Length = 554 | Back alignment and structure |
|
| >pdb|2E0I|A Chain A, Crystal Structure Of Archaeal Photolyase From Sulfolobus Tokodaii With Two Fad Molecules: Implication Of A Novel Light-Harvesting Cofactor Length = 440 | Back alignment and structure |
|
| >pdb|1DNP|A Chain A, Structure Of Deoxyribodipyrimidine Photolyase Length = 471 | Back alignment and structure |
|
| >pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure Length = 537 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 691 | |||
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 4e-45 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 7e-38 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 2e-33 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 8e-33 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 2e-32 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 8e-32 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 2e-31 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 4e-30 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 1e-26 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 2e-26 | |
| 2j4d_A | 525 | Cryptochrome 3, cryptochrome DASH; DNA-binding pro | 8e-26 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 2e-25 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 1e-24 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 2e-24 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 5e-24 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 6e-24 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 8e-24 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 1e-23 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 2e-23 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 7e-23 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 9e-23 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 2e-22 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 7e-22 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 2e-21 | |
| 1np7_A | 489 | DNA photolyase; protein with FAD cofactor; HET: DN | 5e-21 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 6e-21 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 6e-21 | |
| 2j07_A | 420 | Deoxyribodipyrimidine photo-lyase; flavoprotein, n | 8e-21 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 1e-20 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 1e-20 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 1e-20 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 2e-20 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 2e-20 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 2e-20 | |
| 2e0i_A | 440 | 432AA long hypothetical deoxyribodipyrimidine PHO; | 5e-20 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 6e-20 | |
| 2wq7_A | 543 | RE11660P; lyase-DNA complex, DNA repair, DNA lesio | 8e-20 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 1e-19 | |
| 1owl_A | 484 | Photolyase, deoxyribodipyrimidine photolyase; DNA | 2e-19 | |
| 3fy4_A | 537 | 6-4 photolyase; DNA repair, clock cryptochrome; HE | 2e-19 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 3e-19 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 5e-19 | |
| 3tvs_A | 538 | Cryptochrome-1; circadian clock light entrainment, | 6e-19 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 9e-19 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 9e-19 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 2e-18 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 2e-18 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 2e-18 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 3e-18 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 4e-18 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 5e-18 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 5e-18 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 6e-18 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 9e-18 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 1e-17 | |
| 1u3d_A | 509 | Cryptochrome 1 apoprotein; photolyase, AMPPNP, sig | 2e-17 | |
| 1dnp_A | 471 | DNA photolyase; DNA repair, electron transfer, exc | 2e-17 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 5e-17 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 5e-17 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 6e-17 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 1e-16 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 2e-16 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 5e-16 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 1e-15 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 1e-15 | |
| 2xry_A | 482 | Deoxyribodipyrimidine photolyase; DNA damage, DNA | 1e-15 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 2e-15 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 2e-15 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 4e-15 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 1e-14 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 1e-14 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 2e-14 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 6e-14 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 1e-13 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 2e-13 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 4e-13 | |
| 3umv_A | 506 | Deoxyribodipyrimidine photo-lyase; CPD cyclobutane | 9e-13 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 5e-12 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 9e-12 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 2e-11 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 3e-10 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 3e-09 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 3e-09 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 8e-09 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 1e-08 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 4e-08 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 2e-07 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 7e-07 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 2e-06 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 3e-06 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 4e-06 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 5e-06 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 1e-05 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 1e-05 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 6e-05 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 1e-04 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 4e-04 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 4e-04 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 5e-04 |
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 4e-45
Identities = 63/295 (21%), Positives = 112/295 (37%), Gaps = 31/295 (10%)
Query: 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE---HYRDNIYDIADGGNRVWAITL 462
Y R G + +Y AG +G ++L+HG GA E ++R+ I +A RV A+ +
Sbjct: 16 YVERFVNAGGVETRYLEAG-KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDM 73
Query: 463 LGFGRSEKPNIVYTELMWSELLRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
LGFG++ KP+I YT+ L DF + V ++GNS+GG V+ L +V +
Sbjct: 74 LGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNA 133
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+VL+ SAG E + + + + D
Sbjct: 134 LVLMGSAG----------LVVEIHEDLRPIINYDFTREGMVHLVKALTN-----DGFKID 178
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYL----LEGFKEKVLIIQGIKDPISDS 637
D +I+ + D + + + + + L++QG D +
Sbjct: 179 DAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV 238
Query: 638 KSKVAMFKEHCAG---IVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKVPAES 689
++ F + +I GH E PE+ + ++ PA +
Sbjct: 239 ETA-YKFLDLIDDSWGYIIP--HCGHWAMIEHPEDFANATLSFLSLRVDITPAAA 290
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 7e-38
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 31/282 (10%)
Query: 409 RIWRWNGYQIQYTVAGKEGPAILLVHGFGA---FLEHYRDNIYDIADGGNRVWAITLLGF 465
+ G Y G EG ++L+HG G ++R I ++ RV A ++GF
Sbjct: 8 KSILAAGVLTNYHDVG-EGQPVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGF 65
Query: 466 GRSEKP-NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
G +++P N Y++ W + + + E H++GN+ GG A + V +VL
Sbjct: 66 GFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVL 125
Query: 525 INSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
+ +AG + G + +R + F R D L
Sbjct: 126 MGAAG----------TRFDVTEGLNAVWGYTPSIENMRNLLDIFA-----YDRSLVTDEL 170
Query: 585 ISEMLRASYDPGVLVVLESIFS------FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638
AS PG S+F + ++ + LII G +D +
Sbjct: 171 ARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLS 230
Query: 639 SKVAMFKE--HCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
S + + + V GH E+ + N ++ E+
Sbjct: 231 SSLRLGELIDRAQLHVFG--RCGHWTQIEQTDRFNRLVVEFF 270
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-33
Identities = 44/279 (15%), Positives = 92/279 (32%), Gaps = 20/279 (7%)
Query: 412 RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGN-RVWAITLLGFGRSEK 470
I Y G G I+ +HG + +++ G + + L G G S+
Sbjct: 7 YLTRSNISYFSIG-SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDP 65
Query: 471 PNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
+ ++ + L+ E++G L G+S GGY +A V L
Sbjct: 66 ISPSTSDNVLETLIEAI-EEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVI 124
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW--LISE 587
S L + + ++F+ + D+ LI
Sbjct: 125 -------TADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIP 177
Query: 588 MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE- 646
L+ D + L++ +SF L + ++ I+ G D + + ++ +
Sbjct: 178 GLQKE-DKTFIDQLQNNYSFTFEEKLKNI--NYQFPFKIMVGRNDQVVGYQEQLKLINHN 234
Query: 647 -HCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESK 684
+ +++ GH ++ E V ++ + S
Sbjct: 235 ENGEIVLLN--RTGHNLMIDQREAVGFHFDLFLDELNSN 271
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 8e-33
Identities = 54/281 (19%), Positives = 98/281 (34%), Gaps = 33/281 (11%)
Query: 415 GYQIQYTVAGK-EGPAILLVHGFGAFLEH---YRDNIYDIADGGNRVWAITLLGFGRSEK 470
++ Y AG ++L+HG G + NI +A V A+ G+G S+K
Sbjct: 23 PLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHF-HVLAVDQPGYGHSDK 81
Query: 471 P-NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
+ L+ + +G V L+GN++GG A +PA +VL+
Sbjct: 82 RAEHGQFNRYAAMALKGL-FDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPG 140
Query: 529 GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL---RLNISNFVKQCYPTRRERADDWLI 585
G S A P +L F + R N+ F++ + L+
Sbjct: 141 G----------LSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMV-YDKNLITPELV 189
Query: 586 SEMLRASYDPGVLVVLESIFSFKLSLPLNYL-----LEGFKEKVLIIQGIKDPISDSKSK 640
+ + P L ++ + ++ VL+I G +D ++
Sbjct: 190 DQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDG- 248
Query: 641 VAMFKEHCAG---IVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ + V GH EK +E N + E++
Sbjct: 249 ALVALKTIPRAQLHVFG--QCGHWVQVEKFDEFNKLTIEFL 287
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-32
Identities = 49/287 (17%), Positives = 97/287 (33%), Gaps = 34/287 (11%)
Query: 408 TRIWRWNGYQIQYTVAGKEGPAILLVHGFGAF---LEHYRDNIYDIADGGNRVWAITLLG 464
++ + I Y AG G ++++HG G +Y N+ D G RV G
Sbjct: 15 INEKGFSDFNIHYNEAG-NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPG 73
Query: 465 FGRSEKP-NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSV 522
F +S+ L+ + ++ ++ + + HL+GN++GG A +P + +
Sbjct: 74 FNKSDAVVMDEQRGLVNARAVKGL-MDALDIDRAHLVGNAMGGATALNFALEYPDRIGKL 132
Query: 523 VLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK--QCYPTRRERA 580
+L+ G A P+ L Y + + Q + +
Sbjct: 133 ILMGPGG----------LGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182
Query: 581 DDWLISEMLRASYD-PGVL--VVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PI 634
+ L+ A P L ++ + + + + L K K I G D P+
Sbjct: 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL 242
Query: 635 SDSKSKVAMFKEHCAG---IVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ V G E +E N ++ +++
Sbjct: 243 DHGL----KLLWNIDDARLHVFS--KCGAWAQWEHADEFNRLVIDFL 283
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 8e-32
Identities = 54/279 (19%), Positives = 99/279 (35%), Gaps = 29/279 (10%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLE---HYRDNIYDIADGGNRVWAITLLGFGRSEK 470
+I + G+ ++L+HG G ++ NI + + G RV + G+G+S+
Sbjct: 23 KTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDS 82
Query: 471 P-NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
N + + +L+ V+ + +HL+GNS+GG+ WP V +VL+
Sbjct: 83 VVNSGSRSDLNARILKSV-VDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGG 141
Query: 529 GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM 588
+ ++ + +L Q + L+L + FV D L
Sbjct: 142 TGGMSLFTPMP---TEGIKRLNQLYRQPTIENLKLMMDIFV-----FDTSDLTDALFEAR 193
Query: 589 LRASYD-PGVLVVLESIFSFKLSLPLNY--LLEGFKEKVLIIQGIKD---PISDSKSKVA 642
L L ++ L K + LI+ G D P+
Sbjct: 194 LNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGL---- 249
Query: 643 MFKEHCAG---IVIRELDAGHCPHDEKPEEVNSIISEWI 678
AG + R D GH E + N ++ ++
Sbjct: 250 RLLSGIAGSELHIFR--DCGHWAQWEHADAFNQLVLNFL 286
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 31/282 (10%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSE 469
VAG + PA++L+HG G ++R I D+A+ V A L+GFG+SE
Sbjct: 15 GTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENF-FVVAPDLIGFGQSE 73
Query: 470 KP-----NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAI-VACLWPAVVKSV 522
P +I+ M E + + G E H++GNS+GG V + + P V
Sbjct: 74 YPETYPGHIMSWVGMRVEQILGL-MNHFGIEKSHIVGNSMGGA-VTLQLVVEAPERFDKV 131
Query: 523 VLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADD 582
L+ S G E +L R I +FV Y +
Sbjct: 132 ALMGSVG-----APMNARPPELARLLAFYADPRLTP--YRELIHSFV---YDPENFPGME 181
Query: 583 WLISEMLRASYDPGVLVVLESIF-SFKLSLPLNYL----LEGFKEKVLIIQGIKDPISDS 637
++ + DP V + E +F S K + + L VL+ G +D I
Sbjct: 182 EIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL 241
Query: 638 KSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+H + L GH E+ + + ++ E
Sbjct: 242 -DTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHF 282
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-30
Identities = 53/286 (18%), Positives = 98/286 (34%), Gaps = 25/286 (8%)
Query: 414 NGYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
+ Y + G ILL+HG + I +AD G RV A+ +GF +S K
Sbjct: 30 QPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSK 89
Query: 471 P-NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
P + Y+ + +E +G +IG+S+GG A L+P V+ +VL+N
Sbjct: 90 PAHYQYSFQQLAANTHAL-LERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI 148
Query: 529 GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM 588
G + ++ L R + + + + +R
Sbjct: 149 G--LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMY 206
Query: 589 LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSKSKVAMFK 645
+ + + P+ Y L+ + L++ G KD D+ +
Sbjct: 207 RGKGRESVAWNSALTYDMI-FTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKAR 265
Query: 646 EHCAGIVIREL-------------DAGHCPHDEKPEEVNSIISEWI 678
+ ++ D GH P + PE + + E +
Sbjct: 266 LGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGL 311
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 34/264 (12%), Positives = 73/264 (27%), Gaps = 16/264 (6%)
Query: 420 YTVAGKEGPAILLVHGFGAF--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYT 476
YT + P + + G G F +++ + I + D + I G S N
Sbjct: 34 YTCHREGNPCFVFLSGAGFFSTADNFANIIDKLPDS-IGILTIDAPNSGYSPVSNQANVG 92
Query: 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYS 536
W + + L +SIGG+ + + + +I
Sbjct: 93 LRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAG 152
Query: 537 FLQ--FSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYD 594
F + ++ A L + L+ S+F Q + W + + +
Sbjct: 153 FSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQ------QFKQLWRGYDYCQRQLN 206
Query: 595 PGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIR 654
V + + L K ++ + +H +I
Sbjct: 207 D-VQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFR--EKEYLESEYLNKHTQTKLI- 262
Query: 655 ELDAGHCPHDEKPEEVNSIISEWI 678
H H + + + + +
Sbjct: 263 LCGQHHYLHWSETNSILEKVEQLL 286
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 30/287 (10%)
Query: 403 EGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITL 462
+ +R + G GP +L HG + + + ++D A+
Sbjct: 45 SDHFISRRVDIGRITLNVREKG-SGPLMLFFHGITSNSAVFEPLMIRLSDRF-TTIAVDQ 102
Query: 463 LGFGRSEKPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKS 521
G G S+KP Y +++ + + + L+G+S+G A +P +V+S
Sbjct: 103 RGHGLSDKPETGYEANDYADDIAGL-IRTLARGHAILVGHSLGARNSVTAAAKYPDLVRS 161
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
VV I+ P + + + R RA+
Sbjct: 162 VVAIDFT----PYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAE 217
Query: 582 DWL--ISEMLRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQGIKD 632
+ LR + ++ P VLI++G
Sbjct: 218 SGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKP-----------VLIVRGESS 266
Query: 633 PISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ S + +A + + + A H ++ PE I+ +I
Sbjct: 267 KLV-SAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITNFI 312
|
| >2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B* Length = 525 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 8e-26
Identities = 77/360 (21%), Positives = 134/360 (37%), Gaps = 97/360 (26%)
Query: 33 SPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRYSNEML 91
P++++ + G ++WF+ DLRV D+ L A ++P+Y D R+
Sbjct: 28 LPSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNF 87
Query: 92 ELV--------IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEY 143
+ L DLRK+L ++G +L+IR G+ E ++ L ++ A +VFA +E
Sbjct: 88 PKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCS 147
Query: 144 HLRQMMAIVDETLA------KVSLVDGKPKICL---WQTPFYDIKNLNDLPVSHNEFRK- 193
+ +V++ L K+ L+ G + PF ++ DLP + +FRK
Sbjct: 148 EEVDVERLVNQGLKRVGNSTKLELIWGS---TMYHKDDLPF----DVFDLPDVYTQFRKS 200
Query: 194 -LQRPLTSPIL--PPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAET 250
+ P +L DWG +PT ++L V +
Sbjct: 201 VEAKCSIRSSTRIPLSLGPTPSVDDWGDVPTLEKL--GVEPQEVTRGMRFV--------- 249
Query: 251 ILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEG 310
GG +A + + Y
Sbjct: 250 -----------------------------------------GGESAGVGRVFEYF----- 263
Query: 311 TVRDDWQELQEKLRN-AESRD---GASFATLFGPALCLGIISRRGVHYEAIKFEKERNAG 366
++ L+ E+R+ G ++T F P L G IS R ++ E ++EKER A
Sbjct: 264 -------WKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVAN 316
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 47/269 (17%), Positives = 88/269 (32%), Gaps = 21/269 (7%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP- 471
Q +G ++ P ++L+HG + NI D + R +A+ ++G P
Sbjct: 53 RFGQTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADWSSKY-RTYAVDIIGDKNKSIPE 111
Query: 472 NIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
N+ T ++ L D + +G E H+IG S+GG P VKS +++ A
Sbjct: 112 NVSGTRTDYANWLLDV-FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAET 170
Query: 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLR 590
+P L + F+ + + +
Sbjct: 171 FLPF--------------HHDFYKYALGLTASNGVETFLNWMMN-DQNVLHPIFVKQFKA 215
Query: 591 ASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650
+ + L + +L++ G + I D S +
Sbjct: 216 GVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPD 275
Query: 651 IVIREL-DAGHCPHDEKPEEVNSIISEWI 678
I + +AGH E+P VN + +
Sbjct: 276 IEAEVIKNAGHVLSMEQPTYVNERVMRFF 304
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 39/277 (14%), Positives = 81/277 (29%), Gaps = 23/277 (8%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+ +Y + G EGP + + H + + ++ D V+ + L G G S+
Sbjct: 11 PRGKFEYFLKG-EGPPLCVTHLYSEYNDNGNTFANPFTDH-YSVYLVNLKGCGNSDSAKN 68
Query: 474 V--YTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
Y+ + L E + G+S GG + A + +++ +A +
Sbjct: 69 DSEYSMTETIKDLEAI-REALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127
Query: 531 VIPE------YSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
Y R S L + R +S +
Sbjct: 128 KEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREW-----ALMSFYSEEK 182
Query: 585 ISEMLRASYDPGVLVVLESIFSFKLSLPLNYL--LEGFKEKVLIIQGIKDPISDSKSKVA 642
+ E L+ + + F + L+ K I G D
Sbjct: 183 LEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCE 242
Query: 643 MFKE--HCAGIVIRELDAGHCPHDEKPEEVNSIISEW 677
+ + ++ H P E+ ++ N +++
Sbjct: 243 IANLIPNATLTKFE--ESNHNPFVEEIDKFNQFVNDT 277
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-24
Identities = 45/282 (15%), Positives = 79/282 (28%), Gaps = 54/282 (19%)
Query: 414 NGYQIQYTVAG--KEGPAILLVHGFGA----------FLEHYRDNIYDIADGGNRVWAIT 461
+ + Y G K +L VHG G +LE Y +
Sbjct: 1 SNAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKYLEDYN------------CILLD 48
Query: 462 LLGFGRSEKPNIVYTELMW---SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAV 518
L G G S+ + + + V + + LIG S+GG V VA
Sbjct: 49 LKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPN 108
Query: 519 VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRE 578
V+ VV ++ + Y +N++ +C
Sbjct: 109 VRKVVSLSGGARFDKLDKDF-----------------MEKIYHNQLDNNYLLECIGGIDN 151
Query: 579 RADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638
+ E L D ++ L + L L+ V I + ++ +
Sbjct: 152 PLSEKYF-ETLEKDPD-IMINDLIACKLIDLV----DNLKNIDIPVKAIVAKDELLTLVE 205
Query: 639 SKVAMFKE--HCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ KE + + H + V I +I
Sbjct: 206 YSEIIKKEVENSELKIFE--TGKHFLLVVNAKGVAEEIKNFI 245
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 5e-24
Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 13/267 (4%)
Query: 416 YQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIV 474
Y+ ++ +HGF + Y ++I D V I L G G + +
Sbjct: 6 YKFYEANVE-TNQVLVFLHGFLSDSRTYHNHIEKFTDNY-HVITIDLPGHGEDQSSMDET 63
Query: 475 YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPE 534
+ + LL + + + L G S+GG A + +++L +++ + E
Sbjct: 64 WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEE 123
Query: 535 YSFLQ--FSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRAS 592
+ L+ ++ +A G +L ++ + Q + + L S
Sbjct: 124 ANQLERRLVDDARAKVLDIAGIEL---FVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQS 180
Query: 593 YDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV 652
+ L + ++ L L+ K LI+ G D +K
Sbjct: 181 PH-KMAKALRDYGTGQMP-NLWPRLKEIKVPTLILAGEYDEKFVQIAKK--MANLIPNSK 236
Query: 653 IREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + GH H E +E +++I ++
Sbjct: 237 CKLISATGHTIHVEDSDEFDTMILGFL 263
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 16/274 (5%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
++ Y G G ++L+HG+ + ++ G RV GFG S K N
Sbjct: 11 TPIELYYEDQG-SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT 69
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW-PAVVKSVVLINSAGNVI 532
Y ++ L + V L+G S+G +A + V + + S
Sbjct: 70 GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASL---- 125
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLFYLRLN-ISNFVKQCYPTRR---ERADDWLISEM 588
+ + N + G + R ++F K Y R + ++
Sbjct: 126 EPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGS 185
Query: 589 LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEK---VLIIQGIKDPISDSKSKVAMFK 645
+ + + ++ +E + LI+ G KD I + F
Sbjct: 186 WNVAIGSAPVAAYAVVPAW--IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFH 243
Query: 646 EHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ E+ A H +EVN+ + ++
Sbjct: 244 QAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 8e-24
Identities = 50/281 (17%), Positives = 90/281 (32%), Gaps = 32/281 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+ Y G G ++L+HGF + + D G RV GFG+S +P
Sbjct: 11 TSIDLYYEDHG-TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 69
Query: 474 VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNV 531
Y ++ L +E + + L+G S G VA V+ A + V + S
Sbjct: 70 GYDYDTFAADLNTV-LETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLE-- 126
Query: 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLN-ISNFVKQCYPTRR---ERADDWLISE 587
P + + A G + R + F Y R + +
Sbjct: 127 -PFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRN 185
Query: 588 MLRASYDPGVLVVLESIFSF---------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638
+ G + ++ ++ +P LI+ G D +
Sbjct: 186 SWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-----------ALILHGTGDRTLPIE 234
Query: 639 SKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ +F + E+ A H EEVN+ + ++
Sbjct: 235 NTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-23
Identities = 48/276 (17%), Positives = 92/276 (33%), Gaps = 43/276 (15%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
NG Q+ Y G+ A+LL+ G + + ++ V A G+G S P+
Sbjct: 10 NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD 69
Query: 473 IVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
+ + +D V + V L+G S GG I A +P+ + +V+
Sbjct: 70 RDFPADFFERDAKD----AVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIW 125
Query: 526 NSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLI 585
+ V E + IR ++ + + + + E+ D I
Sbjct: 126 GANAYVTDE--------DSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDG-I 176
Query: 586 SEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK 645
+ +L + P LI+ G KDP+ +
Sbjct: 177 RQFKHLPDGNICRHLLPRV-----QCP-----------ALIVHGEKDPLVPRFHADFIH- 219
Query: 646 EHCAG---IVIRELDAGHCPHDEKPEEVNSIISEWI 678
+H G ++ + H H +E N + +++
Sbjct: 220 KHVKGSRLHLMP--EGKHNLHLRFADEFNKLAEDFL 253
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 50/279 (17%), Positives = 94/279 (33%), Gaps = 21/279 (7%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
G QI G E P +L +HG +++ +A G RV A L G GRS
Sbjct: 12 GGNQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE 71
Query: 473 IV--YTELMWSELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLIN 526
+V Y+ L V+ +P+ L+G+S+G +A + P +K ++L+
Sbjct: 72 MVTSYS---SLTFLAQ-IDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVE 127
Query: 527 SAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLIS 586
+ + Q +F ++ ++Q P+ E L
Sbjct: 128 LPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQ 187
Query: 587 EMLRA-------SYDPGVLVVLESIFSFKLSLPLNY--LLEGFKEKVLIIQGIKDPISDS 637
+ + S+D + + Y +L+ + ++ G ++
Sbjct: 188 RITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLN-R 246
Query: 638 KSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISE 676
+ K L GH H + + S+I
Sbjct: 247 PEDLQQQKMTMTQAKRVFLSGGHNLHIDAAAALASLILT 285
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 7e-23
Identities = 51/282 (18%), Positives = 94/282 (33%), Gaps = 32/282 (11%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
+G I Y G ++G ++ HG+ + + + + G RV A G GRS++P+
Sbjct: 7 DGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS 66
Query: 473 IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNV 531
+ ++ + T + IG+S GG VA VA P V VL+++ V
Sbjct: 67 TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPV 126
Query: 532 IPEYSFLQFSNERQASGPIRLG--AQLLLFYLRLNISNFVKQCYPTRR--ERADDWLISE 587
+ + + R A FY+ + F + D +
Sbjct: 127 MVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQ 186
Query: 588 MLRASYDPGVLVVLESIFSF----------KLSLPLNYLLEGFKEKVLIIQGIKDPISDS 637
+ + E I +F ++ +P VL+ G D +
Sbjct: 187 GMMGAA----NAHYECIAAFSETDFTDDLKRIDVP-----------VLVAHGTDDQVVPY 231
Query: 638 KSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
E A ++ H PE +N + ++
Sbjct: 232 ADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 9e-23
Identities = 54/280 (19%), Positives = 93/280 (33%), Gaps = 30/280 (10%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G QI Y G G I+ HG+ + + + +A G RV A G GRS +P
Sbjct: 7 DGTQIYYKDWG-SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS 65
Query: 474 VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNV 531
+++ L +E + L G S GG VA + A V LI++ +
Sbjct: 66 GNDMDTYADDLAQL-IEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 532 IP--EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEML 589
+ E + E A Y L F P + A ++
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAG--MVDWFW 182
Query: 590 RASYDPGVLVVLESIFSF----------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639
G + I +F K+ +P L++ G D + ++
Sbjct: 183 LQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVP-----------TLVVHGDADQVVPIEA 231
Query: 640 KVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
G ++ A H D +++N+ + +I
Sbjct: 232 SGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 99.9 bits (249), Expect = 2e-22
Identities = 49/288 (17%), Positives = 90/288 (31%), Gaps = 46/288 (15%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+ Y G G ++L+HGF + + D G RV GFG+S +P
Sbjct: 12 TSIDLYYEDHG-TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 70
Query: 474 VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNV 531
Y ++ L +E + + L+G S+G VA V+ A + +V + S
Sbjct: 71 GYDYDTFAADLNTV-LETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPF 129
Query: 532 I-----------PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERA 580
+ P+ F +A FY R
Sbjct: 130 LLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNL----------DENLGTRI 179
Query: 581 DDWLISEMLRASYDPGVLVVLESIFSF---------KLSLPLNYLLEGFKEKVLIIQGIK 631
+ + + G + ++ ++ +P LI+ G
Sbjct: 180 SEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-----------ALILHGTG 228
Query: 632 DPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
D ++ +F + E+ A H EEVN+ + ++
Sbjct: 229 DRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 276
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 7e-22
Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 32/280 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G QI + G G +L HG+ + + + ++ G R A GFGRS++P
Sbjct: 7 DGTQIYFKDWG-SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 474 VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNV 531
+++ + +E + + V L+G S+GG VA +A A V +VL+ +
Sbjct: 66 GNDYDTFADDIAQL-IEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV--- 121
Query: 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLN-ISNFVKQCY-PTRRERADDWLISEML 589
+ + + + L R IS+F Y + + + ++ L
Sbjct: 122 -TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTL 180
Query: 590 RASYDPGVLVVLESIFSF----------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639
+ + + ++ + +F K+ +P L+I G D I ++
Sbjct: 181 QIALLASLKATVDCVTAFAETDFRPDMAKIDVP-----------TLVIHGDGDQIVPFET 229
Query: 640 KVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ E G ++ DA H +++N + ++
Sbjct: 230 TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 55/296 (18%), Positives = 99/296 (33%), Gaps = 24/296 (8%)
Query: 401 SNEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAI 460
S+E ++ R G I Y G G +L +HG +R+ I + G R A
Sbjct: 4 SSEFPFAKRTVEVEGATIAYVDEG-SGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAP 62
Query: 461 TLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVK 520
L+G G S KP+I Y + F + + + L+ + G A L P V
Sbjct: 63 DLIGMGDSAKPDIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVA 122
Query: 521 SVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL----LFYLRLNISNFVKQCYP-- 574
+V + + V P + GP+ + L N FV+ P
Sbjct: 123 AVAFMEAL--VPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNF--FVETILPEM 178
Query: 575 -TRRERADDWL---ISEMLRASYDPGVL-----VVLESIFSFKLSLPLNYLLEGFKEKV- 624
R ++ + + L V + +F + L +
Sbjct: 179 GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIP 238
Query: 625 -LIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
L+ ++ K V E+ + +R + H ++ P + I++W+
Sbjct: 239 KLLFHAEPGALAP-KPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADWL 293
|
| >1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1 Length = 489 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 5e-21
Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 37/223 (16%)
Query: 44 SGSAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRYSNEMLELVIF------ 96
+ ++WF+ DLR+ DH L A K A+ +Y +D R ++ + +
Sbjct: 5 PPTVLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQ 64
Query: 97 -ALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDET 155
++++L +SL++ G+ L++ G E VI ++ +++ A +++ EV + + +
Sbjct: 65 QSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQ 124
Query: 156 LAK----VSLVDGKPKICLWQ---------------TPFYDIKNLNDLPVSHNEFRKLQR 196
L G L T F K++ + R
Sbjct: 125 LTILGIEAKGYWGS---TLCHPEDLPFSIQDLPDLFTKFR--KDIEKKKI---SIRPCFF 176
Query: 197 PLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEES 239
+ + P + P + V ++ E+
Sbjct: 177 APSQLLPSPNIKLELTAPPPEFFPQINFDHRSV--LAFQGGET 217
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 6e-21
Identities = 48/286 (16%), Positives = 89/286 (31%), Gaps = 33/286 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
G ++ Y G G IL HG +R+ + A G R+ A L+G G S+K +
Sbjct: 17 KGRRMAYIDEG-TGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKLDP 74
Query: 474 V----YTELMWSELLRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
Y + L + +G+ V L+ + G A V+ + + +
Sbjct: 75 SGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAI 134
Query: 529 GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM 588
I F + Q + L L + FV+Q P R L
Sbjct: 135 AMPIEWADFPE-----QDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILR---PLSEAE 186
Query: 589 LRASYDP---------GVLVVLESIFSFKLSLPLNYLLEGFKE-------KVLIIQGIKD 632
+ A +P L I + + + L I
Sbjct: 187 MAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPG 246
Query: 633 PISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
++ + + F + H ++ P+E+ + I+ ++
Sbjct: 247 ALTTGR--MRDFCRTWPNQTEITVAGAHFIQEDSPDEIGAAIAAFV 290
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 6e-21
Identities = 42/282 (14%), Positives = 91/282 (32%), Gaps = 33/282 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G +I Y G +G ++ +HG+ + ++D + + D G R A G G S
Sbjct: 7 DGVEIFYKDWG-QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD 65
Query: 474 VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLW-PAVVKSVVLINS-AGN 530
Y +++ L D + + V L+ +S+GG +A ++S VL+++
Sbjct: 66 GYDFDTFADDLNDL-LTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRR--ERADDWLISEM 588
+I + + + F P + + D
Sbjct: 125 MIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMA 184
Query: 589 LRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641
+ + G + +++ K +P L++ G D + +
Sbjct: 185 MAQT-IEGGVRCVDAFGYTDFTEDLKKFDIP-----------TLVVHGDDDQVVPIDATG 232
Query: 642 AMFKEHCAG---IVIRELDAGHCPH--DEKPEEVNSIISEWI 678
+ V + H E+ N + E++
Sbjct: 233 RKSAQIIPNAELKVYE--GSSHGIAMVPGDKEKFNRDLLEFL 272
|
| >2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A* Length = 420 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 8e-21
Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 36/205 (17%)
Query: 47 AVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLK 106
++W + DLR+ DH L+ A VV L V D L + + LR++ +
Sbjct: 4 LLVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNNLKTTPRR-RAWFLENVRALREAYR 62
Query: 107 EQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLA-KVSLV--- 162
+G L + G + E +KA +V+A + R V E L + L+
Sbjct: 63 ARGGALWVLEGLPWEKVPEAARRLKAKAVYALTSHTPYGRYRDGRVREALPVPLHLLPAP 122
Query: 163 ------DGKP-KICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEAD 215
+ ++ TPF +R PL P P
Sbjct: 123 HLLPPDLPRAYRVY---TPFS------------RLYRGAAPPLPPPEALPKGPEEGEIPR 167
Query: 216 WGPLPTFDE---------LKEFVNE 231
P E L+ F+
Sbjct: 168 EDPGLPLPEPGEEAALAGLRAFLEA 192
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 1e-20
Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 40/285 (14%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+I Y G G ++L+HG+ + + + + G RV GFG+S +P
Sbjct: 15 APIEIYYEDHG-TGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWE 73
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNVI 532
Y ++ L ++ + V L+G S+GG VA ++ ++ VV + +
Sbjct: 74 GYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYL 133
Query: 533 ------PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYP--TRRERADDWL 584
PE + + E SG I +L F E +
Sbjct: 134 YKSEDHPEGALDDATIETFKSGVINDRLA----FLDEFTKGFFAAGDRTDLVSESFRLYN 189
Query: 585 ISEMLRASYDPGVLVVLESIFSF----------KLSLPLNYLLEGFKEKVLIIQGIKDPI 634
AS L+ I +F K ++P LII G D
Sbjct: 190 WDIAAGAS----PKGTLDCITAFSKTDFRKDLEKFNIP-----------TLIIHGDSDAT 234
Query: 635 SDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + E + + H + +E N + ++
Sbjct: 235 VPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFL 279
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 1e-20
Identities = 45/287 (15%), Positives = 95/287 (33%), Gaps = 19/287 (6%)
Query: 406 YSTRIWRWNGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLG 464
+ I Y + A++ +HG +R + I R L+G
Sbjct: 21 ARCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIG 79
Query: 465 FGRSEKP-NIVYTELMWSELLRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSV 522
G+S K N Y L + L + + + + + +G+ G A +K++
Sbjct: 80 MGKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAI 139
Query: 523 VLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD- 581
V + S +VI + E A G +++L + + + E +
Sbjct: 140 VHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVL-ENNFFVETVLPSKIMRKLEPEEF 198
Query: 582 -----DWLISEMLRASYD--PGVLVVLESIFSFKLSLPLNY--LLEGFKEK-VLIIQGIK 631
+ +R P + +++ + + NY L + L I+
Sbjct: 199 AAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIES-- 256
Query: 632 DPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
DP S + V + ++ H ++ P+E+ I ++
Sbjct: 257 DPGFFSNAIVE-GAKKFPNTEFVKVKGLHFLQEDAPDEMGKYIKSFV 302
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-20
Identities = 44/276 (15%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIV 474
Q+ + P ++LVHG ++ + +A + L G G + + +
Sbjct: 4 SNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD 63
Query: 475 YTELMWSELLRDF--TVEVVGEPVHLIGNSIGGYFVAIVACLWPA-VVKSVVLINSAGNV 531
E++ PV L+G S+GG + + I G+
Sbjct: 64 NFAEA-VEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH- 121
Query: 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY-----PTRRERADDWLIS 586
LQ + E+ A + Q + + I + + Y + LI+
Sbjct: 122 ----FGLQENEEKAA--RWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIA 175
Query: 587 EMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE 646
+ + + S L L+ K + + G +D + +
Sbjct: 176 QRSAN--LGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES 228
Query: 647 HCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIE 682
AGH H E+P+ I+ I +I
Sbjct: 229 SGLSYSQVA-QAGHNVHHEQPQAFAKIVQAMIHSII 263
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 52/293 (17%), Positives = 91/293 (31%), Gaps = 29/293 (9%)
Query: 406 YSTRIWRWNGYQIQYTVAGKEG--PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL 463
Y + + G + Y G L +HG + YR I A+ G RV A
Sbjct: 24 YLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFF 83
Query: 464 GFGRSEKP--NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
GFG+S+KP YT L + + L+ GG+ + P+ K
Sbjct: 84 GFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKR 143
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
++++N+ P + Q + L+ L + F+ +R
Sbjct: 144 LIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFM--------KRWA 195
Query: 582 DWLISEMLRA--------SYDPGV-----LVVLESIFSFKLSLPLN-YLLEGFKEKVLII 627
L A SY GV +V +S + + + +
Sbjct: 196 PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMA 255
Query: 628 QGIKDPISDSKSKVAMFKEHC--AGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
G+KD + + K + DAGH + + + +
Sbjct: 256 IGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFA 307
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 45/279 (16%), Positives = 86/279 (30%), Gaps = 26/279 (9%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
+G QI Y G ++ P I HG+ + + + G RV A G GRS +
Sbjct: 8 DGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW 67
Query: 473 IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP-AVVKSVVLINSAG-N 530
+ +++ + + + +G+S GG V P V VLI +
Sbjct: 68 DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPL 127
Query: 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLR 590
++ + G A + R + Y A + +I R
Sbjct: 128 MVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYG-YNRPGVEASEGIIGNWWR 186
Query: 591 ASYDPGVLVVLESIFSF----------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSK 640
+ I +F + P VL++ G D I ++
Sbjct: 187 QGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQP-----------VLVMHGDDDQIVPYENS 235
Query: 641 VAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + ++ H + +N+ + +I
Sbjct: 236 GVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFI 274
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 2e-20
Identities = 53/286 (18%), Positives = 95/286 (33%), Gaps = 25/286 (8%)
Query: 406 YSTRIWRWNGYQIQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL 463
Y + + G ++ Y G L +HG ++ YR + G RV A L
Sbjct: 23 YLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLF 82
Query: 464 GFGRSEKP--NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
GFGRS+KP + VYT L F + E V L+ GG + P +V
Sbjct: 83 GFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDR 142
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIR-LGAQLLLFYLRLNISNFVKQCY------P 574
++++N+A V F + R L L+ I++ Y P
Sbjct: 143 LIVMNTALAVGLSPGKG-FESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGP 201
Query: 575 TRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPI 634
+ + ++ + D + SF + + G +DP+
Sbjct: 202 EFKAGVRRFPA--IVPITPDMEGAEIGRQAMSF--------WSTQWSGPTFMAVGAQDPV 251
Query: 635 SDSKSKVAMFKEHCAGI--VIRELDAGHCPHDEKPEEVNSIISEWI 678
+ M ++ G + GH + + ++ +
Sbjct: 252 LG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296
|
| >2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii} Length = 440 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 5e-20
Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 27/207 (13%)
Query: 46 SAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRYSNEM---LELVIFALEDL 101
+ F++DLR++D+ GL A V+P+++ D R L + + +I +L +L
Sbjct: 2 DCIFIFRRDLRLEDNTGLNYALSECDRVIPVFIADPRQLINNPYKSEFAVSFMINSLLEL 61
Query: 102 RKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK--V 159
L+++GS L + FG E V+ +V A ++ E+ + + + +
Sbjct: 62 DDELRKKGSRLNVFFGEAEKVVSRFFNKVDA--IYVNEDYTPFSISRDEKIRKVCEENGI 119
Query: 160 SLVDGKPKICLWQ---------TPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGA 210
+ L T FY ++ + V E + +T
Sbjct: 120 EFKAYEDY-LLTPKSLFHHRNFTSFY--NEVSKVKVREPETMEGSFDVTDS-SMNVDFLL 175
Query: 211 KLEADWGPLPTFDE------LKEFVNE 231
+ PL L V+
Sbjct: 176 TFKKIESPLFRGGRREGLYLLHRNVDF 202
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 6e-20
Identities = 39/273 (14%), Positives = 84/273 (30%), Gaps = 25/273 (9%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
NG + Y+ +G P + L+ G+ +++ +A V G + +
Sbjct: 7 NGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARD-FHVICPDWRGHDAKQTDS 65
Query: 473 IVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVA--IVACLWPAVVKSVVLINSAG 529
+ ++ L F ++ G ++ S G + V + L A + ++I+
Sbjct: 66 GDFDSQTLAQDLLAF-IDAKGIRDFQMVSTSHGCW-VNIDVCEQLGAARLPKTIIIDWLL 123
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEM- 588
P + + + P A F+ T + L +EM
Sbjct: 124 QPHPGF----WQQLAEGQHPTEYVAGRQSFFDEWA--------ETTDNADVLNHLRNEMP 171
Query: 589 --LRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE 646
+ + + ++ L L ++ + + D + F
Sbjct: 172 WFHGEMWQRACREIEANYRTWGSPLDRMDSLP--QKPEICHIYSQPLSQDYRQLQLEFAA 229
Query: 647 HCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ R + H P E P V I E++
Sbjct: 230 GHSWFHPRHIPGRTHFPSLENPVAVAQAIREFL 262
|
| >2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A* Length = 543 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 8e-20
Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 42/245 (17%)
Query: 30 CCVSPTAAATSKGR-----SGSAVIWFKQDLRVDDHLGLVAASKYQA-------VVPLYV 77
+ + K + V WF++ LR+ D+ L V P+++
Sbjct: 9 FEKGASTSLYKKAGLMDSQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFI 68
Query: 78 FDHRILSRYSNE------MLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVK 131
D IL + + LEDL L++ S L + G+ V + + +
Sbjct: 69 LDPGILDWMQVGANRWRFLQQ----TLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWR 124
Query: 132 ATSVFAEEEVEYHLRQMMAIVDETLA----KVSLVDGKPKICLWQTPFYDIKNLND--LP 185
+ E ++E + A V + +V ++ + N P
Sbjct: 125 VEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSH---TIY--NPELVIAKNLGKAP 179
Query: 186 VSHNEFRK------LQRPLTSP---ILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKL 236
+++ +F + + L P PT ++E +K+ V
Sbjct: 180 ITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELG 239
Query: 237 EESWT 241
+
Sbjct: 240 PNKFP 244
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 1e-19
Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 13/263 (4%)
Query: 417 QIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYT 476
I + G+ ++L+HG+G E +R +++ + + L GFGRS +
Sbjct: 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFGALSL 61
Query: 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYS 536
M +E + + +G S+GG + +A P V+++V + S+
Sbjct: 62 ADM-AEAVLQQAPD----KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDE 116
Query: 537 FLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPG 596
+ + A +L R Q T R D + + + A P
Sbjct: 117 WPGIKPDVLAGFQQQLSDDQQRTVERF----LALQTMGTETARQDARALKKTVLALPMPE 172
Query: 597 VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL 656
V V+ + K ++ L L+ L + G D + + V M +
Sbjct: 173 VDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLV-PRKVVPMLDKLWPHSESYIF 230
Query: 657 -DAGHCPHDEKPEEVNSIISEWI 678
A H P P E ++
Sbjct: 231 AKAAHAPFISHPAEFCHLLVALK 253
|
| >1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A* Length = 484 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 2e-19
Identities = 43/219 (19%), Positives = 88/219 (40%), Gaps = 32/219 (14%)
Query: 44 SGSAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRY--SNEMLELVIFALED 100
+ + W ++DLR+ D++GL AA ++ L+ D +IL + + + L++
Sbjct: 2 AAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQE 61
Query: 101 LRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK-- 158
L++ ++ GS L++ G +++I +L ++++A +V+ +++E + R V L
Sbjct: 62 LQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAG 121
Query: 159 --VSLVDGKPKICLWQ---------------TPFYDIKNLNDLPVSHNEFRKLQRPLTSP 201
+ + L PF+ KN P + P
Sbjct: 122 IRAVQLWDQ---LLHSPDQILSGSGNPYSVYGPFW--KNWQAQPKP----TPVATPTELV 172
Query: 202 ILPPTLAGAKLEADWGPLPTFDELK-EFVNENPWKLEES 239
L P A LPT +L ++ P + E+
Sbjct: 173 DLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGET 211
|
| >3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana} Length = 537 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-19
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 44 SGSAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSRYSNEMLELVIF------ 96
++IWF++ LRV D+ L ASK + + P++V D + +
Sbjct: 4 GSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRI 63
Query: 97 -----ALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVE 142
+L+DL SLK+ GS L++ G V+ ++E K + E + +
Sbjct: 64 RFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTD 114
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 3e-19
Identities = 38/281 (13%), Positives = 86/281 (30%), Gaps = 23/281 (8%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
G ++ Y G +G AI+ HG +R+ + + G R+ A L+G G S+K +
Sbjct: 16 AGKRMAYIDEG-KGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSP 73
Query: 474 V----YTELMWSELLRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
Y+ + L + +G+ V L+ + G A V+ + + +
Sbjct: 74 SGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAI 133
Query: 529 GNVIP--------EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERA 580
+ F F + + + + +
Sbjct: 134 VTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSD---EEMNHYR 190
Query: 581 DDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKE---KVLIIQGIKDPISDS 637
++ R + ++ +N +E L I I
Sbjct: 191 RPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIIT- 249
Query: 638 KSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
++ + + H ++ PEE+ + I++++
Sbjct: 250 -GRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFV 289
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 5e-19
Identities = 66/339 (19%), Positives = 109/339 (32%), Gaps = 63/339 (18%)
Query: 401 SNEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAI 460
N S + V GPA+ L HGF +R I +A G RV A+
Sbjct: 232 CNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAM 291
Query: 461 TLLGFGRSEKPNIV--YTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIV 511
+ G+G S P + Y L ++ +V IG+ GG V +
Sbjct: 292 DMKGYGESSAPPEIEEYC---MEVLCKE----MVTFLDKLGLSQAVFIGHDWGGMLVWYM 344
Query: 512 ACLWPAVVKSVVLINSA-GNVIPEYSFLQFSNERQASGPIRLGAQLLLFY---------L 561
A +P V++V +N+ P S L+ L++ L
Sbjct: 345 ALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ-------LYFQEPGVAEAEL 397
Query: 562 RLNISNFVKQCYPTRRER-ADDWLISEMLRASYDPGVLVVLESIFS----------FK-- 608
N+S K + E + E + L + + FK
Sbjct: 398 EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 457
Query: 609 -LSLPLNY---------LLEGFKEK-----VLIIQGIKDPISDSKSKVAMFKEHCAGIVI 653
PLN+ + L++ KD + + M ++ +
Sbjct: 458 GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHM-EDWIPHLKR 516
Query: 654 REL-DAGHCPHDEKPEEVNSIISEWIVTIESKVPAESFL 691
+ D GH +KP EVN I+ +W+ + P S +
Sbjct: 517 GHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM 555
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 9e-19
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 414 NGYQIQYTVAG----KEGPAILLVHGFGAFLEHYRD--NIYDIADGGNRVWAITLLGFGR 467
G + + A + ++LL+HG E +++ ++ +A G R AI L G G
Sbjct: 15 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGH 74
Query: 468 SEKP--NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
S++ EL L + P +I S+ G + + + V +
Sbjct: 75 SKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPV 134
Query: 526 NSAG 529
Sbjct: 135 APIC 138
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 9e-19
Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 35/273 (12%)
Query: 416 YQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY 475
+ Q I+LVHG L++ D+ + + + + + G S + ++
Sbjct: 5 IRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVND-HNIIQVDVRNHGLSPREPVMN 63
Query: 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY 535
M ++ L D + + IG+S+GG V + L P + +V I+ A +Y
Sbjct: 64 YPAM-AQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAP---VDY 119
Query: 536 SFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL---------IS 586
+ A + R++A + I
Sbjct: 120 HVRRHDEIFAAINAVSESD-------------------AQTRQQAAAIMRQHLNEEGVIQ 160
Query: 587 EMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE 646
+L++ D + ++ + + + L I G P + + +
Sbjct: 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDL-LA 219
Query: 647 HCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ AGH H EKP+ V I ++
Sbjct: 220 QFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYL 252
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 55/293 (18%), Positives = 103/293 (35%), Gaps = 36/293 (12%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGA--FLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
G ++ Y G ++G +L +HG +L +R+ I +A R A L+G G+S+K
Sbjct: 18 LGERMHYVDVGPRDGTPVLFLHGNPTSSYL--WRNIIPHVAPSH-RCIAPDLIGMGKSDK 74
Query: 471 PNIVYT--ELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
P++ Y + L F +E +G E V L+ + G A P VK + +
Sbjct: 75 PDLDYFFDDH--VRYLDAF-IEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE 587
+ +F+ R+ R + N F++ P R + +
Sbjct: 132 IRPFPTWDEWPEFA--RETFQAFRTADVGRELIIDQNA--FIEGALPKCVVRPLTEVEMD 187
Query: 588 MLRASY-DPGVLVVLESIFSFKLSLPLNY--------------LLEGFKEKVLIIQGIKD 632
R + P E ++ F LP+ L L+ G
Sbjct: 188 HYREPFLKPV---DREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPG 244
Query: 633 PISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESK 684
+ ++ A E ++ H ++ P+ + S I+ W+ +
Sbjct: 245 VLIP-PAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 47/291 (16%), Positives = 93/291 (31%), Gaps = 49/291 (16%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDN-IYDIADGGNRVWAITLLGFGRSEKPN 472
+ Y G G ++ + G G + + + G R G G +E
Sbjct: 31 RVINLAYDDNG-TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE 89
Query: 473 IVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
+T + + P ++G S+G + + + P +V S VL+
Sbjct: 90 -GFT-------TQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLM 141
Query: 526 NSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLI 585
+ G + F + ++L L NF ++ D +
Sbjct: 142 ATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL--ENFSRKTLNDDVAVGDWIAM 199
Query: 586 SEMLRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638
M PG+ L+ ++ P VL+I D ++
Sbjct: 200 FSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAP-----------VLVIGFADDVVTP-- 246
Query: 639 SKVAMFKEHCAGI------VIRELDAGHCPHDEKPEEVNSIISEWIVTIES 683
+ +E + I DAGH E+PE VN+ + ++ ++++
Sbjct: 247 --PYLGREVADALPNGRYLQIP--DAGHLGFFERPEAVNTAMLKFFASVKA 293
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 57/307 (18%), Positives = 105/307 (34%), Gaps = 49/307 (15%)
Query: 406 YSTRIWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFLEHYRDNIYDIAD-GGNRVWA 459
S+R + ++ V E ++++HG +Y NI +AD G V
Sbjct: 28 VSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIH 87
Query: 460 ITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVA 512
+G G S + W+ + F E E H++G S GG A +A
Sbjct: 88 YDQVGCGNSTHLPDAPADF-WT--PQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIA 144
Query: 513 CLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQC 572
P+ + S+ + NS ++ + + + + +A P A L I++
Sbjct: 145 VRQPSGLVSLAICNSPASM---RLWSEAAGDLRAQLPAETRAALDRHEAAGTITH----- 196
Query: 573 YPTRRERADDWLISEMLRASYDPGVLVVL------ESIFSFKLSLPLNYLLEGFKEK--- 623
P + A ++ + R P E ++ P + + G
Sbjct: 197 -PDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSV 255
Query: 624 ----------VLIIQGIKDPISDSKSKVAMFKE--HCAGIVIRELDAGHCPHDEKPEEVN 671
VL+I G D + + V HC H EKPEE
Sbjct: 256 IDRLPDVTAPVLVIAGEHDEATPKTWQ-PFVDHIPDVRSHVFP--GTSHCTHLEKPEEFR 312
Query: 672 SIISEWI 678
+++++++
Sbjct: 313 AVVAQFL 319
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 3e-18
Identities = 57/318 (17%), Positives = 105/318 (33%), Gaps = 64/318 (20%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
NG + G EGP IL +HGF +R + +A+ G R A L G+G + +
Sbjct: 19 NGLNMHLAELG-EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL 77
Query: 474 V----YTELMWSELLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVV 523
++ L+ D V ++ E V ++ + G + P VK++V
Sbjct: 78 NDPSKFS---ILHLVGD-VVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALV 133
Query: 524 LINSA-GNVIPEYSFLQFSNERQASG--------PIRLGAQLLLFYLRLNISNFVKQCYP 574
++ P+ + ++ P + A+ + + +K+
Sbjct: 134 NLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEF----APIGAKSVLKKILT 189
Query: 575 TRRERADDWLISEMLRASYDPGVLVVLESIFS----------FK---LSLPLNY------ 615
R + + L A D V L S S F+ + +NY
Sbjct: 190 YRDPAPFYFPKGKGLEAIPDAP--VALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPI 247
Query: 616 ---LLEGFKEK-----VLIIQGIKDPI-----SDSKSKVAMFKEHCAGIVIREL--DAGH 660
L + I G D + + FK+ + + A H
Sbjct: 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAH 307
Query: 661 CPHDEKPEEVNSIISEWI 678
E+P E++ I ++I
Sbjct: 308 FVSQERPHEISKHIYDFI 325
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 4e-18
Identities = 51/295 (17%), Positives = 91/295 (30%), Gaps = 73/295 (24%)
Query: 414 NGYQIQYTVAGK-EGPAILLVHGFG-----------AFLEHYRDNIYDIADGGNRVWAIT 461
+G + Y + G E P + L + G A H+R V
Sbjct: 13 DGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFR------------VLRYD 60
Query: 462 LLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACL 514
G G S P YT L +V+ H +G S+GG +A
Sbjct: 61 ARGHGASSVPPGPYT-------LARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALH 113
Query: 515 WPAVVKSVVLINSAGNVIPEYSFLQ-FSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY 573
P ++ +VL N++ + P + + + QA A L + F
Sbjct: 114 APQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNW-------FPPALL 166
Query: 574 PTRRERADDWLISEMLRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLI 626
+ + ML A+ G+ ++ ++ P L+
Sbjct: 167 ERAEPVVERFR--AMLMATNRHGLAGSFAAVRDTDLRAQLARIERP-----------TLV 213
Query: 627 IQGIKDPISDSKSKVAMFKEHCAGI---VIRELDAGHCPHDEKPEEVNSIISEWI 678
I G D + + + + A I + L A H + E P+ + ++
Sbjct: 214 IAGAYDTV----TAASHGELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFL 264
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 5e-18
Identities = 54/286 (18%), Positives = 96/286 (33%), Gaps = 30/286 (10%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
I V G GPA+LL+HGF L + +A+ V L G+G S KP
Sbjct: 13 GDVTINCVVGG-SGPALLLLHGFPQNLHMWARVAPLLAN-EYTVVCADLRGYGGSSKPVG 70
Query: 474 VYTELMWS--ELLRDFTVEVVG----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
+S + D E++ E HL+G++ GG +A P V S+ +++
Sbjct: 71 APDHANYSFRAMASD-QRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDI 129
Query: 528 AGNVIPEYSFLQFS-NERQASGPIRLGAQ---LLLFYLRLNISNFVKQCYPTRRERADDW 583
+ F + +A Q + + F + C D
Sbjct: 130 ---IPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADG 186
Query: 584 L----ISEMLRASYDPGVLVVLESIF-----SFKLSLPLNYLLEGFKEK--VLIIQGIKD 632
+ E + DP + + L++ G + + L+ G
Sbjct: 187 FDPEQLEEYRKQWRDPA---AIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAG 243
Query: 633 PISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ ++ A + L GH D P++ I+ E++
Sbjct: 244 LMHSLFEMQVVWAPRLANMRFASLPGGHFFVDRFPDDTARILREFL 289
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 85.6 bits (211), Expect = 5e-18
Identities = 37/326 (11%), Positives = 93/326 (28%), Gaps = 58/326 (17%)
Query: 412 RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGN-------RVWAITLLG 464
+ + Q ++ +HG G + + + +V I +
Sbjct: 37 VYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN 96
Query: 465 FGRSEKPN--IVYTELMWSELLRDF---------TVEVVGEPVHLIGNSIGGYFVAIVAC 513
G S N + T W + RD +++ +IG+S+GG+
Sbjct: 97 HGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDV 156
Query: 514 LWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY 573
L P + ++LI + + + + L ++ +
Sbjct: 157 LQPNLFHLLILIEPV--------VITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHF 208
Query: 574 PTRRERADDWLISEMLRASYDPGVL------------VVLESIFSFKLSLP--------- 612
E ++ + + +L E + +
Sbjct: 209 ANESE-YVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYM 267
Query: 613 --------LNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPH 663
L ++ +++ + I G + ++++ + ++ + + H +
Sbjct: 268 NMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFL-QKTLQNYHLDVIPGGSHLVN 326
Query: 664 DEKPEEVNSIISEWIVTIESKVPAES 689
E P+ V I+ I P +S
Sbjct: 327 VEAPDLVIERINHHIHEFVLTSPLQS 352
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 6e-18
Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 33/278 (11%)
Query: 414 NGYQIQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP 471
++ Y + +GPAILL+ G+ Y+ I ++ RV G G S
Sbjct: 12 FDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDA-DFRVIVPNWRGHGLSPSE 70
Query: 472 NIVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACL-WPAVVKSVV 523
+ ++ + + E + +S GG+ + + P +
Sbjct: 71 VPDFG-------YQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGI 123
Query: 524 LINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583
+++ P+ F + + R G L +R
Sbjct: 124 IMDWLM-WAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDG----------HDEKRVRHH 172
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEK--VLIIQGIKDPISDSKSKV 641
L+ EM YD ++ + ++ + + I + +
Sbjct: 173 LLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEP-EYEKIN 231
Query: 642 AMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ F E +L H P + P+ I E+
Sbjct: 232 SDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIREFA 269
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 9e-18
Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 41/293 (13%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+ +I V G +GP +LL+HGF + +A+ +V L G+G S+ P
Sbjct: 21 SSGRIFARVGG-DGPPLLLLHGFPQTHVMWHRVAPKLAERF-KVIVADLPGYGWSDMPES 78
Query: 474 VYTELMWS--ELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
++ + + +E + L G++ G +A P + + +++
Sbjct: 79 DEQHTPYTKRAMAKQ-LIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDI 137
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLF--------YLRLNISNFVKQCYPTRRER 579
+ + + + ++ L L + +VK +
Sbjct: 138 ---LPTYEYWQRMNRAYAL----KIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRA 190
Query: 580 ADDWLISEMLRASY-----DPGVLVVLESIF-----SFKLSLPLNYLLEGFKEK----VL 625
D Y DP + + + K +L
Sbjct: 191 GDLSAFDPRAVEHYRIAFADPM---RRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPML 247
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ G + + + ++++ + + +++GH +E P++ + +
Sbjct: 248 ALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPEEAPDQTAEALVRFF 300
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 1e-17
Identities = 50/299 (16%), Positives = 83/299 (27%), Gaps = 37/299 (12%)
Query: 407 STRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYD-IADGGNRVWAITLLG 464
S RI ++ G PA+LLV G + D +ADGG V
Sbjct: 2 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRD 61
Query: 465 FGRSEKPNIVYTELMWSELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVK 520
GRS + + EL D V V+ + H++G S+G ++A +
Sbjct: 62 TGRSTTRDFAAHPYGFGELAAD-AVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 120
Query: 521 SVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK---------- 570
S+ ++ G I + ++ + + G Q ++ +
Sbjct: 121 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRV 180
Query: 571 --------QCYPTRRERADDWLISEMLRASYDP-GVLVVLESIFSFKLSLPLNYLLEGFK 621
P W + A L
Sbjct: 181 SKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA---ELREVT 237
Query: 622 EKVLIIQGIKDPI---SDSKSKVAMFKEHCAGIVIRELD-AGHCPHDEKPEEVNSIISE 676
L+IQ DPI K +A + E+ GH + +I
Sbjct: 238 VPTLVIQAEHDPIAPAPHGK-HLA---GLIPTARLAEIPGMGHALPSSVHGPLAEVILA 292
|
| >1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A* Length = 509 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 2e-17
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 35 TAAATSKGRSGSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNE----- 89
+ + + G G +++WF++DLRV+D+ L AA + V+ L+V+ Y
Sbjct: 2 SGSVSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRW 61
Query: 90 -MLELVIFALEDLRKSLKEQGSDLMIRFGR-VENVIRELVEEVKATSVFAEEEVE 142
+ +L L SL+ G+ L+ + + ++V+ A+ +F +
Sbjct: 62 WLKN----SLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112
|
| >1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1 Length = 471 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 2e-17
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 40/218 (18%)
Query: 47 AVIWFKQDLRVDDHLGLVAASKYQA--VVPLYVFDHRILSRY--SNEMLELVIFALEDLR 102
++WF+QDLR+ D+L L AA + + V+ LY+ R + + S EL+ L L+
Sbjct: 3 HLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQ 62
Query: 103 KSLKEQGSDLMIR----FGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK 158
+L E+G L+ R F +++++ E T +F + E + R V+ L
Sbjct: 63 IALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRN 122
Query: 159 VSLV----------------DGKP-KICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSP 201
V + + K+ TPF N + K R
Sbjct: 123 VVCEGFDDSVILPPGAVMTGNHEMYKVF---TPFK------------NAWLKRLREGMPE 167
Query: 202 ILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEES 239
+ + + P T + ++ + + +EE
Sbjct: 168 CVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEK 205
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 5e-17
Identities = 50/307 (16%), Positives = 94/307 (30%), Gaps = 43/307 (14%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGF--GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
G + Y G ++ P +L +HG + + +R+ + ++ A L+GFG+S K
Sbjct: 15 LGSSMAYRETGAQDAPVVLFLHGNPTSSHI--WRNILPLVSPVA-HCIAPDLIGFGQSGK 71
Query: 471 PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAG 529
P+I Y L F + +L+ G +A +A P V+ + +
Sbjct: 72 PDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGT-ALAFHLAARRPDFVRGLAFMEF-- 128
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYL-------RLNISNFVKQCYPTRRERADD 582
+ P ++ F + A A +F I
Sbjct: 129 -IRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVR 187
Query: 583 WLISEMLRASY-----DPGVLVVLESIFSFKLSLPLNY--------------LLEGFKEK 623
L E + Y P + +F LP+ L
Sbjct: 188 KLGDEEMAP-YRTPFPTPE---SRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYP 243
Query: 624 VLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682
L+ G + + F + L H ++ + + ++ WI IE
Sbjct: 244 KLLFTGEPGALVSPEF-AERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302
Query: 683 SKVPAES 689
+ P +
Sbjct: 303 AVRPQLA 309
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 5e-17
Identities = 53/296 (17%), Positives = 95/296 (32%), Gaps = 74/296 (25%)
Query: 414 NGYQIQYTVAGKE---GPAILLVHGFG-----------AFLEHYRDNIYDIADGGNRVWA 459
NG ++ Y + G+ P I+L + G A +H+R YD
Sbjct: 10 NGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYD---------- 59
Query: 460 ITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVA 512
G G SE P YT + T +V+G + G S+GG +A
Sbjct: 60 --TRGHGHSEAPKGPYT-------IEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALA 110
Query: 513 CLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQC 572
++ V L N+A + ++ + + + G L +L + F
Sbjct: 111 ARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLPRW-------FTADY 163
Query: 573 YPTRRERADDWLISEMLRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVL 625
++ + G E+I + + +P L
Sbjct: 164 MEREPVVLAMIR--DVFVHTDKEGYASNCEAIDAADLRPEAPGIKVP-----------AL 210
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGI---VIRELDAGHCPHDEKPEEVNSIISEWI 678
+I G D + A +E I ELDA H + E+ + + +++
Sbjct: 211 VISGTHDLAAT----PAQGRELAQAIAGARYVELDASHISNIERADAFTKTVVDFL 262
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 6e-17
Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 64/294 (21%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFG-----------AFLEHYRDNIYDIADGGNRVWAITLL 463
+ V G +I+ GFG AF E +R V +
Sbjct: 8 LSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHR------------VILFDYV 55
Query: 464 GFGRSEKP----NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVV 519
G G S+ N T +++ + D + + +G+S+G + + P +
Sbjct: 56 GSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELF 115
Query: 520 KSVVLINSAGNVIPEYSFLQ--FSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRR 577
+V++ + + + F E+ L + Y+ + F
Sbjct: 116 SHLVMVGPSPCYLNDPPEYYGGFEEEQLL----GLLEMMEKNYIGW-ATVFAATVLNQPD 170
Query: 578 ERADDWLISEMLRASYDPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQGI 630
+ ++ ++ F K+++P LI+Q
Sbjct: 171 RPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVP-----------SLILQCA 219
Query: 631 KDPISDSKSKVAMFKEHCAGI------VIRELDAGHCPHDEKPEEVNSIISEWI 678
D I+ + K + + GHCPH P+E +I +++
Sbjct: 220 DDIIAP----ATVGKYMHQHLPYSSLKQME--ARGHCPHMSHPDETIQLIGDYL 267
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 1e-16
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 24/283 (8%)
Query: 414 NGYQIQYTVAG--KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP 471
NG I Y + +E ++ +HG Y ++ D+ G V G GRSE+P
Sbjct: 13 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEP 72
Query: 472 NI-VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
+ +T E ++ G E V L+G+S GG A + +K +++
Sbjct: 73 DQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLS 132
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN-----FVKQCYPTRRERADDWL 584
+ +P ++ N P + + + + N V Y R++DW
Sbjct: 133 S-VPLT--VKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWP 189
Query: 585 ISEMLRASY--DPGVLVV--LESIFSFKLSLPLNYLLEGFKE---KVLIIQGIKDPISDS 637
+ Y V + + F+ ++ + + LI G D ++ +
Sbjct: 190 PEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPN 249
Query: 638 KSKVAMFKE--HCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
++ + ++ V R D H E E N ++S++I
Sbjct: 250 VAR-VIHEKIAGSELHVFR--DCSHLTMWEDREGYNKLLSDFI 289
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 29/279 (10%)
Query: 412 RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEK 470
R I G P ++ +HG G + G G A+ L G G S
Sbjct: 66 RVQAGAISALRWGGSAPRVIFLHGGGQ----NAHTWDTVIVGLGEPALAVDLPGHGHSAW 121
Query: 471 -PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
+ Y+ + SE L E+ ++G S+GG +A + P +V +VL++
Sbjct: 122 REDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVT- 180
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEML 589
P + G + L F + + P R ++ +
Sbjct: 181 ---PSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNS 237
Query: 590 RASYDPGVLVVLESIFSFKLSLPLNY--------LLEGFKEKVLIIQGIKDPISDSKSKV 641
R + + ++ + ++ + +++G +
Sbjct: 238 RRLDNGN--------WVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFV-TDQDT 288
Query: 642 AMFKEHC--AGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
A V +GH ++P + I+ +
Sbjct: 289 AELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVL 327
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 5e-16
Identities = 57/290 (19%), Positives = 103/290 (35%), Gaps = 39/290 (13%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+I AG G +LL+HG+ + +A+ V A L G+G S +P
Sbjct: 13 TEARINLVKAG-HGAPLLLLHGYPQTHVMWHKIAPLLAN-NFTVVATDLRGYGDSSRPAS 70
Query: 474 VYTELMWS--ELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
V + +S + +D V E +++G+ G +A P VK + L
Sbjct: 71 VPHHINYSKRVMAQD----QVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLAL 126
Query: 525 INSA-GNVIPEYSFLQFSNERQASGPIRLGAQLLLF---YLRLNISNFVKQCYPTRRERA 580
++ A + + + +F A Q + N ++++C +
Sbjct: 127 LDIAPTHKMYRTTDQEF---ATAYYHWFFLIQPDNLPETLIGANPEYYLRKCL--EKWGK 181
Query: 581 DDWLISEMLRASY-----DPGVLVVLESIF-----SFKLSLPLNYLLEGFKEK--VLIIQ 628
D A Y P V+ + + + L + L K VL++
Sbjct: 182 DFSAFHPQALAEYIRCFSQPA---VIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLW 238
Query: 629 GIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
G K I +A ++E + + L GH +E PEE I ++
Sbjct: 239 GEKGIIGRKYDVLATWRERAIDVSGQSLPCGHFLPEEAPEETYQAIYNFL 288
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 76/305 (24%)
Query: 416 YQIQYTVAGKEGPAILLVHGFG-----------AFLEHYRDNIYDIADGGNRVWAITLLG 464
+ + P ++L+ G G + Y+ V G
Sbjct: 5 LSLSPPPYA-DAPVVVLISGLGGSGSYWLPQLAVLEQEYQ------------VVCYDQRG 51
Query: 465 FGRS-EKPNIVYTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACLWP 516
G + + Y+ + E+ E ++G+++G +A +P
Sbjct: 52 TGNNPDTLAEDYS-------IAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYP 104
Query: 517 AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR 576
A V ++ +N + + R+ L + ++ +
Sbjct: 105 ASVTVLISVNGWLRINAH--TRRCFQVRER----LLYSGGAQAWVEAQPLFLYPADWMAA 158
Query: 577 RERADDWLISEMLRASYDP-GVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQ 628
R + + L +L L ++ ++ P V II
Sbjct: 159 RAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCP-----------VQIIC 207
Query: 629 GIKDPISDSKSKVAMFKEHCAGI------VIRELDAGHCPHDEKPEEVNSIISEWIVTIE 682
D + A E A + V+ GH + PE N+++ + ++
Sbjct: 208 ASDDLLVP----TACSSELHAALPDSQKMVMP--YGGHACNVTDPETFNALLLNGLASLL 261
Query: 683 SKVPA 687
A
Sbjct: 262 HHREA 266
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 49/286 (17%), Positives = 102/286 (35%), Gaps = 33/286 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G ++ Y G +GP ++LVHGFG + + ++A V A L G G+SE P
Sbjct: 18 DGVKLHYVKGG-QGPLVMLVHGFGQTWYEWHQLMPELAK-RFTVIAPDLPGLGQSEPPKT 75
Query: 474 VYTELMWSELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528
Y+ ++ ++ P L+ + IG + + A + +V + +
Sbjct: 76 GYSG---EQVAVY-LHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131
Query: 529 GNVIPEYSFLQFSNERQASGP-IRLGAQLLLF---YLRLNISNFVKQCYPTRRERADDWL 584
Y F F+ + ++ A + F++ + ++ +
Sbjct: 132 IPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFI--KSHASNTEV 189
Query: 585 ISEMLRASY-----DPGVLVVLESIF----SFKLSLPLNYLLEGFKEK--VLIIQGIKDP 633
SE L Y P L + F + S+ N L + + + + G
Sbjct: 190 FSERLLDLYARSYAKPH---SLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAG 246
Query: 634 ISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + K + + L GH +E +N ++ +++
Sbjct: 247 GMGTFQ-LEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFL 291
|
| >2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A* Length = 482 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 31/223 (13%), Positives = 57/223 (25%), Gaps = 32/223 (14%)
Query: 43 RSGSAVIWFKQDLRVDDHLGLVAASKY-----QAVVPLYVFDHRIL---SRYSNEMLELV 94
G V W +D R +D+ L+ + VV ++ L R ML+
Sbjct: 35 GDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLTDEFLEAGIRQYEFMLK-- 92
Query: 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMM-AIVD 153
L++L SL + G I V++ A ++ + Q + ++
Sbjct: 93 --GLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVIS 150
Query: 154 ETLAKVSLVDGKPKICLWQ---------------TPFYDIKNLNDLPVSHNEFRKLQRPL 198
VD + P L + E
Sbjct: 151 GISIPFFEVDAH---NVVPCWEASQKHEYAAHTFRPKLY-ALLPEFLEEFPELEPNSVTP 206
Query: 199 TSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWT 241
+ + G E N++P +
Sbjct: 207 ELSAGAGMVETLSDVLETGVKALLPERALLKNKDPLFEPWHFE 249
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 2e-15
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 414 NGYQIQYTVAG--KEGPAILLVHGFGAFLEHYR--DNIYDIADGGNRVWAITLLGFGRSE 469
NG ++ +I L HG+ + D + + G V+A GFGRS
Sbjct: 12 NGTRVFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSA 71
Query: 470 KPNIV----YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
+E +RD+ ++G S+GG V + +P +V ++ +
Sbjct: 72 SSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAV 131
Query: 526 NSAGNVIPEY 535
A +
Sbjct: 132 APAWVESLKG 141
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 2e-15
Identities = 46/273 (16%), Positives = 85/273 (31%), Gaps = 20/273 (7%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
++ G EGPA+ ++HG + G RV G GRS +
Sbjct: 11 GEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELP 70
Query: 473 IVYTELMWSELLRDFTVEVV----G-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
L+ D ++ G E L+ + G V +P +++L
Sbjct: 71 QDPRLFTVDALVED--TLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPW 128
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ-CYPTRRER-ADDWLI 585
+ + + + L R + +PT R R A +WL
Sbjct: 129 VN---FPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLA 185
Query: 586 SE-MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMF 644
+ S PG+ + ++ L + + ++ G +D S ++
Sbjct: 186 EGAGILGSDAPGLAFLRNGLWRL----DYTPYLTPERRPLYVLVGERDGTSYPYAEEVAS 241
Query: 645 KEHCAGIVIRELDAGHCPHDEKPEEVNSIISEW 677
+ V+ +AGH + PE E
Sbjct: 242 RLRAPIRVLP--EAGHYLWIDAPEAFEEAFKEA 272
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 4e-15
Identities = 39/289 (13%), Positives = 81/289 (28%), Gaps = 52/289 (17%)
Query: 420 YTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM 479
+ G +LL HGFG +R + ++ V +G G+S+ +
Sbjct: 21 INITGGGEKTVLLAHGFGCDQNMWRFMLPELEKQ-FTVIVFDYVGSGQSDLESFSTKRYS 79
Query: 480 WSELLRDFTVEVVG----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI--P 533
E E++ V +IG+S+ I + + + +I + + P
Sbjct: 80 SLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP 139
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
F + L + Y+ + +S +
Sbjct: 140 PDYVGGFERDDLE----ELINLMDKNYIGW-ANYLAPLVMGASHSSELIGELSGSFCTTD 194
Query: 594 DPGVLVVLESIFSF-------KLSLPLNYLLEGFKEKVLIIQGIKD---PISDSK----- 638
++ F +S P LI Q KD +
Sbjct: 195 PIVAKTFAKATFFSDYRSLLEDISTP-----------ALIFQSAKDSLASPEVGQYMAEN 243
Query: 639 ---SKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESK 684
S++ + + GHC H + ++ +I +++
Sbjct: 244 IPNSQLELIQ-----------AEGHCLHMTDAGLITPLLIHFIQNNQTR 281
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 44/305 (14%)
Query: 412 RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIA-DGGNRVWAITLLGFGRSEK 470
+ +G EGP +LL+HG G + I R+ A+ L G ++
Sbjct: 23 ETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKV 82
Query: 471 PN-IVYT-ELMWS---ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL--WPAVVKSVV 523
N + E M ++ ++ P+ LIG+S+GG +A+ + +
Sbjct: 83 KNPEDLSAETMAKDVGNVVEAMYGDL-PPPIMLIGHSMGG-AIAVHTASSNLVPSLLGLC 140
Query: 524 LINSAGNVIPEYS----------FLQFSNERQA------SGPIR--LGAQLLLFYLRLNI 565
+I+ + F + A SG IR A++ +
Sbjct: 141 MIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQC 200
Query: 566 SNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVL 625
+++ W I Y G L ++F +P L
Sbjct: 201 EGITSPEGS-KKDHPYTWRIELAKTEKYWDGWFRGLSNLFL-SCPIP-----------KL 247
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKV 685
++ D + + M V+ GH H++ P++V ++ +++
Sbjct: 248 LLLAGVDRLDKDLTIGQMQG-KFQMQVLP--QCGHAVHEDAPDKVAEAVATFLIRHRFAE 304
Query: 686 PAESF 690
P F
Sbjct: 305 PIGGF 309
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 19/266 (7%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G I + +G GP ++LV G + +A V G G S
Sbjct: 11 DGTPIAFERSG-SGPPVVLVGGALSTRAGGAPLAERLAPH-FTVICYDRRGRGDSGDTP- 67
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
Y E L ++ G + G S G + A + + V P
Sbjct: 68 PYAVEREIEDLAAI-IDAAGGAAFVFGMSSGAGLSLLAAASGLPITRLAVFE-------P 119
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
Y+ RL A L ++ F+ + + + M
Sbjct: 120 PYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGME 179
Query: 594 DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE--HCAGI 651
+ + ++P L++ G P + + + +
Sbjct: 180 AVAHTLPYDHAVMGDNTIPTA-RFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYV 238
Query: 652 VIRELDAGHCPHDEKPEEVNSIISEW 677
+ + H P+ + ++ E+
Sbjct: 239 TLE--NQTHTVA---PDAIAPVLVEF 259
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 74.7 bits (183), Expect = 2e-14
Identities = 54/341 (15%), Positives = 96/341 (28%), Gaps = 76/341 (22%)
Query: 414 NGYQIQYTVAG---KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK 470
G +I ++GP ++L+HGF +R I +A G RV AI G+GRS K
Sbjct: 11 RGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSK 70
Query: 471 PNIV--YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF--------------VAIVACL 514
+ Y + E ++G+ G V ++
Sbjct: 71 YRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVP 130
Query: 515 WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIR--------------LGAQLLLFY 560
+ + + G P L+ + + L LL
Sbjct: 131 FAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRGWLLGLT 190
Query: 561 LRLNISNFVKQCY-------------PTRRERADDWLISE---MLRASYDPGVL------ 598
++ + P RA ++E + A P +
Sbjct: 191 YTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETMPAWFTE 250
Query: 599 ----VVLESIFSFKLSLPLNY------------LLEGFKEKV--LIIQGIKDPISDSKSK 640
PL++ +G L I G D + ++
Sbjct: 251 ADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQ 310
Query: 641 -VAMFKEHCAGIVIREL--DAGHCPHDEKPEEVNSIISEWI 678
+ E + D GH E PEE N ++ +++
Sbjct: 311 AIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFL 351
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 13/270 (4%)
Query: 414 NGYQIQYTVAG--KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP 471
+G ++ + P +L + G + D +A RV + G G S+
Sbjct: 14 DGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDW-RVLCPEMRGRGDSDYA 72
Query: 472 --NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
+ Y + + + L + E IG S+GG ++A PA + + VL +
Sbjct: 73 KDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP 132
Query: 530 NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE-- 587
+ + + + A ++
Sbjct: 133 -EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSS 191
Query: 588 -MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAMFK 645
+ YD + E+ + + L + + +L+++G I S A
Sbjct: 192 GRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDIL-SAQTAAKMA 250
Query: 646 EHCAGIVIREL-DAGHCPHDEKPEEVNSII 674
G+ + L GH P ++PE + +I
Sbjct: 251 SR-PGVELVTLPRIGHAPTLDEPESIAAIG 279
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-13
Identities = 49/298 (16%), Positives = 92/298 (30%), Gaps = 56/298 (18%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHY--RDNIYDIADGGNRVWAITLLGFGRSEKP 471
+I Y G GP +LL+HG+ F + I +A+ V L GFG SEKP
Sbjct: 17 PDVKIHYVREG-AGPTLLLLHGWPGF--WWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKP 72
Query: 472 NIV----YTELMWSELLRDFTVEVVG-------EPVHLIGNSIGGYFVAIVACLWPAVVK 520
++ Y+ + D E +++G+ + + V
Sbjct: 73 DLNDLSKYSL---DKAADD----QAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVI 125
Query: 521 SVVLINSAGNVIPEYSFLQFSNER----------QASGPIRLGAQLLLFYLRLNISNFVK 570
+ + + P++ + F Q + ++ R + K
Sbjct: 126 KAAIFDP---IQPDFGPVYFGLGHVHESWYSQFHQLDMAVE-----VVGSSREVCKKYFK 177
Query: 571 QCYPT---RRERADDWLISEMLRASYDPGVLVVLESIF-----SFKLSLPLNYLLEGFKE 622
+ R E + + + P + F + + L L+
Sbjct: 178 HFFDHWSYRDELLTEEELEVHVDNCMKPD---NIHGGFNYYRANIRPDAALWTDLDHTMS 234
Query: 623 K--VLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEW 677
V +I G+ D + ++ + + + D GH EKPE I
Sbjct: 235 DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 292
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 2e-13
Identities = 39/264 (14%), Positives = 93/264 (35%), Gaps = 41/264 (15%)
Query: 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRD 486
A+LL+HGF R + G A G G + + W + + +
Sbjct: 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMN 75
Query: 487 FTVEVV---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNE 543
+ E + + G S+GG F + P ++ +V + + + E + +
Sbjct: 76 GYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEG--- 130
Query: 544 RQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLES 603
+L Y R Y R ++++ + EM + P +++
Sbjct: 131 -------------VLEYARE---------YKKREGKSEEQIEQEMEKFKQTP-----MKT 163
Query: 604 IFSF-KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL---DAG 659
+ + +L + L+ ++Q D + + S + V + +G
Sbjct: 164 LKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPVKQIKWYEQSG 222
Query: 660 HC-PHDEKPEEVNSIISEWIVTIE 682
H D++ ++++ I ++ +++
Sbjct: 223 HVITLDQEKDQLHEDIYAFLESLD 246
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 4e-13
Identities = 34/260 (13%), Positives = 73/260 (28%), Gaps = 48/260 (18%)
Query: 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488
++L+H + + G V+ G G E +I T+ + +
Sbjct: 24 GVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDI-LTKGNPDIWWAESS 82
Query: 489 VEV-----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNE 543
V V + G S+GG F P + V +
Sbjct: 83 AAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPI--------------- 127
Query: 544 RQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLES 603
+ L+ +L+ + ++ + E +Y PG L +
Sbjct: 128 ------LPGKHHLVPGFLKY--AEYMNRLAGKSDESTQIL--------AYLPGQLAAI-- 169
Query: 604 IFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL----DAG 659
+ + + L K+ I Q +D + D + ++ + DA
Sbjct: 170 ---DQFATTVAADLNLVKQPTFIGQAGQDELVDGRL-AYQLRDALINAARVDFHWYDDAK 225
Query: 660 HC-PHDEKPEEVNSIISEWI 678
H + + + ++
Sbjct: 226 HVITVNSAHHALEEDVIAFM 245
|
| >3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group} Length = 506 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 9e-13
Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 40/206 (19%)
Query: 42 GRSGSAVI-WFKQDLRVDDHLGLVAASKY-----QAVVPLYVFDHRILSRYSNE-----M 90
G+ G V+ W +D R+ D+ L+ A+ + + R + +
Sbjct: 34 GKPGGPVVYWMLRDQRLADNWALLHAAGLAAASASPLAVAFALFPRPFLLSARRRQLGFL 93
Query: 91 LELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMA 150
L L L + + G + LV+ + A+++ A+ +R+ +
Sbjct: 94 LR----GLRRLAADAAARHLPFFLFTGGPAEIP-ALVQRLGASTLVADFSPLRPVREALD 148
Query: 151 IVDETLAK------VSLVDGKPKICLW---------QTPFYDIKNLNDLPVSHNEFRK-L 194
V L + V VD + + + + L
Sbjct: 149 AVVGDLRREAPGVAVHQVDAH---NVVPVWTASAKMEYSAKTFR-----GKVSKVMDEYL 200
Query: 195 QRPLTSPILPPTLAGAKLEADWGPLP 220
P + P DW L
Sbjct: 201 VEFPELPAVVPWDREQPEGVDWDALI 226
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 5e-12
Identities = 35/275 (12%), Positives = 89/275 (32%), Gaps = 25/275 (9%)
Query: 417 QIQYTVAG---KEGPAILLVHGFGAFLEHYRDNIYDIADGGN-----RVWAITLLGFGRS 468
+ +TV G + PAI H G + ++ D + G
Sbjct: 22 SVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEG 81
Query: 469 EKPNIVYTELMWSELLRDFTVEVVG----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
+ + + L D ++ + +G G Y ++ A P V+ +VL
Sbjct: 82 APVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVL 141
Query: 525 INSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
IN ++ ++ + + +L F ++ E +
Sbjct: 142 INIDP---NAKGWMDWAAHKLTGLTSSIPDMILGHL-------FSQEELSGNSELIQKYR 191
Query: 585 ISEMLRASYDPGVLVVLESIFSFKLSLPLNY-LLEGFKEKVLIIQGIKDPISDSKSKVAM 643
+++ + + + + + ++ + L K V+++ G + P D+ +
Sbjct: 192 --GIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAVVECNS 249
Query: 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ ++ D+G P +P ++ ++
Sbjct: 250 KLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFL 284
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 65.4 bits (159), Expect = 9e-12
Identities = 44/261 (16%), Positives = 82/261 (31%), Gaps = 17/261 (6%)
Query: 425 KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG-RSEKPNIVYTELMWSEL 483
KEG +LVHG + + G++V A+ L G K + T ++
Sbjct: 2 KEGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLP 61
Query: 484 LRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSN 542
L + + E V L+G+S+GG + + +P + + V + + S
Sbjct: 62 LMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQ 121
Query: 543 ERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVL- 601
+ + L Y P ++ L P L +
Sbjct: 122 YNERTPAENWLDTQFLPYGSPE--------EPLTSMFFGPKFLAHKLYQLCSPEDLALAS 173
Query: 602 -----ESIFSFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAMFKEHCAGIVIRE 655
S+F LS + E F + I +D + + I
Sbjct: 174 SLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEI 233
Query: 656 LDAGHCPHDEKPEEVNSIISE 676
A H +P+++ + + E
Sbjct: 234 KGADHMAMLCEPQKLCASLLE 254
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 2e-11
Identities = 40/267 (14%), Positives = 84/267 (31%), Gaps = 15/267 (5%)
Query: 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG-RSEKPNIVYT 476
+ K+ +LVHG + + G++V A+ L G + + ++T
Sbjct: 1 MHSAANAKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHT 60
Query: 477 ELMWSELLRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY 535
+SE L + + E V L+G+S GG + + +P + V +++
Sbjct: 61 FRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHS 120
Query: 536 SFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDP 595
F + + Y + ++ +M +
Sbjct: 121 LTYPFEKYNEKCPADMMLDSQFSTYGN-------PENPGMSMILGPQFMALKMFQNCSVE 173
Query: 596 GV-----LVVLESIFSFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAMFKEHCA 649
+ L S+F L+ + E + I +D + + + A
Sbjct: 174 DLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA 233
Query: 650 GIVIRELDAGHCPHDEKPEEVNSIISE 676
V +A H +P EV + +
Sbjct: 234 DKVKEIKEADHMGMLSQPREVCKCLLD 260
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 3e-10
Identities = 37/259 (14%), Positives = 71/259 (27%), Gaps = 44/259 (16%)
Query: 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488
+LLVHGF R A G V L G G + T + + +
Sbjct: 42 GVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTT---FHDWVASVE 98
Query: 489 VEV-----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNE 543
+ + + G S+GG +A P + V + +A IP +
Sbjct: 99 EGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPI--NAAVDIPAIAAGMTGGG 156
Query: 544 RQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLES 603
+G+ ++ + PT + ++ R L+
Sbjct: 157 ELPRYLDSIGSD----LKNPDVKELAYEKTPTA-------SLLQLARLMAQ--TKAKLDR 203
Query: 604 IFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL---DAGH 660
I P LI +D + + + + + + ++ H
Sbjct: 204 I-----VCP-----------ALIFVSDEDHVVPPGN-ADIIFQGISSTEKEIVRLRNSYH 246
Query: 661 C-PHDEKPEEVNSIISEWI 678
D + E+
Sbjct: 247 VATLDYDQPMIIERSLEFF 265
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 3e-09
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 430 ILLVHGFGAF------LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483
I+LVHG LE++ D+ G V+ L GF + PN +L
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQL--LAY 68
Query: 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
++ V+L+G+S GG VA + P +V SV I +
Sbjct: 69 VKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGT 112
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 3e-09
Identities = 43/252 (17%), Positives = 80/252 (31%), Gaps = 7/252 (2%)
Query: 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG-RSEKPNIVYTELMWSELLRD 486
+L+H + + G++V A+ L G + + + +SE L
Sbjct: 4 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLT 63
Query: 487 FTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQ 545
F + GE V L+G S GG +AI A + + + V NS +
Sbjct: 64 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 123
Query: 546 ASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIF 605
+ I+ R E A +L S+F
Sbjct: 124 VFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAK----MLTRKGSLF 179
Query: 606 SFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHD 664
L+ + EG+ + + +D I + ++ + + V + H
Sbjct: 180 QNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQL 239
Query: 665 EKPEEVNSIISE 676
K +E+ I+ E
Sbjct: 240 TKTKEIAEILQE 251
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 62/276 (22%), Positives = 105/276 (38%), Gaps = 55/276 (19%)
Query: 429 AILLVHGFGAFLEH---YRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485
I + HG G EH Y + + V+A +G G+SE +V ++ + +R
Sbjct: 62 LIFVSHGAG---EHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSD--FHVFVR 116
Query: 486 DFT--VEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL 538
D V+ + G PV L+G+S+GG + A P +VLI+ PE
Sbjct: 117 DVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE---- 172
Query: 539 QFSNERQASGPIRLGAQLLLFYL-RLNISNFVKQCYPTRRE------RADDWLISEMLRA 591
A+ L A++L L L++ +R + +D + L+
Sbjct: 173 ------SATTFKVLAAKVLNLVLPNLSLGPIDSS-VLSRNKTEVDIYNSDPLICRAGLKV 225
Query: 592 SYDPGVLVVLESIFS--FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA 649
+ +L + + KL++P L++QG D + DSK + + A
Sbjct: 226 CFGIQLLNAVSRVERALPKLTVP-----------FLLLQGSADRLCDSKGAYLLMEL--A 272
Query: 650 GIVIREL----DAGHCPHDEKP---EEVNSIISEWI 678
+ L A H H E P V I+ W+
Sbjct: 273 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV 308
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 53/275 (19%)
Query: 429 AILLVHGFGAFLEH---YRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485
I + HG G EH Y + + V+A +G G+SE +V ++ + +R
Sbjct: 44 LIFVSHGAG---EHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSD--FHVFVR 98
Query: 486 DFT--VEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL 538
D V+ + G PV L+G+S+GG + A P +VLI+ PE
Sbjct: 99 DVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE---- 154
Query: 539 QFSNERQASGPIRLGAQLLLFYL-RLNISNFVKQCY---PTRRE--RADDWLISEMLRAS 592
A+ L A++L L L+ T + +D + L+
Sbjct: 155 ------SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVC 208
Query: 593 YDPGVLVVLESIFS--FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650
+ +L + + KL++P L++QG D + DSK + + A
Sbjct: 209 FGIQLLNAVSRVERALPKLTVP-----------FLLLQGSADRLCDSKGAYLLMEL--AK 255
Query: 651 IVIREL----DAGHCPHDEKP---EEVNSIISEWI 678
+ L A H H E P V I+ W+
Sbjct: 256 SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV 290
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 4e-08
Identities = 38/281 (13%), Positives = 80/281 (28%), Gaps = 62/281 (22%)
Query: 414 NGYQIQYTV---AGKEGPAILLVHGFGAFLEHYR-DNIYD-IADGGNRVWAITLLGFGRS 468
+G Q+ T G+ ++ HGF A I + + D G G S
Sbjct: 30 DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDS 89
Query: 469 EKPNIVYTELMWSELLRD-------FTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
+ + + + D + ++L+G++ GG +++A L+P ++K
Sbjct: 90 DGK---FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKK 146
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
VVL+ A + + I +
Sbjct: 147 VVLLAPAATLKGDALEGNTQGVTYNPDHI--------------PDRLPFKDLTLGGFYLR 192
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSK 638
+ F + V +I G D + SK
Sbjct: 193 IAQQLPIYEV-------------------------SAQFTKPVCLIHGTDDTVVSPNASK 227
Query: 639 SKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ + + + A HC D + ++ ++++
Sbjct: 228 ----KYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTDFL 264
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 30/243 (12%), Positives = 64/243 (26%), Gaps = 41/243 (16%)
Query: 425 KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLG-FGRSEKPNIVYTELMWSEL 483
+ IL+ GF ++H+ ++ G V+ L G S +T
Sbjct: 33 FKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNS 92
Query: 484 LR---DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQF 540
L + + + LI S+ V + ++ N + +
Sbjct: 93 LCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLE--LSFLITAVGVVN-LRDTLEKAL 149
Query: 541 SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVV 600
+ + L L +L FV+ C+ + D
Sbjct: 150 GFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDS-----------------T 192
Query: 601 LESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSKSKVAMFKEHCAGIVIRELD 657
L+ + S+P ++ D + +A + +
Sbjct: 193 LDKV--ANTSVP-----------LIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLL-G 238
Query: 658 AGH 660
+ H
Sbjct: 239 SSH 241
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 1e-07
Identities = 54/405 (13%), Positives = 116/405 (28%), Gaps = 131/405 (32%)
Query: 307 YLEGTVRD-DWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKERNA 365
+ + V + D +++Q+ ++ I+S+ + I K+ +
Sbjct: 25 FEDAFVDNFDCKDVQDMPKS--------------------ILSKE--EIDHIIMSKDAVS 62
Query: 366 GFLSPFG----YSAATIAAAADAVCSMEWYWLMS-----LRSLRSNEGVYSTRIWR-WNG 415
G L F + + V + + +LMS R +Y + R +N
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 416 YQI--QYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
Q+ +Y V+ + L R + DG +LG G++
Sbjct: 123 NQVFAKYNVSRLQ-----PYLKLRQALLELRPAKNVLIDG--------VLGSGKT----- 164
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
+ ++ + V+ + F W
Sbjct: 165 ----WVALDVCLSYKVQCKMD---------FKIF-------W------------------ 186
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQC-----YPTRRERADDWLISEM 588
L N + L +++ N+ + R L +
Sbjct: 187 ----LNLKNCNSPETVL---EMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 589 LRASYDPGVLVVLESIFSFKLSLPLNYLLEGF--KEKVLII---QGIKDPISDSKSKVAM 643
Y L+VL ++ + K F K+L+ + + D +S + +
Sbjct: 239 KSKPY-ENCLLVLLNVQNAKA-------WNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESKVPAE 688
H + P+EV S++ +++ +P E
Sbjct: 291 LDHHSMTLT--------------PDEVKSLLLKYLDCRPQDLPRE 321
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 1e-05
Identities = 77/519 (14%), Positives = 162/519 (31%), Gaps = 110/519 (21%)
Query: 7 PRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAA 66
+SR LR + + + P G GS K + +D + +
Sbjct: 128 KYNVSRL---QPYLKLR---QALLELRPAKNVLIDGVLGSG----KTWVALD----VCLS 173
Query: 67 SKYQAVVPLYVF---------DHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFG 117
K Q + +F +L EML+ +++ ++ S + S++ +R
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVL-----EMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 118 RVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDE--TLAKVSLVDGKPKICLWQTPF 175
++ +R L++ + ++ + + KI L T F
Sbjct: 229 SIQAELRRLLKSKP-------------YENCLLVLLNVQNAKAWNAFNLSCKI-LLTTRF 274
Query: 176 YDIKN-LNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPW 234
+ + L+ +H LT L + D +E + NP
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPD------EVKSLLLKYLDCRPQDLPREVLTTNPR 328
Query: 235 KLEESWTLINNMSA-----ETILTDKLSKLGKRSKRNLNNQHSP--RKRLDKSFFVTDKG 287
+L I + A + + DKL+ + + S LN RK V
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS---LNVLEPAEYRKMF-DRLSVFPPS 384
Query: 288 NTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEK-LRNAESRDGASFATLFGPAL---- 342
+ +L+ + + + V +L + L + T+ P++
Sbjct: 385 AHI---PTILLSLIWFDVIKSD--VMVVVNKLHKYSLVE---KQPKES-TISIPSIYLEL 435
Query: 343 CLGIISRRGVH------YEAIKFEKERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMS- 395
+ + + +H Y K + Y +Y +
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY----------------FYSHIGH 479
Query: 396 -LRSLRSNEGVYSTRIW----RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDI 450
L+++ E + R+ R+ +I++ +L + L+ Y+ I D
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL-NTLQQ-LKFYKPYICDN 537
Query: 451 ADGGNRVWAITLLGFGRSEKPNIV---YTELMWSELLRD 486
D +L F + N++ YT+L+ L+ +
Sbjct: 538 -DPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAE 575
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 2e-07
Identities = 22/136 (16%), Positives = 38/136 (27%), Gaps = 16/136 (11%)
Query: 409 RIWRWNGYQIQYTVAGKEG--PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG 466
R R + E +L +HG EH + A+ G + A G
Sbjct: 4 RTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHG 63
Query: 467 RSEKP--------------NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVA 512
E P + + + + G P+ L G S+G + ++
Sbjct: 64 EREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLL 123
Query: 513 CLWPAVVKSVVLINSA 528
+ I S
Sbjct: 124 AEGFRPRGVLAFIGSG 139
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 7e-07
Identities = 35/273 (12%), Positives = 84/273 (30%), Gaps = 28/273 (10%)
Query: 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG-RSEKPNIVYT 476
++ +++ +LVH + + + G+ V A+ L G ++ +
Sbjct: 3 MEKSMSPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPN 62
Query: 477 ELMWSELLRDF-TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLIN--------S 527
+ L +F E + L+G+++GG ++ +P + V ++
Sbjct: 63 FSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNID 122
Query: 528 AGNVIPEY---SFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
A V + Q N L+ + +N A
Sbjct: 123 ATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALA---- 178
Query: 585 ISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAM 643
A P L + E +S + + + + I ++ + M
Sbjct: 179 -----TALVRPLYLYLAED-----ISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLM 228
Query: 644 FKEHCAGIVIRELDAGHCPHDEKPEEVNSIISE 676
+++ V + H KP+++ + +
Sbjct: 229 IEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLS 261
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 2e-06
Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 9/256 (3%)
Query: 425 KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIVYTELMWSEL 483
+ +LVH + + G+RV A+ L G +P V T +S+
Sbjct: 2 ERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKP 61
Query: 484 LRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSN 542
L + + E V L+G S GG +A+ A ++PA +K +V + +A + +
Sbjct: 62 LIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFL-NAFLPDTTHVPSHVLD 120
Query: 543 ERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRER-ADDWLISEMLRASYDPGVLVVL 601
+ + R + +K + R + I + A +L
Sbjct: 121 KYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAK----MLHRQ 176
Query: 602 ESIFSFKLSLPLNYLLEGFKEK-VLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGH 660
S F+ LS + EG+ + + +D M V H
Sbjct: 177 GSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDH 236
Query: 661 CPHDEKPEEVNSIISE 676
KP+++ +S
Sbjct: 237 MVMLSKPQKLFDSLSA 252
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 3e-06
Identities = 42/290 (14%), Positives = 84/290 (28%), Gaps = 40/290 (13%)
Query: 427 GPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM---- 479
G ++ + G ++ + + +A G V+ I
Sbjct: 63 GEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWG 122
Query: 480 WSELLRDFT--VEVV-----GEPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSA--- 528
WS + D V + E ++L G S GG + L W +K ++L++
Sbjct: 123 WSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTK 182
Query: 529 ----GNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
E + I ++N + + D+L
Sbjct: 183 HGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFL 242
Query: 585 ISEMLRASY-------DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDS 637
+ + + + SF P LE + +GI P
Sbjct: 243 MDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLER--DLKFDYEGILVPTIAF 300
Query: 638 KSKVAMFKEHCAGI------VIRELDAGHC---PHDEKPEEVNSIISEWI 678
S+ + + I +I GH + ++VNS++ +W+
Sbjct: 301 VSERFGIQIFDSKILPSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWL 350
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 4e-06
Identities = 38/262 (14%), Positives = 78/262 (29%), Gaps = 47/262 (17%)
Query: 423 AGKEGPAILLVHGFGAFLE-HYRDNIYDIADGGNRVWAITLLGFGRSEK-PNIVYTELMW 480
K P +++ G + +R +A + + + G S K P +
Sbjct: 189 TDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLH 248
Query: 481 SELLRDFTV--EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL 538
+L + V V LIG GG + ++ L +K+ V++ + P +
Sbjct: 249 QAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGA-----PIHDIF 303
Query: 539 QFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVL 598
++ P L + D + +S + A
Sbjct: 304 ASP-QKLQQMPKMYLDVL---------------ASRLGKSVVDIYSLSGQMAA------- 340
Query: 599 VVLESIFSFKLSLPLNYLLEGFKEK--VLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL 656
SL + L K K +L + DP+S + G +++
Sbjct: 341 ----------WSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYG-KAKKI 389
Query: 657 DAGHCPHDEKPEEVNSIISEWI 678
+ E+ + +W+
Sbjct: 390 SSKTITQGY--EQSLDLAIKWL 409
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 67/278 (24%)
Query: 414 NGYQIQYTVAGKEG-PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
++ T+ G P +L VHG+G H + G L G
Sbjct: 14 GQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMR 73
Query: 473 IVYTELMWSELLRDFTVEVVGEP------VHLIGNSIGGYFVAIVACLWPAVVKSVVLIN 526
T + ++ ++ P + ++G S GGY A++ P V+ + L +
Sbjct: 74 QSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRS 131
Query: 527 SAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLIS 586
A D
Sbjct: 132 PALY-------------------------------------------------KDAHWDQ 142
Query: 587 EMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSKSKVAM 643
+ + DP ++ + +L L +K VL+++ D P ++
Sbjct: 143 PKVSLNADPDLMDYRRRALAPGDNLALAA-CAQYKGDVLLVEAENDVIVPHPVMRNYADA 201
Query: 644 FKEHCAGIVIREL--DAGHC-PHDEKPEEVNSIISEWI 678
F A + + A H E +E + +W+
Sbjct: 202 FTN--ARSLTSRVIAGADHALSVKEHQQEYTRALIDWL 237
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 Length = 285 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 1e-05
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 18/107 (16%)
Query: 430 ILLVHGFGAF-----LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELL 484
I+L HG F ++++ + G +V+ + SE E L
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVR---------GEQL 60
Query: 485 RDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
E+V V+LIG+S GG + VA + P ++ S + +
Sbjct: 61 LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 1e-05
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
G + + G +GP +LLV + G + + L G+GR+E P
Sbjct: 10 YGLNLVFDRVG-KGPPVLLVAEEA-------SRWPEALPEGYAFYLLDLPGYGRTEGPR- 60
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514
+ + F V + ++ +G + L
Sbjct: 61 -MAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEAL 100
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 61/266 (22%)
Query: 427 GPAILLVHGFGAFLEHYRDNIYDIADG----GNRVWAITLLGFGRSEKPNIVYTELMWSE 482
P +++HGF E +I + + G + G G+S+ + + +
Sbjct: 27 CPLCIIIHGFTGHSE--ERHIVAVQETLNEIGVATLRADMYGHGKSDGK---FEDHTLFK 81
Query: 483 LLRD-------FTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY 535
L + +++ G+S GG V + A + ++K+++ ++ A IPE
Sbjct: 82 WLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM-IPEI 140
Query: 536 SFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDP 595
R G L L + NI + + + + +
Sbjct: 141 --------------ARTGELLGLKFDPENIPDELDAWDGRKLKGN---YVRVAQTIR--- 180
Query: 596 GVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSKSKVAMFKEHCAGIV 652
V + + + VLI+ G +D P S + +K +V
Sbjct: 181 ----VEDFVDKYTK-------------PVLIVHGDQDEAVPYEASVAFSKQYKNC--KLV 221
Query: 653 IRELDAGHCPHDEKPEEVNSIISEWI 678
HC E V + E++
Sbjct: 222 TIP-GDTHCYDHH-LELVTEAVKEFM 245
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 32/262 (12%), Positives = 71/262 (27%), Gaps = 55/262 (20%)
Query: 423 AGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK--PNIVYTELMW 480
PA++++ G + E + D G G G + E
Sbjct: 148 GPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYT 207
Query: 481 SELLRDFTV--EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL 538
S ++ T + + + ++G S+GG + A P + + + +
Sbjct: 208 SAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR-LAACISWGGFSD-------- 258
Query: 539 QFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVL 598
+ S
Sbjct: 259 -----------------------------------LDYWDLETPLTKESWKYVSKVDT-- 281
Query: 599 VVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD--PISDSKSKVAMFKEHCAGIVIREL 656
+ E+ +L +L I+ G+ D P+S + + + +V+ +
Sbjct: 282 -LEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEK- 339
Query: 657 DAGHCPHDEKPEEVNSIISEWI 678
D HC H+ +++W+
Sbjct: 340 DGDHCCHN-LGIRPRLEMADWL 360
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 4/116 (3%)
Query: 416 YQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--I 473
G P IL +G GA Y + A G V A G + +
Sbjct: 38 RPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACL 97
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
Y ++ ++ V G+S GG + V++ I
Sbjct: 98 DYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGG--GSIMAGQDTRVRTTAPIQPYT 151
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 19/113 (16%)
Query: 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485
E +++VHG G ++ + G + + F N +L
Sbjct: 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNN-----GPVLS 56
Query: 486 DFTVEVV----GEPVHLIGNSIGGYFVAIVACLW------PAVVKSVVLINSA 528
F +V+ + V ++ +S+GG + V +VV + A
Sbjct: 57 RFVQKVLDETGAKKVDIVAHSMGG----ANTLYYIKNLDGGNKVANVVTLGGA 105
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 23/110 (20%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 428 PAILLVHGFGA--FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485
+L HG G+ + R + G I LL E LL
Sbjct: 36 GIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLA 95
Query: 486 DFTV----------EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
V + V G S GG + A P V++VV
Sbjct: 96 SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 691 | ||||
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-21 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 2e-20 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 5e-20 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-19 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 1e-18 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-18 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 4e-18 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 6e-18 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 7e-18 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 1e-17 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-17 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 4e-17 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 5e-17 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 2e-16 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 2e-16 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 2e-16 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 3e-16 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 4e-16 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 9e-16 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 1e-15 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 1e-13 | |
| d1u3da2 | 185 | c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Ara | 2e-13 | |
| d1np7a2 | 204 | c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp. | 3e-13 | |
| d1owla2 | 202 | c.28.1.1 (A:3-204) DNA photolyase {Synechococcus e | 4e-13 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-12 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 2e-12 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 3e-12 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 4e-12 | |
| d2j07a2 | 170 | c.28.1.1 (A:2-171) DNA photolyase {Thermus thermop | 4e-12 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 6e-12 | |
| d1dnpa2 | 200 | c.28.1.1 (A:1-200) DNA photolyase {Escherichia col | 5e-11 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 7e-11 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 2e-10 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 6e-08 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 8e-08 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 1e-07 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 4e-07 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 5e-07 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 8e-07 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 2e-06 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 5e-06 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 1e-04 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 0.001 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 2e-04 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 4e-04 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 4e-04 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 0.001 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 0.002 | |
| d1jfra_ | 260 | c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [Ta | 0.002 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 0.004 |
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 93.0 bits (229), Expect = 2e-21
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 12/283 (4%)
Query: 406 YSTRIWRWNGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLG 464
+ G ++ Y G ++G +L +HG +R+ I +A R A L+G
Sbjct: 7 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIG 65
Query: 465 FGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
G+S+KP++ Y L F + E V L+ + G A P VK +
Sbjct: 66 MGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIAC 125
Query: 525 INSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
+ + + +F+ E + + L+ I + +C +
Sbjct: 126 MEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDH 185
Query: 585 ISEMLRASYDPGVLVVLESIFSFKLSLPLNYL--------LEGFKEKVLIIQGIKDPISD 636
E D L + L L+ G +
Sbjct: 186 YREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLI- 244
Query: 637 SKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
++ A E ++ H ++ P+ + S I+ W+
Sbjct: 245 PPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 287
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 90.3 bits (222), Expect = 2e-20
Identities = 43/283 (15%), Positives = 83/283 (29%), Gaps = 17/283 (6%)
Query: 409 RIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRS 468
+ G ++ Y G G IL HG +R+ + A G R+ A L+G G S
Sbjct: 11 KFIEIKGRRMAYIDEG-TGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDS 68
Query: 469 EKPNIVYTELMWSELLRDFTVE-----VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVV 523
+K + E RD+ +G+ V L+ + G A V+ +
Sbjct: 69 DKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIA 128
Query: 524 LINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583
+ + I F + + + + G +L+L E
Sbjct: 129 YMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAA 188
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNY--------LLEGFKEKVLIIQGIKDPIS 635
L A + + L L I ++
Sbjct: 189 YREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALT 248
Query: 636 DSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+ + F + H ++ P+E+ + I+ ++
Sbjct: 249 TGR--MRDFCRTWPNQTEITVAGAHFIQEDSPDEIGAAIAAFV 289
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 88.4 bits (217), Expect = 5e-20
Identities = 47/267 (17%), Positives = 91/267 (34%), Gaps = 4/267 (1%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G QI Y G G I+ HG+ + + + +A G RV A G GRS +P
Sbjct: 7 DGTQIYYKDWG-SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS 65
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW-PAVVKSVVLINSAGNVI 532
+++ L + L G S GG VA A V LI++ ++
Sbjct: 66 GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLM 125
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRAS 592
+ + IR + L ++++ + ++ ++
Sbjct: 126 LKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQG 185
Query: 593 YDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV 652
G + I +F L+ L++ G D + ++ G
Sbjct: 186 MAAGHKNAYDCIKAFS-ETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGST 244
Query: 653 IREL-DAGHCPHDEKPEEVNSIISEWI 678
++ A H D +++N+ + +I
Sbjct: 245 LKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 87.7 bits (215), Expect = 2e-19
Identities = 49/285 (17%), Positives = 92/285 (32%), Gaps = 13/285 (4%)
Query: 406 YSTRIWRWNGYQIQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL 463
Y + + G + Y G L +HG + YR I A+ G RV A
Sbjct: 24 YLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFF 83
Query: 464 GFGRSEKPNIVYTELMWSELLRDFT--VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
GFG+S+KP + + L+ GG+ + P+ K
Sbjct: 84 GFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKR 143
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
++++N+ P + Q + L+ L + F+K+ PT E
Sbjct: 144 LIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEA 203
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSL------PLNYLLEGFKEKVLIIQGIKDPIS 635
+ SY GV + + + +++ + + + G+KD +
Sbjct: 204 SAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLL 263
Query: 636 DSKSKVAMFKEHCAGI--VIRELDAGHCPHDEKPEEVNSIISEWI 678
+ K G + DAGH + + + +
Sbjct: 264 GPDV-MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFA 307
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 84.5 bits (207), Expect = 1e-18
Identities = 51/269 (18%), Positives = 93/269 (34%), Gaps = 15/269 (5%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRD--NIYDIADGGNRVWAITLLGFGRSEKP 471
G Y G EG ++L+HG G + Y + RV A ++GFG +++P
Sbjct: 11 AGVLTNYHDVG-EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRP 69
Query: 472 NIVYTEL-MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
W + + + E H++GN+ GG A + V +VL+ +AG
Sbjct: 70 ENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAG- 128
Query: 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLR 590
+ + N P + LL + S + R E + E
Sbjct: 129 --TRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFS 186
Query: 591 ASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650
+ + ++++ S + + LII G +D + S E
Sbjct: 187 SMFPEPRQRWIDALASSDEDIK------TLPNETLIIHGREDQVVPLSS-SLRLGELIDR 239
Query: 651 IVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ GH E+ + N ++ E+
Sbjct: 240 AQLHVFGRCGHWTQIEQTDRFNRLVVEFF 268
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 83.0 bits (203), Expect = 2e-18
Identities = 25/254 (9%), Positives = 63/254 (24%), Gaps = 1/254 (0%)
Query: 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIVYTELMWSELL 484
EG +LVHG + + G++V A+ L G + + T ++ L
Sbjct: 1 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 60
Query: 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNER 544
+ + + ++ G +A + +A ++ +
Sbjct: 61 MELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQY 120
Query: 545 QASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESI 604
P + + + + + ++
Sbjct: 121 NERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLF 180
Query: 605 FSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHD 664
K + I +D + + I A H
Sbjct: 181 MEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAML 240
Query: 665 EKPEEVNSIISEWI 678
+P+++ + + E
Sbjct: 241 CEPQKLCASLLEIA 254
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 83.3 bits (204), Expect = 4e-18
Identities = 44/272 (16%), Positives = 93/272 (34%), Gaps = 12/272 (4%)
Query: 412 RWNGYQIQYTVAGKEGPAILLVHGFGA---FLEHYRDNIYDIADGGNRVWAITLLGF-GR 467
++ + I Y AG G ++++HG G +Y N+ D G RV GF
Sbjct: 16 GFSDFNIHYNEAG-NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKS 74
Query: 468 SEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
L+ + ++ + + HL+GN++GG A +P + ++L+
Sbjct: 75 DAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGP 134
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE 587
G ++ + + +L A+ L+ + F+ E E
Sbjct: 135 GGLGPSMFAPMPMEGIKLL---FKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRW--E 189
Query: 588 MLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEH 647
++ + ++ + + + + L K K I G D +
Sbjct: 190 AIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDH-GLKLLWN 248
Query: 648 CAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ GH E +E N ++ +++
Sbjct: 249 IDDARLHVFSKCGHWAQWEHADEFNRLVIDFL 280
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 82.3 bits (201), Expect = 6e-18
Identities = 43/267 (16%), Positives = 87/267 (32%), Gaps = 6/267 (2%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G QI + G G +L HG+ + + + ++ G R A GFGRS++P
Sbjct: 7 DGTQIYFKDWG-SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 474 VYTELMWSELLRDFTVEVVGEPV-HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532
+++ + + + V + + GG +A A V +VL+ + +
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRAS 592
+ + LL IS+F Y + + +
Sbjct: 126 GQKPDYPQGVPLDVFARFK---TELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQI 182
Query: 593 YDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIV 652
L + + L+I G D I ++ + E G
Sbjct: 183 ALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAE 242
Query: 653 IREL-DAGHCPHDEKPEEVNSIISEWI 678
++ DA H +++N + ++
Sbjct: 243 LKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 82.3 bits (201), Expect = 7e-18
Identities = 43/270 (15%), Positives = 94/270 (34%), Gaps = 9/270 (3%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G +I Y G +G ++ +HG+ + ++D + + D G R A G G S
Sbjct: 7 DGVEIFYKDWG-QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD 65
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNVI 532
Y +++ L D ++ V L+ +S+GG +A V ++S VL+++ V+
Sbjct: 66 GYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVM 125
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLF-YLRLNISNFVKQCYPTRRERADDWLISEMLRA 591
+ + ++ G + + F P + + +
Sbjct: 126 IKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM 185
Query: 592 SYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651
+ V F + L+ F L++ G D + + +
Sbjct: 186 AQTIEGGVRCVDAFGYT---DFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA 242
Query: 652 VIREL-DAGHCPH--DEKPEEVNSIISEWI 678
++ + H E+ N + E++
Sbjct: 243 ELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.2 bits (201), Expect = 1e-17
Identities = 54/299 (18%), Positives = 96/299 (32%), Gaps = 36/299 (12%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
++ + G GPA+ L HGF +R I +A G RV A+ + G+G S P
Sbjct: 20 PRVRLHFVELG-SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPE 78
Query: 474 V--YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531
+ Y + + + F ++ IG+ GG V +A +P V++V +N+
Sbjct: 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIP 138
Query: 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRA 591
S + +L Q N + R + L +
Sbjct: 139 ANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCE 198
Query: 592 SYDPGVLVVLESIFSFKLS-------------------------------LPLNYLLEGF 620
+ V E S ++ L
Sbjct: 199 AGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKI 258
Query: 621 KEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
L++ KD + + ++ + + D GH +KP EVN I+ +W+
Sbjct: 259 LIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 316
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 81.1 bits (198), Expect = 2e-17
Identities = 39/266 (14%), Positives = 73/266 (27%), Gaps = 2/266 (0%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+ Y G G ++L+HGF + + D G RV GFG+S +P
Sbjct: 11 TSIDLYYEDHG-TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 69
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
Y ++ L + + L+G S G VA + + V ++
Sbjct: 70 GYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFL 129
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
+ + A + F + +
Sbjct: 130 LKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNT 189
Query: 594 DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVI 653
+ + LI+ G D ++ +F +
Sbjct: 190 AASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEY 249
Query: 654 REL-DAGHCPHDEKPEEVNSIISEWI 678
E+ A H EEVN+ + ++
Sbjct: 250 VEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 80.3 bits (196), Expect = 4e-17
Identities = 49/294 (16%), Positives = 89/294 (30%), Gaps = 23/294 (7%)
Query: 407 STRIWRWNGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYD-IADGGNRVWAITLLG 464
S RI ++ G PA+LLV G + D +ADGG V
Sbjct: 1 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRD 60
Query: 465 FGRSEKPNIV---YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
GRS + Y + + H++G S+G ++A + S
Sbjct: 61 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSS 120
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+ ++ G I + ++ + + G Q ++ + +R
Sbjct: 121 LTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVS 180
Query: 582 DW-------------LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKE---KVL 625
W + + D V+ E + L+LP +E L
Sbjct: 181 KWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTL 240
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+IQ DPI+ + + + E+ GH + +I
Sbjct: 241 VIQAEHDPIAPAPHGKHL-AGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHT 293
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 80.0 bits (195), Expect = 5e-17
Identities = 47/281 (16%), Positives = 89/281 (31%), Gaps = 16/281 (5%)
Query: 412 RWNGYQIQYTVAG--KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE 469
+ NG I Y + +E ++ +HG Y ++ D+ G V G GRSE
Sbjct: 8 KVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSE 67
Query: 470 KPNIVYTE--LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
+P+ E + E V L+G+S GG A + +K +++
Sbjct: 68 EPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGG 127
Query: 528 AGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISE 587
+V + + + + N Y +
Sbjct: 128 LSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPP 187
Query: 588 MLRASYDPGVLVVLESIFSFKLSL---------PLNYLLEGFKEKVLIIQGIKDPISDSK 638
+ S + + I + + + K LI G D ++ +
Sbjct: 188 EVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNV 247
Query: 639 SKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
++ + E AG + D H E E N ++S++I
Sbjct: 248 AR--VIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFI 286
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 77.6 bits (189), Expect = 2e-16
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 19/278 (6%)
Query: 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE---HYRDNIYDIADGGNRVWAITL 462
Y R G + +Y AG +G ++L+HG GA E ++R+ I +A RV A+ +
Sbjct: 2 YVERFVNAGGVETRYLEAG-KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDM 59
Query: 463 LGFGRSEKPNIVYTE-LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
LGFG++ KP+I YT+ L V ++GNS+GG V+ L +V +
Sbjct: 60 LGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNA 119
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
+VL+ SAG V+ + L+ + +++ + +
Sbjct: 120 LVLMGSAGLVVEIHEDLRPIINYDFT-----------REGMVHLVKALTNDGFKIDDAMI 168
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641
+ + + + ++ I + + L++QG D + ++
Sbjct: 169 NSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVET-A 227
Query: 642 AMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
F + + GH E PE+ + ++
Sbjct: 228 YKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 77.6 bits (189), Expect = 2e-16
Identities = 44/262 (16%), Positives = 86/262 (32%), Gaps = 13/262 (4%)
Query: 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTE 477
I + G+ ++L+HG+G E +R +++ + + L GFGRS +
Sbjct: 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHF-TLHLVDLPGFGRSRGFGALSLA 60
Query: 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSF 537
M + ++ + +G S+GG + +A P V+++V + S+ +
Sbjct: 61 DMA-----EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEW 115
Query: 538 LQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGV 597
+ A Q L + + F+ D + +
Sbjct: 116 PGIKPDVLAGF-----QQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPE 170
Query: 598 LVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL- 656
+ VL ++ L L+ L + G D + K V M +
Sbjct: 171 VDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYIFA 229
Query: 657 DAGHCPHDEKPEEVNSIISEWI 678
A H P P E ++
Sbjct: 230 KAAHAPFISHPAEFCHLLVALK 251
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 77.3 bits (188), Expect = 2e-16
Identities = 36/269 (13%), Positives = 76/269 (28%), Gaps = 10/269 (3%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIV 474
Q+ + P ++LVHG ++ + +A + L G G + + +
Sbjct: 4 SNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD 63
Query: 475 YTELM-WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
PV L+G S+GG + ++ G
Sbjct: 64 NFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGG-HF 122
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
+ R + + + + + LI++
Sbjct: 123 GLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLG 182
Query: 594 DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVI 653
++L + + + L L+ K + + G +D + +
Sbjct: 183 SSVAHMLLATSLAKQ--PYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSGLSYSQ 235
Query: 654 RELDAGHCPHDEKPEEVNSIISEWIVTIE 682
AGH H E+P+ I+ I +I
Sbjct: 236 VA-QAGHNVHHEQPQAFAKIVQAMIHSII 263
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 77.7 bits (189), Expect = 3e-16
Identities = 44/268 (16%), Positives = 86/268 (32%), Gaps = 4/268 (1%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
++ Y G G ++L+HG+ + ++ G RV GFG S K N
Sbjct: 11 TPIELYYEDQG-SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT 69
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAI-VACLWPAVVKSVVLINSAGNVI 532
Y ++ L + V L+G S+G +A VA V + + S +
Sbjct: 70 GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFL 129
Query: 533 PEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRAS 592
+ ++ I A+ F + R + ++ +
Sbjct: 130 VQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVA 189
Query: 593 YDPGVLVVLESIFS-FKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651
+ + + + + + LI+ G KD I + F +
Sbjct: 190 IGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEA 249
Query: 652 VIREL-DAGHCPHDEKPEEVNSIISEWI 678
E+ A H +EVN+ + ++
Sbjct: 250 DYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 76.9 bits (187), Expect = 4e-16
Identities = 44/268 (16%), Positives = 87/268 (32%), Gaps = 4/268 (1%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
+G I Y G ++G ++ HG+ + + + + G RV A G GRS++P+
Sbjct: 7 DGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS 66
Query: 473 IVYT-ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531
+ + +++ + VH+ ++ GG VA P V VL+++ V
Sbjct: 67 TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPV 126
Query: 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRA 591
+ + + R +++ + + LI
Sbjct: 127 MVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQ 186
Query: 592 SYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI 651
E I +F L+ VL+ G D + E A
Sbjct: 187 GMMGAANAHYECIAAFS-ETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANA 245
Query: 652 VIREL-DAGHCPHDEKPEEVNSIISEWI 678
++ H PE +N + ++
Sbjct: 246 TLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 75.7 bits (184), Expect = 9e-16
Identities = 37/251 (14%), Positives = 73/251 (29%), Gaps = 5/251 (1%)
Query: 430 ILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIVYT-ELMWSELLRDF 487
+L+H + + G++V A+ L G + + + + LL
Sbjct: 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFL 64
Query: 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQAS 547
GE V L+G S GG +AI A + + + V NS +
Sbjct: 65 EALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 124
Query: 548 GPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSF 607
+ I+ R E A + ++I +
Sbjct: 125 PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAK 184
Query: 608 KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKP 667
+ K + + +D I + ++ + + V + H K
Sbjct: 185 RPFFTKEGYGSIKK---IYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKT 241
Query: 668 EEVNSIISEWI 678
+E+ I+ E
Sbjct: 242 KEIAEILQEVA 252
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.5 bits (184), Expect = 1e-15
Identities = 33/269 (12%), Positives = 65/269 (24%), Gaps = 20/269 (7%)
Query: 427 GPAILLVHGFGAFLEHYRDNIYDIADGGN--RVWAITLLGFGRSEKPNIVYTELMWSELL 484
+++VHG +R + I + V + L S +P + + E +
Sbjct: 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP-LWEQVQGFREAV 60
Query: 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP-AVVKSVVLINSAGN------VIPEYSF 537
+ + VHLI S GG + + V S + ++S ++ F
Sbjct: 61 VPI-MAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLF 119
Query: 538 LQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD--------DWLISEML 589
Q + + A + +
Sbjct: 120 PTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKN 179
Query: 590 RASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA 649
VL+ + E VL ++ + DS +
Sbjct: 180 FLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAI 239
Query: 650 GIVIRELDAGHCPHDEKPEEVNSIISEWI 678
H + I W+
Sbjct: 240 VRCPMA-GISHTAWHSNRTLYETCIEPWL 267
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 69.6 bits (168), Expect = 1e-13
Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 18/280 (6%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN- 472
+I Y G GP +LL+HG+ F + I +A+ V L GFG SEKP+
Sbjct: 16 PDVKIHYVREG-AGPTLLLLHGWPGFWWEWSKVIGPLAEHY-DVIVPDLRGFGDSEKPDL 73
Query: 473 ---IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529
Y+ ++ + E +++G+ + + V + +
Sbjct: 74 NDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQ 133
Query: 530 ----------NVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRER 579
+ E + QF A + ++ Y + ++ + E
Sbjct: 134 PDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEE 193
Query: 580 ADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKS 639
+ + + M + G +I + V +I G+ D
Sbjct: 194 LEVHVDNCMKPDNIHGGFNYYRANIRPDAALWT-DLDHTMSDLPVTMIWGLGDTCVPYAP 252
Query: 640 KVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+ ++ + + + D GH EKPE I
Sbjct: 253 LIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 185 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: Cryptochrome species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 66.9 bits (162), Expect = 2e-13
Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 3/181 (1%)
Query: 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILS--RYSNEMLELVIFALEDLRKSL 105
++WF++DLRV+D+ L AA + V+ L+V+ + +L L SL
Sbjct: 3 IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSSL 62
Query: 106 KEQGSDLMI-RFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDG 164
+ G+ L+ R + ++V+ A+ +F + + L +
Sbjct: 63 RSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVR 122
Query: 165 KPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDE 224
L P+ L F + + P L K+ + D
Sbjct: 123 SFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKCVADP 182
Query: 225 L 225
L
Sbjct: 183 L 183
|
| >d1np7a2 c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: 1143]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: Cryptochrome species: Synechocystis sp., pcc 6803 [TaxId: 1143]
Score = 67.0 bits (162), Expect = 3e-13
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 16/196 (8%)
Query: 47 AVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR-------YSNEMLELVIFAL 98
++WF+ DLR+ DH L A K A+ +Y +D R ++ + ++
Sbjct: 8 VLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSV 67
Query: 99 EDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK 158
++L +SL++ G+ L++ G E VI ++ +++ A +++ EV + + + L
Sbjct: 68 QNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTI 127
Query: 159 VSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRK--------LQRPLTSPILPPTLAGA 210
+ + P ++ DLP +FRK ++ +P
Sbjct: 128 LGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSPNI 187
Query: 211 KLEADWGPLPTFDELK 226
KLE P F ++
Sbjct: 188 KLELTAPPPEFFPQIN 203
|
| >d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]} Length = 202 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Synechococcus elongatus [TaxId: 32046]
Score = 66.6 bits (161), Expect = 4e-13
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 48 VIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKS 104
+ W ++DLR+ D++GL AA ++ L+ D +IL + + + L++L++
Sbjct: 4 LFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQR 63
Query: 105 LKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDG 164
++ GS L++ G +++I +L ++++A +V+ +++E + R V L +
Sbjct: 64 YQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAV 123
Query: 165 KPKICLWQTPFYDIKNLNDLPVSHNEFRKL------QRPLTSPILPPTLAGAKLEA---- 214
+ L +P + + + F K P+ +P L+ +L A
Sbjct: 124 QLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDLSPEQLTAIAPL 183
Query: 215 DWGPLPTFDEL 225
LPT +L
Sbjct: 184 LLSELPTLKQL 194
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 67.2 bits (163), Expect = 1e-12
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 430 ILLVHGFGAF------LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483
++LVHG ++++ D+ G +V+ L GF + PN +L
Sbjct: 11 VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQL--LAY 68
Query: 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
++ V+LIG+S GG VA + P +V SV I +
Sbjct: 69 VKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 66.1 bits (159), Expect = 2e-12
Identities = 55/276 (19%), Positives = 94/276 (34%), Gaps = 19/276 (6%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSE 469
VAG + PA++L+HG G ++R I D+A+ V A L+GFG+SE
Sbjct: 12 GTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENF-FVVAPDLIGFGQSE 70
Query: 470 KPNIVYTELM-----WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
P +M E + E H++GNS+GG + P V L
Sbjct: 71 YPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVAL 130
Query: 525 INSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR-RERADDW 583
+ S G + + P + L+ + NF + R +
Sbjct: 131 MGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVAND 190
Query: 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643
++ + +ES+ L VL+ G +D I +
Sbjct: 191 PEVRRIQEVMFESMKAGMESLVIP------PATLGRLPHDVLVFHGRQDRIVPLDT-SLY 243
Query: 644 FKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678
+H + L GH E+ + + ++ E
Sbjct: 244 LTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHF 279
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.6 bits (159), Expect = 3e-12
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Query: 430 ILLVHGFGAF-----LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELL 484
I+L HG F ++++ + G +V+ + SE + +
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQV 64
Query: 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527
+ V+LIG+S GG + VA + P ++ S + +
Sbjct: 65 EEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 66.3 bits (160), Expect = 4e-12
Identities = 41/338 (12%), Positives = 86/338 (25%), Gaps = 66/338 (19%)
Query: 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNI------YDIADGGNRVWA 459
Y I R + G+ P L HG A ++ N+ + +AD G VW
Sbjct: 38 YILGIDRIPYGRKNSENIGR-RPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWL 96
Query: 460 ITLLGFGRSEKP------NIVYTELMWSELLRDFTVEVV--------GEPVHLIGNSIGG 505
G + + ++ + + E+ + + + +H +G+S G
Sbjct: 97 GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGT 156
Query: 506 YFVAIVACLWPAVVKSVVLINSAG--------------------NVIPEYSFLQFSNERQ 545
I P + K + + + +
Sbjct: 157 TIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHH 216
Query: 546 ASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIF 605
+ L SN + + + L + + +
Sbjct: 217 FFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWS 276
Query: 606 SFKLS---------------------LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMF 644
S +P Y L + + G D ++D +
Sbjct: 277 QAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLL 336
Query: 645 KEHCAGIVIREL-DAGHCPH---DEKPEEVNSIISEWI 678
+ I R++ H + P+ V + I +
Sbjct: 337 SKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM 374
|
| >d2j07a2 c.28.1.1 (A:2-171) DNA photolyase {Thermus thermophilus [TaxId: 274]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Thermus thermophilus [TaxId: 274]
Score = 63.0 bits (152), Expect = 4e-12
Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 11/179 (6%)
Query: 45 GSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKS 104
G ++W + DLR+ DH L+ A VV L V D + + + + LR++
Sbjct: 1 GPLLVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNN-LKTTPRRRAWFLENVRALREA 59
Query: 105 LKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDG 164
+ +G L + G + E +KA +V+A + R D + + V
Sbjct: 60 YRARGGALWVLEGLPWEKVPEAARRLKAKAVYALTSHTPYGRYR----DGRVREALPVPL 115
Query: 165 KPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFD 223
L P +L + F +L R P+ PP E G +P D
Sbjct: 116 ----HLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLPPPEALPKGPEE--GEIPRED 168
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 65.2 bits (157), Expect = 6e-12
Identities = 36/291 (12%), Positives = 75/291 (25%), Gaps = 34/291 (11%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
+ + + + G G ++++HG + + + R+ G GRS
Sbjct: 20 DRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPA-KYRIVLFDQRGSGRSTPHA 78
Query: 473 IVYTELM--WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
+ + + + + G S G A P V +VL
Sbjct: 79 DLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138
Query: 531 VIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPT------RRERADDWL 584
E + + + + T R A W
Sbjct: 139 RRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWS 198
Query: 585 ISEMLRASYDPGV-LVVLESIFSFKLSLP-------------------LNYLLEGFKEKV 624
+ E + V F L+ L
Sbjct: 199 VWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPG 258
Query: 625 LIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSII 674
+I+ G D + +S + + ++ +GH + PE V++++
Sbjct: 259 VIVHGRYDVVCPLQSAWDL-HKAWPKAQLQISPASGHSAFE--PENVDALV 306
|
| >d1dnpa2 c.28.1.1 (A:1-200) DNA photolyase {Escherichia coli [TaxId: 562]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Escherichia coli [TaxId: 562]
Score = 60.4 bits (145), Expect = 5e-11
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 18/191 (9%)
Query: 47 AVIWFKQDLRVDDHLGLVAASKYQA--VVPLYVFDHRILS--RYSNEMLELVIFALEDLR 102
++WF+QDLR+ D+L L AA + + V+ LY+ R + S EL+ L L+
Sbjct: 3 HLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQ 62
Query: 103 KSLKEQGSDLMIRFG----RVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAK 158
+L E+G L+ R +++++ E T +F + E + R V+ L
Sbjct: 63 IALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRN 122
Query: 159 VSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRK------LQRPLTSPILPPTLAGAKL 212
V + P + +++ F+ + P + +
Sbjct: 123 VVCEGFDD--SVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGSI 180
Query: 213 EADWGPLPTFD 223
E P T +
Sbjct: 181 EPS--PSITLN 189
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 61.8 bits (148), Expect = 7e-11
Identities = 35/293 (11%), Positives = 65/293 (22%), Gaps = 44/293 (15%)
Query: 410 IWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDN-------IYDIADGGNRVWAITL 462
+ Y + I L+HG + G + I
Sbjct: 41 VTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQ 100
Query: 463 LGFGRSEKPNIVYTELMWSELLRDF--TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVK 520
G GRS + + + G G + V
Sbjct: 101 SGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQA 160
Query: 521 SVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERA 580
L P LG+ N+S + T
Sbjct: 161 QAELWQQM-------------------VPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSH 201
Query: 581 DDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDP------- 633
I A+ +P + + S+ + P + VL++ G
Sbjct: 202 SQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPL-TSIPVLVVFGDHIEEFPRWAP 260
Query: 634 -ISDSKSKVAMFKEHCAGIVIREL------DAGHCPHDEKP-EEVNSIISEWI 678
+ + + + L H ++ +V +I +WI
Sbjct: 261 RLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI 313
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 60.3 bits (144), Expect = 2e-10
Identities = 38/290 (13%), Positives = 73/290 (25%), Gaps = 33/290 (11%)
Query: 414 NGYQIQYTVAG-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472
+G++I + ++G G + +HG + +V G GRS
Sbjct: 20 DGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPE-RYKVLLFDQRGCGRSRPHA 78
Query: 473 IVYTELM--WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530
+ + E + G S G A P V +VL
Sbjct: 79 SLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 138
Query: 531 VIPEYS------FLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584
+F E+ L + + E A W
Sbjct: 139 RKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWS 198
Query: 585 ISEMLRASYDPGVLVVLESIFSFKLSLP-------------------LNYLLEGFKEKVL 625
+ E + P F L+ L + +
Sbjct: 199 VWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAV 258
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSII 674
I+ G D ++ + + + + AGH + P ++ ++
Sbjct: 259 IVHGRYDMACQVQNAWDL-AKAWPEAELHIVEGAGHSYDE--PGILHQLM 305
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 49.4 bits (117), Expect = 6e-08
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
G + + G +GP +LLV + G + + L G+GR+E P +
Sbjct: 9 YGLNLVFDRVG-KGPPVLLVA-------EEASRWPEALPEGYAFYLLDLPGYGRTEGPRM 60
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGG----YFVAI-VACLWPAVVKSVVLINSA 528
+ + F V + ++ +G + A+ + L V+ +++S
Sbjct: 61 APE--ELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAEVLSSK 118
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 51.8 bits (122), Expect = 8e-08
Identities = 33/260 (12%), Positives = 71/260 (27%), Gaps = 33/260 (12%)
Query: 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRD 486
A+LL+HGF R + G A G G + + W + + +
Sbjct: 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMN 70
Query: 487 ---FTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNE 543
F E + + G S+GG F + P A I +
Sbjct: 71 GYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIV---TMCAPMYIKSEETMYEGVL 127
Query: 544 RQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLES 603
A + + + + + + + L Y P +V
Sbjct: 128 EYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARH 187
Query: 604 IFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPH 663
I + I ++ ++ +GH
Sbjct: 188 DEMINPD---------------SANIIYNEIESPVKQIKWYE-----------QSGHVIT 221
Query: 664 -DEKPEEVNSIISEWIVTIE 682
D++ ++++ I ++ +++
Sbjct: 222 LDQEKDQLHEDIYAFLESLD 241
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 49.9 bits (118), Expect = 1e-07
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485
E +++VHG G ++ + G + + F N + S ++
Sbjct: 1 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGP-VLSRFVQ 59
Query: 486 DFTVEVVGEPVHLIGNSIGGYFV--AIVACLWPAVVKSVVLINSA 528
E + V ++ +S+GG I V +VV + A
Sbjct: 60 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGA 104
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 50.1 bits (119), Expect = 4e-07
Identities = 19/139 (13%), Positives = 32/139 (23%), Gaps = 8/139 (5%)
Query: 415 GYQIQYTVAGKEGPAILLVHGFGAF-LEHYRDNIYD-IADGGNRVWAITLLGFGRSEKPN 472
G Q ILLV G G + + N G I+ F ++
Sbjct: 19 GLTCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQV 78
Query: 473 IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAG 529
+ + ++ S GG +P + V ++
Sbjct: 79 NTEY---MVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135
Query: 530 NVIPEYSFLQFSNERQASG 548
L S
Sbjct: 136 KGTVLAGPLDALAVSAPSV 154
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 49.4 bits (116), Expect = 5e-07
Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 14/127 (11%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
G + + +L +HG EH + A+ G + A G E P
Sbjct: 11 AGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPP 70
Query: 474 VYTELMWSELLRDFTV--------------EVVGEPVHLIGNSIGGYFVAIVACLWPAVV 519
+ E + + G P+ L G S+G + ++
Sbjct: 71 SSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPR 130
Query: 520 KSVVLIN 526
+ I
Sbjct: 131 GVLAFIG 137
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 8e-07
Identities = 39/305 (12%), Positives = 76/305 (24%), Gaps = 40/305 (13%)
Query: 394 MSLRSLRSNEGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADG 453
++LRSL N + R N +V E P + LVH + ++
Sbjct: 1 VNLRSLLVNP--EGPTLMRLN------SVQSSERP-LFLVHPIEGSTTVFHSLASRLSI- 50
Query: 454 GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513
+ + + + + + P + G S G +
Sbjct: 51 --PTYGLQCTRAAPLDSI-----HSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCS 103
Query: 514 LWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCY 573
A NS + + S +L I FV+Q
Sbjct: 104 QLQAQQSPAPTHNS---LFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFT 160
Query: 574 PTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKV--------- 624
R + L+ + ++ L++ F K+
Sbjct: 161 DMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPK 220
Query: 625 --------LIIQGIKDPISDSKSKVAMFKEHCAG-IVIRELDAGH--CPHDEKPEEVNSI 673
L+ + + C G + + ++ H E + SI
Sbjct: 221 AKYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESIISI 280
Query: 674 ISEWI 678
I +
Sbjct: 281 IHSSL 285
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 28/280 (10%), Positives = 64/280 (22%), Gaps = 52/280 (18%)
Query: 414 NGYQIQYTV------AGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGR 467
NG ++ + IL+ GF ++H+ ++ G V+ L
Sbjct: 13 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVG 72
Query: 468 SEKPNIVYTELMWSELLRD------FTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKS 521
+ E + + + + LI S+ V +
Sbjct: 73 LSSGS--IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVIS--DLELSF 128
Query: 522 VVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581
++ N+ L YL L I +
Sbjct: 129 LITAVGVVNLRDTLE-----------------KALGFDYLSLPIDELPNDLDFEGHKLGS 171
Query: 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD---PISDSK 638
+ + + +D L L+ + ++ D +
Sbjct: 172 EVFVRDCFEHHWD-------------TLDSTLDKVAN-TSVPLIAFTANNDDWVKQEEVY 217
Query: 639 SKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
+A + + + H E + +
Sbjct: 218 DMLAHIRTGHCKLYSLL-GSSHDLG-ENLVVLRNFYQSVT 255
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 47.0 bits (110), Expect = 5e-06
Identities = 33/311 (10%), Positives = 87/311 (27%), Gaps = 43/311 (13%)
Query: 406 YSTRIWRWNGYQIQYTVAG---KEGPAILLVHGFGAFLEHYRDNIYDIADGGN------R 456
++T I G I + ++ I L+HG+ + + +
Sbjct: 85 FTTEI---EGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFH 141
Query: 457 VWAITLLGFGRSEKPNIV--YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514
+ +L G+ S P + + + + ++ ++ ++I G FV + +
Sbjct: 142 LVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGV 201
Query: 515 WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYP 574
K+V L A PE ++ + + G R+ + +
Sbjct: 202 GFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIG 261
Query: 575 ---------------------TRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPL 613
+ + ++ + + + +
Sbjct: 262 HVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASA 321
Query: 614 NYLLEGFKEK------VLIIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKP 667
+++ KD +S +A + GH E+P
Sbjct: 322 PNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNLVFFRDH--AEGGHFAALERP 379
Query: 668 EEVNSIISEWI 678
E+ + ++ ++
Sbjct: 380 RELKTDLTAFV 390
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 8/123 (6%)
Query: 414 NGYQIQYTVAGKEG----PAILLVHGFGAFLEHYRDN--IYDIADGGNRVWAITLLGFGR 467
G + + A ++LL+HG E +++ ++ +A G R AI L G G
Sbjct: 14 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGH 73
Query: 468 SEKP--NIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525
S++ EL L + P +I S+ G + + + V +
Sbjct: 74 SKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPV 133
Query: 526 NSA 528
Sbjct: 134 API 136
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.001
Identities = 11/53 (20%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 626 IIQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWI 678
I+ G +DP+ + + + ++++ AGH + +KPEE ++ + +++
Sbjct: 155 IVYGDQDPMGQTSFEHLKQLPNHRVLIMK--GAGHPCYLDKPEEWHTGLLDFL 205
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/268 (9%), Positives = 65/268 (24%), Gaps = 48/268 (17%)
Query: 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI 473
+G Q + + I + Y++ + L + +
Sbjct: 4 DGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQN------------LSSRLPSYKLCA-FDF 50
Query: 474 VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533
+ E P+ L G S G A + V I +
Sbjct: 51 IEEEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKK 110
Query: 534 EYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASY 593
+ G L + + + + + +
Sbjct: 111 Q------------------GVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQK-- 150
Query: 594 DPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG-IV 652
+ +S+ ++L ++ + ++ D +A ++E G
Sbjct: 151 -------THAFYSYYVNLISTGQVKA---DIDLLTSGADFDIP--EWLASWEEATTGAYR 198
Query: 653 IRELDAGHCPHDEKP--EEVNSIISEWI 678
++ H + + I+ E++
Sbjct: 199 MKRGFGTHAEMLQGETLDRNAGILLEFL 226
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 40.9 bits (94), Expect = 4e-04
Identities = 32/257 (12%), Positives = 66/257 (25%), Gaps = 19/257 (7%)
Query: 423 AGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE 482
PAI+ HG+ A + + + A G + + + G RSE +I
Sbjct: 78 KEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGW 137
Query: 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSN 542
+ + + + +++ V V + G
Sbjct: 138 MTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGG------------- 184
Query: 543 ERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLE 602
G A L + + A + E+ G
Sbjct: 185 -----GLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEV 239
Query: 603 SIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHC 661
+ L + K VL+ G+ D ++ + A + ++ GH
Sbjct: 240 QAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHE 299
Query: 662 PHDEKPEEVNSIISEWI 678
E + + +
Sbjct: 300 YIPAFQTEKLAFFKQIL 316
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 40.5 bits (94), Expect = 4e-04
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Query: 423 AGKEGPAILLVHGF--GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMW 480
G ++ G + + + G V A+ G+ E P +
Sbjct: 38 DGPGEVTVICCAGTAAISGPHEFTR-LAGALRGIAPVRAVPQPGYEEGE-PLPSSMAAVA 95
Query: 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSA 528
+ +P + G+S G +A + VVLI+
Sbjct: 96 AVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVY 146
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 13/122 (10%)
Query: 418 IQYTVAGKEG-PAILLVHGFGAFLEHYRDNIYDIADGGNRV------------WAITLLG 464
+ AG G P +L+HG G + D + + G
Sbjct: 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTG 66
Query: 465 FGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
G + ++ ++ ++ PV +G S G +A V P + + VL
Sbjct: 67 EGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVL 126
Query: 525 IN 526
++
Sbjct: 127 MH 128
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 15/117 (12%)
Query: 423 AGKEG-PAILLVHGFGAFLEHYRDNIYDIADG------------GNRVWAITLLGFGRSE 469
AGKE + L+HG G IA + + R E
Sbjct: 18 AGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFE 77
Query: 470 KPNIVYTELMWSELLRDFTVE--VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVL 524
+ +I+ ++ + + + +G S G V+ + L P +V+ L
Sbjct: 78 QKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAAL 134
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 4/122 (3%)
Query: 405 VYSTRIWRWNGYQIQYTVAGKEG--PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITL 462
V S + G I Y + +G A+++ GF A+ +A G V+ I
Sbjct: 28 VSSLVASGFGGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDT 87
Query: 463 LGFGRSEKPNI--VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVK 520
+ + L + V + ++G+S+GG A ++
Sbjct: 88 NTTLDQPDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKA 147
Query: 521 SV 522
++
Sbjct: 148 AI 149
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 37.6 bits (86), Expect = 0.004
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 55/262 (20%)
Query: 423 AGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE 482
PA++++ G + E + D G G G + + +
Sbjct: 127 GPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYT 186
Query: 483 LLRDFTVEVVGE----PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL 538
+ + + ++G S+GG + A P + +
Sbjct: 187 SAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISW-------------- 232
Query: 539 QFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVL 598
+ + D Y V
Sbjct: 233 ---------------------------------GGFSDLDYWDLETPLTKESWKYVSKVD 259
Query: 599 VVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKD--PISDSKSKVAMFKEHCAGIVIREL 656
+ E+ +L +L I+ G+ D P+S + + + +V+ +
Sbjct: 260 TLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEK- 318
Query: 657 DAGHCPHDEKPEEVNSIISEWI 678
D HC H+ +++W+
Sbjct: 319 DGDHCCHNL-GIRPRLEMADWL 339
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 691 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1np7a2 | 204 | Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1owla2 | 202 | DNA photolyase {Synechococcus elongatus [TaxId: 32 | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1u3da2 | 185 | Cryptochrome {Thale cress (Arabidopsis thaliana) [ | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d2j07a2 | 170 | DNA photolyase {Thermus thermophilus [TaxId: 274]} | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1dnpa2 | 200 | DNA photolyase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.98 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.98 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.97 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.95 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.95 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.92 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.91 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.9 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.9 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.9 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.9 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.89 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.89 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.85 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.84 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.82 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.82 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.81 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.77 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.77 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.77 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.76 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.74 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.73 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.71 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.7 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.7 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.68 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.68 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.68 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.68 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.63 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.55 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.53 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.51 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.49 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.47 | |
| d1np7a1 | 279 | Cryptochrome C-terminal domain {Synechocystis sp., | 99.46 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.44 | |
| d1owla1 | 271 | C-terminal domain of DNA photolyase {Synechococcus | 99.41 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.41 | |
| d1dnpa1 | 269 | C-terminal domain of DNA photolyase {Escherichia c | 99.39 | |
| d1u3da1 | 300 | Cryptochrome C-terminal domain {Thale cress (Arabi | 99.37 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.34 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.31 | |
| d2j07a1 | 234 | C-terminal domain of DNA photolyase {Thermus therm | 99.3 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.26 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.25 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.24 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.23 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.22 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.17 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.12 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.05 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.03 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.96 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.88 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.82 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.8 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.8 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.72 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.63 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.62 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.27 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.97 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.63 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.51 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.46 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.44 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.44 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.43 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.36 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.08 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.04 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.9 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.59 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 95.53 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.53 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.47 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.32 | |
| d1dnpa1 | 269 | C-terminal domain of DNA photolyase {Escherichia c | 90.57 | |
| d1u3da1 | 300 | Cryptochrome C-terminal domain {Thale cress (Arabi | 90.26 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 88.73 | |
| d1owla1 | 271 | C-terminal domain of DNA photolyase {Synechococcus | 87.44 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 85.81 | |
| d2j07a1 | 234 | C-terminal domain of DNA photolyase {Thermus therm | 85.27 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 85.26 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1e-37 Score=241.44 Aligned_cols=271 Identities=16% Similarity=0.061 Sum_probs=181.3
Q ss_pred EEEEEEECCEEEEEEEECCC-CCEEEEECCCCCCHHHHH-HHHHHHHCCCCEEEEECCCCCCCCCCCC---CCCCHHHHH
Q ss_conf 79999886958999980899-995999858899967799-9899985089799996899976999999---577899999
Q 005554 407 STRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYR-DNIYDIADGGNRVWAITLLGFGRSEKPN---IVYTELMWS 481 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~-~~~~~L~~~G~~Vi~~D~~G~G~S~~~~---~~~s~~~~a 481 (691)
+.+++..+|.+|+|.++|++ +|+|||+||++++...|. .++..|.++||+|+++|+||||.|+.+. ..+++++++
T Consensus 1 ~e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 80 (297)
T d1q0ra_ 1 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 80 (297)
T ss_dssp CEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred CCEEEEECCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98699989999999995379998799989998676688899999998689889998179986555545555556510332
Q ss_pred HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC------HHHHHHH
Q ss_conf 9999999892796789999693699999999958644136899537998888413332113421288------1456668
Q 005554 482 ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASG------PIRLGAQ 555 (691)
Q Consensus 482 ~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 555 (691)
+++..++++++.++++++||||||.+++.+|..+|++|+++|++++..................... .......
T Consensus 81 ~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (297)
T d1q0ra_ 81 ADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDA 160 (297)
T ss_dssp HHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHH
T ss_pred HHHCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32113232233221121032335303555411210203255798146666542035677753102332000256789999
Q ss_pred HHHHH---------HHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCC
Q ss_conf 89999---------996599999864689874001999----99999832793169999998501367616765148998
Q 005554 556 LLLFY---------LRLNISNFVKQCYPTRRERADDWL----ISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKE 622 (691)
Q Consensus 556 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 622 (691)
..... .............. ........ ............ ..............+....++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (297)
T d1q0ra_ 161 LALMNQPAEGRAAEVAKRVSKWRILSGT--GVPFDDAEYARWEERAIDHAGGVL-AEPYAHYSLTLPPPSRAAELREVTV 237 (297)
T ss_dssp HHHHHSCCCSHHHHHHHHHHHHHHHHCS--SSCCCHHHHHHHHHHHHHHTTTCC-SCCCGGGGCCCCCGGGGGGGGGCCS
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHCCCCCHHHHHCCCC
T ss_conf 9872166310257788888777651466--664107888888887653102421-0235665543200000455422378
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 5899973899999926799999982798299992-9778988559699999999999830
Q 005554 623 KVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 623 PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
||++|+|++|.+++++. .+.+.+.+++++++++ ++||+++.|+|+++++.|.+||+..
T Consensus 238 Pvlvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 238 PTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp CEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCCHHHCHHHHHHHHHHHHHHH
T ss_conf 65999868899889999-999998689988999899997611339999999999999731
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=7.9e-39 Score=248.15 Aligned_cols=272 Identities=17% Similarity=0.188 Sum_probs=187.2
Q ss_pred CCEEEEEEEECCEEEEEEEECCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 94179999886958999980899-99599985889996779998999850897999968999769999995778999999
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE 482 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~ 482 (691)
.+++.+|++++|.+|+|.++|++ +|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+...++.+++++
T Consensus 5 ~p~~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~ 83 (291)
T d1bn7a_ 5 FPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYFFDDHVR 83 (291)
T ss_dssp CCCCCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHTT-TSCEEEECCTTSTTSCCCSCCCCHHHHHH
T ss_pred CCCCCEEEEECCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 89997589989989999996789998699989999787899999999846-98899981798745555543210367777
Q ss_pred HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHH
Q ss_conf 999999892796789999693699999999958644136899537998888413332113421288-1456668899999
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASG-PIRLGAQLLLFYL 561 (691)
Q Consensus 483 di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 561 (691)
++..++++++.++++++||||||.+++.++.++|++++++|++++..................... ......... ...
T Consensus 84 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 162 (291)
T d1bn7a_ 84 YLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELI-IDQ 162 (291)
T ss_dssp HHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHH-TTS
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 7765654420345456555655524689987388613455550356677640234444456778775314677765-445
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH-CCCC--C--------CCHHHHHCCCCCCEEEEEEC
Q ss_conf 96599999864689874001999999998327931699999985-0136--7--------61676514899858999738
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIF-SFKL--S--------LPLNYLLEGFKEKVLIIQGI 630 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~--------~~~~~~l~~i~~PvLiI~G~ 630 (691)
............. ............................ .... . ......+.++++|+++|+|+
T Consensus 163 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 239 (291)
T d1bn7a_ 163 NAFIEGVLPKCVV---RPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGT 239 (291)
T ss_dssp CHHHHTHHHHTCS---SCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE
T ss_pred HHHHHHHHHHHCC---CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 6667766543024---5303788999998722613467888889886532110001234455666663178877999817
Q ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999926799999982798299992-9778988559699999999999830
Q 005554 631 KDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 631 ~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+|.+++++. .+.+.+..++++++++ ++||+++.|+|+++++.|.+||+..
T Consensus 240 ~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 240 PGVLIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp ECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred CCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH
T ss_conf 988759999-999998789988999899987217859999999999999962
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-38 Score=243.76 Aligned_cols=278 Identities=19% Similarity=0.220 Sum_probs=186.4
Q ss_pred CCCEEEEEEEE-CCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCCCHHH
Q ss_conf 99417999988-69589999808999959998588999677999899985089799996899976999999--5778999
Q 005554 403 EGVYSTRIWRW-NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELM 479 (691)
Q Consensus 403 ~~~~~~~~~~~-~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~ 479 (691)
+..+...|+++ +|.+|+|.+.| ++|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+. ..++.++
T Consensus 8 p~~~~~~~v~~~~g~~i~y~~~G-~gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 86 (322)
T d1zd3a2 8 PSDMSHGYVTVKPRVRLHFVELG-SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEV 86 (322)
T ss_dssp GGGSEEEEEEEETTEEEEEEEEC-CSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHH
T ss_pred CCCCCEEEEEECCCCEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 98874468997899789999986-79829998999878889999999998789989995154222244334323344332
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHH--HH--HHH
Q ss_conf 99999999989279678999969369999999995864413689953799888841333211342128814--56--668
Q 005554 480 WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPI--RL--GAQ 555 (691)
Q Consensus 480 ~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~ 555 (691)
+++++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++........ ............. .. ...
T Consensus 87 ~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 87 LCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNM-SPLESIKANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSS-CHHHHHHTCGGGHHHHHTTSTT
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC-CHHHHHHCCCHHHHHHHHHCCC
T ss_conf 200122222203665300465662289999987758754344179815656665532-1456542142156677641521
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--------------------------CCCCHHHHHHHHHHCCCCCHHHHHHHHHCC--
Q ss_conf 8999999659999986468987--------------------------400199999999832793169999998501--
Q 005554 556 LLLFYLRLNISNFVKQCYPTRR--------------------------ERADDWLISEMLRASYDPGVLVVLESIFSF-- 607 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 607 (691)
.............+...+.... ..................+...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 245 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 25556555578899998513543455677776530112256321145544139999999998763243101133333222
Q ss_pred CCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 3676167651489985899973899999926799999982798299992-977898855969999999999983007
Q 005554 608 KLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 608 ~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
..........+++++||++|+|++|.+++++. .+.+.+..++.+++++ ++||++++|+|+++++.|.+||++...
T Consensus 246 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 246 NWKWACKSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDAR 321 (322)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHCCCCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHCCC
T ss_conf 22310244404578887999868998879999-99999868998899989999805896999999999999865378
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=5e-38 Score=243.34 Aligned_cols=257 Identities=25% Similarity=0.294 Sum_probs=181.9
Q ss_pred EEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCH---HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 17999988695899998089999599985889996---779998999850897999968999769999995778999999
Q 005554 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE 482 (691)
Q Consensus 406 ~~~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~---~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~ 482 (691)
+..+|++.+|.+++|.+.| ++|+|||+||++++. ..|..++..|++ ||+|+++|+||||.|+.+...++.+++++
T Consensus 2 ~~~~~~~~dg~~l~y~~~G-~g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 79 (268)
T d1j1ia_ 2 YVERFVNAGGVETRYLEAG-KGQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIEYTQDRRIR 79 (268)
T ss_dssp CEEEEEEETTEEEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSSCCCHHHHHH
T ss_pred CCCEEEEECCEEEEEEEEC-CCCEEEEECCCCCCCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8676999899999999986-898299989999882277899999999855-98899972554334667743343000011
Q ss_pred HHHHHHHHHCC-CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99999989279-67899996936999999999586441368995379988884133321134212881456668899999
Q 005554 483 LLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561 (691)
Q Consensus 483 di~~ll~~l~~-~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (691)
++.++++.++. .+++++||||||.+++.+|.++|++|+++|++++++...+...... .........
T Consensus 80 ~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~--~~~~~~~~~----------- 146 (268)
T d1j1ia_ 80 HLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR--PIINYDFTR----------- 146 (268)
T ss_dssp HHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------------CCSCH-----------
T ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCHHHHHEEEECCCCCCCCCCCHHHH--HHHHHHHHH-----------
T ss_conf 2013677764214530551224532100020158476524563388766642001210--345543100-----------
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC----HHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCH
Q ss_conf 96599999864689874001999999998327931----69999998501367616765148998589997389999992
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYDPG----VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDS 637 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~ 637 (691)
............. .................... ..................+.++++++|+++|+|++|.++++
T Consensus 147 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~ 224 (268)
T d1j1ia_ 147 -EGMVHLVKALTND-GFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV 224 (268)
T ss_dssp -HHHHHHHHHHSCT-TCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred -HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCH
T ss_conf -1367888887642-03343345677777664210000002222211012322100445753799889997178888799
Q ss_pred HHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6799999982798299992-977898855969999999999983
Q 005554 638 KSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+. .+.+.+..++++++++ ++||++++|+|+++++.|.+||.+
T Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 225 ET-AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp HH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 99-99999868998899989999704896999999999999747
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.2e-37 Score=237.80 Aligned_cols=266 Identities=15% Similarity=0.113 Sum_probs=183.4
Q ss_pred EEEE-CCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9988-695899998089999599985889996779998999850897999968999769999995778999999999999
Q 005554 410 IWRW-NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 410 ~~~~-~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll 488 (691)
|+++ ||.+|+|...| ++|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+...++..++++++.+++
T Consensus 2 ~~~t~dG~~l~y~~~G-~g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l 80 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG-QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLL 80 (274)
T ss_dssp EEECTTSCEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred EEECCCCCEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 6987699889999987-898099989999887899999999997899899984899722445433232015688888788
Q ss_pred HHHCCCCEEEEEECHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 89279678999969369999999995-86441368995379988884133321134212881456668899999965999
Q 005554 489 VEVVGEPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 489 ~~l~~~~v~lvGhS~GG~ial~~A~~-~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
++++.++++++||||||.+++.++++ .|++|++++++++................ ........... ..........
T Consensus 81 ~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~ 157 (274)
T d1a8qa_ 81 TDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP--DEVFDALKNGV-LTERSQFWKD 157 (274)
T ss_dssp HHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC--HHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCHHH--HHHHHHHHHHH-HHHHHHHHHH
T ss_conf 77543320113445656067888888640220047898026752022220310104--78999998655-5566777666
Q ss_pred HHHHHCCCC--CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 998646898--740019999999983279316999999850136761676514899858999738999999267999999
Q 005554 568 FVKQCYPTR--RERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK 645 (691)
Q Consensus 568 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~ 645 (691)
.....+... ............................ ......+....++++++|+++|+|++|.+++.+...+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~ 236 (274)
T d1a8qa_ 158 TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCV-DAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSA 236 (274)
T ss_dssp HHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHH-HHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 566654024641022366777777765201323213478-7751310478887326535410237898759999999999
Q ss_pred HHCCCCEEEEE-CCCCCCCC--CCHHHHHHHHHHHHHH
Q ss_conf 82798299992-97789885--5969999999999983
Q 005554 646 EHCAGIVIREL-DAGHCPHD--EKPEEVNSIISEWIVT 680 (691)
Q Consensus 646 ~~~~~~~~~~~-~agH~~~~--e~pe~v~~~I~~fL~~ 680 (691)
+..++++++++ ++||++++ ++|+++++.|.+||++
T Consensus 237 ~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 237 QIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 86899889998989985111556999999999999783
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=6e-37 Score=236.85 Aligned_cols=273 Identities=16% Similarity=0.121 Sum_probs=188.5
Q ss_pred CCEEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC----CCCCHHH
Q ss_conf 941799998869589999808999959998588999677999899985089799996899976999999----5778999
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN----IVYTELM 479 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~----~~~s~~~ 479 (691)
..++..+++++|.+|+|...| ++|+|||+||++++...|..++..|.+ +|+|+++|+||+|.|+... ..+++++
T Consensus 6 ~~~~~~~~~~~~~~l~y~~~G-~gp~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 83 (293)
T d1ehya_ 6 EDFKHYEVQLPDVKIHYVREG-AGPTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKYSLDK 83 (293)
T ss_dssp GGSCEEEEECSSCEEEEEEEE-CSSEEEEECCSSCCGGGGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGGCHHH
T ss_pred CCCCCEEEEECCEEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 888626999799999999988-998299989998788899999999856-988999657766687543454432232024
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH-HHHHHH---HHHCCCHHHHHH-
Q ss_conf 999999999892796789999693699999999958644136899537998888413-332113---421288145666-
Q 005554 480 WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYS-FLQFSN---ERQASGPIRLGA- 554 (691)
Q Consensus 480 ~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~- 554 (691)
+++++.+++++++.++++++||||||.+++.++.++|+++.++|++++......... ...... ............
T Consensus 84 ~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (293)
T d1ehya_ 84 AADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEV 163 (293)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 56677765543176421000001342100000245752011256640257655401210001245556654201015655
Q ss_pred -HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHH-H---HHHHCCCCCCCHHHHHCCCCCCEEEEEE
Q ss_conf -8899999965999998646898740019999999983279316999-9---9985013676167651489985899973
Q 005554 555 -QLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVV-L---ESIFSFKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 555 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
.............++..+.. ......................... . ..................+++|+++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G 242 (293)
T d1ehya_ 164 VGSSREVCKKYFKHFFDHWSY-RDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWG 242 (293)
T ss_dssp HTSCHHHHHHHHHHHHHHTSS-SSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEE
T ss_pred HCCCHHHHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf 112066777888876530034-6433418888765301346401343321111102210000023343204786699996
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 899999926799999982798299992-97789885596999999999998
Q 005554 630 IKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~ 679 (691)
++|.+++.+...+.+++..++.+++++ ++||++++|+|+++++.|.+|++
T Consensus 243 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 243 LGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHC
T ss_conf 899876979999999986899789998999970489799999999999509
|
| >d1np7a2 c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: Cryptochrome species: Synechocystis sp., pcc 6803 [TaxId: 1143]
Probab=100.00 E-value=3.7e-38 Score=244.11 Aligned_cols=157 Identities=23% Similarity=0.413 Sum_probs=143.1
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHC-CCEEEEEEECCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 7379998399887699989998838-9839999977842022-------7964899999999999999984599289998
Q 005554 45 GSAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR-------YSNEMLELVIFALEDLRKSLKEQGSDLMIRF 116 (691)
Q Consensus 45 ~~~l~Wfr~dlRl~DN~aL~~A~~~-~~~~~~~~~~~~~~~~-------~~~~~~~f~~~~l~~l~~~l~~~g~~l~~~~ 116 (691)
.++|||||||||++||+||.+|++. .+|++|||+||+++.. .|.+|.+|+++||.+|+++|+++|++|+++.
T Consensus 6 ~~~lvWfr~DLRl~DN~aL~~A~~~~~~vi~vyi~dp~~~~~~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~g~~L~v~~ 85 (204)
T d1np7a2 6 PTVLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTT 85 (204)
T ss_dssp CEEEEEESSCCCSTTCHHHHHHHHTTSEEEEEEEECGGGGSBCTTSCBSSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 96899948987402079999999659948999997825750754001213689999999999999999886030356655
Q ss_pred CCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCC----CCCCCCHHHHH
Q ss_conf 78699999999980986899934148349999999999976137779975267617630015898----99994605588
Q 005554 117 GRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR 192 (691)
Q Consensus 117 g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~ 192 (691)
|++.++|.+|+++++|++||+|++|+++++++|.+|.+.|.+.|| .++.+++++|++|+++ +++|++||+|+
T Consensus 86 G~~~~~l~~l~~~~~i~~V~~n~~~~~~e~~rd~~v~~~l~~~~i----~~~~~~~~~L~~p~~l~~~~~~~~~vFTpFr 161 (204)
T d1np7a2 86 GLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGI----EAKGYWGSTLCHPEDLPFSIQDLPDLFTKFR 161 (204)
T ss_dssp SCHHHHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHHHHHTC----EEEEECCSSSSCGGGSSSCGGGCCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCEE----EEEECCCCCCCCHHHCCCCCCCCCCCCHHHH
T ss_conf 335899999999850011011113458999999877553113304----6675157653485025579999985561999
Q ss_pred HHCCCC----CCCCCCC
Q ss_conf 501256----8997899
Q 005554 193 KLQRPL----TSPILPP 205 (691)
Q Consensus 193 ~~~~~~----~~p~~~~ 205 (691)
|++... ..+.+.|
T Consensus 162 k~~e~~~~~~~~~~~~p 178 (204)
T d1np7a2 162 KDIEKKKISIRPCFFAP 178 (204)
T ss_dssp HHHHTTTCCCCCCCCCC
T ss_pred HHHHHCCCCCCCCCCCH
T ss_conf 99986668878876680
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=2e-37 Score=239.78 Aligned_cols=265 Identities=16% Similarity=0.147 Sum_probs=175.2
Q ss_pred CCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 69589999808999959998588999677999899985089799996899976999999577899999999999989279
Q 005554 414 NGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG 493 (691)
Q Consensus 414 ~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~ 493 (691)
.+++|+|...| ++|+|||+||++++...|..++..|.+.||+|+++|+||||.|+.+...++++++++++.+++++++.
T Consensus 11 ~~v~i~y~~~G-~g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l~~ 89 (279)
T d1hkha_ 11 TPIELYYEDQG-SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLDL 89 (279)
T ss_dssp EEEEEEEEEES-SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 72899999976-68869998999988789999999999789989997124517765345321113555666655431376
Q ss_pred CCEEEEEECHHH-HHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 678999969369-999999995864413689953799888841333-211342128814566688999999659999986
Q 005554 494 EPVHLIGNSIGG-YFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL-QFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 494 ~~v~lvGhS~GG-~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
++++++|||||| .++..++..+|++|.++|++++........... .................................
T Consensus 90 ~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (279)
T d1hkha_ 90 RDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNL 169 (279)
T ss_dssp CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTH
T ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 75311022324320133210123343221688603477432220122210688888888753100566666666543022
Q ss_pred HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC-CCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 4689874001999999998327931699999985013-676167651489985899973899999926799999982798
Q 005554 572 CYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFK-LSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650 (691)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~ 650 (691)
. ........+.......................... ........++.+++|+++|+|++|.+++.+...+.+.+..++
T Consensus 170 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~ 248 (279)
T d1hkha_ 170 D-ENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE 248 (279)
T ss_dssp H-HHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTT
T ss_pred C-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf 1-234554444444556644202221344333122100212230121046886589972778764989999999986899
Q ss_pred CEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 299992-977898855969999999999983
Q 005554 651 IVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 651 ~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
++++++ ++||+++.|+|+++++.|.+||++
T Consensus 249 ~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 249 ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 8899989999714886999999999999784
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.2e-37 Score=237.76 Aligned_cols=264 Identities=16% Similarity=0.173 Sum_probs=180.4
Q ss_pred EEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99988695899998089999599985889996779998999850897999968999769999995778999999999999
Q 005554 409 RIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll 488 (691)
..-..++.+|+|.+.| ++|+|||+||++++...|..++..|.++||+|+++|+||||.|+.....++++++++++.+++
T Consensus 6 ~~~~~~~v~i~y~~~G-~G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l 84 (277)
T d1brta_ 6 GQENSTSIDLYYEDHG-TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVL 84 (277)
T ss_dssp EEETTEEEEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred ECCCCCCEEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 2576896899999985-488699989999887899999999996899899981799876665443221012344566654
Q ss_pred HHHCCCCEEEEEECHHH-HHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH---HHHH
Q ss_conf 89279678999969369-9999999958644136899537998888413332113421288145666889999---9965
Q 005554 489 VEVVGEPVHLIGNSIGG-YFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY---LRLN 564 (691)
Q Consensus 489 ~~l~~~~v~lvGhS~GG-~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 564 (691)
++++.++++++|||||| .++..++..+|++|+++|++++............. ............... ....
T Consensus 85 ~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T d1brta_ 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPD-----GAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp HHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTT-----CSBCHHHHHHHHHHHHHCHHHH
T ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHHHCCCHHH
T ss_conf 21576421122333320356677777652234407873577863322202221-----2346667888987652020245
Q ss_pred HHHHHHHHCC---CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 9999986468---9874001999999998327931699999985013676167651489985899973899999926799
Q 005554 565 ISNFVKQCYP---TRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641 (691)
Q Consensus 565 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 641 (691)
.......... .............................. .....+....+.++++|+++|+|++|.+++.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~ 237 (277)
T d1brta_ 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAP--TTWYTDFRADIPRIDVPALILHGTGDRTLPIENTA 237 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGG--GGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTH
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
T ss_conf 4312221124433456666677765321001003566665542--10115589998746710004762688776989999
Q ss_pred HHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999982798299992-977898855969999999999983
Q 005554 642 AMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 642 ~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+.+.+..++++++++ ++||+++.|+|+++++.|.+||++
T Consensus 238 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 238 RVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 9999868998899989999703886999999999999782
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.5e-37 Score=239.13 Aligned_cols=267 Identities=18% Similarity=0.182 Sum_probs=183.4
Q ss_pred EEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99988695899998089999599985889996779998999850897999968999769999995778999999999999
Q 005554 409 RIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll 488 (691)
+|++.||.+|+|...| ++|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+...++++++++++.+++
T Consensus 2 ~f~~~dG~~l~y~~~G-~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG-SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLI 80 (271)
T ss_dssp EEECTTSCEEEEEEES-SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 7996799599999986-898699989999887899999999986899899985643201444322222222334202565
Q ss_pred HHHCCCCEEEEEECHHHHHHH-HHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 892796789999693699999-9999586441368995379988884133321134212881456668899999965999
Q 005554 489 VEVVGEPVHLIGNSIGGYFVA-IVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 489 ~~l~~~~v~lvGhS~GG~ial-~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
+.++.++++++|||+||.++. .+|..+|+++.+++++++............... ............. .........
T Consensus 81 ~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~ 157 (271)
T d1va4a_ 81 EHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV--PLDVFARFKTELL-KDRAQFISD 157 (271)
T ss_dssp HHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSB--CHHHHHHHHHHHH-HHHHHHHHH
T ss_pred EECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 3047775234301014433322433220021457876323322234552355443--5667888877765-556666665
Q ss_pred HHHHHCCC-CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99864689-87400199999999832793169999998501367616765148998589997389999992679999998
Q 005554 568 FVKQCYPT-RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE 646 (691)
Q Consensus 568 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~ 646 (691)
+....... ........................... ........+....+.++++|+++|+|++|.+++.+...+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 236 (271)
T d1va4a_ 158 FNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVD-CVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAE 236 (271)
T ss_dssp HHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHH-HHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHH
T ss_pred HCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 211021024023334567788876542111444430-1221110024555421026532135577887799999999997
Q ss_pred HCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2798299992-977898855969999999999983
Q 005554 647 HCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 647 ~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
..++++++++ ++||++++|+|+++++.|.+||++
T Consensus 237 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 237 LIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 58998899989999703786999999999999782
|
| >d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Synechococcus elongatus [TaxId: 32046]
Probab=100.00 E-value=6.7e-38 Score=242.59 Aligned_cols=151 Identities=21% Similarity=0.381 Sum_probs=141.2
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHC-CCEEEEEEECCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
Q ss_conf 379998399887699989998838-9839999977842022--7964899999999999999984599289998786999
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENV 122 (691)
Q Consensus 46 ~~l~Wfr~dlRl~DN~aL~~A~~~-~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~l~~~l~~~g~~l~~~~g~~~~~ 122 (691)
.+|||||||||++||+||.+|++. .+|+|+||+||+++.. .|++|++|+++||.+|+++|+++|++|.++.|++.++
T Consensus 2 ~~l~Wfr~DLRl~DN~aL~~A~~~~~~v~~vyi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~g~~L~i~~G~~~~~ 81 (202)
T d1owla2 2 PILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQRYQQAGSRLLLLQGDPQHL 81 (202)
T ss_dssp CEEEEESSCCCSSSCHHHHHHHHHCSCEEEEEEECHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEESCHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
T ss_conf 99999799875212799999996699699999986438535015677899999999999876630466417998520010
Q ss_pred HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCC----CCCCCCHHHHHHHCCCC
Q ss_conf 99999980986899934148349999999999976137779975267617630015898----99994605588501256
Q 005554 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL 198 (691)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~~~~~~ 198 (691)
+.++++++++++|++|++|+++++++|..+.+.|.+.+| .++.+++++|++|+++ |++|++||+|+|++...
T Consensus 82 l~~l~~~~~i~~v~~~~~~~~~~~~rd~~i~~~~~~~~i----~~~~~~~~~L~~p~~v~~~~g~~~~vFTpF~k~~~~~ 157 (202)
T d1owla2 82 IPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGI----RAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQ 157 (202)
T ss_dssp HHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHHHHTTC----EEEEECCSSSSCTTTCCCTTSCCCSSHHHHHHHHHHS
T ss_pred CHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 011201234422578630540232578877444432233----2201241211375531479998014349999999856
Q ss_pred CC
Q ss_conf 89
Q 005554 199 TS 200 (691)
Q Consensus 199 ~~ 200 (691)
..
T Consensus 158 ~~ 159 (202)
T d1owla2 158 PK 159 (202)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.8e-36 Score=232.84 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=178.6
Q ss_pred EEEEEECCEEEEEEEECCCCCEEEEECCCCCCHH---HHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHH
Q ss_conf 9999886958999980899995999858899967---7999899985089799996899976999999-57789999999
Q 005554 408 TRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE---HYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSEL 483 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~---~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~d 483 (691)
.+++.++|.+++|.+.| ++|+|||+||++++.. .|..++..|.+ ||+|+++|+||||.|+.+. ..++.++++++
T Consensus 5 ~~~i~~~G~~~~Y~~~G-~G~pvvllHG~~~~~~~~~~~~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 82 (271)
T d1uk8a_ 5 GKSILAAGVLTNYHDVG-EGQPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVGFGFTDRPENYNYSKDSWVDH 82 (271)
T ss_dssp CEEEEETTEEEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCTTCCCCHHHHHHH
T ss_pred CCEEEECCEEEEEEEEE-ECCEEEEECCCCCCCCHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 87899899799999982-188499989999994178999999999847-9989999479897766434432110001001
Q ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999892796789999693699999999958644136899537998888413332113421288145666889999996
Q 005554 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRL 563 (691)
Q Consensus 484 i~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (691)
+..++++++.++++++||||||.+++.+|.++|+++.++|++++.+.............. .......
T Consensus 83 ~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~-~~~~~~~------------ 149 (271)
T d1uk8a_ 83 IIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWG-YTPSIEN------------ 149 (271)
T ss_dssp HHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHT-CCSCHHH------------
T ss_pred HHHHHHHHCCCCCEEEECCCCCEEEHHHHHHHHCCCHHEEECCCCCCCCCCHHHHHHHHH-CCCHHHH------------
T ss_conf 223344304777257531456541067888630222101312567776310135566640-3402677------------
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC------CCCCHHHHHCCCCCCEEEEEECCCCCCCH
Q ss_conf 599999864689874001999999998327931699999985013------67616765148998589997389999992
Q 005554 564 NISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFK------LSLPLNYLLEGFKEKVLIIQGIKDPISDS 637 (691)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~PvLiI~G~~D~~vp~ 637 (691)
......... .................................. ........+.++++|+|+|+|++|.++|+
T Consensus 150 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 227 (271)
T d1uk8a_ 150 -MRNLLDIFA-YDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL 227 (271)
T ss_dssp -HHHHHHHHC-SCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred -HHHHHHHHH-HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCH
T ss_conf -889999875-400013067777777652166689999862203566665410020999975024305895378988599
Q ss_pred HHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6799999982798299992-977898855969999999999983
Q 005554 638 KSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+. .+.+.+..++++++++ ++||+++.|+|+++++.|.+||++
T Consensus 228 ~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 228 SS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HH-HHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred HH-HHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHC
T ss_conf 99-99999868998899989999725897999999999999952
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=8.9e-37 Score=235.82 Aligned_cols=263 Identities=17% Similarity=0.151 Sum_probs=181.8
Q ss_pred EEECCEEEEEEEECCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9886958999980899-995999858899967799989998508979999689997699999957789999999999998
Q 005554 411 WRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV 489 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~ 489 (691)
.+.||.+|+|..+|++ +|+|||+||++++...|..++..|.++||+|+++|+||||.|+.+...++.+++++++.++++
T Consensus 4 ~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 83 (275)
T d1a88a_ 4 TTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTE 83 (275)
T ss_dssp ECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred EECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 90389899999955899984999899988878999999999968998999856433134433233211112222222232
Q ss_pred HHCCCCEEEEEECH-HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH---HHHH
Q ss_conf 92796789999693-6999999999586441368995379988884133321134212881456668899999---9659
Q 005554 490 EVVGEPVHLIGNSI-GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL---RLNI 565 (691)
Q Consensus 490 ~l~~~~v~lvGhS~-GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 565 (691)
+++.++++++|||+ ||.+++.+|..+|++|+++|++++........... ................. ....
T Consensus 84 ~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T d1a88a_ 84 ALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN------PDGLPLEVFDEFRAALAANRAQFY 157 (275)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTB------TTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 33443222232102454201011235862022333202453333210001------111014455555554444457787
Q ss_pred HHHHHH-HCC--CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 999986-468--98740019999999983279316999999850136761676514899858999738999999267999
Q 005554 566 SNFVKQ-CYP--TRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVA 642 (691)
Q Consensus 566 ~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~ 642 (691)
...... ... ...........+............... .........+....+.++++|+++|+|++|.++|.+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~ 236 (275)
T d1a88a_ 158 IDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHY-ECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAP 236 (275)
T ss_dssp HHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHH-HHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH
T ss_conf 753344433115320467789998888764010157788-8898864001267787630334315307888759899999
Q ss_pred HHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99982798299992-977898855969999999999983
Q 005554 643 MFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 643 ~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.+.+..++++++++ ++||++++|+|+++++.|.+||+.
T Consensus 237 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 237 KSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 999868998899989999733786999999999999749
|
| >d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: Cryptochrome species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.1e-38 Score=242.09 Aligned_cols=150 Identities=17% Similarity=0.211 Sum_probs=139.4
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CCHHHH
Q ss_conf 3799983998876999899988389839999977842022--7964899999999999999984599289998-786999
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRF-GRVENV 122 (691)
Q Consensus 46 ~~l~Wfr~dlRl~DN~aL~~A~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~l~~~l~~~g~~l~~~~-g~~~~~ 122 (691)
++|||||||||++||+||.+|++.+++++|||+||.++.. .|.++.+|+++||.+|+++|+++|+.|+++. |++.++
T Consensus 1 ~SlvWFR~DLRl~DN~aL~~A~~~~~vi~vfi~dp~~~~~~~~~~~~~~fl~~sL~~L~~~L~~~g~~L~v~~~g~~~~~ 80 (185)
T d1u3da2 1 CSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSSLRSLGTCLITKRSTDSVAS 80 (185)
T ss_dssp CEEEEESSCCCSTTCHHHHHHHHHSCEEEEEEECGGGGTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH
T ss_conf 98999899777041899999996799899999734474235727789999999999988888743886247632542999
Q ss_pred HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCC----CCCCCCHHHHHHHCCCC
Q ss_conf 99999980986899934148349999999999976137779975267617630015898----99994605588501256
Q 005554 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL 198 (691)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~~~~~~ 198 (691)
|.++++++++++|++|++|++++++||.++.+.|.+.|| .++.+++++|++|+++ |++|++||+|+|+|...
T Consensus 81 l~~l~~~~~i~~v~~n~~~~~~e~~rd~~v~~~l~~~gi----~~~~~~~~~L~~p~~i~~~~g~~y~vFTpF~k~~~~~ 156 (185)
T d1u3da2 81 LLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGI----AVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSM 156 (185)
T ss_dssp HHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHHHTTTC----EEEEECCSCSSCGGGCCCSSSCCCSSHHHHHHHHHTC
T ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 999998519726988505308889889988788997498----4143577400274433467999986328999999847
Q ss_pred C
Q ss_conf 8
Q 005554 199 T 199 (691)
Q Consensus 199 ~ 199 (691)
+
T Consensus 157 ~ 157 (185)
T d1u3da2 157 P 157 (185)
T ss_dssp S
T ss_pred C
T ss_conf 6
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.1e-36 Score=235.34 Aligned_cols=267 Identities=16% Similarity=0.111 Sum_probs=181.5
Q ss_pred EEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99988695899998089999599985889996779998999850897999968999769999995778999999999999
Q 005554 409 RIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll 488 (691)
.|.+.||.+|+|...| ++|+|||+||++++...|..++..|.++||+|+++|+||||.|+.+...++.+++++++.+++
T Consensus 2 ~f~~~dG~~i~y~~~G-~g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l 80 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG-SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLI 80 (273)
T ss_dssp EEECTTSCEEEEEEES-CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred EEEEECCCEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 7994589699999987-898399989998887899999999986899899983022176643454323210677788888
Q ss_pred HHHCCCCEEEEEECHHHHHHHH-HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8927967899996936999999-999586441368995379988884133321134212881456668899999965999
Q 005554 489 VEVVGEPVHLIGNSIGGYFVAI-VACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 489 ~~l~~~~v~lvGhS~GG~ial~-~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
++++.++.+++|||+||.++.. ++..+|++|.+++++++............... ............... .......
T Consensus 81 ~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~ 157 (273)
T d1a8sa_ 81 EHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGL--PMEVFDGIRQASLAD-RSQLYKD 157 (273)
T ss_dssp HHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSB--CHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 7337642035320357743124566554420251689730101243210033311--366666677777777-7788888
Q ss_pred HHHHHC-CC--CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf 998646-89--874001999999998327931699999985013676167651489985899973899999926799999
Q 005554 568 FVKQCY-PT--RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMF 644 (691)
Q Consensus 568 ~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~ 644 (691)
...... .. ..........+................. .......+....++++++|+++|+|++|.+++.+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~ 236 (273)
T d1a8sa_ 158 LASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDC-IKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIAS 236 (273)
T ss_dssp HHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHH-HHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 752112202440246668999999875302332455556-7775322466777750322278861788887999999999
Q ss_pred HHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 982798299992-977898855969999999999983
Q 005554 645 KEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 645 ~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+...++++++++ ++||++++|+|+++++.|.+||+.
T Consensus 237 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~G 273 (273)
T d1a8sa_ 237 AALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp HHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred HHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHCCC
T ss_conf 9738998899989999710786999999999997299
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=3e-36 Score=232.64 Aligned_cols=259 Identities=17% Similarity=0.213 Sum_probs=175.5
Q ss_pred EECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHH---HHHHCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q ss_conf 886958999980899995999858899967799989---9985089799996899976999999-577899999999999
Q 005554 412 RWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNI---YDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDF 487 (691)
Q Consensus 412 ~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~---~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~di~~l 487 (691)
.+++.+|+|.+.| ++|+|||+||++.+...|..+. ..+.+.||+|+++|+||||.|..+. ..++...+++++.++
T Consensus 16 ~~~~~~i~y~~~G-~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~l 94 (283)
T d2rhwa1 16 GFSDFNIHYNEAG-NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (283)
T ss_dssp TEEEEEEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCC
T ss_conf 6487799999985-798299989999874588999999999997898899985788744443333344421022201122
Q ss_pred HHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 98927967899996936999999999586441368995379988884133321134212881456668899999965999
Q 005554 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISN 567 (691)
Q Consensus 488 l~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (691)
+++++.++++++||||||.+++.+|.++|++|+++|++++.+............. .... ..............
T Consensus 95 i~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~ 167 (283)
T d2rhwa1 95 MDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEG------IKLL-FKLYAEPSYETLKQ 167 (283)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHH------HHHH-HHHHHSCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH------HHHH-HHHHHHHHHHHHHH
T ss_conf 2222333333333232278999999972421046999578767721001566788------9999-98765301256899
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHH-CCCCCHH-HHH-HHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf 998646898740019999999983-2793169-999-9985013676167651489985899973899999926799999
Q 005554 568 FVKQCYPTRRERADDWLISEMLRA-SYDPGVL-VVL-ESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMF 644 (691)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~ 644 (691)
.+...... ............... ....... ... ..........+....+.++++|+++|+|++|.+++++. .+.+
T Consensus 168 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~ 245 (283)
T d2rhwa1 168 MLQVFLYD-QSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDH-GLKL 245 (283)
T ss_dssp HHHHHCSC-GGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHH-HHHH
T ss_pred HHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHH-HHHH
T ss_conf 99985215-544758999999987654555532212445442102322488885489987999857898769999-9999
Q ss_pred HHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 982798299992-977898855969999999999983
Q 005554 645 KEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 645 ~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.+..++++++++ ++||+++.|+|+++++.|.+||++
T Consensus 246 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 246 LWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHC
T ss_conf 9868998899989999714896999999999999857
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=2.4e-37 Score=239.20 Aligned_cols=270 Identities=19% Similarity=0.227 Sum_probs=177.2
Q ss_pred CCEEEEEEE----ECCEEEEEEEECCC--CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCC
Q ss_conf 941799998----86958999980899--9959998588999677999899985089799996899976999999--577
Q 005554 404 GVYSTRIWR----WNGYQIQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVY 475 (691)
Q Consensus 404 ~~~~~~~~~----~~g~~i~y~~~g~~--~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~ 475 (691)
.+++.+++. .+|.+++|.+.|++ .|+|||+||+++++..|..++..|.+.||+|+++|+||||.|+.+. ..+
T Consensus 18 ~p~~~~~~~~~~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 97 (310)
T d1b6ga_ 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDY 97 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred CCCCCCEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 99997335566687988999999168899987999899997667899998876314866887640476654332223322
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 89999999999998927967899996936999999999586441368995379988884133321134212881456668
Q 005554 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 476 s~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
+++.+++++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++....+.... ................
T Consensus 98 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 175 (310)
T d1b6ga_ 98 TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQP--AFSAFVTQPADGFTAW 175 (310)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCT--HHHHTTTSSTTTHHHH
T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCH--HHHHHHHCCHHHHHHH
T ss_conf 10001222123211102443100121102333322101120555318998676677865414--5777763100234445
Q ss_pred HHHHHH--HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH---HHHCCCC-------CCCHHHHHCCCCCC
Q ss_conf 899999--96599999864689874001999999998327931699999---9850136-------76167651489985
Q 005554 556 LLLFYL--RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLE---SIFSFKL-------SLPLNYLLEGFKEK 623 (691)
Q Consensus 556 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~l~~i~~P 623 (691)
...... ......+....... ........+.............. ....... ..........+++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (310)
T d1b6ga_ 176 KYDLVTPSDLRLDQFMKRWAPT----LTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQ 251 (310)
T ss_dssp HHHHHSCSSCCHHHHHHHHSTT----CCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSE
T ss_pred HHHHCCCHHHHHHHHHHCCCCC----CCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 4420262666666665313753----218899888764013554420000145432101222100023467764046888
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCCC-EEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999738999999267999999827982-99992-977898855969999999999983
Q 005554 624 VLIIQGIKDPISDSKSKVAMFKEHCAGI-VIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 624 vLiI~G~~D~~vp~~~~~~~~~~~~~~~-~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+++++|++|.+++++. .+.+.+..++. +++++ ++||+++.++|+.+++.|.+||++
T Consensus 252 ~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 252 TFMAIGMKDKLLGPDV-MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp EEEEEETTCSSSSHHH-HHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCCHHH-HHHHHHHCCCCCCEEEECCCCCCHHHHCHHHHHHHHHHHHHC
T ss_conf 6999837888889999-999998667996489989986734140899999999999807
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.2e-36 Score=233.46 Aligned_cols=268 Identities=19% Similarity=0.217 Sum_probs=176.9
Q ss_pred EEEEEEECCEEEEEEEECCC--CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHH
Q ss_conf 79999886958999980899--9959998588999677999899985089799996899976999999-57789999999
Q 005554 407 STRIWRWNGYQIQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSEL 483 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~~--~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~d 483 (691)
..+|++++|.+|+|...|++ +|+||++||++++...|...+..+.++||+|+++|+||||.|+.+. ..++++.++++
T Consensus 3 ~~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 82 (290)
T d1mtza_ 3 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEE 82 (290)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHH
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 26809889989999986788899759998999986277999999999789989998379972245533332222322456
Q ss_pred HHHHHHHH-CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH--
Q ss_conf 99999892-796789999693699999999958644136899537998888413332113421288145666889999--
Q 005554 484 LRDFTVEV-VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY-- 560 (691)
Q Consensus 484 i~~ll~~l-~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 560 (691)
+.++++++ +.++++++||||||.+++.+|.++|++|+++|++++....... .......................
T Consensus 83 l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (290)
T d1mtza_ 83 AEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLT---VKEMNRLIDELPAKYRDAIKKYGSS 159 (290)
T ss_dssp HHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHH---HHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCHHHHEEEEECCCCCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6543101234655310013333035666630273542055531566676421---4666432223267889998876531
Q ss_pred -------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH-----CCCCCCCHHHHHCCCCCCEEEEE
Q ss_conf -------996599999864689874001999999998327931699999985-----01367616765148998589997
Q 005554 561 -------LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIF-----SFKLSLPLNYLLEGFKEKVLIIQ 628 (691)
Q Consensus 561 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~i~~PvLiI~ 628 (691)
............... .................. .......... ......+....++++++|+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 237 (290)
T d1mtza_ 160 GSYENPEYQEAVNYFYHQHLLR-SEDWPPEVLKSLEYAERR-NVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITV 237 (290)
T ss_dssp TCTTCHHHHHHHHHHHHHHTSC-SSCCCHHHHHHHHHHHHS-SHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEEE
T ss_conf 2323566899998876654203-310007889989887656-56665202567767666410337788641651389998
Q ss_pred ECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3899999926799999982798299992-9778988559699999999999830
Q 005554 629 GIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 629 G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
|++|.+++ + ..+.+.+..++++++++ ++||++++|+|+++++.|.+||+++
T Consensus 238 G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 238 GEYDEVTP-N-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp ETTCSSCH-H-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred ECCCCCCH-H-HHHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH
T ss_conf 57888797-9-9999998789988999899998158859999999999999975
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=6.8e-36 Score=230.53 Aligned_cols=259 Identities=21% Similarity=0.240 Sum_probs=175.8
Q ss_pred EEEEEEECCEEEEEEEECCC-CCEEEEECCCCCCH---HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-----CCCH
Q ss_conf 79999886958999980899-99599985889996---779998999850897999968999769999995-----7789
Q 005554 407 STRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-----VYTE 477 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~~-~p~VIliHG~~~~~---~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-----~~s~ 477 (691)
..+.+..++.++||...|++ +|+|||+||++++. ..|..+++.|++ ||+|+++|+||||.|+.+.. ..+.
T Consensus 5 ~~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (281)
T d1c4xa_ 5 IEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWV 83 (281)
T ss_dssp EEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred EEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 99998229999999998469998799989999997678999999999847-98899994798745443344433202368
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHH-HH-HHHHHHCCCHHHHHHH
Q ss_conf 999999999998927967899996936999999999586441368995379988884133-32-1134212881456668
Q 005554 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSF-LQ-FSNERQASGPIRLGAQ 555 (691)
Q Consensus 478 ~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 555 (691)
+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.+........ .. ..........
T Consensus 84 ~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~------ 157 (281)
T d1c4xa_ 84 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRL------ 157 (281)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCH------
T ss_pred HHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC------
T ss_conf 88653101222223455520002222432332212110113330577325567656443679999876432122------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHCCCCCHHHHHH----HHHC-CCCCCCHHHHHCCCCCCEEEEEE
Q ss_conf 8999999659999986468987-4001999999998327931699999----9850-13676167651489985899973
Q 005554 556 LLLFYLRLNISNFVKQCYPTRR-ERADDWLISEMLRASYDPGVLVVLE----SIFS-FKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
......+........ ......................... .... ..........+.++++|+|+|+|
T Consensus 158 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 230 (281)
T d1c4xa_ 158 -------TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHG 230 (281)
T ss_dssp -------HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEE
T ss_pred -------CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEE
T ss_conf -------2023333331046111430356788776421450332223433467766654301111445542551489995
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899999926799999982798299992-977898855969999999999983
Q 005554 630 IKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
++|.++|++. .+.+.+..++++++++ ++||++++|+|+++++.|.+||+.
T Consensus 231 ~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 231 RQDRIVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp TTCSSSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCC
T ss_conf 8898749999-99999878998899989999705896999999999999677
|
| >d2j07a2 c.28.1.1 (A:2-171) DNA photolyase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.5e-35 Score=225.62 Aligned_cols=151 Identities=25% Similarity=0.295 Sum_probs=131.8
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 37999839988769998999883898399999778420227964899999999999999984599289998786999999
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRE 125 (691)
Q Consensus 46 ~~l~Wfr~dlRl~DN~aL~~A~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~l~~~l~~~g~~l~~~~g~~~~~l~~ 125 (691)
.+|||||||||++||+||.+|++.++++++||+|+.++. .+++|.+|+++||.+|+++|+++|+.|++++|++.++|.+
T Consensus 2 p~l~Wfr~DLRl~Dn~aL~~A~~~~~vi~vfi~d~~~~~-~~~~r~~fl~~sL~~L~~~L~~~g~~L~v~~G~~~~~l~~ 80 (170)
T d2j07a2 2 PLLVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNNLK-TTPRRRAWFLENVRALREAYRARGGALWVLEGLPWEKVPE 80 (170)
T ss_dssp CEEEEESSCCCSTTCHHHHHHHTTSCEEEEEEECHHHHS-SCHHHHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999998997760306999999966997999997054311-3577999998889999876401441045655667888999
Q ss_pred HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCC
Q ss_conf 99980986899934148349999999999976137779975267617630015898999946055885012568997899
Q 005554 126 LVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPP 205 (691)
Q Consensus 126 l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~p~~~~ 205 (691)
|+++++|++||+|++|++++++||.+|.+.+. + ..+.+++...+.+ +.+++|++||+|+|++.....|++.|
T Consensus 81 l~~~~~i~~V~~n~~~~~~~~~rd~~v~~~l~---~----~~~~l~~p~~v~~-~~~~~y~VFTpF~k~~~~~~~p~p~p 152 (170)
T d2j07a2 81 AARRLKAKAVYALTSHTPYGRYRDGRVREALP---V----PLHLLPAPHLLPP-DLPRAYRVYTPFSRLYRGAAPPLPPP 152 (170)
T ss_dssp HHHHTTCSEEEEECCCSHHHHHHHHHHHHHCS---S----CEEEECCCCSSCT-TCSSCCSSHHHHHTTCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC---C----CCEEECCCCEEEC-CCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 99985256777641410554578999876422---6----7626336686538-94899985478999986248999986
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-34 Score=223.17 Aligned_cols=254 Identities=18% Similarity=0.209 Sum_probs=166.3
Q ss_pred EEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 89999808999959998588999677999899985089799996899976999999577899999999999989279678
Q 005554 417 QIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPV 496 (691)
Q Consensus 417 ~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v 496 (691)
.|+|...|.++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+... .+++.+++ +.+..+..+++
T Consensus 1 ~i~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~-~~~~~d~~----~~~~~~~~~~~ 74 (256)
T d1m33a_ 1 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG-ALSLADMA----EAVLQQAPDKA 74 (256)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTCCSCC-CCCHHHHH----HHHHTTSCSSE
T ss_pred CEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCC-CCCCCCCC----CCCCCCCCCCE
T ss_conf 908999779998489989999887999999999837-9889998579998765545-33323333----22223466413
Q ss_pred EEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99996936999999999586441368995379988884133321134212881456668899999965999998646898
Q 005554 497 HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTR 576 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (691)
+++||||||.+++.+|.++|+++++++++++.+............... .... ..............+........
T Consensus 75 ~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 149 (256)
T d1m33a_ 75 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDV----LAGF-QQQLSDDQQRTVERFLALQTMGT 149 (256)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHH----HHHH-HHHHHHHHHHHHHHHHHTTSTTS
T ss_pred EEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 652002015799999996874240114651166545311455667899----9988-76422456789999865542143
Q ss_pred C-CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 7-400199999999832793169999998501367616765148998589997389999992679999998279829999
Q 005554 577 R-ERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIRE 655 (691)
Q Consensus 577 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 655 (691)
. ................... ..............+....++++++|+++|+|++|.++|++. .+.+.+..+++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~-~~~l~~~~~~~~~~~ 227 (256)
T d1m33a_ 150 ETARQDARALKKTVLALPMPE-VDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYI 227 (256)
T ss_dssp TTHHHHHHHHHHHHHTSCCCC-HHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGG-CC-CTTTCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH-HHHHHHHCCCCEEEE
T ss_conf 101567888777654011012-778876655411342677887545882214445677779999-999998789988999
Q ss_pred E-CCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 2-977898855969999999999983007
Q 005554 656 L-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 656 ~-~agH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
+ ++||++++|+|+++++.|.+|++++.+
T Consensus 228 i~~~gH~~~~e~p~~~~~~l~~fl~~ig~ 256 (256)
T d1m33a_ 228 FAKAAHAPFISHPAEFCHLLVALKQRVGS 256 (256)
T ss_dssp ETTCCSCHHHHSHHHHHHHHHHHHTTSCC
T ss_pred ECCCCCCHHHHCHHHHHHHHHHHHHHCCC
T ss_conf 89999803897999999999999997689
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=8.1e-35 Score=224.04 Aligned_cols=267 Identities=14% Similarity=0.129 Sum_probs=171.2
Q ss_pred EEEEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC----CCCHHHHHH
Q ss_conf 7999988695899998089999599985889996779998999850897999968999769999995----778999999
Q 005554 407 STRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI----VYTELMWSE 482 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~----~~s~~~~a~ 482 (691)
+.+|++++|.+|+|.+.| ++|+|||+||++++...|..++..|++. |+|+++|+||||.|+.+.. ........+
T Consensus 9 ~~~fi~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 86 (298)
T d1mj5a_ 9 EKKFIEIKGRRMAYIDEG-TGDPILFQHGNPTSSYLWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYAEHRD 86 (298)
T ss_dssp CCEEEEETTEEEEEEEES-CSSEEEEECCTTCCGGGGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHHHHHH
T ss_pred CCEEEEECCEEEEEEEEC-CCCCEEEECCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 877999899999999986-8983899899998888999999998359-88999968998888887654322112101233
Q ss_pred HHHHHHHH-HCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHH---HCCCHHHHHHHHHH
Q ss_conf 99999989-279678999969369999999995864413689953799888841333211342---12881456668899
Q 005554 483 LLRDFTVE-VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNER---QASGPIRLGAQLLL 558 (691)
Q Consensus 483 di~~ll~~-l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 558 (691)
++..++.. .+.++++++||||||.+++.++.++|++|.+++++++................. ............
T Consensus 87 ~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (298)
T d1mj5a_ 87 YLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQ-- 164 (298)
T ss_dssp HHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTT--
T ss_pred HHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 201322223445667179754530068999999875422432036656665420233456665554432112344443--
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC-H-HHHHHHHHCCC----------CCCCHHHHHCCCCCCEEE
Q ss_conf 99996599999864689874001999999998327931-6-99999985013----------676167651489985899
Q 005554 559 FYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPG-V-LVVLESIFSFK----------LSLPLNYLLEGFKEKVLI 626 (691)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~----------~~~~~~~~l~~i~~PvLi 626 (691)
.............. ................... . ........... ...+....+..+++|+++
T Consensus 165 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 239 (298)
T d1mj5a_ 165 --DNVFVEQVLPGLIL---RPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLF 239 (298)
T ss_dssp --TCHHHHTHHHHTSS---SCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred --HHHHHHHHCCCCCC---CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf --34556553000011---1110555555544420334556566530023310000123433200045554303414899
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9738999999267999999827982999929778988559699999999999830078
Q 005554 627 IQGIKDPISDSKSKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTIESK 684 (691)
Q Consensus 627 I~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~agH~~~~e~pe~v~~~I~~fL~~~~~~ 684 (691)
++|++|.+.+.. .+.+.+..++.+++++++||++++|+|+++++.|.+||+++...
T Consensus 240 i~g~~d~~~~~~--~~~~~~~~p~~~~~~~~~GH~~~~e~P~~v~~~i~~fl~~~~~a 295 (298)
T d1mj5a_ 240 INAEPGALTTGR--MRDFCRTWPNQTEITVAGAHFIQEDSPDEIGAAIAAFVRRLRPA 295 (298)
T ss_dssp EEEEECSSSSHH--HHHHHTTCSSEEEEEEEESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred EECCCCCCCHHH--HHHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHHHHCCC
T ss_conf 963788758699--99999878997899968987518969999999999999612545
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=2.6e-34 Score=220.96 Aligned_cols=269 Identities=14% Similarity=0.094 Sum_probs=164.9
Q ss_pred CCCCCEEEEEEEE-CCEEEEEEEECCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCCC
Q ss_conf 8999417999988-6958999980899-9959998588999677999899985089799996899976999999--5778
Q 005554 401 SNEGVYSTRIWRW-NGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYT 476 (691)
Q Consensus 401 ~~~~~~~~~~~~~-~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s 476 (691)
+..-++..+++++ +|.+|+|...|++ +++|||+||++++...|......+ ..+|+|+++|+||||.|+.+. ..++
T Consensus 6 ~~~~P~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 84 (313)
T d1azwa_ 6 PEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHD-PAKYRIVLFDQRGSGRSTPHADLVDNT 84 (313)
T ss_dssp CCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSC-TTTEEEEEECCTTSTTSBSTTCCTTCC
T ss_pred CCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCCCHH
T ss_conf 9998987898996998699999951899988999789998863667776786-569989997132257777532222002
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH----------HHHHC
Q ss_conf 99999999999989279678999969369999999995864413689953799888841333211----------34212
Q 005554 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFS----------NERQA 546 (691)
Q Consensus 477 ~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~----------~~~~~ 546 (691)
++++++|+.+++++++.++++++||||||.+++.+|..+|++|+++|++++.............. .....
T Consensus 85 ~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
T d1azwa_ 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLN 164 (313)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999899888876332544047815773899999998653020346732434665200011111222014689999987
Q ss_pred CCHHHHHHHHHHHHHH-----------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHH---HHHH-HH--C-CC
Q ss_conf 8814566688999999-----------6599999864689874001999999998327931699---9999-85--0-13
Q 005554 547 SGPIRLGAQLLLFYLR-----------LNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLV---VLES-IF--S-FK 608 (691)
Q Consensus 547 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~--~-~~ 608 (691)
................ .....+................... ........ .... .. . ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T d1azwa_ 165 AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTG----HEDAHFALAFARIENHYFVNGGFF 240 (313)
T ss_dssp TSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHH----HTCHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC----CCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 6445555445566665404766889999987643201221002454122001----004679998767778887620222
Q ss_pred --CCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHH---HHHHHHHH
Q ss_conf --676167651489985899973899999926799999982798299992-9778988559699---99999999
Q 005554 609 --LSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEE---VNSIISEW 677 (691)
Q Consensus 609 --~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~---v~~~I~~f 677 (691)
.........+.+++|+++|+|++|.++|++ ....+.+..++++++++ ++||+++ +|+. +.+++.+|
T Consensus 241 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~-~~~~l~~~~p~a~~~~i~~aGH~~~--ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQ-SAWDLHKAWPKAQLQISPASGHSAF--EPENVDALVRATDGF 312 (313)
T ss_dssp SSTTHHHHTGGGGTTCCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSSTT--SHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCEEEEEECCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCCCC--CCHHHHHHHHHHHHH
T ss_conf 43014467665307999899987999887999-9999998789989999799999878--834999999999975
|
| >d1dnpa2 c.28.1.1 (A:1-200) DNA photolyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cryptochrome/photolyase, N-terminal domain superfamily: Cryptochrome/photolyase, N-terminal domain family: Cryptochrome/photolyase, N-terminal domain domain: DNA photolyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-34 Score=222.57 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=133.2
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHC--CCEEEEEEECCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC---
Q ss_conf 379998399887699989998838--983999997784202--2796489999999999999998459928999878---
Q 005554 46 SAVIWFKQDLRVDDHLGLVAASKY--QAVVPLYVFDHRILS--RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR--- 118 (691)
Q Consensus 46 ~~l~Wfr~dlRl~DN~aL~~A~~~--~~~~~~~~~~~~~~~--~~~~~~~~f~~~~l~~l~~~l~~~g~~l~~~~g~--- 118 (691)
++|||||||||++||+||.+|++. .+|+||||+||.++. ..|.+|++|+++||.+|+++|+++|++|+++.|+
T Consensus 2 t~LvWfRrDLRl~DN~aL~~A~~~~~~~v~~vyi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~g~~L~v~~g~~~~ 81 (200)
T d1dnpa2 2 THLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFV 81 (200)
T ss_dssp EEEEECSSCCCSTTCHHHHHHSSSTTSEEEEEEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSSHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 28999678776463799999998199938999997434641457446666567888888876643034206999806522
Q ss_pred -HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCC----CCCCCCHHHHHH
Q ss_conf -699999999980986899934148349999999999976137779975267617630015898----999946055885
Q 005554 119 -VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRK 193 (691)
Q Consensus 119 -~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~f~~ 193 (691)
+.+++.+++++++|++|++|.+|++++++||.+|.+.|. +| .++.+++++|++|+++ |++|++||+|+|
T Consensus 82 ~~~~~l~~l~~~~~i~~v~~n~~~~~~~~~rd~~v~~~l~--~i----~~~~~~~~~L~~p~~v~~~~g~~y~VFTpF~k 155 (200)
T d1dnpa2 82 ASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALR--NV----VCEGFDDSVILPPGAVMTGNHEMYKVFTPFKN 155 (200)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHCT--TS----EEEEECCSSSSCTTSSCCTTSCCCSSHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH--HH----CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHH
T ss_conf 2125789999861972899742420889989999999853--40----12456740441532124689999964778999
Q ss_pred HCCC
Q ss_conf 0125
Q 005554 194 LQRP 197 (691)
Q Consensus 194 ~~~~ 197 (691)
+|..
T Consensus 156 ~~~~ 159 (200)
T d1dnpa2 156 AWLK 159 (200)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9997
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=5.2e-32 Score=207.16 Aligned_cols=300 Identities=13% Similarity=0.086 Sum_probs=184.6
Q ss_pred CCCCHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEEEEC---CCCCEEEEECCCCCCHHHHHHH
Q ss_conf 87646989999866677-9999998642157899941799998869589999808---9999599985889996779998
Q 005554 371 FGYSAATIAAAADAVCS-MEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQYTVAG---KEGPAILLVHGFGAFLEHYRDN 446 (691)
Q Consensus 371 ~g~s~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~g---~~~p~VIliHG~~~~~~~~~~~ 446 (691)
.|....++...++-+.. .+|....+. -..+....++++|.+|||.... +++++|||+||+++++..|..+
T Consensus 52 ~g~~~~~~~~l~~~w~~~~dw~~~e~~------ln~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~v 125 (394)
T d1qo7a_ 52 FGITSEWLTTMREKWLSEFDWRPFEAR------LNSFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPI 125 (394)
T ss_dssp TSSCHHHHHHHHHHHHHTCCHHHHHHH------HTTSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHH------HHCCCCEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 598899999999986343898999999------87689759998798889999722589987799936654118999998
Q ss_pred HHHHHCCC------CEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCC
Q ss_conf 99985089------799996899976999999--5778999999999999892796789999693699999999958644
Q 005554 447 IYDIADGG------NRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAV 518 (691)
Q Consensus 447 ~~~L~~~G------~~Vi~~D~~G~G~S~~~~--~~~s~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~ 518 (691)
++.|++.| |+||++|+||+|.|+.|. ..++...+++++..+++.++..+.+++|||+||.++..++..+|+.
T Consensus 126 i~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~ 205 (394)
T d1qo7a_ 126 LQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA 205 (394)
T ss_dssp HHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT
T ss_pred HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
T ss_conf 87641135776550444345424347889998777657889999999987640476248998407651789998875125
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH----------------HHHH-------HHHHHHHHHHHHCCC
Q ss_conf 13689953799888841333211342128814566688----------------9999-------996599999864689
Q 005554 519 VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL----------------LLFY-------LRLNISNFVKQCYPT 575 (691)
Q Consensus 519 V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-------~~~~~~~~~~~~~~~ 575 (691)
+.++++++.............................. .... ...........+..
T Consensus 206 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 284 (394)
T d1qo7a_ 206 CKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVD- 284 (394)
T ss_dssp EEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCS-
T ss_pred CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC-
T ss_conf 2101576403432234432100013567788877777775555555430125555432024520046677787642244-
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC------CCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 8740019999999983279316999999850136------7616765148998589997389999992679999998279
Q 005554 576 RRERADDWLISEMLRASYDPGVLVVLESIFSFKL------SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA 649 (691)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~ 649 (691)
.......+......................... .........++++|+++++|.+|...+++. +.+....
T Consensus 285 -~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~---~~~~~~~ 360 (394)
T d1qo7a_ 285 -KPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRS---WIATTGN 360 (394)
T ss_dssp -SCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGGEE
T ss_pred -CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHH---HHHHCCC
T ss_conf -568879999999987500132056799999842235662223212378406875899808885325899---9986468
Q ss_pred CCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8299992-9778988559699999999999830
Q 005554 650 GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 650 ~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
...+.++ +|||++++|+|+++++.|.+|++++
T Consensus 361 ~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 361 LVFFRDHAEGGHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp EEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHH
T ss_conf 469998599478147869999999999999975
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=1.4e-31 Score=204.54 Aligned_cols=273 Identities=13% Similarity=0.025 Sum_probs=169.9
Q ss_pred CCCCCCEEEEEEEE-CCEEEEEEEECCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCC
Q ss_conf 78999417999988-6958999980899-9959998588999677999899985089799996899976999999--577
Q 005554 400 RSNEGVYSTRIWRW-NGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVY 475 (691)
Q Consensus 400 ~~~~~~~~~~~~~~-~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~ 475 (691)
.++..+++.++++. ||.+|+|.++|++ +|+|||+||++++...|..+...|.+ ||+||++|+||+|.|+.+. ..+
T Consensus 5 ~p~~~p~~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~~-~~~vi~~D~rG~G~S~~~~~~~~~ 83 (313)
T d1wm1a_ 5 YPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPE-RYKVLLFDQRGCGRSRPHASLDNN 83 (313)
T ss_dssp CCCCCCSEEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTT-TEEEEEECCTTSTTCBSTTCCTTC
T ss_pred CCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 9999888688799389969999996589998699989999762046888987445-998999847876666533322210
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHH----------H-H
Q ss_conf 8999999999999892796789999693699999999958644136899537998888413332113----------4-2
Q 005554 476 TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSN----------E-R 544 (691)
Q Consensus 476 s~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~----------~-~ 544 (691)
+...+++++..++++++..+++++|||+||.++..+|..+|++|.+++++++............... . .
T Consensus 84 ~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T d1wm1a_ 84 TTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVL 163 (313)
T ss_dssp SHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 02367777776431158775146753047731567888876442044530554455422221112110000002455554
Q ss_pred HCCCHHHHHHHHHHHH-----------HHHHHHHHH--HHHCCCCCCCCC-HHHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf 1288145666889999-----------996599999--864689874001-99999999832793169999998501367
Q 005554 545 QASGPIRLGAQLLLFY-----------LRLNISNFV--KQCYPTRRERAD-DWLISEMLRASYDPGVLVVLESIFSFKLS 610 (691)
Q Consensus 545 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (691)
................ ......... ............ .............................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
T d1wm1a_ 164 SILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDD 243 (313)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 43200011345555431022012345555545555443333212663233333445677665554333444310222100
Q ss_pred CCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHH
Q ss_conf 6167651489985899973899999926799999982798299992-97789885596999999999
Q 005554 611 LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISE 676 (691)
Q Consensus 611 ~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~ 676 (691)
.........+++||++|+|++|.++|++. .+.+.+.+|+++++++ ++||++ ++|+.+.++|..
T Consensus 244 ~~~~~~~~~~~~Pvlii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv~a 307 (313)
T d1wm1a_ 244 QLLRNVPLIRHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLMIA 307 (313)
T ss_dssp HHHHTGGGGTTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCC--CCCHHHHHHHHH
T ss_conf 22333554079998999879998669999-99999878998899989899986--786699999999
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-33 Score=213.04 Aligned_cols=191 Identities=19% Similarity=0.220 Sum_probs=158.9
Q ss_pred EEEEECCEEEEEEEECC----CCCEEEEECCCCCCHHHHHH--HHHHHHCCCCEEEEECCCCCCCCCCCC--CCCCHHHH
Q ss_conf 99988695899998089----99959998588999677999--899985089799996899976999999--57789999
Q 005554 409 RIWRWNGYQIQYTVAGK----EGPAILLVHGFGAFLEHYRD--NIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMW 480 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~----~~p~VIliHG~~~~~~~~~~--~~~~L~~~G~~Vi~~D~~G~G~S~~~~--~~~s~~~~ 480 (691)
.+++++|.+++|+..++ .+++|||+||++++...|.. ++..|+++||+|+++|+||||.|+.+. ..++....
T Consensus 9 ~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~ 88 (208)
T d1imja_ 9 GTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAP 88 (208)
T ss_dssp CCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCC
T ss_pred EEEEECCEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 89998999999999307888999839998999877667765478999997698588741344267778886654312344
Q ss_pred HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99999999892796789999693699999999958644136899537998888413332113421288145666889999
Q 005554 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY 560 (691)
Q Consensus 481 a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (691)
++++.++++.++.++++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 89 ~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~---------------------------- 140 (208)
T d1imja_ 89 GSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------------------- 140 (208)
T ss_dssp THHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------------------
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCC----------------------------
T ss_conf 4432100122122234332467478999999998631111235427611111----------------------------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHH
Q ss_conf 99659999986468987400199999999832793169999998501367616765148998589997389999992679
Q 005554 561 LRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSK 640 (691)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~ 640 (691)
. ....+.++++|+|+|+|++|.++|.+
T Consensus 141 -------------------~--------------------------------~~~~~~~i~~P~Lii~G~~D~~~~~~-- 167 (208)
T d1imja_ 141 -------------------I--------------------------------NAANYASVKTPALIVYGDQDPMGQTS-- 167 (208)
T ss_dssp -------------------S--------------------------------CHHHHHTCCSCEEEEEETTCHHHHHH--
T ss_pred -------------------C--------------------------------CCCCCCCCCCCCCCCCCCCCCCCCHH--
T ss_conf -------------------1--------------------------------22211212322112457758678299--
Q ss_pred HHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999982798299992-9778988559699999999999830
Q 005554 641 VAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 641 ~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+. .+..+++++.++ ++||.+++++|+++.+.+.+||++.
T Consensus 168 ~~~-~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 168 FEH-LKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp HHH-HTTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred HHH-HHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHCC
T ss_conf 999-98689986999798998336649999999999998569
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=5.8e-32 Score=206.88 Aligned_cols=247 Identities=15% Similarity=0.049 Sum_probs=159.2
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCC-CCEEEEEECH
Q ss_conf 99959998588999677999899985089799996899976999999-577899999999999989279-6789999693
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG-EPVHLIGNSI 503 (691)
Q Consensus 426 ~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~di~~ll~~l~~-~~v~lvGhS~ 503 (691)
+|++|||+||+++++..|..+++.|.++||+|+++|+||||.|+.+. ..++..+++.++..+++.... .+++++||||
T Consensus 1 eG~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 1 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf 97838998989998899999999998689989996699999998998777536777887764321022333222112323
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 69999999995864413689953799888841333211342128814566688999999659999986468987400199
Q 005554 504 GGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583 (691)
Q Consensus 504 GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (691)
||.+++.++.++|+++.++|++++............................. ... ................
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~ 152 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQ------FLP--YGSPEEPLTSMFFGPK 152 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCE------EEE--CSCTTSCCEEEECCHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH------HHH--HHHHHHHCCCCCCCHH
T ss_conf 68999987653024431278744657876543678999876531113454433------232--2114442001003678
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCC-------CCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999983279316999999850136-------76167651489985899973899999926799999982798299992
Q 005554 584 LISEMLRASYDPGVLVVLESIFSFKL-------SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL 656 (691)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 656 (691)
.......................... ..........+++|+++|+|++|.+++++. .+.+.+..++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~i 231 (258)
T d1xkla_ 153 FLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEF-QRWQIDNIGVTEAIEI 231 (258)
T ss_dssp HHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHH-HHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEE
T ss_conf 888876420227789886641001455655443322101111344303676405788789999-9999987899889998
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -9778988559699999999999830
Q 005554 657 -DAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 657 -~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
++||++++|+|+++++.|.+|+++.
T Consensus 232 ~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 232 KGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHCHHHHHHHHHHHHHHC
T ss_conf 99997058969999999999999736
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.98 E-value=1e-30 Score=199.34 Aligned_cols=257 Identities=15% Similarity=0.129 Sum_probs=159.9
Q ss_pred ECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHH
Q ss_conf 8695899998089999599985889996779998999850897999968999769999995-778999999999999892
Q 005554 413 WNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFTVEV 491 (691)
Q Consensus 413 ~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s~~~~a~di~~ll~~l 491 (691)
..+.++||...+.++|+|||+||++++...|.++++.|.+.||+|+++|+||||.|..+.. .+.......+........
T Consensus 2 l~~~~lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
T d1r3da_ 2 LLSNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVT 81 (264)
T ss_dssp CCCEEEESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCC
T ss_pred CCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 86786897689999985999699888989999999999868998999746311123434444432045665311000123
Q ss_pred CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79678999969369999999995864413689953799888841333211342128814566688999999659999986
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQ 571 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (691)
..++++++||||||.+++.++.++|+.+.+++++.+............... .......................
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAA------RWQHDQQWAQRFSQQPIEHVLSD 155 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHH------HHHHHHHHHHHHHHSCHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 567603664031699999999968520144422334677866531556555------54212455433223432222565
Q ss_pred HCCCCC-CCCCHHHHHHHHHHCCCCC--HHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 468987-4001999999998327931--6999999850136761676514899858999738999999267999999827
Q 005554 572 CYPTRR-ERADDWLISEMLRASYDPG--VLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC 648 (691)
Q Consensus 572 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~ 648 (691)
...... ................... ....................+..+++|+++|+|++|..+ .. +.+ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~-~~~-~ 228 (264)
T d1r3da_ 156 WYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQ-LAE-S 228 (264)
T ss_dssp HTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HH-HHH-H
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHH-----HH-HHH-C
T ss_conf 5422332024457799999987530014667765410111111114666235761599972776779-----99-985-6
Q ss_pred CCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98299992-97789885596999999999998300
Q 005554 649 AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 649 ~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
++.+++++ ++||++++|+|+++++.|.+||+.+.
T Consensus 229 ~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 229 SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHCC
T ss_conf 89869998999982489799999999999998631
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.98 E-value=8.8e-32 Score=205.80 Aligned_cols=243 Identities=16% Similarity=0.022 Sum_probs=155.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHC-CCCEEEEEECHHHH
Q ss_conf 59998588999677999899985089799996899976999999-57789999999999998927-96789999693699
Q 005554 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVV-GEPVHLIGNSIGGY 506 (691)
Q Consensus 429 ~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~di~~ll~~l~-~~~v~lvGhS~GG~ 506 (691)
-.|||||++++...|..+++.|.++||+|+++|+||||.|+.+. ..++++++++++.+++..+. .++++++||||||.
T Consensus 4 ~~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ 83 (256)
T d3c70a1 4 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGL 83 (256)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHH
T ss_conf 68983999999899999999998589989997699899998998878799999987543544302343312135402889
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHH--HHHCCCHHHHHHHHHHH----HHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999958644136899537998888413332113--42128814566688999----999659999986468987400
Q 005554 507 FVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSN--ERQASGPIRLGAQLLLF----YLRLNISNFVKQCYPTRRERA 580 (691)
Q Consensus 507 ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 580 (691)
+++.++..+|++|+++|++++............... ................. .....................
T Consensus 84 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T d3c70a1 84 NIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPE 163 (256)
T ss_dssp HHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHH
T ss_pred HHHHHHHCCCHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf 99988613831554531002356775323566766543321222346777641011232012200456556665302056
Q ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCC
Q ss_conf 1999999998327931699999985013676167651489985899973899999926799999982798299992-977
Q 005554 581 DDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAG 659 (691)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~ag 659 (691)
.... ... ......... .... ..........+++|+++|+|++|.+++++ ..+.+.+..++.+++++ ++|
T Consensus 164 ~~~~--~~~-~~~~~~~~~---~~~~---~~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~ag 233 (256)
T d3c70a1 164 EYEL--AKM-LTRKGSLFQ---NILA---KRPFFTKEGYGSIKKIYVWTDQDEIFLPE-FQLWQIENYKPDKVYKVEGGD 233 (256)
T ss_dssp HHHH--HHH-HCCCBCCCH---HHHT---TSCCCCTTTGGGSCEEEEECTTCSSSCHH-HHHHHHHHSCCSEEEECCSCC
T ss_pred HHHH--HHH-HHHHHHHHH---HHHH---HCCHHHHHHCCCCCEEEEEECCCCCCCHH-HHHHHHHHCCCCEEEEECCCC
T ss_conf 6777--652-100046777---6654---10012322113330257751378777999-999999878998899989999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8988559699999999999830
Q 005554 660 HCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 660 H~~~~e~pe~v~~~I~~fL~~~ 681 (691)
|++++|+|+++++.|.+|+++.
T Consensus 234 H~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 234 HKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp SCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCHHHHCHHHHHHHHHHHHHHC
T ss_conf 7128869999999999999755
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.97 E-value=7.1e-30 Score=194.33 Aligned_cols=275 Identities=15% Similarity=0.121 Sum_probs=156.6
Q ss_pred CEEEEEEE-ECCEEEEEEEE--C-------CCCCEEEEECCCCCCHHHHH------HHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 41799998-86958999980--8-------99995999858899967799------989998508979999689997699
Q 005554 405 VYSTRIWR-WNGYQIQYTVA--G-------KEGPAILLVHGFGAFLEHYR------DNIYDIADGGNRVWAITLLGFGRS 468 (691)
Q Consensus 405 ~~~~~~~~-~~g~~i~y~~~--g-------~~~p~VIliHG~~~~~~~~~------~~~~~L~~~G~~Vi~~D~~G~G~S 468 (691)
+.+.++++ -||..|..... + .++|+|||+||+++++..|. .++..|+++||+|+++|+||||.|
T Consensus 26 ~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S 105 (377)
T d1k8qa_ 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWA 105 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTS
T ss_pred CCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 85589998179998989984688888766899890899899963146774427520699999987998999808998888
Q ss_pred CCCCC---------CCCH-----HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 99995---------7789-----999999999998927967899996936999999999586441368995379988884
Q 005554 469 EKPNI---------VYTE-----LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPE 534 (691)
Q Consensus 469 ~~~~~---------~~s~-----~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~ 534 (691)
+.+.. .+++ .++.+.+..+++.++.++++++||||||++++.+|..+|+.+++++++.........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~ 185 (377)
T d1k8qa_ 106 RRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATV 185 (377)
T ss_dssp CEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCC
T ss_pred CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCC
T ss_conf 88877787522201377999843417999999999729998799973326999999998632332000467521454444
Q ss_pred ---HHHHHHHHH--------H----HCCCHHHHHHHHHHHH-----HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf ---133321134--------2----1288145666889999-----9965999998646898740019999999983279
Q 005554 535 ---YSFLQFSNE--------R----QASGPIRLGAQLLLFY-----LRLNISNFVKQCYPTRRERADDWLISEMLRASYD 594 (691)
Q Consensus 535 ---~~~~~~~~~--------~----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (691)
......... . ................ ..................................
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (377)
T d1k8qa_ 186 KYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPA 265 (377)
T ss_dssp SSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCC
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 41146789987501366666420001140467777654310220346678776554203777111467776666631555
Q ss_pred CCHHHH---------------------HHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC-E
Q ss_conf 316999---------------------999850136761676514899858999738999999267999999827982-9
Q 005554 595 PGVLVV---------------------LESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGI-V 652 (691)
Q Consensus 595 ~~~~~~---------------------~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~-~ 652 (691)
...... ...........+....++++++|+|+|+|++|.+++++. .+.+.+.+++. +
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~-~~~l~~~lp~~~~ 344 (377)
T d1k8qa_ 266 GTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD-VDLLLSKLPNLIY 344 (377)
T ss_dssp CEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH-HHHHHTTCTTEEE
T ss_pred CCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEE
T ss_conf 335999999999975374122033034555665134575122275489998999958997228999-9999997799759
Q ss_pred EEEE-CCCCCCC---CCCHHHHHHHHHHHHHH
Q ss_conf 9992-9778988---55969999999999983
Q 005554 653 IREL-DAGHCPH---DEKPEEVNSIISEWIVT 680 (691)
Q Consensus 653 ~~~~-~agH~~~---~e~pe~v~~~I~~fL~~ 680 (691)
.+++ ++||+.+ .+.++++...|.+||++
T Consensus 345 ~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 345 HRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred EEEECCCCCCCHHHCCCHHHHHHHHHHHHHHC
T ss_conf 99969998830342445499999999999722
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=4.5e-27 Score=177.48 Aligned_cols=224 Identities=16% Similarity=0.171 Sum_probs=145.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHHCCCCEEEEEEC
Q ss_conf 99959998588999677999899985089799996899976999999577899999999999---989279678999969
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF---TVEVVGEPVHLIGNS 502 (691)
Q Consensus 426 ~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~l---l~~l~~~~v~lvGhS 502 (691)
++++|||+||++++...|..+++.|+++||+|+++|+||||.|..+.......+...++..+ ++..+.++++++|||
T Consensus 10 ~~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 89 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLS 89 (242)
T ss_dssp SSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEET
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99769998899899899999999999789989998589974456654332036788999998752321266765999716
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 36999999999586441368995379988884133321134212881456668899999965999998646898740019
Q 005554 503 IGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADD 582 (691)
Q Consensus 503 ~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (691)
|||.+++.++.++|. ..+++++++........... .. . .......... .. ...
T Consensus 90 ~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------------~~----~-~~~~~~~~~~-~~----~~~ 142 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEETMYE---------------GV----L-EYAREYKKRE-GK----SEE 142 (242)
T ss_dssp HHHHHHHHHHTTSCC--SCEEEESCCSSCCCHHHHHH---------------HH----H-HHHHHHHHHH-TC----CHH
T ss_pred HHHHHHHHHCCCCCC--CCCCCCCCCCCCCCHHHHHH---------------HH----H-HHHHHHHHHC-CC----HHH
T ss_conf 688776542135762--00111246644542157788---------------89----9-9999875401-20----156
Q ss_pred HHHHHHHHH--CCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC-CCCEEEEE-CC
Q ss_conf 999999983--279316999999850136761676514899858999738999999267999999827-98299992-97
Q 005554 583 WLISEMLRA--SYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC-AGIVIREL-DA 658 (691)
Q Consensus 583 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~-~~~~~~~~-~a 658 (691)
......... ............. ......+..+++|+|+++|++|.+++++......+... ++++++++ ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (242)
T d1tqha_ 143 QIEQEMEKFKQTPMKTLKALQELI------ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQS 216 (242)
T ss_dssp HHHHHHHHHTTSCCTTHHHHHHHH------HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTC
T ss_pred HHHHHHHHHHHHCCCHHHCCCCCC------CCCCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 677887642100000000012222------23445332012652025436577569999999999747999589998999
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHHHH
Q ss_conf 78988559-6999999999998300
Q 005554 659 GHCPHDEK-PEEVNSIISEWIVTIE 682 (691)
Q Consensus 659 gH~~~~e~-pe~v~~~I~~fL~~~~ 682 (691)
||+++++. ++++++.|.+||+++.
T Consensus 217 gH~~~~~~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 217 GHVITLDQEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp CSSGGGSTTHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 9847323499999999999997587
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.95 E-value=1.6e-26 Score=174.16 Aligned_cols=238 Identities=11% Similarity=0.038 Sum_probs=151.4
Q ss_pred EEEEEEE-CCEEEEEEEECC------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCCCCCCCCHH
Q ss_conf 7999988-695899998089------9995999858899967799989998508979999689997-6999999577899
Q 005554 407 STRIWRW-NGYQIQYTVAGK------EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPNIVYTEL 478 (691)
Q Consensus 407 ~~~~~~~-~g~~i~y~~~g~------~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~-G~S~~~~~~~s~~ 478 (691)
..+.++. +|.+|+++.+.+ .+++||++||++++...|..+++.|+++||+|+++|+||| |.|++....++..
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~ 84 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT 84 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHH
T ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 01589958999899999647678888889899968984427799999999997899899956789887888865678788
Q ss_pred HHHHHHHHHHHHH---CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 9999999999892---7967899996936999999999586441368995379988884133321134212881456668
Q 005554 479 MWSELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 479 ~~a~di~~ll~~l---~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
++.+|+..+++.+ +.++++++||||||.+++.+|.. ..++++|+.+|....... ..... .......
T Consensus 85 ~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~------~~~~~-~~~~~~~-- 153 (302)
T d1thta_ 85 TGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDT------LEKAL-GFDYLSL-- 153 (302)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHH------HHHHH-SSCGGGS--
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCC--CCCCEEEEECCCCCHHHH------HHHHH-HHCCCHH--
T ss_conf 999899999976303577616899975689999998243--022236763244238899------99998-6604312--
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 89999996599999864689874001999999998327931699999985013676167651489985899973899999
Q 005554 556 LLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPIS 635 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v 635 (691)
....................+......... .........+.++++|+|+++|++|.++
T Consensus 154 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~PvLii~G~~D~~V 211 (302)
T d1thta_ 154 --------PIDELPNDLDFEGHKLGSEVFVRDCFEHHW--------------DTLDSTLDKVANTSVPLIAFTANNDDWV 211 (302)
T ss_dssp --------CGGGCCSEEEETTEEEEHHHHHHHHHHTTC--------------SSHHHHHHHHTTCCSCEEEEEETTCTTS
T ss_pred --------HHHHCCCCCCCCCCCHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf --------455525433445555156777777877677--------------7877798877626899899982899853
Q ss_pred CHHHHHHHHHHHC-CCCEEEEE-CCCCCCCCCCHHH---HHHHHHHHH
Q ss_conf 9267999999827-98299992-9778988559699---999999999
Q 005554 636 DSKSKVAMFKEHC-AGIVIREL-DAGHCPHDEKPEE---VNSIISEWI 678 (691)
Q Consensus 636 p~~~~~~~~~~~~-~~~~~~~~-~agH~~~~e~pe~---v~~~I~~fL 678 (691)
+++...+++.... ++++++++ +++|.+. |+++. +.+.+..++
T Consensus 212 ~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~ 258 (302)
T d1thta_ 212 KQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAA 258 (302)
T ss_dssp CHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCHHHHHHHHHHHHHHH
T ss_conf 999999999857888750798358886666-57489999999998888
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.95 E-value=3.1e-24 Score=160.47 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=153.8
Q ss_pred CCCCEEEEEEEECCEEEEEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-CCC
Q ss_conf 9994179999886958999980899----99599985889996779998999850897999968999769999995-778
Q 005554 402 NEGVYSTRIWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYT 476 (691)
Q Consensus 402 ~~~~~~~~~~~~~g~~i~y~~~g~~----~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~-~~s 476 (691)
...+++.-.+.++|.+|......++ .|+||++||+.++.+.|..+...|.++||.|+++|+||+|.|..... ...
T Consensus 102 ~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~ 181 (360)
T d2jbwa1 102 LSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGD 181 (360)
T ss_dssp SSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSC
T ss_pred CCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 79873996357677666239993699999529999379876477899999999966998999716422235765556566
Q ss_pred HHHHHHHHHHHHHHHC---CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHH
Q ss_conf 9999999999998927---9678999969369999999995864413689953799888841333211342128814566
Q 005554 477 ELMWSELLRDFTVEVV---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLG 553 (691)
Q Consensus 477 ~~~~a~di~~ll~~l~---~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (691)
.+.....+.+++.... .+++.++||||||.+++.+|...| +|+++|.+++......... ..
T Consensus 182 ~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~---------------~~ 245 (360)
T d2jbwa1 182 YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL---------------ET 245 (360)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG---------------SC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHHCCC-CCCEEEEECCCCCHHHHHH---------------HH
T ss_conf 9999999999999660015555342333105099998751598-7554999746555777754---------------33
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCC
Q ss_conf 68899999965999998646898740019999999983279316999999850136761676514899858999738999
Q 005554 554 AQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDP 633 (691)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 633 (691)
.. ....+...... . .. ...... .... .+....+.++++|+|+++|++|.
T Consensus 246 ~~---------~~~~~~~~~~~-~-~~-~~~~~~---------------~~~~----~~~~~~~~~i~~P~Lii~G~~D~ 294 (360)
T d2jbwa1 246 PL---------TKESWKYVSKV-D-TL-EEARLH---------------VHAA----LETRDVLSQIACPTYILHGVHDE 294 (360)
T ss_dssp HH---------HHHHHHHHTTC-S-SH-HHHHHH---------------HHHH----TCCTTTGGGCCSCEEEEEETTSS
T ss_pred HH---------HHHHHHHHCCC-C-CH-HHHHHH---------------HHHH----CCHHHHHHHCCCCEEEEEECCCC
T ss_conf 45---------66777775068-7-35-778898---------------7740----66454675279998999729999
Q ss_pred CCCHHHHHHHHHHHC-CCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 999267999999827-98299992-977898855969999999999983007
Q 005554 634 ISDSKSKVAMFKEHC-AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 634 ~vp~~~~~~~~~~~~-~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
+|++.....++... ++.++++. +++|.. ...+.+....|.+||++...
T Consensus 295 -vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 295 -VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 344 (360)
T ss_dssp -SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHHHC
T ss_conf -289999999996579985999979999677-76757999999999999831
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.2e-28 Score=183.69 Aligned_cols=246 Identities=14% Similarity=0.090 Sum_probs=140.7
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH
Q ss_conf 9995999858899967799989998508--97999968999769999995778999999999999892796789999693
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI 503 (691)
Q Consensus 426 ~~p~VIliHG~~~~~~~~~~~~~~L~~~--G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~lvGhS~ 503 (691)
+++||||+||++++...|..+++.|.+. ||+|+++|+||||.|..+. .++++++++++.++++.++ ++++++||||
T Consensus 1 ~~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~-~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~ 78 (268)
T d1pjaa_ 1 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKAP-QGVHLICYSQ 78 (268)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHCT-TCEEEEEETH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCC-CEEEEECCCC
T ss_conf 9999899899889978999999999851898699985899999999951-0189999999999973158-7579970503
Q ss_pred HHHHHHHHHHHCCC-CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 69999999995864-41368995379988884133321134212881456668899999965999998646898740019
Q 005554 504 GGYFVAIVACLWPA-VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADD 582 (691)
Q Consensus 504 GG~ial~~A~~~p~-~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (691)
||.+++.+|.++|+ +|+++|+++++.......... .............. .........................
T Consensus 79 GG~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (268)
T d1pjaa_ 79 GGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDY--LKWLFPTSMRSNLY---RICYSPWGQEFSICNYWHDPHHDDL 153 (268)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHH--HHHHCTTCCHHHHH---HHHTSTTGGGSTGGGGBCCTTCHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHH--HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 799999999978964334699988887664331023--35667888999999---8755778877656655301255543
Q ss_pred HHHH----HHHHHCCCCCHHHHHHHHHC-CCCC----CCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH--------
Q ss_conf 9999----99983279316999999850-1367----61676514899858999738999999267999999--------
Q 005554 583 WLIS----EMLRASYDPGVLVVLESIFS-FKLS----LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFK-------- 645 (691)
Q Consensus 583 ~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~-------- 645 (691)
.... .................... .... ............+.+.+.|..|.+++.+.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~l 233 (268)
T d1pjaa_ 154 YLNASSFLALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTL 233 (268)
T ss_dssp HHHHCSSHHHHTTSSCCTTHHHHHHHHTTCSEEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHH
T ss_conf 33345578888656766421457888872367169864266501612415777418877153225424555506989998
Q ss_pred HHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 82798299992-9778988559699999999999
Q 005554 646 EHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWI 678 (691)
Q Consensus 646 ~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL 678 (691)
...+..+++++ ++||+++.|+|+.+++.|.+||
T Consensus 234 ~~~~~~~~~~i~g~gH~~~~e~p~~~~~~i~~fL 267 (268)
T d1pjaa_ 234 LARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 267 (268)
T ss_dssp HHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred HHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHC
T ss_conf 7669967999898998326669999999999965
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.92 E-value=4.1e-23 Score=153.67 Aligned_cols=267 Identities=11% Similarity=0.067 Sum_probs=170.4
Q ss_pred ECCEEEEEEEECCC----CCEEEEECCCCCCH---HHHHHHH---HHHHCCCCEEEEECCCCCCCCCCCC----------
Q ss_conf 86958999980899----99599985889996---7799989---9985089799996899976999999----------
Q 005554 413 WNGYQIQYTVAGKE----GPAILLVHGFGAFL---EHYRDNI---YDIADGGNRVWAITLLGFGRSEKPN---------- 472 (691)
Q Consensus 413 ~~g~~i~y~~~g~~----~p~VIliHG~~~~~---~~~~~~~---~~L~~~G~~Vi~~D~~G~G~S~~~~---------- 472 (691)
..+.+|.|..+|.- .++||++|++.+++ ..|..++ ..|-...|.||++|..|.|.++.++
T Consensus 26 l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~ 105 (376)
T d2vata1 26 LRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQ 105 (376)
T ss_dssp EEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--
T ss_pred CCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 58956999962564888998899848876770212348870779986374633899834678876788887789621237
Q ss_pred -------CCCCHHHHHHHHHHHHHHHCCCCEE-EEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHH-HHH-
Q ss_conf -------5778999999999999892796789-999693699999999958644136899537998888413332-113-
Q 005554 473 -------IVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQ-FSN- 542 (691)
Q Consensus 473 -------~~~s~~~~a~di~~ll~~l~~~~v~-lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~-~~~- 542 (691)
..+++.|+++....++++++++++. +||.||||+.|+++|..||++|+++|.+++.....+...... ...
T Consensus 106 ~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ 185 (376)
T d2vata1 106 RPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQ 185 (376)
T ss_dssp CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 75455688520578899999999873866178861342788999999983617775231235652345577888899998
Q ss_pred --HHHCCC-----------HHHHHHHHHHHHHHHHHHHHHHHHCCCCC--------------------------------
Q ss_conf --421288-----------14566688999999659999986468987--------------------------------
Q 005554 543 --ERQASG-----------PIRLGAQLLLFYLRLNISNFVKQCYPTRR-------------------------------- 577 (691)
Q Consensus 543 --~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 577 (691)
.....| ...+................+...+....
T Consensus 186 ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
T d2vata1 186 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 265 (376)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCH
T ss_conf 74222124577754331167899999999999845999999997232244222000100011101344433222234315
Q ss_pred CCCCHHH---HHHHHHHCCCCCHHHHHHHHHCCCCC----CCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 4001999---99999832793169999998501367----6167651489985899973899999926799999982798
Q 005554 578 ERADDWL---ISEMLRASYDPGVLVVLESIFSFKLS----LPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650 (691)
Q Consensus 578 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~ 650 (691)
.....++ .+.+...............+..++.. .++...+..|++|+|+|.++.|.++|++. .+.+.+.+++
T Consensus 266 ~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~-~~e~a~~l~~ 344 (376)
T d2vata1 266 EAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE-HVEMGRSIPN 344 (376)
T ss_dssp GGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH-HHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHH-HHHHHHHCCC
T ss_conf 679999998776553055501289999999850333333889999985089998999868420849999-9999986278
Q ss_pred CEEEEE--CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 299992--977898855969999999999983
Q 005554 651 IVIREL--DAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 651 ~~~~~~--~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
+++.++ ..||..++.+++.+.+.|.+||++
T Consensus 345 a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 345 SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 74999899988652266999999999999748
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.91 E-value=6.2e-22 Score=146.61 Aligned_cols=269 Identities=12% Similarity=0.095 Sum_probs=168.5
Q ss_pred EECCEEEEEEEECCC----CCEEEEECCCCCCHHH---------HHHHH---HHHHCCCCEEEEECCCCCCCCCCCC---
Q ss_conf 886958999980899----9959998588999677---------99989---9985089799996899976999999---
Q 005554 412 RWNGYQIQYTVAGKE----GPAILLVHGFGAFLEH---------YRDNI---YDIADGGNRVWAITLLGFGRSEKPN--- 472 (691)
Q Consensus 412 ~~~g~~i~y~~~g~~----~p~VIliHG~~~~~~~---------~~~~~---~~L~~~G~~Vi~~D~~G~G~S~~~~--- 472 (691)
...+.+|.|..+|.- .++||++|++.+++.. |..++ ..|-...|.||++|..|.|.++.++
T Consensus 20 ~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~ 99 (357)
T d2b61a1 20 KLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSI 99 (357)
T ss_dssp EECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSB
T ss_pred CCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 65895699996233378899889984887766533356788875887127997667775189985566776666776788
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHCCCCE-EEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHH-
Q ss_conf ------------577899999999999989279678-999969369999999995864413689953799888841333-
Q 005554 473 ------------IVYTELMWSELLRDFTVEVVGEPV-HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFL- 538 (691)
Q Consensus 473 ------------~~~s~~~~a~di~~ll~~l~~~~v-~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~- 538 (691)
..+++.++++....++++++++++ .++|.||||+.|+.+|..||+.|+++|.+++.....+.....
T Consensus 100 ~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~ 179 (357)
T d2b61a1 100 NPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN 179 (357)
T ss_dssp CTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 98889977764221106899999999998718664888840407888999998742677743324445643323578887
Q ss_pred HHHH---HHHCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHCCCCC----------CCCCHHHH---HHHHHH
Q ss_conf 2113---4212881-----------4566688999999659999986468987----------40019999---999983
Q 005554 539 QFSN---ERQASGP-----------IRLGAQLLLFYLRLNISNFVKQCYPTRR----------ERADDWLI---SEMLRA 591 (691)
Q Consensus 539 ~~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~---~~~~~~ 591 (691)
.... .....+. ..+................+...+.... .....++. +.+...
T Consensus 180 ~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~r 259 (357)
T d2b61a1 180 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLER 259 (357)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 88999998287777887556888306899999998864047899998745222344332365356999999988988760
Q ss_pred CCCCCHHHHHHHHHCCCC---CCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHH---HCCCCEEEEE--CCCCCCC
Q ss_conf 279316999999850136---7616765148998589997389999992679999998---2798299992--9778988
Q 005554 592 SYDPGVLVVLESIFSFKL---SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE---HCAGIVIREL--DAGHCPH 663 (691)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~---~~~~~~~~~~--~agH~~~ 663 (691)
............+..++. ..+....+++|++|+|+|..+.|.+.|++...+..+. ...+++++++ ..||..+
T Consensus 260 fDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdaf 339 (357)
T d2b61a1 260 FDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF 339 (357)
T ss_dssp CCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 79999999999866326543333389998626998899984775065989999999999866998699997999875554
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 55969999999999983
Q 005554 664 DEKPEEVNSIISEWIVT 680 (691)
Q Consensus 664 ~e~pe~v~~~I~~fL~~ 680 (691)
+-+.+++.+.|.+||+.
T Consensus 340 L~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 340 LVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHCC
T ss_conf 76989999999999735
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.91 E-value=1.9e-23 Score=155.66 Aligned_cols=213 Identities=13% Similarity=0.077 Sum_probs=142.6
Q ss_pred CCCEEEEECCC--CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC---CCCHHHHHHHHHH-HHHHHCCCCEEEE
Q ss_conf 99959998588--9996779998999850897999968999769999995---7789999999999-9989279678999
Q 005554 426 EGPAILLVHGF--GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSELLRD-FTVEVVGEPVHLI 499 (691)
Q Consensus 426 ~~p~VIliHG~--~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~---~~s~~~~a~di~~-ll~~l~~~~v~lv 499 (691)
..|+++|+||+ +++...|.+++..|... ++|+++|+||+|.|+.+.. ..+++++++.+.+ +.+..+..+++|+
T Consensus 59 ~~~~l~c~~~~~~~g~~~~y~~la~~L~~~-~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~vL~ 137 (283)
T d2h7xa1 59 GRAVLVGCTGTAANGGPHEFLRLSTSFQEE-RDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLL 137 (283)
T ss_dssp CCCEEEEECCCCTTCSTTTTHHHHHTTTTT-CCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 985699967888888789999999963888-5189986888777878764555489999999999999985589865999
Q ss_pred EECHHHHHHHHHHHHCC----CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96936999999999586----44136899537998888413332113421288145666889999996599999864689
Q 005554 500 GNSIGGYFVAIVACLWP----AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPT 575 (691)
Q Consensus 500 GhS~GG~ial~~A~~~p----~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (691)
||||||.+|+.+|.+.+ ..|.++|++++.......... ..............
T Consensus 138 GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~---------------------~~~~~~~~~~~~~~--- 193 (283)
T d2h7xa1 138 GHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIE---------------------VWSRQLGEGLFAGE--- 193 (283)
T ss_dssp EETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHH---------------------HTHHHHHHHHHHTC---
T ss_pred EECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH---------------------HHHHHHHHHHHCCC---
T ss_conf 965435999999986298739974178886687555656215---------------------56665688863535---
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC-CCEEE
Q ss_conf 87400199999999832793169999998501367616765148998589997389999992679999998279-82999
Q 005554 576 RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCA-GIVIR 654 (691)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~-~~~~~ 654 (691)
............. ........ .....+++|+++|+|++|..++.+.... +....+ ..+++
T Consensus 194 -~~~~~~~~l~a~~---------~~~~~~~~--------~~~~~~~~Pvl~i~g~~d~~~~~~~~~~-w~~~~~~~~~~~ 254 (283)
T d2h7xa1 194 -LEPMSDARLLAMG---------RYARFLAG--------PRPGRSSAPVLLVRASEPLGDWQEERGD-WRAHWDLPHTVA 254 (283)
T ss_dssp -SSCCCHHHHHHHH---------HHHHHHHS--------CCCCCCCSCEEEEEESSCSSCCCGGGCC-CSCCCSSCSEEE
T ss_pred -CCCCCCHHHHHHH---------HHHHHHHH--------CCCCCCCCCEEEEEECCCCCCCHHHHHH-HHHHCCCCCEEE
T ss_conf -4345628888778---------89998752--------2334567886999848998889789999-998589981899
Q ss_pred EECCCCCCCC-CCHHHHHHHHHHHHHHHH
Q ss_conf 9297789885-596999999999998300
Q 005554 655 ELDAGHCPHD-EKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 655 ~~~agH~~~~-e~pe~v~~~I~~fL~~~~ 682 (691)
.++++|+.++ ++++.+++.|.+||+.+.
T Consensus 255 ~v~G~H~~ml~e~~~~vA~~i~~~L~~ld 283 (283)
T d2h7xa1 255 DVPGDHFTMMRDHAPAVAEAVLSWLDAIE 283 (283)
T ss_dssp EESSCTTHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 97589855033889999999999998549
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.6e-21 Score=144.05 Aligned_cols=230 Identities=16% Similarity=0.084 Sum_probs=139.5
Q ss_pred EEEEEECCEEEEEEEECC----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC--------
Q ss_conf 999988695899998089----99959998588999677999899985089799996899976999999577--------
Q 005554 408 TRIWRWNGYQIQYTVAGK----EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY-------- 475 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~----~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~-------- 475 (691)
+.+-..+|.+|+.....+ +.|+||++||++++...|...+..|+++||.|+++|+||+|.|..+....
T Consensus 59 v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~ 138 (318)
T d1l7aa_ 59 LTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWM 138 (318)
T ss_dssp EEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSST
T ss_pred EEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHCCH
T ss_conf 99987999399999996489997129999168777752028999999978998999840788887887432102331100
Q ss_pred ----------CHHHHHHHHHHH---HHHHCC---CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf ----------899999999999---989279---6789999693699999999958644136899537998888413332
Q 005554 476 ----------TELMWSELLRDF---TVEVVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQ 539 (691)
Q Consensus 476 ----------s~~~~a~di~~l---l~~l~~---~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~ 539 (691)
.......+.... +..... ..+.++|+|+||..++..+...+. +.+++...+.......
T Consensus 139 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 212 (318)
T d1l7aa_ 139 TKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFER----- 212 (318)
T ss_dssp TTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHH-----
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCC-CCEEEEECCCCCCHHH-----
T ss_conf 1010103433357889999999999986655567616998614664888887660864-2259994165322888-----
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCC
Q ss_conf 11342128814566688999999659999986468987400199999999832793169999998501367616765148
Q 005554 540 FSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEG 619 (691)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 619 (691)
....... ..... ............... ..............+++
T Consensus 213 ----------------------------~~~~~~~-~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 256 (318)
T d1l7aa_ 213 ----------------------------AIDVALE-QPYLE----INSFFRRNGSPETEV---QAMKTLSYFDIMNLADR 256 (318)
T ss_dssp ----------------------------HHHHCCS-TTTTH----HHHHHHHSCCHHHHH---HHHHHHHTTCHHHHGGG
T ss_pred ----------------------------HHHCCCC-CCCCH----HHHHHHCCCCCCCCC---CCCCCCCCCCCCCCCCC
T ss_conf ----------------------------8630344-55200----101221156533233---11122100000011236
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9985899973899999926799999982798299992-977898855969999999999983007
Q 005554 620 FKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 620 i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
+++|+|+++|++|.++|++...+.++....+.+++++ ++||... +++.+.+.+||+++..
T Consensus 257 i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~----~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 257 VKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYI----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCC----HHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCC----HHHHHHHHHHHHHHCC
T ss_conf 788889998789998099999999997599938999799999984----8999999999998679
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.90 E-value=3e-21 Score=142.48 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=132.3
Q ss_pred EEECCEEEEEEEECC--C---C-CEEEEECCC---CCC--HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHH
Q ss_conf 988695899998089--9---9-959998588---999--6779998999850897999968999769999995778999
Q 005554 411 WRWNGYQIQYTVAGK--E---G-PAILLVHGF---GAF--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELM 479 (691)
Q Consensus 411 ~~~~g~~i~y~~~g~--~---~-p~VIliHG~---~~~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~ 479 (691)
+.....++......+ . . +.+|++|+. |++ ...+..+++.|++.||.|+++|+||+|.|....... ..
T Consensus 13 i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~--~~ 90 (218)
T d2fuka1 13 LDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHG--DG 90 (218)
T ss_dssp EEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTT--TH
T ss_pred EECCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC--CC
T ss_conf 9689846899997578878899868999799988786789869999999999759859996467876677766767--54
Q ss_pred HHHHHHHHH----HHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 999999999----8927967899996936999999999586441368995379988884133321134212881456668
Q 005554 480 WSELLRDFT----VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQ 555 (691)
Q Consensus 480 ~a~di~~ll----~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (691)
..+|+..++ +.....+++++||||||.+++.+|... .++++|+++++...
T Consensus 91 ~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~------------------------ 144 (218)
T d2fuka1 91 EQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR------------------------ 144 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT------------------------
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCC--CCCEEEEECCCCCC------------------------
T ss_conf 3999999998876415675289999725536665442033--11629995872001------------------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 89999996599999864689874001999999998327931699999985013676167651489985899973899999
Q 005554 556 LLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPIS 635 (691)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v 635 (691)
+. + ....+.+|+|+|+|++|.++
T Consensus 145 -----------------~~--------------------------------~--------~~~~~~~P~Lvi~G~~D~~v 167 (218)
T d2fuka1 145 -----------------WD--------------------------------F--------SDVQPPAQWLVIQGDADEIV 167 (218)
T ss_dssp -----------------BC--------------------------------C--------TTCCCCSSEEEEEETTCSSS
T ss_pred -----------------HH--------------------------------H--------HCCCCCCCEEEEECCCCCCC
T ss_conf -----------------11--------------------------------3--------20143210356744778586
Q ss_pred CHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 926799999982798299992-97789885596999999999998300789
Q 005554 636 DSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESKV 685 (691)
Q Consensus 636 p~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~~~ 685 (691)
|++...++++......+++++ +++|+.. .+.+++.+.+.+|+++.....
T Consensus 168 p~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~~l~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 168 DPQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGALQHGVRRWLPAT 217 (218)
T ss_dssp CHHHHHHHHTTCSSCCEEEEETTCCTTCT-TCHHHHHHHHHHHHGGGCSSC
T ss_pred CHHHHHHHHHHCCCCCEEEEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999987468955999689998877-788999999999999866899
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.7e-23 Score=155.98 Aligned_cols=219 Identities=9% Similarity=0.027 Sum_probs=132.0
Q ss_pred CEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-CC
Q ss_conf 95899998089999599985889996779998999850897999968999769999995778999999999999892-79
Q 005554 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV-VG 493 (691)
Q Consensus 415 g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l-~~ 493 (691)
|.+..+...+..+++|+|+||++++...|..+++.|. +|.|+++|++|+|. .++++.+.+.++ ..
T Consensus 5 g~~~~~~~~~~~~~~l~~lhg~~g~~~~~~~la~~L~--~~~v~~~~~~g~~~------------~a~~~~~~i~~~~~~ 70 (230)
T d1jmkc_ 5 GLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEED------------RLDRYADLIQKLQPE 70 (230)
T ss_dssp SSTTEEEESTTCSEEEEEECCTTCCGGGGHHHHHHCT--TEEEEEECCCCSTT------------HHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCC--CCEEECCCCCCHHH------------HHHHHHHHHHHHCCC
T ss_conf 7716775569999869998199778999999998789--88876367688787------------999999999986788
Q ss_pred CCEEEEEECHHHHHHHHHHHHCCCCCCEE---EEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67899996936999999999586441368---995379988884133321134212881456668899999965999998
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSV---VLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK 570 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~p~~V~~l---Ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (691)
++++|+||||||.+|+.+|.++|+++..+ +.+++........ ... . ....... .+.
T Consensus 71 ~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~----~~~----~------------~~~~~~~-~~~ 129 (230)
T d1jmkc_ 71 GPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSD----LDG----R------------TVESDVE-ALM 129 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC----------------------------CCHH-HHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH----HHH----H------------HHHHHHH-HHH
T ss_conf 748999526672999999986366186302431023567632123----323----3------------4455666-643
Q ss_pred HHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 64689874001999999998327931699999985013676167651489985899973899999926799999982798
Q 005554 571 QCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG 650 (691)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~ 650 (691)
..................... .......... ......+++|+++|+|++|..++.. ...+......+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~~~~ 196 (230)
T d1jmkc_ 130 NVNRDNEALNSEAVKHGLKQK-----THAFYSYYVN-------LISTGQVKADIDLLTSGADFDIPEW-LASWEEATTGA 196 (230)
T ss_dssp HHTTTCSGGGSHHHHHHHHHH-----HHHHHHHHHH-------CCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGBSSC
T ss_pred HCCCCCCCCCCHHHHHHHHHH-----HHHHHHHHHC-------CCCCCCCCCCCEEEEECCCCCCCHH-HHHHHHHCCCC
T ss_conf 102222123427788999999-----9999985321-------0101345676025651578666466-89999855698
Q ss_pred CEEEEECCCCCCCCCCH--HHHHHHHHHHHHHH
Q ss_conf 29999297789885596--99999999999830
Q 005554 651 IVIRELDAGHCPHDEKP--EEVNSIISEWIVTI 681 (691)
Q Consensus 651 ~~~~~~~agH~~~~e~p--e~v~~~I~~fL~~~ 681 (691)
.+++++++||+.+++.| +++++.|.+||++.
T Consensus 197 ~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 197 YRMKRGFGTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp EEEEECSSCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred CEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 389997577844348752999999999998333
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=5.9e-23 Score=152.77 Aligned_cols=255 Identities=11% Similarity=0.075 Sum_probs=135.3
Q ss_pred CCEEEEEEEECC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHH
Q ss_conf 695899998089-9995999858899967799989998508979999689997699999957789999999999-99892
Q 005554 414 NGYQIQYTVAGK-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRD-FTVEV 491 (691)
Q Consensus 414 ~g~~i~y~~~g~-~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~-ll~~l 491 (691)
+|.+|.+...+. ++++|+|+||++++...|..+++.| +++|+++|+||+|.|+ +++++++++.. +.+..
T Consensus 11 ~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L---~~~v~~~d~~g~~~~~------~~~~~a~~~~~~~~~~~ 81 (286)
T d1xkta_ 11 EGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPLD------SIHSLAAYYIDCIRQVQ 81 (286)
T ss_dssp TSCSEEECCCCCCCSCCEEEECCTTCCCGGGHHHHHTC---SSCEEEECCCTTSCCS------CHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHC---CCEEEEEECCCCCCCC------CHHHHHHHHHHHHHHHC
T ss_conf 99879980579999983999899986699999999976---9939997489999989------99999999988889856
Q ss_pred CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHH----HHHHHHHHCCCH-HHHHHHHHHHHH----H
Q ss_conf 7967899996936999999999586441368995379988884133----321134212881-456668899999----9
Q 005554 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSF----LQFSNERQASGP-IRLGAQLLLFYL----R 562 (691)
Q Consensus 492 ~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~----~ 562 (691)
+.++++++||||||.+|+.+|.++|+++.++++++......+.... ............ ............ .
T Consensus 82 ~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (286)
T d1xkta_ 82 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTD 161 (286)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHC------CCEEEEESCCSCC-------------CCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 88716885237865889999999897178752688861166663100001123444300022224678999988765215
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC---CCHHHHH-HHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCC--
Q ss_conf 65999998646898740019999999983279---3169999-99850136761676514899858999738999999--
Q 005554 563 LNISNFVKQCYPTRRERADDWLISEMLRASYD---PGVLVVL-ESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISD-- 636 (691)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp-- 636 (691)
................................ ....... ..+.................+|+.++.+..|....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T d1xkta_ 162 MEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYGNVMLLRAKTGGAYGED 241 (286)
T ss_dssp CCHHHHHHHHTTSSSHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHTTCCCSSCBCSCEEEEEESCC------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
T ss_conf 55778899987640046889999997531013467778888999999986776530002466763369995267655568
Q ss_pred HHHHHHHHHHHC-CCCEEEEECCCCCCCCCCH--HHHHHHHHHHH
Q ss_conf 267999999827-9829999297789885596--99999999999
Q 005554 637 SKSKVAMFKEHC-AGIVIRELDAGHCPHDEKP--EEVNSIISEWI 678 (691)
Q Consensus 637 ~~~~~~~~~~~~-~~~~~~~~~agH~~~~e~p--e~v~~~I~~fL 678 (691)
... ...+.+.. ++.+++.+++||+.++++| ++++++|.+||
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~i~g~H~~~le~p~~~~va~~i~~~L 285 (286)
T d1xkta_ 242 LGA-DYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESIISIIHSSL 285 (286)
T ss_dssp CCS-STTGGGTBCSCEEEEEESSCTTTTTC-CHHHHHHHHHHHHC
T ss_pred HHH-HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 367-88899737899789998478730217851999999999964
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.89 E-value=1e-21 Score=145.25 Aligned_cols=269 Identities=13% Similarity=0.133 Sum_probs=163.5
Q ss_pred EECCEEEEEEEECCC----CCEEEEECCCCCCH-------------HHHHHHHH---HHHCCCCEEEEECCCCCCCCCCC
Q ss_conf 886958999980899----99599985889996-------------77999899---98508979999689997699999
Q 005554 412 RWNGYQIQYTVAGKE----GPAILLVHGFGAFL-------------EHYRDNIY---DIADGGNRVWAITLLGFGRSEKP 471 (691)
Q Consensus 412 ~~~g~~i~y~~~g~~----~p~VIliHG~~~~~-------------~~~~~~~~---~L~~~G~~Vi~~D~~G~G~S~~~ 471 (691)
...+.+|.|..+|.- .++||++|++.+++ ..|..++- .|....|.||++|..|.|.|+.+
T Consensus 23 ~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~ 102 (362)
T d2pl5a1 23 VLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 102 (362)
T ss_dssp EESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred CCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 76895699996303388899889987887763211556776678833588845999764755357996233567666667
Q ss_pred C---------------CCCCHHHHHHHHHHHHHHHCCCCEE-EEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCH
Q ss_conf 9---------------5778999999999999892796789-99969369999999995864413689953799888841
Q 005554 472 N---------------IVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY 535 (691)
Q Consensus 472 ~---------------~~~s~~~~a~di~~ll~~l~~~~v~-lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~ 535 (691)
+ ...++.+++.....++++++++++. ++|.||||+.|+.+|..||+.|+++|.+++.....+..
T Consensus 103 ~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 103 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHH
T ss_conf 54200123455576775201688999999999971867267774035778899999984836766400134653367779
Q ss_pred HHHH-HHHH---HHCCC----------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCHHHHHHHHHH------
Q ss_conf 3332-1134---21288----------1456668899999965999998646898740----019999999983------
Q 005554 536 SFLQ-FSNE---RQASG----------PIRLGAQLLLFYLRLNISNFVKQCYPTRRER----ADDWLISEMLRA------ 591 (691)
Q Consensus 536 ~~~~-~~~~---~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------ 591 (691)
.... .... ....| ...+................+...+...... ......+.++..
T Consensus 183 ~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~ 262 (362)
T d2pl5a1 183 IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 262 (362)
T ss_dssp HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999998449742368756678367999999999998709266665633334445544206779999999898887
Q ss_pred -CCC-CCHHHHHHHHHCCCC--CCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC---CCCEEEEE--CCCCCC
Q ss_conf -279-316999999850136--761676514899858999738999999267999999827---98299992--977898
Q 005554 592 -SYD-PGVLVVLESIFSFKL--SLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC---AGIVIREL--DAGHCP 662 (691)
Q Consensus 592 -~~~-~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~---~~~~~~~~--~agH~~ 662 (691)
..+ .........+..++. ..+....+++|++|+|+|..+.|.++|++...+..+.+. .++.++++ ..||..
T Consensus 263 ~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHda 342 (362)
T d2pl5a1 263 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDS 342 (362)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGG
T ss_pred HCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
T ss_conf 40787789999863111463332259999961899889998575527599999999999975799769999489997421
Q ss_pred CCCCHHHHHHHHHHHHHH
Q ss_conf 855969999999999983
Q 005554 663 HDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 663 ~~e~pe~v~~~I~~fL~~ 680 (691)
++.+.+++.+.|.+||+.
T Consensus 343 FL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 343 FLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GGSCCHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHCC
T ss_conf 054889999999999739
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=1.1e-20 Score=139.01 Aligned_cols=214 Identities=15% Similarity=0.130 Sum_probs=135.8
Q ss_pred EEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC----CHHHH-
Q ss_conf 1799998869589999808999959998588999677999899985089799996899976999999577----89999-
Q 005554 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY----TELMW- 480 (691)
Q Consensus 406 ~~~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~----s~~~~- 480 (691)
+.++.+++.|..+.+...++++|+||++||++++...|..+++.|++.||.|+++|++|||.|..+.... .....
T Consensus 3 ~~~~~~~l~g~~~~~~~p~~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~ 82 (238)
T d1ufoa_ 3 VRTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEETTEEEEEEEESSCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHH
T ss_pred EEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99987898879998517999976999968999898899999999997898899845789988764222344201232113
Q ss_pred ------HHHHHHHH---HHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHH
Q ss_conf ------99999999---892796789999693699999999958644136899537998888413332113421288145
Q 005554 481 ------SELLRDFT---VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIR 551 (691)
Q Consensus 481 ------a~di~~ll---~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (691)
.+.+..++ ......++.++|+|+||.+++.++..+|+ +.+++.+.+......... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~-------~------- 147 (238)
T d1ufoa_ 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQ-------G------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCT-------T-------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCC-HHHEEEEEEECCCCCCCC-------C-------
T ss_conf 5677679999987653213577549999756528999999861862-220001221012334320-------0-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECC
Q ss_conf 66688999999659999986468987400199999999832793169999998501367616765148998589997389
Q 005554 552 LGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIK 631 (691)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~ 631 (691)
......... .. .. ...........++|+|+++|++
T Consensus 148 -------------------------~~~~~~~~~-~~----------------~~---~~~~~~~~~~~~~P~li~~G~~ 182 (238)
T d1ufoa_ 148 -------------------------QVVEDPGVL-AL----------------YQ---APPATRGEAYGGVPLLHLHGSR 182 (238)
T ss_dssp -------------------------CCCCCHHHH-HH----------------HH---SCGGGCGGGGTTCCEEEEEETT
T ss_pred -------------------------CCCCCCCCC-CH----------------HH---HHHHHHHHHHCCCCEEEEECCC
T ss_conf -------------------------222222222-00----------------22---2101245551478738998178
Q ss_pred CCCCCHHHHHHHHHHHC-----CCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999267999999827-----98299992-97789885596999999999998
Q 005554 632 DPISDSKSKVAMFKEHC-----AGIVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 632 D~~vp~~~~~~~~~~~~-----~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~ 679 (691)
|.+++.+...+..+.+. .+.++... ++||...-+.-+...+.+.+||+
T Consensus 183 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 183 DHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp CTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 874599999999999996699943999997978985699999999999999866
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2e-20 Score=137.56 Aligned_cols=177 Identities=12% Similarity=0.142 Sum_probs=121.5
Q ss_pred CEEEEECCCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHH
Q ss_conf 959998588999677--999899985089799996899976999999577899999999999989279678999969369
Q 005554 428 PAILLVHGFGAFLEH--YRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (691)
Q Consensus 428 p~VIliHG~~~~~~~--~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~lvGhS~GG 505 (691)
..||++||++++... +..+++.|.+.||.|+++|+||+|.+ ..+++.+.+...++.. ..+++++||||||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~-------~~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg 73 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP-------RLEDWLDTLSLYQHTL-HENTYLVAHSLGC 73 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC-------CHHHHHHHHHTTGGGC-CTTEEEEEETTHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC-------HHHHHHHHHHHHHHCC-CCCCEEEEECHHH
T ss_conf 8899979989896320799999999958998999514799961-------1999999999997421-7881899712145
Q ss_pred HHHHHHHHHCCCCC--CEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 99999999586441--3689953799888841333211342128814566688999999659999986468987400199
Q 005554 506 YFVAIVACLWPAVV--KSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDW 583 (691)
Q Consensus 506 ~ial~~A~~~p~~V--~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (691)
.+++.++.+++... .+++..++.....+.... ...... ...
T Consensus 74 ~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------------------~~~~~~-~~~----- 116 (186)
T d1uxoa_ 74 PAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM-------------------------------LDEFTQ-GSF----- 116 (186)
T ss_dssp HHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG-------------------------------GGGGTC-SCC-----
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH-------------------------------HHHHHC-CCC-----
T ss_conf 8999999858765426677402565541012322-------------------------------100000-232-----
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCC
Q ss_conf 9999998327931699999985013676167651489985899973899999926799999982798299992-977898
Q 005554 584 LISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCP 662 (691)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~ 662 (691)
......++..|+++|+|++|.++|++...+ +.+.. +++++++ ++||+.
T Consensus 117 -----------------------------~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~-l~~~~-~~~~~~~~~~gH~~ 165 (186)
T d1uxoa_ 117 -----------------------------DHQKIIESAKHRAVIASKDDQIVPFSFSKD-LAQQI-DAALYEVQHGGHFL 165 (186)
T ss_dssp -----------------------------CHHHHHHHEEEEEEEEETTCSSSCHHHHHH-HHHHT-TCEEEEETTCTTSC
T ss_pred -----------------------------CCCCCCCCCCCEEEEECCCCCCCCHHHHHH-HHHHC-CCEEEEECCCCCCC
T ss_conf -----------------------------223234679988999647888789999999-99986-99899968989867
Q ss_pred CCCC---HHHHHHHHHHHHHH
Q ss_conf 8559---69999999999983
Q 005554 663 HDEK---PEEVNSIISEWIVT 680 (691)
Q Consensus 663 ~~e~---pe~v~~~I~~fL~~ 680 (691)
..+. -.++.+.|.+||.+
T Consensus 166 ~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 166 EDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp GGGTCSCCHHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHCC
T ss_conf 545676129999999999757
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2.6e-21 Score=142.88 Aligned_cols=172 Identities=17% Similarity=0.108 Sum_probs=137.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
Q ss_conf 99599985889996779998999850897999968999769999995778999999999999892796789999693699
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (691)
Q Consensus 427 ~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ 506 (691)
++||||+||++++...|..+++.|.++||.++.+|.+|++.+.... ..+.+.+++++.+++++.+.++++++||||||.
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~ 80 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN-YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGA 80 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH-HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
T ss_conf 8999998999999889999999999769969998447762123322-001345777899999862996599985167688
Q ss_pred HHHHHHHHC--CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 999999958--644136899537998888413332113421288145666889999996599999864689874001999
Q 005554 507 FVAIVACLW--PAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWL 584 (691)
Q Consensus 507 ial~~A~~~--p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (691)
++..++..+ |++|+++|+++++....... ..+
T Consensus 81 va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~------------------------------------~l~---------- 114 (179)
T d1ispa_ 81 NTLYYIKNLDGGNKVANVVTLGGANRLTTGK------------------------------------ALP---------- 114 (179)
T ss_dssp HHHHHHHHSSGGGTEEEEEEESCCGGGTCSB------------------------------------CCC----------
T ss_pred HHHHHHHHCCCCHHHCEEEEECCCCCCCHHH------------------------------------HCC----------
T ss_conf 9999999749932448899989998881066------------------------------------557----------
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCC
Q ss_conf 999998327931699999985013676167651489985899973899999926799999982798299992-9778988
Q 005554 585 ISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPH 663 (691)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~ 663 (691)
.......+|++.|+|..|.++++.. ...++.+.+.+ +.+|..+
T Consensus 115 ------------------------------~~~~~~~~~~~~i~~~~D~~v~~~~------~~l~~~~~~~~~~~~H~~l 158 (179)
T d1ispa_ 115 ------------------------------GTDPNQKILYTSIYSSADMIVMNYL------SRLDGARNVQIHGVGHIGL 158 (179)
T ss_dssp ------------------------------CSCTTCCCEEEEEEETTCSSSCHHH------HCCBTSEEEEESSCCTGGG
T ss_pred ------------------------------CCCCCCCCEEEEEEECCCCCCCCHH------HCCCCCEEEEECCCCCHHH
T ss_conf ------------------------------7665569508999766776258113------1179824789779994302
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 5596999999999998300
Q 005554 664 DEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 664 ~e~pe~v~~~I~~fL~~~~ 682 (691)
..+| ++.+.|.+||+.-.
T Consensus 159 ~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 159 LYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp GGCH-HHHHHHHHHHTTTC
T ss_pred CCCH-HHHHHHHHHHHCCC
T ss_conf 3399-99999999985008
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.85 E-value=1.4e-23 Score=156.46 Aligned_cols=251 Identities=12% Similarity=0.040 Sum_probs=144.5
Q ss_pred EEEEECCEEEEEEEECCC-CCEEEEECCCCCCHHHHHH-------HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 999886958999980899-9959998588999677999-------89998508979999689997699999957789999
Q 005554 409 RIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRD-------NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMW 480 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~~-~p~VIliHG~~~~~~~~~~-------~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~ 480 (691)
.++..+...+.|....++ +++|||+||++.+...|.. ++..+.++||+|+++|+||||.|..+...++...+
T Consensus 39 ~~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~ 118 (318)
T d1qlwa_ 39 GTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 118 (318)
T ss_dssp EEEEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred CCEEECEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHH
T ss_conf 73660417999978888898748998799877680014765430677999968987998268998999986222788889
Q ss_pred HHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCCC-CCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 9999999989279--6789999693699999999958644-136899537998888413332113421288145666889
Q 005554 481 SELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAV-VKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL 557 (691)
Q Consensus 481 a~di~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~~-V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (691)
++++.+.++.+.. .+..++|||+||.++..++...... ...+++.++....... .. .. ....
T Consensus 119 ~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~-~~~~--- 183 (318)
T d1qlwa_ 119 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGS----------MP-TP-NPTV--- 183 (318)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGG----------SC-SS-CHHH---
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC----------HH-HH-HHHH---
T ss_conf 999999999975224444123434236889977640475110104674045653210----------12-34-5667---
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC--CCCCCCHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 9999965999998646898740019999999983279316999999850--13676167651489985899973899999
Q 005554 558 LFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFS--FKLSLPLNYLLEGFKEKVLIIQGIKDPIS 635 (691)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~PvLiI~G~~D~~v 635 (691)
................................+... ..... .............+++|+|+++|++|.++
T Consensus 184 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~ 255 (318)
T d1qlwa_ 184 -----ANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGI---TAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEF 255 (318)
T ss_dssp -----HHHHHHHHHHTSEEEEEEGGGTTHHHHHHHHCCTTE---EEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTC
T ss_pred -----HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHH---HHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCC
T ss_conf -----778888764033210011002302343234323689---998743201354145566631598899824767566
Q ss_pred CHHH--------HHHHHHHHCCCCEEEEE------CCCCCCCCCC-HHHHHHHHHHHHHHHH
Q ss_conf 9267--------99999982798299992------9778988559-6999999999998300
Q 005554 636 DSKS--------KVAMFKEHCAGIVIREL------DAGHCPHDEK-PEEVNSIISEWIVTIE 682 (691)
Q Consensus 636 p~~~--------~~~~~~~~~~~~~~~~~------~agH~~~~e~-pe~v~~~I~~fL~~~~ 682 (691)
|... ..+.+.+...++++..+ ++||+++.|. .+++++.|.+||+++.
T Consensus 256 p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 256 PRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 73566899999999999983999689980655659976806268299999999999997602
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.84 E-value=6.7e-20 Score=134.39 Aligned_cols=224 Identities=17% Similarity=0.128 Sum_probs=141.4
Q ss_pred EEEEECCEEEEEEEECC---C--CCEEEEECCC--CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-----CCC-
Q ss_conf 99988695899998089---9--9959998588--999677999899985089799996899976999999-----577-
Q 005554 409 RIWRWNGYQIQYTVAGK---E--GPAILLVHGF--GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-----IVY- 475 (691)
Q Consensus 409 ~~~~~~g~~i~y~~~g~---~--~p~VIliHG~--~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~-----~~~- 475 (691)
.+-+.+|.+|.....-+ + .|+||++||+ +.....|...+..|+++||.|+++|++|++.+.... ..+
T Consensus 16 ~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~ 95 (260)
T d2hu7a2 16 WVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPC 95 (260)
T ss_dssp EEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTT
T ss_pred EEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 99999997999999807998999229999899875478863139999998523333111011021245543322112220
Q ss_pred --CHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHH
Q ss_conf --899999999999989279678999969369999999995864413689953799888841333211342128814566
Q 005554 476 --TELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLG 553 (691)
Q Consensus 476 --s~~~~a~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (691)
..+++...+..+.+.....++.++|+|+||.+++.++..+|+.+++++..++....... . ...
T Consensus 96 ~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~------~----~~~----- 160 (260)
T d2hu7a2 96 GGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEM------Y----ELS----- 160 (260)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHH------H----HTC-----
T ss_pred HHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHH------H----CCC-----
T ss_conf 0234431012222222232100000002455542221001477433322110011014343------2----013-----
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCC
Q ss_conf 68899999965999998646898740019999999983279316999999850136761676514899858999738999
Q 005554 554 AQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDP 633 (691)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 633 (691)
......+....... ....+.. .+....++++++|+|+++|++|.
T Consensus 161 --------~~~~~~~~~~~~~~---------------------~~~~~~~-------~~~~~~~~~~~~P~liihG~~D~ 204 (260)
T d2hu7a2 161 --------DAAFRNFIEQLTGG---------------------SREIMRS-------RSPINHVDRIKEPLALIHPQNDS 204 (260)
T ss_dssp --------CHHHHHHHHHHHCS---------------------CHHHHHH-------TCGGGCGGGCCSCEEEEEETTCS
T ss_pred --------CCCCCCCCCCCCCC---------------------CCCCCCC-------CCHHHCCCCCCCCCEEEECCCCC
T ss_conf --------34332123354554---------------------3222223-------32000234567971245314676
Q ss_pred CCCHHHHHHHHHHH---CCCCEEEEE-CCCCCCCC-CCHHHHHHHHHHHHHHHHC
Q ss_conf 99926799999982---798299992-97789885-5969999999999983007
Q 005554 634 ISDSKSKVAMFKEH---CAGIVIREL-DAGHCPHD-EKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 634 ~vp~~~~~~~~~~~---~~~~~~~~~-~agH~~~~-e~pe~v~~~I~~fL~~~~~ 683 (691)
++|++...++++.+ ....++.++ ++||.+.. |+...+.+.+.+||+++..
T Consensus 205 ~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 205 RTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp SSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 6448999999999997799869999895998989767699999999999999745
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.82 E-value=5.3e-19 Score=128.96 Aligned_cols=210 Identities=12% Similarity=0.072 Sum_probs=135.9
Q ss_pred EECCCCCEEEEECCC--CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCEEE
Q ss_conf 808999959998588--999677999899985089799996899976999999577899999999999989-27967899
Q 005554 422 VAGKEGPAILLVHGF--GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE-VVGEPVHL 498 (691)
Q Consensus 422 ~~g~~~p~VIliHG~--~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~-l~~~~v~l 498 (691)
..|+.+|+|+|+||. +++...|..++..|... +.|+++|.||+|.++.. ..+++++++.+.+.+.. ....+++|
T Consensus 37 ~~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~~-~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~~~~~P~~L 113 (255)
T d1mo2a_ 37 ADGPGEVTVICCAGTAAISGPHEFTRLAGALRGI-APVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVV 113 (255)
T ss_dssp ECCSCSSEEEEECCCSSSCSGGGGHHHHHHHTTT-CCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCC--CCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 6899988599977898888899999999964899-66999838876789999--89999999999999998679998899
Q ss_pred EEECHHHHHHHHHHHHCC---CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 996936999999999586---44136899537998888413332113421288145666889999996599999864689
Q 005554 499 IGNSIGGYFVAIVACLWP---AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPT 575 (691)
Q Consensus 499 vGhS~GG~ial~~A~~~p---~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (691)
+||||||.+|+.+|.+.+ ..|.+++++++........ ...............
T Consensus 114 ~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~-------------------------~~~~~~~~~~~~~~~ 168 (255)
T d1mo2a_ 114 AGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA-------------------------MNAWLEELTATLFDR 168 (255)
T ss_dssp EECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHH-------------------------HHHHHHHHHTTCC--
T ss_pred EEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-------------------------HHHHHHHHHHHHHCC
T ss_conf 9967747999999985076499850899978999997320-------------------------035899989886322
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC-CCCEEE
Q ss_conf 8740019999999983279316999999850136761676514899858999738999999267999999827-982999
Q 005554 576 RRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC-AGIVIR 654 (691)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~-~~~~~~ 654 (691)
............+. ........+ ....+.+|++++.+.+|....... . ..... ...+++
T Consensus 169 ~~~~~~~~~l~a~~---------~~~~~~~~~--------~~~~~~~p~l~v~a~~~~~~~~~~--~-w~~~~~~~~~~~ 228 (255)
T d1mo2a_ 169 ETVRMDDTRLTALG---------AYDRLTGQW--------RPRETGLPTLLVSAGEPMGPWPDD--S-WKPTWPFEHDTV 228 (255)
T ss_dssp --CCCCHHHHHHHH---------HHHHHHHHC--------CCCCCCCCEEEEECCSSSSCCTTC--C-CCCCCCSSCEEE
T ss_pred CCCCCCHHHHHHHH---------HHHHHHHCC--------CCCCCCCEEEEEECCCCCCCCHHH--H-HHHHCCCCCEEE
T ss_conf 22258989999989---------999998607--------874433047776248988865355--7-987178996899
Q ss_pred EECCCCCCCC-CCHHHHHHHHHHHHH
Q ss_conf 9297789885-596999999999998
Q 005554 655 ELDAGHCPHD-EKPEEVNSIISEWIV 679 (691)
Q Consensus 655 ~~~agH~~~~-e~pe~v~~~I~~fL~ 679 (691)
.++++|+.++ ++++.+++.|.+||.
T Consensus 229 ~v~G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 229 AVPGDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp ECCSCCSSCSSCCHHHHHHHHHHHHT
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 97888725030369999999999868
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=1.1e-18 Score=126.96 Aligned_cols=227 Identities=13% Similarity=0.016 Sum_probs=132.8
Q ss_pred EEEEEECCEEEEEEEECC---C--CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC---------
Q ss_conf 999988695899998089---9--99599985889996779998999850897999968999769999995---------
Q 005554 408 TRIWRWNGYQIQYTVAGK---E--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--------- 473 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~---~--~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~--------- 473 (691)
+.+-..+|.+|+.....+ + .|+||++||++.+...+. ....++++||.|+++|+||+|.|..+..
T Consensus 58 v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~-~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~ 136 (322)
T d1vlqa_ 58 VTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPH-DWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPV 136 (322)
T ss_dssp EEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGG-GGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred EEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHH-HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 999879995899999963688998047999669888857679-9999996898899961233577777754334322334
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHC------CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf ----------------7789999999999998927------967899996936999999999586441368995379988
Q 005554 474 ----------------VYTELMWSELLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 474 ----------------~~s~~~~a~di~~ll~~l~------~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~ 531 (691)
.........++...++.+. ..++.++|+|+||.+++..+...+ +++++|...+....
T Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~ 215 (322)
T d1vlqa_ 137 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 215 (322)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCC-CCCEEEEECCCCCC
T ss_conf 54334323321022210115789999999999998647858111124322343499999974497-85389993774212
Q ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
Q ss_conf 88413332113421288145666889999996599999864689874001999999998327931699999985013676
Q 005554 532 IPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSL 611 (691)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (691)
... ... ...... ............ .......... ...
T Consensus 216 ~~~------~~~-~~~~~~-------------------------------~~~~~~~~~~~~-~~~~~~~~~~----~~~ 252 (322)
T d1vlqa_ 216 FRR------AVQ-LVDTHP-------------------------------YAEITNFLKTHR-DKEEIVFRTL----SYF 252 (322)
T ss_dssp HHH------HHH-HCCCTT-------------------------------HHHHHHHHHHCT-TCHHHHHHHH----HTT
T ss_pred HHH------HHH-HCCCCC-------------------------------HHHHHHHHHCCC-CHHHHHHHHH----HHH
T ss_conf 788------876-335432-------------------------------156776520476-2045677776----665
Q ss_pred CHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 167651489985899973899999926799999982798299992-97789885596999999999998300
Q 005554 612 PLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 612 ~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
+....+.++++|+|+++|.+|.++|++...+.+......++++++ +++|....+ .-.+...+||++..
T Consensus 253 d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 253 DGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS---FQAVEQVKFLKKLF 321 (322)
T ss_dssp CHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC---CCHHHHHHHHHHHH
T ss_conf 6787773179998999768999859899999998779984999979999899642---38999999999974
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.81 E-value=7.9e-18 Score=121.94 Aligned_cols=193 Identities=17% Similarity=0.145 Sum_probs=135.0
Q ss_pred CCCEEEEEEEEC--------CEEEEEEEECCC--CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
Q ss_conf 994179999886--------958999980899--9959998588999677999899985089799996899976999999
Q 005554 403 EGVYSTRIWRWN--------GYQIQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN 472 (691)
Q Consensus 403 ~~~~~~~~~~~~--------g~~i~y~~~g~~--~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~ 472 (691)
.+++....+++. +.+|+|-....+ -|.||++||++++...+..+++.|+++||.|+++|.+|++....
T Consensus 18 ~gp~~~~~~~~~~~~~~g~~~~~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~-- 95 (260)
T d1jfra_ 18 RGPYATSQTSVSSLVASGFGGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD-- 95 (260)
T ss_dssp SCSSCEEEEEECTTTCSSSCCEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH--
T ss_pred CCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH--
T ss_conf 698403688703677676457799975799999712899989999898899999999985799899983188767802--
Q ss_pred CCCCHHHHHHHHHHHHHH------HCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf 577899999999999989------27967899996936999999999586441368995379988884133321134212
Q 005554 473 IVYTELMWSELLRDFTVE------VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQA 546 (691)
Q Consensus 473 ~~~s~~~~a~di~~ll~~------l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~ 546 (691)
....++.+.+..+.+. +...++.++|||+||..++.++...+ ++.++|.+++.....
T Consensus 96 --~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~-------------- 158 (260)
T d1jfra_ 96 --SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDK-------------- 158 (260)
T ss_dssp --HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCC--------------
T ss_pred --HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHC-CCHHHEEEECCCCCC--------------
T ss_conf --437999999999985466541456422479830563568999876513-410010110123321--------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 88145666889999996599999864689874001999999998327931699999985013676167651489985899
Q 005554 547 SGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLI 626 (691)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 626 (691)
...++++|+|+
T Consensus 159 ---------------------------------------------------------------------~~~~~~~P~l~ 169 (260)
T d1jfra_ 159 ---------------------------------------------------------------------TWPELRTPTLV 169 (260)
T ss_dssp ---------------------------------------------------------------------CCTTCCSCEEE
T ss_pred ---------------------------------------------------------------------CCCCCCCCEEE
T ss_conf ---------------------------------------------------------------------22124553157
Q ss_pred EEECCCCCCCHHHHHHHHHHHCC---CCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 97389999992679999998279---8299992-977898855969999999999983007
Q 005554 627 IQGIKDPISDSKSKVAMFKEHCA---GIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 627 I~G~~D~~vp~~~~~~~~~~~~~---~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~ 683 (691)
++|++|.++|++...+.+.+..+ ..++..+ +++|.........+.+.+..||+....
T Consensus 170 i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~ 230 (260)
T d1jfra_ 170 VGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 230 (260)
T ss_dssp EEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred EECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 8358998789789999999854158987899978996677778768999999999999965
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.77 E-value=2.6e-18 Score=124.85 Aligned_cols=106 Identities=25% Similarity=0.333 Sum_probs=92.4
Q ss_pred CCCCCEEEEECCCCCCHH------HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 899995999858899967------79998999850897999968999769999995778999999999999892796789
Q 005554 424 GKEGPAILLVHGFGAFLE------HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVH 497 (691)
Q Consensus 424 g~~~p~VIliHG~~~~~~------~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~ 497 (691)
.+++.||||+||++++.. .|..+.+.|.+.||+|+++|++|+|.|+.+. .+.+++++++.++++.++.++++
T Consensus 5 ~~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~--~~~~~l~~~i~~~~~~~~~~~v~ 82 (319)
T d1cvla_ 5 AATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN--GRGEQLLAYVKQVLAATGATKVN 82 (319)
T ss_dssp TCCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT--SHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCEE
T ss_conf 9999987998888888231000332999999998789989996689989999986--66999999999999984999789
Q ss_pred EEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9996936999999999586441368995379988
Q 005554 498 LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~ 531 (691)
+|||||||.++..++..+|++|+++|+++++...
T Consensus 83 lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~g 116 (319)
T d1cvla_ 83 LIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRG 116 (319)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTC
T ss_pred EEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 9952644799999999784425338998999999
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=7.4e-19 Score=128.12 Aligned_cols=100 Identities=18% Similarity=0.308 Sum_probs=87.1
Q ss_pred EEEEEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99998869589999808999959998588999677999899985089799996899976999999577899999999999
Q 005554 408 TRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF 487 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~l 487 (691)
..|++++|.+|+|.+.| ++|+|||+||.+ ..|. +.|.+ +|+|+++|+||||.|+.+ .++.+++++++.++
T Consensus 3 ~~~~~~~G~~l~y~~~G-~G~pvlllHG~~---~~w~---~~L~~-~yrvi~~DlpG~G~S~~p--~~s~~~~a~~i~~l 72 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVG-KGPPVLLVAEEA---SRWP---EALPE-GYAFYLLDLPGYGRTEGP--RMAPEELAHFVAGF 72 (122)
T ss_dssp EEEEEETTEEEEEEEEC-CSSEEEEESSSG---GGCC---SCCCT-TSEEEEECCTTSTTCCCC--CCCHHHHHHHHHHH
T ss_pred CEEEEECCEEEEEEEEC-CCCCEEEEECCC---CCCC---CCCCC-CEEEEEEECCCCCCCCCC--CCCCCHHHHHHHHH
T ss_conf 64999899799999976-899679994231---3434---34568-739999831455899996--43531157899999
Q ss_pred HHHHCCCCEEEEEECHHHHHHHHHHHHCCC
Q ss_conf 989279678999969369999999995864
Q 005554 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPA 517 (691)
Q Consensus 488 l~~l~~~~v~lvGhS~GG~ial~~A~~~p~ 517 (691)
++.+++++++++||||||.+++.+++..+.
T Consensus 73 l~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 73 AVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHCCC
T ss_conf 997299973799747408899999861602
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.77 E-value=1.1e-16 Score=114.94 Aligned_cols=225 Identities=15% Similarity=0.037 Sum_probs=134.8
Q ss_pred CEEEEEEEECCEEEEEEEECCC-----C--CEEEEECCCCCC-----HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC-
Q ss_conf 4179999886958999980899-----9--959998588999-----67799989998508979999689997699999-
Q 005554 405 VYSTRIWRWNGYQIQYTVAGKE-----G--PAILLVHGFGAF-----LEHYRDNIYDIADGGNRVWAITLLGFGRSEKP- 471 (691)
Q Consensus 405 ~~~~~~~~~~g~~i~y~~~g~~-----~--p~VIliHG~~~~-----~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~- 471 (691)
..+..++..+|.++.|...-++ + |.||++||+++. ...+......++++||.|+.+|++|.+.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~ 82 (258)
T d2bgra2 3 SKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKI 82 (258)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHH
T ss_pred CEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHH
T ss_conf 50688997389689999997988699997569999848977246788667688999983499589851344467752678
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHCC------CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf ----9577899999999999989279------678999969369999999995864413689953799888841333211
Q 005554 472 ----NIVYTELMWSELLRDFTVEVVG------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFS 541 (691)
Q Consensus 472 ----~~~~s~~~~a~di~~ll~~l~~------~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~ 541 (691)
...+...+ .+++..+++.+.. +++.++|+|+||.+++.++..+|+.+...+..++........
T Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 155 (258)
T d2bgra2 83 MHAINRRLGTFE-VEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD------ 155 (258)
T ss_dssp HGGGTTCTTSHH-HHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB------
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC------
T ss_conf 875441003578-8999887777654121321021126753433022122245898336889850222321233------
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCC-
Q ss_conf 3421288145666889999996599999864689874001999999998327931699999985013676167651489-
Q 005554 542 NERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGF- 620 (691)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 620 (691)
.. .. ........ ... ... .... .. ......++
T Consensus 156 ------------~~--------~~--~~~~~~~~-~~~-~~~----------------~~~~---~~----~~~~~~~~~ 188 (258)
T d2bgra2 156 ------------SV--------YT--ERYMGLPT-PED-NLD----------------HYRN---ST----VMSRAENFK 188 (258)
T ss_dssp ------------HH--------HH--HHHHCCCS-TTT-THH----------------HHHH---SC----SGGGGGGGG
T ss_pred ------------CC--------CC--CHHCCCCC-CHH-HHH----------------HHHC---CC----CCCCCCCCC
T ss_conf ------------43--------32--00002466-012-278----------------7522---33----223123345
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHH---HCCCCEEEEE-CCCCCCCC-CCHHHHHHHHHHHHHHHHC
Q ss_conf 98589997389999992679999998---2798299992-97789885-5969999999999983007
Q 005554 621 KEKVLIIQGIKDPISDSKSKVAMFKE---HCAGIVIREL-DAGHCPHD-EKPEEVNSIISEWIVTIES 683 (691)
Q Consensus 621 ~~PvLiI~G~~D~~vp~~~~~~~~~~---~~~~~~~~~~-~agH~~~~-e~pe~v~~~I~~fL~~~~~ 683 (691)
++|+++++|++|..+|+....++++. ...+++++++ +++|.... +..+.+.+.+.+||+++..
T Consensus 189 ~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 189 QVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 256 (258)
T ss_dssp GSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 68700044147985467999999999998799879999799998899874599999999999999726
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.76 E-value=7.6e-15 Score=103.99 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=131.5
Q ss_pred EECCEEEEEEEECC---CCCEEEEECCC---CCC--HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88695899998089---99959998588---999--67799989998508979999689997699999957789999999
Q 005554 412 RWNGYQIQYTVAGK---EGPAILLVHGF---GAF--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483 (691)
Q Consensus 412 ~~~g~~i~y~~~g~---~~p~VIliHG~---~~~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~d 483 (691)
.-...+|......+ ..+++|++||. |++ ......++..|.+.||.++.+|+||.|.|...... ...+. +|
T Consensus 6 ~g~~G~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~-~~~e~-~d 83 (218)
T d2i3da1 6 NGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH-GAGEL-SD 83 (218)
T ss_dssp EETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS-SHHHH-HH
T ss_pred ECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC-CHHHH-HH
T ss_conf 47984379999578889987899979986768967747999999998736905999715766787663566-32678-99
Q ss_pred HHH---HHHHHC--CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 999---998927--967899996936999999999586441368995379988884133321134212881456668899
Q 005554 484 LRD---FTVEVV--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLL 558 (691)
Q Consensus 484 i~~---ll~~l~--~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (691)
... ++.... ..+++++|+|+||.+++.++.+.+. +.+++++.+.......
T Consensus 84 ~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~------------------------ 138 (218)
T d2i3da1 84 AASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDF------------------------ 138 (218)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCC------------------------
T ss_pred HHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHCC-CCCEEECCCCCCCCCH------------------------
T ss_conf 999986641025566650688632589999999974214-4420211466555651------------------------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHH
Q ss_conf 99996599999864689874001999999998327931699999985013676167651489985899973899999926
Q 005554 559 FYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSK 638 (691)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~ 638 (691)
..+....+|+++++|+.|.+++..
T Consensus 139 --------------------------------------------------------~~~~~~~~p~l~i~g~~D~~~~~~ 162 (218)
T d2i3da1 139 --------------------------------------------------------SFLAPCPSSGLIINGDADKVAPEK 162 (218)
T ss_dssp --------------------------------------------------------TTCTTCCSCEEEEEETTCSSSCHH
T ss_pred --------------------------------------------------------HHCCCCCCCCEEEECCCCEECCHH
T ss_conf --------------------------------------------------------111346888525532654024747
Q ss_pred HHHHHHHHHC----CCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 7999999827----98299992-97789885596999999999998300789
Q 005554 639 SKVAMFKEHC----AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIESKV 685 (691)
Q Consensus 639 ~~~~~~~~~~----~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~~~~ 685 (691)
...++.+... ...+++++ +++|+.. .+.+++.+.+.+||+++....
T Consensus 163 ~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 163 DVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLNGE 213 (218)
T ss_dssp HHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCC
T ss_conf 899999998653178743899698997876-999999999999999864977
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=6e-16 Score=110.63 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=118.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC---------C-----CC-CCCCCC---HHHHHHHHHHH
Q ss_conf 999599985889996779998999850897999968999769---------9-----99-995778---99999999999
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGR---------S-----EK-PNIVYT---ELMWSELLRDF 487 (691)
Q Consensus 426 ~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~---------S-----~~-~~~~~s---~~~~a~di~~l 487 (691)
..++||++||+|++...|..++..+...++.+++++-|.... + .. ...... ++...+.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88779997289999889999999854899889948887775023798665566565666633204467788888888887
Q ss_pred HHHH-----CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 9892-----79678999969369999999995864413689953799888841333211342128814566688999999
Q 005554 488 TVEV-----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLR 562 (691)
Q Consensus 488 l~~l-----~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (691)
++.. ..++++++|+|+||.+++.++.++|+++.++|.+++......
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~----------------------------- 150 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA----------------------------- 150 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG-----------------------------
T ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----------------------------
T ss_conf 654554089954306656354068899999740200275122456656522-----------------------------
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 65999998646898740019999999983279316999999850136761676514899858999738999999267999
Q 005554 563 LNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVA 642 (691)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~ 642 (691)
.+..... .....++|+++++|++|.++|.+...+
T Consensus 151 ---------~~~~~~~-------------------------------------~~~~~~~Pvli~hG~~D~~vp~~~~~~ 184 (229)
T d1fj2a_ 151 ---------SFPQGPI-------------------------------------GGANRDISILQCHGDCDPLVPLMFGSL 184 (229)
T ss_dssp ---------GSCSSCC-------------------------------------CSTTTTCCEEEEEETTCSSSCHHHHHH
T ss_pred ---------CCCCCCC-------------------------------------CCCCCCCCEEEEECCCCCEECHHHHHH
T ss_conf ---------2322221-------------------------------------101356720688758897057999999
Q ss_pred HH---HHHC--CCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99---9827--98299992-97789885596999999999998300
Q 005554 643 MF---KEHC--AGIVIREL-DAGHCPHDEKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 643 ~~---~~~~--~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~~~~ 682 (691)
.. +... .+.++++. +.||.+. + +..+.+.+||+++.
T Consensus 185 ~~~~L~~~~~~~~v~~~~~~g~gH~i~---~-~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 185 TVEKLKTLVNPANVTFKTYEGMMHSSC---Q-QEMMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHHSCGGGEEEEEETTCCSSCC---H-HHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCC---H-HHHHHHHHHHHHHC
T ss_conf 999998467898269999699998239---9-99999999999678
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.73 E-value=8.1e-17 Score=115.84 Aligned_cols=200 Identities=10% Similarity=-0.035 Sum_probs=127.4
Q ss_pred CCEEEEECCCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHH
Q ss_conf 9959998588999677--99989998508979999689997699999957789999999999998927967899996936
Q 005554 427 GPAILLVHGFGAFLEH--YRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIG 504 (691)
Q Consensus 427 ~p~VIliHG~~~~~~~--~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~lvGhS~G 504 (691)
+++|||+||++++... |..+.+.|...||.|+.+|++|+|.++. ..+.+++++.+..+++..+.+++.+||||||
T Consensus 31 ~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~---~~sae~la~~i~~v~~~~g~~kV~lVGhS~G 107 (317)
T d1tcaa_ 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSGNNKLPVLTWSQG 107 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEETHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCH---HHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
T ss_conf 9838998998988762159999999986898399855888888936---7689999999999998604784479986705
Q ss_pred HHHHHHHHHHCCC---CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999999995864---4136899537998888413332113421288145666889999996599999864689874001
Q 005554 505 GYFVAIVACLWPA---VVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERAD 581 (691)
Q Consensus 505 G~ial~~A~~~p~---~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (691)
|.++..++..+|+ +|..+|.+++........... .......
T Consensus 108 G~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~-------------------------------~~~~~~~----- 151 (317)
T d1tcaa_ 108 GLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPL-------------------------------DALAVSA----- 151 (317)
T ss_dssp HHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHH-------------------------------HHTTCBC-----
T ss_pred HHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCCCH-------------------------------HHHHCCC-----
T ss_conf 8999999998788310100799947998776510110-------------------------------2330468-----
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHH-HCCCCEEEEE-C--
Q ss_conf 99999999832793169999998501367616765148998589997389999992679999998-2798299992-9--
Q 005554 582 DWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKE-HCAGIVIREL-D-- 657 (691)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~-~~~~~~~~~~-~-- 657 (691)
. ..........+...++. .. ...-.+|++.|++..|.++.+......... ..++++-+.+ +
T Consensus 152 p----a~~q~~~~s~fl~~L~~---~~--------~~~~~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~~~~Ni~vq~~c 216 (317)
T d1tcaa_ 152 P----SVWQQTTGSALTTALRN---AG--------GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVC 216 (317)
T ss_dssp H----HHHHTBTTCHHHHHHHH---TT--------TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHH
T ss_pred C----HHHHHCCCCHHHHHHHH---CC--------CCCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCC
T ss_conf 5----14430577599999874---78--------878887789984377863275301000135677881567862466
Q ss_pred -----CCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -----778988559699999999999830
Q 005554 658 -----AGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 658 -----agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+|..+..+|. +...+.+-|...
T Consensus 217 ~~~~~~~H~~l~~~p~-~~~~v~daL~~~ 244 (317)
T d1tcaa_ 217 GPLFVIDHAGSLTSQF-SYVVGRSALRST 244 (317)
T ss_dssp CTTCCCCTTHHHHBHH-HHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHCC
T ss_conf 7888677204006999-999999987466
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.71 E-value=3.9e-16 Score=111.77 Aligned_cols=181 Identities=17% Similarity=0.189 Sum_probs=118.3
Q ss_pred CEEEEEEEECC---CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCCC-CCCCCCH-------H
Q ss_conf 95899998089---9995999858899967799989998508979999689997-----69999-9957789-------9
Q 005554 415 GYQIQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-----GRSEK-PNIVYTE-------L 478 (691)
Q Consensus 415 g~~i~y~~~g~---~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~-----G~S~~-~~~~~s~-------~ 478 (691)
+..+.|+..+. +.|+||++||++++...|..+++.|.+ ++.+++++.+.. +.... ....... +
T Consensus 8 ~~~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (209)
T d3b5ea1 8 DLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETA 86 (209)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77523475489999988899984999897899999998666-95788511576756676432357866453032899999
Q ss_pred HHHHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 999999999989279--678999969369999999995864413689953799888841333211342128814566688
Q 005554 479 MWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (691)
Q Consensus 479 ~~a~di~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (691)
.+.+.|..+.+..+. ++++++|||+||.+++.++..+|+.+.++|++++.....
T Consensus 87 ~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~------------------------ 142 (209)
T d3b5ea1 87 AFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------------ 142 (209)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------------
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------------
T ss_conf 99999999998718655778999628868999999984997664899907843444------------------------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCC
Q ss_conf 99999965999998646898740019999999983279316999999850136761676514899858999738999999
Q 005554 557 LLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISD 636 (691)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp 636 (691)
.. ......++|+++++|++|.+++
T Consensus 143 --------------------~~------------------------------------~~~~~~~~p~~~~~G~~D~~~~ 166 (209)
T d3b5ea1 143 --------------------HV------------------------------------PATDLAGIRTLIIAGAADETYG 166 (209)
T ss_dssp --------------------SC------------------------------------CCCCCTTCEEEEEEETTCTTTG
T ss_pred --------------------CC------------------------------------CCCCCCCCHHEEEECCCCCCCC
T ss_conf --------------------32------------------------------------2222344300245236898658
Q ss_pred HH--HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 26--799999982798299992977898855969999999999983
Q 005554 637 SK--SKVAMFKEHCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVT 680 (691)
Q Consensus 637 ~~--~~~~~~~~~~~~~~~~~~~agH~~~~e~pe~v~~~I~~fL~~ 680 (691)
.. ...+.+.....+.++++.++||.+. ++ ..+.+.+||..
T Consensus 167 ~~~~~~~~~l~~~G~~v~~~~~~ggH~i~---~~-~~~~~~~wl~~ 208 (209)
T d3b5ea1 167 PFVPALVTLLSRHGAEVDARIIPSGHDIG---DP-DAAIVRQWLAG 208 (209)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEESCCSCCC---HH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC---HH-HHHHHHHHHCC
T ss_conf 89999999999789986999989998789---99-99999998578
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=2.7e-17 Score=118.76 Aligned_cols=102 Identities=19% Similarity=0.232 Sum_probs=88.7
Q ss_pred CCCCCEEEEECCCCCCHH-----HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 899995999858899967-----799989998508979999689997699999957789999999999998927967899
Q 005554 424 GKEGPAILLVHGFGAFLE-----HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHL 498 (691)
Q Consensus 424 g~~~p~VIliHG~~~~~~-----~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~~~v~l 498 (691)
.+.+.||||+||++++.. .|..+.+.|.+.||+|+++|++|+|.+ ....+++.+++.++++..+.+++++
T Consensus 4 ~~~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~-----~~~a~~l~~~i~~~~~~~g~~~v~l 78 (285)
T d1ex9a_ 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS-----EVRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCH-----HHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC-----HHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999989979988785433135499999999868998999679998984-----7779999999999999829974899
Q ss_pred EEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 99693699999999958644136899537998
Q 005554 499 IGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 499 vGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
|||||||.++..++..+|++|+++|+++++..
T Consensus 79 igHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEECCCHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 99795589999999978764505999899999
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.70 E-value=6.3e-15 Score=104.49 Aligned_cols=179 Identities=18% Similarity=0.158 Sum_probs=123.4
Q ss_pred EEEEEECC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC------CCCCCHHH---HHHHHHHH
Q ss_conf 99998089-9995999858899967799989998508979999689997699999------95778999---99999999
Q 005554 418 IQYTVAGK-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP------NIVYTELM---WSELLRDF 487 (691)
Q Consensus 418 i~y~~~g~-~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~------~~~~s~~~---~a~di~~l 487 (691)
++....+. +.|+||++||++++...|..+++.+.+ ++.++.++.+..+..... ......++ ..+.+..+
T Consensus 7 ~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (203)
T d2r8ba1 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADF 85 (203)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 963589999998999978999998899999998656-8749995166556556654223676655366799999999999
Q ss_pred H----HHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 9----892796789999693699999999958644136899537998888413332113421288145666889999996
Q 005554 488 T----VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRL 563 (691)
Q Consensus 488 l----~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (691)
+ ...+.++++++|+|+||.+++.++..+|+.+.+++++++......
T Consensus 86 l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~------------------------------ 135 (203)
T d2r8ba1 86 IKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------ 135 (203)
T ss_dssp HHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------
T ss_pred HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC------------------------------
T ss_conf 98766338986399997558889999999864201123154013323223------------------------------
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHH
Q ss_conf 59999986468987400199999999832793169999998501367616765148998589997389999992679999
Q 005554 564 NISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAM 643 (691)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~ 643 (691)
. ........|+++++|++|.++|.+...+.
T Consensus 136 --------------~------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~ 165 (203)
T d2r8ba1 136 --------------K------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKAL 165 (203)
T ss_dssp --------------C------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHH
T ss_pred --------------C------------------------------------CCCCCCCCHHHCCCCCCCCCCCHHHHHHH
T ss_conf --------------2------------------------------------22222232021155678981169999999
Q ss_pred HHHH---CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9982---7982999929778988559699999999999830
Q 005554 644 FKEH---CAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 644 ~~~~---~~~~~~~~~~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+.+ .-+.++++.++||.+. ++ ..+.+.+||.+.
T Consensus 166 ~~~L~~~g~~v~~~~~~ggH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 166 EESLKAQGGTVETVWHPGGHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp HHHHHHHSSEEEEEEESSCSSCC---HH-HHHHHHHHHGGG
T ss_pred HHHHHHCCCCEEEEEECCCCCCC---HH-HHHHHHHHHHHC
T ss_conf 99999789987999989998689---99-999999999965
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.68 E-value=7.8e-15 Score=103.91 Aligned_cols=191 Identities=15% Similarity=0.115 Sum_probs=126.3
Q ss_pred EEEECCEEEEEEEECC---CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-------------
Q ss_conf 9988695899998089---999599985889996779998999850897999968999769999995-------------
Q 005554 410 IWRWNGYQIQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI------------- 473 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~---~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~------------- 473 (691)
+...+|.++......+ +.|.||++|+..+.......++..|+++||.|+++|+.|.+.......
T Consensus 8 ~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (233)
T d1dina_ 8 IQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKL 87 (233)
T ss_dssp EECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHH
T ss_pred EECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98699999999998899998419999678888898999999999965994020032368876766671777888887777
Q ss_pred --CCCHHHHHHHHHHHHHHHCC-----CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf --77899999999999989279-----67899996936999999999586441368995379988884133321134212
Q 005554 474 --VYTELMWSELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQA 546 (691)
Q Consensus 474 --~~s~~~~a~di~~ll~~l~~-----~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~ 546 (691)
..+.+....++...++.+.. +++.++|+|+||.+++.++... .+.+.+...+....
T Consensus 88 ~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~~--------------- 150 (233)
T d1dina_ 88 WQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGLE--------------- 150 (233)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCGG---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCC--CCCEECCCCCCCCC---------------
T ss_conf 6531157799999999999985788877468997404665112101354--32100122123346---------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 88145666889999996599999864689874001999999998327931699999985013676167651489985899
Q 005554 547 SGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLI 626 (691)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 626 (691)
+......++++|+|+
T Consensus 151 -----------------------------------------------------------------~~~~~~~~i~~Pvl~ 165 (233)
T d1dina_ 151 -----------------------------------------------------------------KQLNKVPEVKHPALF 165 (233)
T ss_dssp -----------------------------------------------------------------GGGGGGGGCCSCEEE
T ss_pred -----------------------------------------------------------------CCHHHHHCCCCCCEE
T ss_conf -----------------------------------------------------------------540133115786234
Q ss_pred EEECCCCCCCHHHHHHHHHHH--CCCCEEEEE-CCCCCCCCCC--------HHHHHHHHHHHHHHHH
Q ss_conf 973899999926799999982--798299992-9778988559--------6999999999998300
Q 005554 627 IQGIKDPISDSKSKVAMFKEH--CAGIVIREL-DAGHCPHDEK--------PEEVNSIISEWIVTIE 682 (691)
Q Consensus 627 I~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~-~agH~~~~e~--------pe~v~~~I~~fL~~~~ 682 (691)
++|++|..+|.+......+.. .++.++++. +++|....+. .++..+.+.+||...+
T Consensus 166 ~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 166 HMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp EEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 4033466799899999999985699889999799983888999765799999999999999987073
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.68 E-value=4.2e-15 Score=105.51 Aligned_cols=171 Identities=19% Similarity=0.137 Sum_probs=118.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC---C---CCCCCHHH-------HHHHHHHHHHHHC
Q ss_conf 999599985889996779998999850897999968999769999---9---95778999-------9999999998927
Q 005554 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK---P---NIVYTELM-------WSELLRDFTVEVV 492 (691)
Q Consensus 426 ~~p~VIliHG~~~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~---~---~~~~s~~~-------~a~di~~ll~~l~ 492 (691)
++|+||++||++++...|..+++.+.+ ++.|++++.+..+.... . ....+.++ +.+.+..+.+..+
T Consensus 13 ~~P~vi~lHG~g~~~~~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 13 SKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 988899978999998899999998650-7734421153258987643234788877547799999999999999987504
Q ss_pred C--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9--67899996936999999999586441368995379988884133321134212881456668899999965999998
Q 005554 493 G--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVK 570 (691)
Q Consensus 493 ~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (691)
. .++.++|+|+||.+++.++..+|+.+.+++++++.....
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~-------------------------------------- 133 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR-------------------------------------- 133 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS--------------------------------------
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCC--------------------------------------
T ss_conf 664433566156523188998875024545305655777765--------------------------------------
Q ss_pred HHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC--
Q ss_conf 646898740019999999983279316999999850136761676514899858999738999999267999999827--
Q 005554 571 QCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC-- 648 (691)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~-- 648 (691)
.. ........|+++++|++|.++|++...+....+.
T Consensus 134 ------~~------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 134 ------GM------------------------------------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp ------SC------------------------------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred ------CC------------------------------------CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf ------22------------------------------------210001201112443688854999999999999978
Q ss_pred -CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -982999929778988559699999999999830
Q 005554 649 -AGIVIRELDAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 649 -~~~~~~~~~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
.+.+++..++||.+ +.+..+.+.+||++.
T Consensus 172 g~~~~~~~~~ggH~~----~~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 172 NANVTMHWENRGHQL----TMGEVEKAKEWYDKA 201 (202)
T ss_dssp TCEEEEEEESSTTSC----CHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCC----CHHHHHHHHHHHHHH
T ss_conf 998799998999968----999999999999974
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=1.8e-14 Score=101.74 Aligned_cols=209 Identities=10% Similarity=0.065 Sum_probs=118.6
Q ss_pred EEEEEEEC-CCCCEEEEECCCC-----CCHHHHHH----HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89999808-9999599985889-----99677999----89998508979999689997699999957789999999999
Q 005554 417 QIQYTVAG-KEGPAILLVHGFG-----AFLEHYRD----NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRD 486 (691)
Q Consensus 417 ~i~y~~~g-~~~p~VIliHG~~-----~~~~~~~~----~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ 486 (691)
++.+...+ +++|+||++||++ .+...|.. +...+.+.||.|+.+|+|..+.... +..+++..+.+..
T Consensus 20 ~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~---~~~~~d~~~~~~~ 96 (263)
T d1vkha_ 20 TLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITR 96 (263)
T ss_dssp CEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHH---HHHHHHHHHHHHC
T ss_conf 4773568899983899987997647888822089999999999972986999950566851134---6777765555421
Q ss_pred HHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCC-----------------EEEEECCCCCCCCCHHHHHHHHHHHCCCH
Q ss_conf 9989279678999969369999999995864413-----------------68995379988884133321134212881
Q 005554 487 FTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVK-----------------SVVLINSAGNVIPEYSFLQFSNERQASGP 549 (691)
Q Consensus 487 ll~~l~~~~v~lvGhS~GG~ial~~A~~~p~~V~-----------------~lIli~~~~~~~~~~~~~~~~~~~~~~~~ 549 (691)
+.+.....+++++|||+||.+++.++...++... ..+..++... .
T Consensus 97 l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 158 (263)
T d1vkha_ 97 LVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYS------------------L 158 (263)
T ss_dssp HHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCC------------------H
T ss_pred CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------------C
T ss_conf 2222333220353237179999999986667421346320002334333111000000112------------------0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEE
Q ss_conf 45666889999996599999864689874001999999998327931699999985013676167651489985899973
Q 005554 550 IRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQG 629 (691)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 629 (691)
..... .......+....+......... ....... .....+..+.+|+++++|
T Consensus 159 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---------~~~~~~~~~~~P~lii~G 210 (263)
T d1vkha_ 159 KELLI------EYPEYDCFTRLAFPDGIQMYEE-------------EPSRVMP---------YVKKALSRFSIDMHLVHS 210 (263)
T ss_dssp HHHHH------HCGGGHHHHHHHCTTCGGGCCC-------------CHHHHHH---------HHHHHHHHHTCEEEEEEE
T ss_pred HHHHH------HCCCCCHHHHCCCCCCCCCCCC-------------CCCCCCC---------CCCCCCCCCCCCEEEEEC
T ss_conf 12443------0233101110223233323344-------------5532375---------200012346787135403
Q ss_pred CCCCCCCHHHHHHHHH---HHCCCCEEEEE-CCCCCCCCCCHHHHHHHHH
Q ss_conf 8999999267999999---82798299992-9778988559699999999
Q 005554 630 IKDPISDSKSKVAMFK---EHCAGIVIREL-DAGHCPHDEKPEEVNSIIS 675 (691)
Q Consensus 630 ~~D~~vp~~~~~~~~~---~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~ 675 (691)
++|.++|++...++.+ +...+.++.+. +++|....++. ++.+.|.
T Consensus 211 ~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~-~~~~~i~ 259 (263)
T d1vkha_ 211 YSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNG-KVAKYIF 259 (263)
T ss_dssp TTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGCH-HHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCH-HHHHHHH
T ss_conf 788626899999999999978998899997979802342682-9999999
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1e-15 Score=109.23 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=125.9
Q ss_pred EEEEEEECCEEEEEEEECCC-------CCEEEEECCCCCC---HHHH--HHHHHHHHCCCCEEEEECCCCCCCCCC----
Q ss_conf 79999886958999980899-------9959998588999---6779--998999850897999968999769999----
Q 005554 407 STRIWRWNGYQIQYTVAGKE-------GPAILLVHGFGAF---LEHY--RDNIYDIADGGNRVWAITLLGFGRSEK---- 470 (691)
Q Consensus 407 ~~~~~~~~g~~i~y~~~g~~-------~p~VIliHG~~~~---~~~~--~~~~~~L~~~G~~Vi~~D~~G~G~S~~---- 470 (691)
+...++.+|.+|+....-+. -|+||++||++++ ...| ......|+++||.|+++|+||.+.+..
T Consensus 4 ~~~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~ 83 (258)
T d1xfda2 4 EYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLH 83 (258)
T ss_dssp CBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHH
T ss_pred EEEEEEECCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
T ss_conf 99998049959999999899869999524999981896615758776755699998549968998412113333266765
Q ss_pred -CCCCC---CHHHHHHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCC----CCCEEEEECCCCCCCCCHHHHHH
Q ss_conf -99577---899999999999989279--678999969369999999995864----41368995379988884133321
Q 005554 471 -PNIVY---TELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGNVIPEYSFLQF 540 (691)
Q Consensus 471 -~~~~~---s~~~~a~di~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~----~V~~lIli~~~~~~~~~~~~~~~ 540 (691)
....+ ...+..+.+..+++.... +++.++|+|+||.+++.++...++ .+...+.+++.........
T Consensus 84 ~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 159 (258)
T d1xfda2 84 EVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS---- 159 (258)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH----
T ss_pred HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCC----
T ss_conf 3203203578899987543102333222110211665814999999996097544114654100145133201344----
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCC-
Q ss_conf 1342128814566688999999659999986468987400199999999832793169999998501367616765148-
Q 005554 541 SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEG- 619 (691)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 619 (691)
......+. ........ +..... ...+.+
T Consensus 160 ----------------------~~~~~~~~-~~~~~~~~---------------------------~~~~s~-~~~~~~~ 188 (258)
T d1xfda2 160 ----------------------AFSERYLG-LHGLDNRA---------------------------YEMTKV-AHRVSAL 188 (258)
T ss_dssp ----------------------HHHHHHHC-CCSSCCSS---------------------------TTTTCT-HHHHTSC
T ss_pred ----------------------CCCCCCCC-CCCCCHHH---------------------------HHCCCH-HHHHHHH
T ss_conf ----------------------32211122-33245677---------------------------630335-6666654
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHH---HCCCCEEEEE-CCCCCCCCC-CHHHHHHHHHHHHHHHH
Q ss_conf 998589997389999992679999998---2798299992-977898855-96999999999998300
Q 005554 620 FKEKVLIIQGIKDPISDSKSKVAMFKE---HCAGIVIREL-DAGHCPHDE-KPEEVNSIISEWIVTIE 682 (691)
Q Consensus 620 i~~PvLiI~G~~D~~vp~~~~~~~~~~---~~~~~~~~~~-~agH~~~~e-~pe~v~~~I~~fL~~~~ 682 (691)
.++|+|+++|+.|..+|++...++.+. ...+.++.++ +++|..... ....+.+.+.+||++..
T Consensus 189 ~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 189 EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02440144257899749799999999999779987999989899899988679999999999999960
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.63 E-value=7.3e-14 Score=98.10 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=88.3
Q ss_pred CCEEEEEEEECCC----CCEEEEECCCCCC-HHH---HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC-CCHHHHHHHH
Q ss_conf 6958999980899----9959998588999-677---99989998508979999689997699999957-7899999999
Q 005554 414 NGYQIQYTVAGKE----GPAILLVHGFGAF-LEH---YRDNIYDIADGGNRVWAITLLGFGRSEKPNIV-YTELMWSELL 484 (691)
Q Consensus 414 ~g~~i~y~~~g~~----~p~VIliHG~~~~-~~~---~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~-~s~~~~a~di 484 (691)
||.+|....+-+. -|+||+.||++.. ... +......|+++||.|+++|.||.|.|.+.... ...+.-..++
T Consensus 14 DGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~~d~~d~ 93 (347)
T d1ju3a2 14 DGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEADAEDT 93 (347)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99899999998699998789999848898655676742178999997899999992188655488110352024568999
Q ss_pred HHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 999989279--67899996936999999999586441368995379988
Q 005554 485 RDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (691)
Q Consensus 485 ~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~ 531 (691)
.+++..... .++.++|+|+||.+++.+|...|..++++|...+....
T Consensus 94 i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 94 LSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCHH
T ss_conf 9977766157862476205402202566653155222245303565034
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.55 E-value=6.1e-13 Score=92.52 Aligned_cols=177 Identities=15% Similarity=0.210 Sum_probs=109.9
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCC--CCEEEEECCCC--------CCCCC-------CCCCCCCH---HHHHHH
Q ss_conf 899995999858899967799989998508--97999968999--------76999-------99957789---999999
Q 005554 424 GKEGPAILLVHGFGAFLEHYRDNIYDIADG--GNRVWAITLLG--------FGRSE-------KPNIVYTE---LMWSEL 483 (691)
Q Consensus 424 g~~~p~VIliHG~~~~~~~~~~~~~~L~~~--G~~Vi~~D~~G--------~G~S~-------~~~~~~s~---~~~a~d 483 (691)
++.+++||++||+|++...|..+.+.|.+. ++.+++++-|. ..... .+...... +.....
T Consensus 11 ~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 11 KPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99981899974899886669999999877487758982689856534588866576566665553331007899999999
Q ss_pred HHHHHH---HHC--CCCEEEEEECHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999998---927--9678999969369999999995-8644136899537998888413332113421288145666889
Q 005554 484 LRDFTV---EVV--GEPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLL 557 (691)
Q Consensus 484 i~~ll~---~l~--~~~v~lvGhS~GG~ial~~A~~-~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (691)
+..+++ ..+ .++++++|+|+||.+++.++.. .+..+.+++.+++.......
T Consensus 91 v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~----------------------- 147 (218)
T d1auoa_ 91 VTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD----------------------- 147 (218)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT-----------------------
T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-----------------------
T ss_conf 999999999847997661776407531789888774233431046420455763110-----------------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCH
Q ss_conf 99999659999986468987400199999999832793169999998501367616765148998589997389999992
Q 005554 558 LFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDS 637 (691)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~ 637 (691)
.... . ....+.|+++++|++|.++|.
T Consensus 148 ------------------~~~~-~-----------------------------------~~~~~~pvl~~hG~~D~vvp~ 173 (218)
T d1auoa_ 148 ------------------ELEL-S-----------------------------------ASQQRIPALCLHGQYDDVVQN 173 (218)
T ss_dssp ------------------TCCC-C-----------------------------------HHHHTCCEEEEEETTCSSSCH
T ss_pred ------------------CCCC-C-----------------------------------HHCCCCCEEEEECCCCCCCCH
T ss_conf ------------------1111-1-----------------------------------011599989983479980589
Q ss_pred HHHHHHHHH---HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 679999998---27982999929778988559699999999999830
Q 005554 638 KSKVAMFKE---HCAGIVIRELDAGHCPHDEKPEEVNSIISEWIVTI 681 (691)
Q Consensus 638 ~~~~~~~~~---~~~~~~~~~~~agH~~~~e~pe~v~~~I~~fL~~~ 681 (691)
+...+..+. ...+.+++..++||... ++..+.+.+||.+.
T Consensus 174 ~~~~~~~~~L~~~g~~~~~~~~~~gH~i~----~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 174 AMGRSAFEHLKSRGVTVTWQEYPMGHEVL----PQEIHDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEESCSSSCC----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC----HHHHHHHHHHHHHH
T ss_conf 99999999999789988999979998168----99999999999986
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.53 E-value=4.8e-13 Score=93.15 Aligned_cols=223 Identities=13% Similarity=-0.015 Sum_probs=116.8
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--------------------CCEEEEEECHH
Q ss_conf 9899985089799996899976999999577899999999999989279--------------------67899996936
Q 005554 445 DNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG--------------------EPVHLIGNSIG 504 (691)
Q Consensus 445 ~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~~--------------------~~v~lvGhS~G 504 (691)
.....|+.+||.|+.+|.||.|.|.+....++.++ .+|..++++-+.. .++.++|+|+|
T Consensus 127 ~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~ 205 (405)
T d1lnsa3 127 SLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYL 205 (405)
T ss_dssp HHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHH
T ss_pred CCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
T ss_conf 55688986798799978887889997554688666-30099999998715633334334432114543874589952899
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCCC
Q ss_conf 999999999586441368995379988884133321134212881456668899999965---99999864689874001
Q 005554 505 GYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLN---ISNFVKQCYPTRRERAD 581 (691)
Q Consensus 505 G~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 581 (691)
|...+.+|...|..++++|..++............ ....................... ....... .....
T Consensus 206 G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 278 (405)
T d1lnsa3 206 GTMAYGAATTGVEGLELILAEAGISSWYNYYRENG--LVRSPGGFPGEDLDVLAALTYSRNLDGADFLKG-----NAEYE 278 (405)
T ss_dssp HHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSS--SBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHH-----HHHHH
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCC--CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHC-----HHHHH
T ss_conf 99999998608865419994476655888754178--400354212556666531466555554002211-----15565
Q ss_pred HHHHHHHHHH-CCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC--CEEEEECC
Q ss_conf 9999999983-27931699999985013676167651489985899973899999926799999982798--29999297
Q 005554 582 DWLISEMLRA-SYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHCAG--IVIRELDA 658 (691)
Q Consensus 582 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~a 658 (691)
.......... ........ +....+....+.+|++|+|+|+|-.|..+++....+.+..+..+ .++.+-+.
T Consensus 279 ~~~~~~~~~~~~~~~~~d~-------~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgpw 351 (405)
T d1lnsa3 279 KRLAEMTAALDRKSGDYNQ-------FWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRG 351 (405)
T ss_dssp HHHHHHHHHHCTTTCCCCH-------HHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESC
T ss_pred HCCCHHHHHHHHCCCCCHH-------HHHHCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 1542034555412332335-------555368535651379888999750688989789999999987379937999588
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHHHH
Q ss_conf 78988559-6999999999998300
Q 005554 659 GHCPHDEK-PEEVNSIISEWIVTIE 682 (691)
Q Consensus 659 gH~~~~e~-pe~v~~~I~~fL~~~~ 682 (691)
+|...... ..++.+.+..|++...
T Consensus 352 ~H~~~~~~~~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 352 AHIYMNSWQSIDFSETINAYFVAKL 376 (405)
T ss_dssp SSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7899765555369999999999986
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.51 E-value=2.1e-11 Score=83.35 Aligned_cols=126 Identities=16% Similarity=0.081 Sum_probs=84.5
Q ss_pred CEEEEEEEE---CCEEEEEEEECCC----CCEEEEECCCCCCH-----------HHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 417999988---6958999980899----99599985889996-----------77999899985089799996899976
Q 005554 405 VYSTRIWRW---NGYQIQYTVAGKE----GPAILLVHGFGAFL-----------EHYRDNIYDIADGGNRVWAITLLGFG 466 (691)
Q Consensus 405 ~~~~~~~~~---~g~~i~y~~~g~~----~p~VIliHG~~~~~-----------~~~~~~~~~L~~~G~~Vi~~D~~G~G 466 (691)
.+..+-+.+ ||++|....+-+. -|+||+.|+++.+. ..+....+.|+++||.|+.+|.||+|
T Consensus 21 ~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g 100 (381)
T d1mpxa2 21 DYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKY 100 (381)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred CCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 86698899989999899999999689997308999756778976565666544432006899999689799998137657
Q ss_pred CCCCCCCC----------C---CHHHHHHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 99999957----------7---899999999999989279--6789999693699999999958644136899537998
Q 005554 467 RSEKPNIV----------Y---TELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 467 ~S~~~~~~----------~---s~~~~a~di~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
.|++.... . ...+..+.+.-+.+.... .++.++|+|+||.+++.+|...|..++++|...+...
T Consensus 101 ~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 101 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred CCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf 8898533152012101320067899999999987535885765045603657788898887535652104323245425
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.49 E-value=1.2e-11 Score=84.79 Aligned_cols=235 Identities=16% Similarity=0.072 Sum_probs=122.9
Q ss_pred CCCEEEEEEEECCEEEEEEEECCC--CCEEEEECCCC---CCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 994179999886958999980899--99599985889---996779998999850-897999968999769999995778
Q 005554 403 EGVYSTRIWRWNGYQIQYTVAGKE--GPAILLVHGFG---AFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYT 476 (691)
Q Consensus 403 ~~~~~~~~~~~~g~~i~y~~~g~~--~p~VIliHG~~---~~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~~~~~~~s 476 (691)
...++...+...+..+..+.+.+. .|.||++||+| ++...+..++..+.. .|+.|+.+|+|......-+ ..
T Consensus 53 ~~~~~~~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p---~~ 129 (311)
T d1jjia_ 53 VERVEDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFP---AA 129 (311)
T ss_dssp CSEEEEEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTT---HH
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC---HH
T ss_conf 544999998679996799997579996089998399876588456323566565417958999304433334452---45
Q ss_pred HHHHHHHHHHH---HHHHCC--CCEEEEEECHHHHHHHHHHHHC----CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 99999999999---989279--6789999693699999999958----64413689953799888841333211342128
Q 005554 477 ELMWSELLRDF---TVEVVG--EPVHLIGNSIGGYFVAIVACLW----PAVVKSVVLINSAGNVIPEYSFLQFSNERQAS 547 (691)
Q Consensus 477 ~~~~a~di~~l---l~~l~~--~~v~lvGhS~GG~ial~~A~~~----p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~ 547 (691)
+++....+..+ .+.++. +++.+.|+|.||.+++.++... .....+.+++.|...............
T Consensus 130 ~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~----- 204 (311)
T d1jjia_ 130 VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFG----- 204 (311)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTS-----
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEECHHHHHHCCCCCCCEEEEECCEEEECCCCCCCCCCC-----
T ss_conf 443244556788769871948558899943368762000011122305665210001122463136753111234-----
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEE
Q ss_conf 81456668899999965999998646898740019999999983279316999999850136761676514899858999
Q 005554 548 GPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLII 627 (691)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI 627 (691)
....................... ........+... ..+-..|++++
T Consensus 205 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~sp~~~-~~~~~pP~li~ 250 (311)
T d1jjia_ 205 ---------------------------EGLWILDQKIMSWFSEQYFSREE------DKFNPLASVIFA-DLENLPPALII 250 (311)
T ss_dssp ---------------------------SSCSSCCHHHHHHHHHHHCSSGG------GGGCTTTSGGGS-CCTTCCCEEEE
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHCCCCCC------CCCCCCCCHHHC-CCCCCCCEEEE
T ss_conf ---------------------------56544657776543320133322------121223212210-00157887999
Q ss_pred EECCCCCCCHH-HHHHHHHHHCCCCEEEEE-CCCCCCCC-----CCHHHHHHHHHHHHH
Q ss_conf 73899999926-799999982798299992-97789885-----596999999999998
Q 005554 628 QGIKDPISDSK-SKVAMFKEHCAGIVIREL-DAGHCPHD-----EKPEEVNSIISEWIV 679 (691)
Q Consensus 628 ~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~-~agH~~~~-----e~pe~v~~~I~~fL~ 679 (691)
+|+.|.+++.. ...+.+++....+++++. +.+|.... ....+..+.|.+||.
T Consensus 251 ~g~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 251 TAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp EEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 82888775899999999998799789999799978463577868999999999999747
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.47 E-value=1.3e-13 Score=96.49 Aligned_cols=184 Identities=14% Similarity=0.068 Sum_probs=108.6
Q ss_pred CEEEEEEE-ECCCCCEEEEECCCC---CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 95899998-089999599985889---99677999899985089799996899976999999577899999999999989
Q 005554 415 GYQIQYTV-AGKEGPAILLVHGFG---AFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE 490 (691)
Q Consensus 415 g~~i~y~~-~g~~~p~VIliHG~~---~~~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~ 490 (691)
..++-... .+.+.|+||++||++ ++...|..++..|+++||.|+.+|+|..+.. +.....+|+.+.++.
T Consensus 49 ~~~lDiy~P~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~-------~~p~~~~d~~~a~~~ 121 (261)
T d2pbla1 49 RHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV-------RISEITQQISQAVTA 121 (261)
T ss_dssp TCEEEEECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS-------CHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC-------CCCHHHHHHHHHHHH
T ss_conf 7279986348887875999899987338856732577777507902660563101235-------682267799999999
Q ss_pred H---CCCCEEEEEECHHHHHHHHHHHHCC------CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 2---7967899996936999999999586------441368995379988884133321134212881456668899999
Q 005554 491 V---VGEPVHLIGNSIGGYFVAIVACLWP------AVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYL 561 (691)
Q Consensus 491 l---~~~~v~lvGhS~GG~ial~~A~~~p------~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (691)
+ ...+++++|||.||.++..++.... ..+++++.+++.....+... ...
T Consensus 122 ~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------------ 179 (261)
T d2pbla1 122 AAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR----------TSM------------ 179 (261)
T ss_dssp HHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG----------STT------------
T ss_pred HHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHCHHHHHCCCCCCCCCHHHH----------HHH------------
T ss_conf 9853657628997056878999986474000111202002201334223531333----------332------------
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 96599999864689874001999999998327931699999985013676167651489985899973899999926799
Q 005554 562 RLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKV 641 (691)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 641 (691)
...+... .. ... . ..+ .........|+++++|++|..++.+...
T Consensus 180 --------~~~~~~~-----~~---~~~-------------~------~SP-~~~~~~~~~P~li~~G~~D~~~~~~qs~ 223 (261)
T d2pbla1 180 --------NEKFKMD-----AD---AAI-------------A------ESP-VEMQNRYDAKVTVWVGGAERPAFLDQAI 223 (261)
T ss_dssp --------HHHHCCC-----HH---HHH-------------H------TCG-GGCCCCCSCEEEEEEETTSCHHHHHHHH
T ss_pred --------CCCCCCC-----HH---HHH-------------H------HCC-HHHCCCCCCEEEEEEECCCCCHHHHHHH
T ss_conf --------0233589-----89---998-------------7------394-5222557980899983678836799999
Q ss_pred HHHHHHCCCCEEEEE-CCCCCCCCC
Q ss_conf 999982798299992-977898855
Q 005554 642 AMFKEHCAGIVIREL-DAGHCPHDE 665 (691)
Q Consensus 642 ~~~~~~~~~~~~~~~-~agH~~~~e 665 (691)
+ +.+... +..+++ +.+|+-.++
T Consensus 224 ~-~~~~l~-~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 224 W-LVEAWD-ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp H-HHHHHT-CEEEEETTCCTTTTTG
T ss_pred H-HHHHHC-CCCEEECCCCCHHHHH
T ss_conf 9-999728-8925818999304777
|
| >d1np7a1 a.99.1.1 (A:205-483) Cryptochrome C-terminal domain {Synechocystis sp., pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: Cryptochrome C-terminal domain species: Synechocystis sp., pcc 6803 [TaxId: 1143]
Probab=99.46 E-value=2.4e-14 Score=101.03 Aligned_cols=70 Identities=33% Similarity=0.516 Sum_probs=58.7
Q ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 230571688999999998422789881699999851002799986433334322125564257889999875321887
Q 005554 289 TVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKERNAG 366 (691)
Q Consensus 289 ~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~lSpyl~~g~~s~~~~~~~~~~~~~~~~~~ 366 (691)
.|+|||++|+++|++||. ..+++..|...||. .++.++||+|||||+||+||+|+|++++.++......+
T Consensus 7 ~f~gGe~~Al~~L~~Fl~--~~~~l~~Y~~~Rn~------~~~~~~~S~LSPyL~~G~LS~rev~~~~~~~~~~~~~~ 76 (279)
T d1np7a1 7 AFQGGETAGLARLQDYFW--HGDRLKDYKETRNG------MVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVSN 76 (279)
T ss_dssp CCCCSHHHHHHHHHHHHT--TSCCGGGHHHHTTC------CSSSTTSCCCHHHHHTTSSCHHHHHHHHHHHHHHTCCS
T ss_pred CCCCHHHHHHHHHHHHHH--CCCCHHHHHHHCCC------CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 978759999999999986--15352136675479------88878863147988288457999999999875213323
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.44 E-value=3.6e-12 Score=87.88 Aligned_cols=244 Identities=14% Similarity=0.047 Sum_probs=123.6
Q ss_pred EEEECCEEEEEEEECC---C--CCEEEEECCCCC---C--HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC-CCCCCHH
Q ss_conf 9988695899998089---9--995999858899---9--67799989998508979999689997699999-9577899
Q 005554 410 IWRWNGYQIQYTVAGK---E--GPAILLVHGFGA---F--LEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-NIVYTEL 478 (691)
Q Consensus 410 ~~~~~g~~i~y~~~g~---~--~p~VIliHG~~~---~--~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~-~~~~s~~ 478 (691)
+...+|..|....+-+ + .|.||++||+|- + ...+..++..+++.|+.|+.+|+|..+..... ..+..++
T Consensus 84 i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~~l~ 163 (358)
T d1jkma_ 84 ILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVE 163 (358)
T ss_dssp EECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHH
T ss_pred EECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHH
T ss_conf 96789988899999417888898749996387104066542221067888875100133000001246565677733567
Q ss_pred HHHHHHHHHH---HHHCCCCEEEEEECHHHHHHHHHHHH-----CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 9999999999---89279678999969369999999995-----864413689953799888841333211342128814
Q 005554 479 MWSELLRDFT---VEVVGEPVHLIGNSIGGYFVAIVACL-----WPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPI 550 (691)
Q Consensus 479 ~~a~di~~ll---~~l~~~~v~lvGhS~GG~ial~~A~~-----~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (691)
+....+..+. ..++.++++++|+|-||.+++.++.. ....+.++++..|...............
T Consensus 164 D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-------- 235 (358)
T d1jkma_ 164 DCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLT-------- 235 (358)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHH--------
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHCC--------
T ss_conf 778888899872324687540344446726799999999765278765422234552113665764111102--------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEC
Q ss_conf 56668899999965999998646898740019999999983279316999999850136761676514899858999738
Q 005554 551 RLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGI 630 (691)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~ 630 (691)
......... ....................... . ...... .......... -.|+++++|+
T Consensus 236 -------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~-~p~~~~-~~a~~~~~~~-lPp~li~~g~ 294 (358)
T d1jkma_ 236 -------------ELPSLVEND----GYFIENGGMALLVRAYDPTGEHA-E-DPIAWP-YFASEDELRG-LPPFVVAVNE 294 (358)
T ss_dssp -------------HCTHHHHTT----TSSSCHHHHHHHHHHHSSSSTTT-T-CTTTCG-GGCCHHHHTT-CCCEEEEEET
T ss_pred -------------CCCCHHCCC----CCCCCHHHHHHHHHHCCCCCCCC-C-CCCCCC-CCCCHHHCCC-CCCEEEEECC
T ss_conf -------------342100023----44455166666776427755774-5-730023-4530110258-9998999878
Q ss_pred CCCCCCHH-HHHHHHHHHCCCCEEEEE-CCCCCCC---C----CCHHHHHHHHHHHHHHHH
Q ss_conf 99999926-799999982798299992-9778988---5----596999999999998300
Q 005554 631 KDPISDSK-SKVAMFKEHCAGIVIREL-DAGHCPH---D----EKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 631 ~D~~vp~~-~~~~~~~~~~~~~~~~~~-~agH~~~---~----e~pe~v~~~I~~fL~~~~ 682 (691)
.|.+.+.. ...+.+++....+++++. +.+|... . +..+++.+.|..|+....
T Consensus 295 ~D~l~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 295 LDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp TCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8778799999999999879958999979896463542466697899999999999999897
|
| >d1owla1 a.99.1.1 (A:205-475) C-terminal domain of DNA photolyase {Synechococcus elongatus [TaxId: 32046]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Synechococcus elongatus [TaxId: 32046]
Probab=99.41 E-value=3.9e-14 Score=99.71 Aligned_cols=61 Identities=21% Similarity=0.236 Sum_probs=53.9
Q ss_pred EECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 305716889999999984227898816999998510027999864333343221255642578899998753
Q 005554 290 VGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEK 361 (691)
Q Consensus 290 ~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~lSpyl~~g~~s~~~~~~~~~~~~~ 361 (691)
++|||.+|+++|+.|+ .+++.+|++.|| .|+.++||+|||||+||+||+|+|++.+.+...
T Consensus 2 ~~pGE~~Al~~L~~Fl----~~~l~~Y~~~Rn-------~p~~~~tS~LSPyL~fG~IS~R~v~~~~~~~~~ 62 (271)
T d1owla1 2 VEPGETAAIARLQEFC----DRAIADYDPQRN-------FPAEAGTSGLSPALKFGAIGIRQAWQAASAAHA 62 (271)
T ss_dssp SCSSHHHHHHHHHHHH----HTGGGGHHHHTT-------CTTSCCSCCCHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH----HHHHHHHCCCCC-------CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 8813999999999999----878776320038-------988778714788884580679999999987500
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.41 E-value=9.9e-11 Score=79.25 Aligned_cols=243 Identities=15% Similarity=0.008 Sum_probs=113.8
Q ss_pred CCCEEEEEEEEC---C-EEEEE--EE-ECCC--CCEEEEECCCC---CCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCC
Q ss_conf 994179999886---9-58999--98-0899--99599985889---996779998999850-89799996899976999
Q 005554 403 EGVYSTRIWRWN---G-YQIQY--TV-AGKE--GPAILLVHGFG---AFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSE 469 (691)
Q Consensus 403 ~~~~~~~~~~~~---g-~~i~y--~~-~g~~--~p~VIliHG~~---~~~~~~~~~~~~L~~-~G~~Vi~~D~~G~G~S~ 469 (691)
...++.+.+.+. | .++.. .. .+.+ .|.||++||++ ++...+..++..++. .||.|+.+|++......
T Consensus 45 ~~~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~ 124 (317)
T d1lzla_ 45 FDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT 124 (317)
T ss_dssp CTTEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 77735999997268998247999978998899974899963764333553311057776776508741113344221345
Q ss_pred CCCCCCCHHHHHHHH---HHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCC----CCCEEEEECCCCCCCCCHHHHHH
Q ss_conf 999577899999999---999989279--678999969369999999995864----41368995379988884133321
Q 005554 470 KPNIVYTELMWSELL---RDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGNVIPEYSFLQF 540 (691)
Q Consensus 470 ~~~~~~s~~~~a~di---~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~----~V~~lIli~~~~~~~~~~~~~~~ 540 (691)
.+. .+++..+.+ ....+.++. ++++++|+|.||.+++.++...++ .....++..+...........
T Consensus 125 ~~~---~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-- 199 (317)
T d1lzla_ 125 FPG---PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSM-- 199 (317)
T ss_dssp TTH---HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHH--
T ss_pred CCC---CCCCCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 664---333221100378877988398878989999535107999998654440666543333346531111223221--
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCC
Q ss_conf 13421288145666889999996599999864689874001999999998327931699999985013676167651489
Q 005554 541 SNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGF 620 (691)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 620 (691)
.............. ............. ... .+. ......+........
T Consensus 200 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~--------------~~~---------~~~~~~~~~~~~~~~ 247 (317)
T d1lzla_ 200 TNFVDTPLWHRPNA-------ILSWKYYLGESYS--GPE--------------DPD---------VSIYAAPSRATDLTG 247 (317)
T ss_dssp HHCSSCSSCCHHHH-------HHHHHHHHCTTCC--CTT--------------CSC---------CCTTTCGGGCSCCTT
T ss_pred CCCCCCCHHHHHHH-------HHHHHHHCCCCCC--CCC--------------CCH---------HCCCCCCHHHHHCCC
T ss_conf 02356504544446-------7777641143446--777--------------811---------021347134432137
Q ss_pred CCCEEEEEECCCCCCCHH-HHHHHHHHHCCCCEEEEE-CCCCCCCC-CC---HHHHHHHHHHHHHHHH
Q ss_conf 985899973899999926-799999982798299992-97789885-59---6999999999998300
Q 005554 621 KEKVLIIQGIKDPISDSK-SKVAMFKEHCAGIVIREL-DAGHCPHD-EK---PEEVNSIISEWIVTIE 682 (691)
Q Consensus 621 ~~PvLiI~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~-~agH~~~~-e~---pe~v~~~I~~fL~~~~ 682 (691)
..|+++++|+.|.+.+.. ...+.+++....++++++ +++|.... .. .+...+.+.+||++..
T Consensus 248 ~pp~li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~L 315 (317)
T d1lzla_ 248 LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 315 (317)
T ss_dssp CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99759997787788799999999999879988999979396577026875588999999999999985
|
| >d1dnpa1 a.99.1.1 (A:201-469) C-terminal domain of DNA photolyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=3.7e-14 Score=99.85 Aligned_cols=62 Identities=10% Similarity=0.118 Sum_probs=54.3
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 0571688999999998422789881699999851002799986433334322125564257889999875321
Q 005554 291 GGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEKER 363 (691)
Q Consensus 291 ~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~lSpyl~~g~~s~~~~~~~~~~~~~~~ 363 (691)
++||.+|+++|+.|+ .+++.+|.+.|| .|+.++||+|||||+||+||+|+|++.+.+.....
T Consensus 1 P~Ge~aAl~~L~~Fl----~~~l~~Y~~~Rn-------~p~~~~tSrLSPyL~~G~ISprev~~~v~~~~~~~ 62 (269)
T d1dnpa1 1 PVEEKAAIAQLRQFC----QNGAGEYEQQRD-------FPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQA 62 (269)
T ss_dssp CCSHHHHHHHHHHHH----HTHHHHHHHHTT-------CTTSCCSCCCHHHHHHTSSCHHHHHHHHHHHCGGG
T ss_pred CCCHHHHHHHHHHHH----HHHHHHHHHHCC-------CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 988999999999999----858888767538-------98988980676877688588999999999750000
|
| >d1u3da1 a.99.1.1 (A:198-497) Cryptochrome C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: Cryptochrome C-terminal domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.37 E-value=6.6e-14 Score=98.36 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=53.9
Q ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 230571688999999998422789881699999851002799986433334322125564257889999875
Q 005554 289 TVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE 360 (691)
Q Consensus 289 ~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~lSpyl~~g~~s~~~~~~~~~~~~ 360 (691)
.|.+||.+|+++|++|| .+++.+|...|| .|..++||+|||||+||+||+|+|++.+....
T Consensus 15 ~W~pGe~~A~~~L~~Fl----~~~l~~Y~~~Rn-------~p~~~~tSrLSPyL~~G~IS~ReV~~~v~~~~ 75 (300)
T d1u3da1 15 AWSPGWSNGDKALTTFI----NGPLLEYSKNRR-------KADSATTSFLSPHLHFGEVSVRKVFHLVRIKQ 75 (300)
T ss_dssp HCCCSHHHHHHHHHHHH----TTGGGGTTTTTT-------CSSSTTSCCCHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----HHHHHHHHHHCC-------CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
T ss_conf 68866999999999999----803777756348-------98866875146878289887999999999887
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.34 E-value=5.1e-11 Score=80.99 Aligned_cols=239 Identities=15% Similarity=0.022 Sum_probs=121.9
Q ss_pred CCEEEEEEEECCEEEEEEEECCC-----CCEEEEECCCC---CCHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCC
Q ss_conf 94179999886958999980899-----99599985889---9967799989998508-979999689997699999957
Q 005554 404 GVYSTRIWRWNGYQIQYTVAGKE-----GPAILLVHGFG---AFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIV 474 (691)
Q Consensus 404 ~~~~~~~~~~~g~~i~y~~~g~~-----~p~VIliHG~~---~~~~~~~~~~~~L~~~-G~~Vi~~D~~G~G~S~~~~~~ 474 (691)
..+....+..+|.+|....+-++ .|.||++||++ ++...+..++..++.+ ++.|+.+|++....... .
T Consensus 44 ~~~~~~~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~---p 120 (308)
T d1u4na_ 44 AEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF---P 120 (308)
T ss_dssp SEEEEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT---T
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC---C
T ss_conf 7579999955995599999833434799877999926725421123332112232102344334320011222234---4
Q ss_pred CCHHHHHHHHHHHHHHH---CC--CCEEEEEECHHHHHHHHHHHHCCC----CCCEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 78999999999999892---79--678999969369999999995864----4136899537998888413332113421
Q 005554 475 YTELMWSELLRDFTVEV---VG--EPVHLIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGNVIPEYSFLQFSNERQ 545 (691)
Q Consensus 475 ~s~~~~a~di~~ll~~l---~~--~~v~lvGhS~GG~ial~~A~~~p~----~V~~lIli~~~~~~~~~~~~~~~~~~~~ 545 (691)
...++..+.+..+.++. +. +++++.|+|.||.+++.++....+ .+.+..++.+................ .
T Consensus 121 ~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 199 (308)
T d1u4na_ 121 AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEEN-A 199 (308)
T ss_dssp HHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHHHT-S
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC-C
T ss_conf 322212555557887687607885218996056520567788876555067774301002554453456651011103-5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEE
Q ss_conf 28814566688999999659999986468987400199999999832793169999998501367616765148998589
Q 005554 546 ASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVL 625 (691)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 625 (691)
....... ................. ............. .-..|++
T Consensus 200 ~~~~~~~----------~~~~~~~~~~~~~~~~~-------------------------~~~~~s~~~~~d~-~~~Pp~l 243 (308)
T d1u4na_ 200 EGYLLTG----------GMSLWFLDQYLNSLEEL-------------------------THPWFSPVLYPDL-SGLPPAY 243 (308)
T ss_dssp SSSSSCH----------HHHHHHHHHHCSSGGGG-------------------------GCTTTCGGGCSCC-TTCCCEE
T ss_pred CCCCCCC----------HHHHHHHHCCCCCCCCC-------------------------CCHHHHHHHCHHH-CCCCCEE
T ss_conf 4323551----------23321011025751001-------------------------3524442213545-2799703
Q ss_pred EEEECCCCCCCHH-HHHHHHHHHCCCCEEEEE-CCCCCCCC-----CCHHHHHHHHHHHHHHHH
Q ss_conf 9973899999926-799999982798299992-97789885-----596999999999998300
Q 005554 626 IIQGIKDPISDSK-SKVAMFKEHCAGIVIREL-DAGHCPHD-----EKPEEVNSIISEWIVTIE 682 (691)
Q Consensus 626 iI~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~-~agH~~~~-----e~pe~v~~~I~~fL~~~~ 682 (691)
+++|+.|.+++.. ...+.+++....+++.++ +.+|.... ....+..+.+.+||++..
T Consensus 244 i~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 244 IATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp EEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7844867766899999999998899889999798977372057899899999999999999965
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.31 E-value=4.2e-10 Score=75.46 Aligned_cols=118 Identities=14% Similarity=0.051 Sum_probs=80.3
Q ss_pred ECCEEEEEEEECCC----CCEEEEECCCCCC------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC--
Q ss_conf 86958999980899----9959998588999------------67799989998508979999689997699999957--
Q 005554 413 WNGYQIQYTVAGKE----GPAILLVHGFGAF------------LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIV-- 474 (691)
Q Consensus 413 ~~g~~i~y~~~g~~----~p~VIliHG~~~~------------~~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~-- 474 (691)
-||.+|+...+-+. -|+||+.|+++.. ..........|+++||.|+.+|.||.|.|.+....
T Consensus 36 rDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~ 115 (385)
T d2b9va2 36 RDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTR 115 (385)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTC
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECC
T ss_conf 99988999999718999601899981678887655677532235443057999996896899976774368898512045
Q ss_pred --------C---CHHHHHHHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf --------7---899999999999989279--6789999693699999999958644136899537998
Q 005554 475 --------Y---TELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 475 --------~---s~~~~a~di~~ll~~l~~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
+ ..++..+.+.-+.+.... .++.++|+|+||.+++.+|...|..+++++...+...
T Consensus 116 ~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 116 PPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 210011220155787799999999856674446410045667899999998546776349998124565
|
| >d2j07a1 a.99.1.1 (A:172-405) C-terminal domain of DNA photolyase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Thermus thermophilus [TaxId: 274]
Probab=99.30 E-value=4.1e-13 Score=93.59 Aligned_cols=59 Identities=25% Similarity=0.354 Sum_probs=51.9
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 0571688999999998422789881699999851002799986433334322125564257889999875
Q 005554 291 GGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE 360 (691)
Q Consensus 291 ~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~~~~~~~~~~~~~~tS~lSpyl~~g~~s~~~~~~~~~~~~ 360 (691)
.+||.+|+++|++|+ .+++.+|++.|| .|..++||+|||||+||+||+|+|++++.+..
T Consensus 5 ~pGe~~Al~~L~~Fl----~~~l~~Y~~~Rn-------~p~~~~tS~LSPyL~~G~LS~r~v~~~~~~~~ 63 (234)
T d2j07a1 5 EPGEEAALAGLRAFL----EAKLPRYAEERD-------RLDGEGGSRLSPYFALGVLSPRLAAWEAERRG 63 (234)
T ss_dssp CCSHHHHHHHHHHHH----HHTGGGHHHHTT-------CTTCTTSCCCHHHHHTTSSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHH----HHHHHHHHHHCC-------CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHC
T ss_conf 844999999999999----978778767568-------88887875468988068785999999986420
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.26 E-value=6.4e-09 Score=68.36 Aligned_cols=234 Identities=14% Similarity=0.032 Sum_probs=118.8
Q ss_pred EEEEEECCEEEEEEEECC-------CCCEEEEECCCCCCH---HHHHHHHHHHHCCCCEEEEECCCCCCCCCC----CCC
Q ss_conf 999988695899998089-------999599985889996---779998999850897999968999769999----995
Q 005554 408 TRIWRWNGYQIQYTVAGK-------EGPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGFGRSEK----PNI 473 (691)
Q Consensus 408 ~~~~~~~g~~i~y~~~g~-------~~p~VIliHG~~~~~---~~~~~~~~~L~~~G~~Vi~~D~~G~G~S~~----~~~ 473 (691)
+.+-+.||.+|.....-+ +-|.||++||.+... .........+...++-+...+..+...... ...
T Consensus 10 v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (280)
T d1qfma2 10 IFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGI 89 (280)
T ss_dssp EEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTS
T ss_pred EEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHCCC
T ss_conf 99999999799999997699898898479999799985457787322444431135213301224665444113330211
Q ss_pred CCCHHHHHHHHHH----HHHHHC--CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 7789999999999----998927--9678999969369999999995864413689953799888841333211342128
Q 005554 474 VYTELMWSELLRD----FTVEVV--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQAS 547 (691)
Q Consensus 474 ~~s~~~~a~di~~----ll~~l~--~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~~~~~~~~~~~~~~ 547 (691)
........++... ...... .......|.|.||..+...+...++.+.+++...+...........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 160 (280)
T d1qfma2 90 LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT--------- 160 (280)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST---------
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHEEEECCCCCHHHHCCCC---------
T ss_conf 12344432013345666655300023432010353332101111001010221113301235254312453---------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEE
Q ss_conf 81456668899999965999998646898740019999999983279316999999850136761676514899858999
Q 005554 548 GPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLII 627 (691)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI 627 (691)
..... ......... .... .......... ..+..........|+|++
T Consensus 161 ~~~~~----------------~~~~~~~~~----~~~~-------------~~~~~~~~~~-~~s~~~~~~~~~pP~Lii 206 (280)
T d1qfma2 161 IGHAW----------------TTDYGCSDS----KQHF-------------EWLIKYSPLH-NVKLPEADDIQYPSMLLL 206 (280)
T ss_dssp TGGGG----------------HHHHCCTTS----HHHH-------------HHHHHHCGGG-CCCCCSSTTCCCCEEEEE
T ss_pred CCCCC----------------EECCCCCCC----CCCC-------------CCCCCCCCCC-CCCHHHHCCCCCCCEEEE
T ss_conf 43310----------------000247776----3221-------------1100135200-256355414578846985
Q ss_pred EECCCCCCCHHHHHHHHHHH----------CCCCEEEEE-CCCCCCCCCCH--HHHHHHHHHHHHHHHCC
Q ss_conf 73899999926799999982----------798299992-97789885596--99999999999830078
Q 005554 628 QGIKDPISDSKSKVAMFKEH----------CAGIVIREL-DAGHCPHDEKP--EEVNSIISEWIVTIESK 684 (691)
Q Consensus 628 ~G~~D~~vp~~~~~~~~~~~----------~~~~~~~~~-~agH~~~~e~p--e~v~~~I~~fL~~~~~~ 684 (691)
+|++|..+|.....++.+.+ ...++++++ ++||....... .+....+.+||++....
T Consensus 207 hG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~ 276 (280)
T d1qfma2 207 TADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 276 (280)
T ss_dssp EETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2566799797999999999998545641379758999819499999974879999999999999986399
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.25 E-value=3.9e-09 Score=69.64 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=82.9
Q ss_pred CCEEEEEEEECCCCCEEEEECCCCC--CHHHHHH---HHHHHHCCCCEEEEECCCCCCCCC---------CCCCCCCHHH
Q ss_conf 6958999980899995999858899--9677999---899985089799996899976999---------9995778999
Q 005554 414 NGYQIQYTVAGKEGPAILLVHGFGA--FLEHYRD---NIYDIADGGNRVWAITLLGFGRSE---------KPNIVYTELM 479 (691)
Q Consensus 414 ~g~~i~y~~~g~~~p~VIliHG~~~--~~~~~~~---~~~~L~~~G~~Vi~~D~~G~G~S~---------~~~~~~s~~~ 479 (691)
-|.+|.....+.+.|+|+|+||.++ +...|.. +.+.+.+.|+.||.+|-...+... ........++
T Consensus 16 ~~r~i~~~~~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (280)
T d1dqza_ 16 MGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWET 95 (280)
T ss_dssp TTEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHH
T ss_pred CCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 79700278608999889978999988864224325639999974893899978888776754467754356776505899
Q ss_pred -HHHHHHHHHHHH---CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf -999999999892---796789999693699999999958644136899537998
Q 005554 480 -WSELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 480 -~a~di~~ll~~l---~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
+.+++...++.. ..+++.+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 96 ~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 96 FLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 9999989999972588978559999662889999998748374449998067557
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.24 E-value=3.3e-09 Score=70.11 Aligned_cols=197 Identities=12% Similarity=0.013 Sum_probs=108.3
Q ss_pred CCCEEEEEEE--ECCEEEEEEEECCC-------CCEEEEECCCCCCHHHHH-------HHHHHHHCCC----CEEEEECC
Q ss_conf 9941799998--86958999980899-------995999858899967799-------9899985089----79999689
Q 005554 403 EGVYSTRIWR--WNGYQIQYTVAGKE-------GPAILLVHGFGAFLEHYR-------DNIYDIADGG----NRVWAITL 462 (691)
Q Consensus 403 ~~~~~~~~~~--~~g~~i~y~~~g~~-------~p~VIliHG~~~~~~~~~-------~~~~~L~~~G----~~Vi~~D~ 462 (691)
.|.++...+. ..|.++.|..+-+. -|.|+++||.+++...|. .....+...+ +.+...+.
T Consensus 19 ~g~~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (255)
T d1jjfa_ 19 RGQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNT 98 (255)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECC
T ss_pred CEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 66899999974688988899999699989889986899983489876776666677899999877634677610110112
Q ss_pred CCCCCCCCCCC---CCCHHHHHHHHHHHHHHHC-----CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 99769999995---7789999999999998927-----967899996936999999999586441368995379988884
Q 005554 463 LGFGRSEKPNI---VYTELMWSELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPE 534 (691)
Q Consensus 463 ~G~G~S~~~~~---~~s~~~~a~di~~ll~~l~-----~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~~~ 534 (691)
+....... ........+++...++... .+.+.++|+|+||..++.++.++|+++++++.+++.......
T Consensus 99 ---~~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~ 175 (255)
T d1jjfa_ 99 ---NAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN 175 (255)
T ss_dssp ---CCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH
T ss_pred ---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
T ss_conf ---35445554233204789999999999985022344332676304643678999997588856099998257677531
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHH
Q ss_conf 13332113421288145666889999996599999864689874001999999998327931699999985013676167
Q 005554 535 YSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQCYPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLN 614 (691)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (691)
. ..+.. . .
T Consensus 176 ~-----------------------------------~~~~~-~------------------------------------~ 183 (255)
T d1jjfa_ 176 E-----------------------------------RLFPD-G------------------------------------G 183 (255)
T ss_dssp H-----------------------------------HHCTT-T------------------------------------T
T ss_pred C-----------------------------------CCCCC-H------------------------------------H
T ss_conf 2-----------------------------------23524-7------------------------------------8
Q ss_pred HHHCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 651489985899973899999926-799999982798299992-97789885596999999999998
Q 005554 615 YLLEGFKEKVLIIQGIKDPISDSK-SKVAMFKEHCAGIVIREL-DAGHCPHDEKPEEVNSIISEWIV 679 (691)
Q Consensus 615 ~~l~~i~~PvLiI~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~-~agH~~~~e~pe~v~~~I~~fL~ 679 (691)
........|+++.+|++|..++.. ...+.+.+..-..++.+. ++||... ...+.+.+||+
T Consensus 184 ~~~~~~~~~~~i~~G~~D~~~~~~~~~~~~L~~~g~~~~~~~~~~ggH~~~-----~W~~~l~~fl~ 245 (255)
T d1jjfa_ 184 KAAREKLKLLFIACGTNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFN-----VWKPGLWNFLQ 245 (255)
T ss_dssp HHHHHHCSEEEEEEETTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHH-----HHHHHHHHHHH
T ss_pred HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHH-----HHHHHHHHHHH
T ss_conf 875415876158817998872599999999998899879999899986979-----99999999999
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.23 E-value=2.5e-08 Score=64.82 Aligned_cols=117 Identities=16% Similarity=0.094 Sum_probs=83.3
Q ss_pred CCEEEEEEEECCCCCEEEEECCCCC--CHHHHHH---HHHHHHCCCCEEEEECCCCCC-CCCCC-CCCCCHH-HHHHHHH
Q ss_conf 6958999980899995999858899--9677999---899985089799996899976-99999-9577899-9999999
Q 005554 414 NGYQIQYTVAGKEGPAILLVHGFGA--FLEHYRD---NIYDIADGGNRVWAITLLGFG-RSEKP-NIVYTEL-MWSELLR 485 (691)
Q Consensus 414 ~g~~i~y~~~g~~~p~VIliHG~~~--~~~~~~~---~~~~L~~~G~~Vi~~D~~G~G-~S~~~-~~~~s~~-~~a~di~ 485 (691)
.|.+|.+....+..|+|+++||.++ +...|.. +.+...+.++.|+.+|--+.+ .++.+ ......+ .+.++|.
T Consensus 14 ~~r~~~~~v~~~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~ 93 (267)
T d1r88a_ 14 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELP 93 (267)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHH
T ss_pred CCCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 79660499877999889982899999973266543379999720896999978998867764666530058899999999
Q ss_pred HHHHH-HC--CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 99989-27--96789999693699999999958644136899537998
Q 005554 486 DFTVE-VV--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 486 ~ll~~-l~--~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
.+++. .. .++..+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 94 ~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 94 DWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp HHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 999974588988649999751579999999868162109999478667
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=4.4e-11 Score=81.38 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=77.1
Q ss_pred CCC-EEEEECCCCCC---HHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHH--CCCCE
Q ss_conf 999-59998588999---67799989998508--9799996899976999999-5778999999999999892--79678
Q 005554 426 EGP-AILLVHGFGAF---LEHYRDNIYDIADG--GNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEV--VGEPV 496 (691)
Q Consensus 426 ~~p-~VIliHG~~~~---~~~~~~~~~~L~~~--G~~Vi~~D~~G~G~S~~~~-~~~s~~~~a~di~~ll~~l--~~~~v 496 (691)
+.| |||++||++++ ...|..+...+.+. |+.|+++++.....++... ....+.++++.+.+.++.. +.+++
T Consensus 3 ~~P~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v 82 (279)
T d1ei9a_ 3 PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp TSSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 99985899888997878867899999999977898099998727985522355066669999999999998531345553
Q ss_pred EEEEECHHHHHHHHHHHHCCC-CCCEEEEECCCCCC
Q ss_conf 999969369999999995864-41368995379988
Q 005554 497 HLIGNSIGGYFVAIVACLWPA-VVKSVVLINSAGNV 531 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~p~-~V~~lIli~~~~~~ 531 (691)
++|||||||.++..++.+++. .|..+|.++++-..
T Consensus 83 ~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 83 NAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred EEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 599974301999999997178875669998899987
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.12 E-value=1.5e-08 Score=66.13 Aligned_cols=117 Identities=14% Similarity=0.042 Sum_probs=80.6
Q ss_pred CCEEEEEEEE--CCCCCEEEEECCCCCC--HHHHHH---HHHHHHCCCCEEEEECCCCCCCCCCCCC---------CCCH
Q ss_conf 6958999980--8999959998588999--677999---8999850897999968999769999995---------7789
Q 005554 414 NGYQIQYTVA--GKEGPAILLVHGFGAF--LEHYRD---NIYDIADGGNRVWAITLLGFGRSEKPNI---------VYTE 477 (691)
Q Consensus 414 ~g~~i~y~~~--g~~~p~VIliHG~~~~--~~~~~~---~~~~L~~~G~~Vi~~D~~G~G~S~~~~~---------~~s~ 477 (691)
.|.++.+... +...|+|+++||.+++ ...|.. +...+.+.|+.++.++..+.+....... ....
T Consensus 19 ~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (288)
T d1sfra_ 19 MGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKW 98 (288)
T ss_dssp TTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBH
T ss_pred CCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 89477999868999960899848989887410355411199999867977987415788777654676545665653118
Q ss_pred H-HHHHHHHHHHHH-HCC--CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 9-999999999989-279--6789999693699999999958644136899537998
Q 005554 478 L-MWSELLRDFTVE-VVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 478 ~-~~a~di~~ll~~-l~~--~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
+ .+.+++...++. ... +++.+.|+||||..|+.++.++|+++.+++.+++...
T Consensus 99 ~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 99 ETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp HHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 999999869999984588977618999751779999999954161369999267546
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.05 E-value=2e-10 Score=77.37 Aligned_cols=108 Identities=10% Similarity=0.078 Sum_probs=68.7
Q ss_pred CCCCCEEEEECCCCCCHH--HHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH----HHHHCC--C
Q ss_conf 899995999858899967--7999899985-089799996899976999999577899999999999----989279--6
Q 005554 424 GKEGPAILLVHGFGAFLE--HYRDNIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF----TVEVVG--E 494 (691)
Q Consensus 424 g~~~p~VIliHG~~~~~~--~~~~~~~~L~-~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~l----l~~l~~--~ 494 (691)
.+.+|++|++|||.++.. .+..+...+. ..+++||++|+.......-...........+.+..+ ++..+. +
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 78897799957776888750689999999963894499986034567663899987999999999999999985399854
Q ss_pred CEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 78999969369999999995864413689953799888
Q 005554 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 495 ~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~ 532 (691)
+++|||||+||.+|-.++. +..++.+++.++|+....
T Consensus 147 ~vhlIGhSLGAhvAG~aG~-~~~~l~rItgLDPA~P~F 183 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGS-RTPGLGRITGLDPVEASF 183 (337)
T ss_dssp GEEEEEETHHHHHHHHHHH-TSTTCCEEEEESCCCTTT
T ss_pred HEEEEEECHHHHHHHHHHH-HHCCCCCEECCCCCCCCC
T ss_conf 6579863477766679987-503656320357876665
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.03 E-value=4.3e-10 Score=75.42 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=72.4
Q ss_pred CCCCEEEEECCCCCCH--HHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHC--CCC
Q ss_conf 9999599985889996--77999899985-08979999689997699999957789999999999998----927--967
Q 005554 425 KEGPAILLVHGFGAFL--EHYRDNIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV----EVV--GEP 495 (691)
Q Consensus 425 ~~~p~VIliHG~~~~~--~~~~~~~~~L~-~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~----~l~--~~~ 495 (691)
+.+|+++++|||.++. ..+..+...+. ..+++||++|+.......-...........+.+..+++ ..+ .++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 88966999576667887610799999999638935999812363265439999749999999999999999854997100
Q ss_pred EEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 8999969369999999995864413689953799888
Q 005554 496 VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (691)
Q Consensus 496 v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~~~ 532 (691)
+++||||+||.+|-.++...+.++.+++-++|+....
T Consensus 148 vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~F 184 (338)
T d1bu8a2 148 VHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCF 184 (338)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTT
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 6888534888888899876056546542444676755
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=8.1e-07 Score=55.75 Aligned_cols=125 Identities=12% Similarity=0.075 Sum_probs=83.0
Q ss_pred EEEEEEEE-CCEEEEEEEECCC-----CCEEEEECCCCCCHHHHHHHHHH----HHC-------------CCCEEEEECC
Q ss_conf 17999988-6958999980899-----99599985889996779998999----850-------------8979999689
Q 005554 406 YSTRIWRW-NGYQIQYTVAGKE-----GPAILLVHGFGAFLEHYRDNIYD----IAD-------------GGNRVWAITL 462 (691)
Q Consensus 406 ~~~~~~~~-~g~~i~y~~~g~~-----~p~VIliHG~~~~~~~~~~~~~~----L~~-------------~G~~Vi~~D~ 462 (691)
.-..++++ ++..|+|.-.... .|.++.+.|++|++..|..+.+. +.. +-.+++.+|.
T Consensus 21 ~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred CEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEECCCCCEECCCCCCHHCCCCEEEEEC
T ss_conf 20256405999659999997379988798899988989589898898716892774899720107863202267799953
Q ss_pred C-CCCCCCCCCC--CCCHHHHHHHHHHHH----HHH---CCCCEEEEEECHHHHHHHHHHHHC----CCCCCEEEEECCC
Q ss_conf 9-9769999995--778999999999999----892---796789999693699999999958----6441368995379
Q 005554 463 L-GFGRSEKPNI--VYTELMWSELLRDFT----VEV---VGEPVHLIGNSIGGYFVAIVACLW----PAVVKSVVLINSA 528 (691)
Q Consensus 463 ~-G~G~S~~~~~--~~s~~~~a~di~~ll----~~l---~~~~v~lvGhS~GG~ial~~A~~~----p~~V~~lIli~~~ 528 (691)
| |.|.|..... ..+..+.+.++..++ +.. ...+++|.|-|.||..+-.+|... .-.++++++.++.
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEECCCCC
T ss_conf 78755356788777778199999999999999996666428962786312101011899999973674011434727886
Q ss_pred CC
Q ss_conf 98
Q 005554 529 GN 530 (691)
Q Consensus 529 ~~ 530 (691)
..
T Consensus 181 ~d 182 (452)
T d1ivya_ 181 SS 182 (452)
T ss_dssp SB
T ss_pred CC
T ss_conf 67
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.88 E-value=1.8e-06 Score=53.70 Aligned_cols=125 Identities=15% Similarity=0.091 Sum_probs=84.9
Q ss_pred EEEEEEEC--CEEEEEEEECC-----CCCEEEEECCCCCCHHHHHHHHHH----------HHC------CCCEEEEEC-C
Q ss_conf 79999886--95899998089-----999599985889996779998999----------850------897999968-9
Q 005554 407 STRIWRWN--GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIYD----------IAD------GGNRVWAIT-L 462 (691)
Q Consensus 407 ~~~~~~~~--g~~i~y~~~g~-----~~p~VIliHG~~~~~~~~~~~~~~----------L~~------~G~~Vi~~D-~ 462 (691)
-..++.++ +..|+|.-... ..|.+|.+.|+++++..+..+.+. +.. +-.+++.+| .
T Consensus 17 ysGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~P 96 (421)
T d1wpxa1 17 YTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp EEEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCS
T ss_pred EEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 15446638988569999998478988898899988989688898898715894788998640288650245677998227
Q ss_pred CCCCCCCC-CCCCCCHHHHHHHHHHHHHHH---------CCCCEEEEEECHHHHHHHHHHHHC---C---CCCCEEEEEC
Q ss_conf 99769999-995778999999999999892---------796789999693699999999958---6---4413689953
Q 005554 463 LGFGRSEK-PNIVYTELMWSELLRDFTVEV---------VGEPVHLIGNSIGGYFVAIVACLW---P---AVVKSVVLIN 526 (691)
Q Consensus 463 ~G~G~S~~-~~~~~s~~~~a~di~~ll~~l---------~~~~v~lvGhS~GG~ial~~A~~~---p---~~V~~lIli~ 526 (691)
.|.|.|-. .....+....++++.+++... ...+++|.|-|.||..+-.+|... . -.++++++.+
T Consensus 97 vGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 97 VNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 88770014884534508999999999999999686650368873786402134455799999997568875303467437
Q ss_pred CCCCC
Q ss_conf 79988
Q 005554 527 SAGNV 531 (691)
Q Consensus 527 ~~~~~ 531 (691)
+....
T Consensus 177 g~~dp 181 (421)
T d1wpxa1 177 GLTDP 181 (421)
T ss_dssp CCCCH
T ss_pred CCCCC
T ss_conf 74453
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.82 E-value=6.1e-09 Score=68.49 Aligned_cols=98 Identities=21% Similarity=0.281 Sum_probs=73.3
Q ss_pred CCEEEEECCCCCC-------HHHHHH----HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC---
Q ss_conf 9959998588999-------677999----89998508979999689997699999957789999999999998927---
Q 005554 427 GPAILLVHGFGAF-------LEHYRD----NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--- 492 (691)
Q Consensus 427 ~p~VIliHG~~~~-------~~~~~~----~~~~L~~~G~~Vi~~D~~G~G~S~~~~~~~s~~~~a~di~~ll~~l~--- 492 (691)
+-||||+||+.+- -..|.. +.+.|...|++|++......+ +.++-++.+...++...
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~---------S~~~RA~eL~~~I~~~~~d~ 77 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS---------SNWDRACEAYAQLVGGTVDY 77 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB---------CHHHHHHHHHHHHHCEEEEC
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHH
T ss_conf 998898188666775446762146785364689998589789985169866---------78999999999986345453
Q ss_pred --------------------------CCCEEEEEECHHHHHHHHHHHHCCC-------------------------CCCE
Q ss_conf --------------------------9678999969369999999995864-------------------------4136
Q 005554 493 --------------------------GEPVHLIGNSIGGYFVAIVACLWPA-------------------------VVKS 521 (691)
Q Consensus 493 --------------------------~~~v~lvGhS~GG~ial~~A~~~p~-------------------------~V~~ 521 (691)
..|++||||||||..+-.++...|+ .|++
T Consensus 78 G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~S 157 (388)
T d1ku0a_ 78 GAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLS 157 (388)
T ss_dssp CHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 37677652302237567220003366786358604554587999999702356432222212344333223567750688
Q ss_pred EEEECCCCCCCC
Q ss_conf 899537998888
Q 005554 522 VVLINSAGNVIP 533 (691)
Q Consensus 522 lIli~~~~~~~~ 533 (691)
++.++++-...+
T Consensus 158 vTTIsTPH~GS~ 169 (388)
T d1ku0a_ 158 VTTIATPHDGTT 169 (388)
T ss_dssp EEEESCCTTCCG
T ss_pred EEECCCCCCCCC
T ss_conf 885057889863
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.80 E-value=8e-08 Score=61.79 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=67.1
Q ss_pred CEEEEEEEECC------CCCEEEEECCCCC--CHHHHHHHHHHHHCCC----CEEEEECCCCCCCC-CCCCCC-CCHHHH
Q ss_conf 95899998089------9995999858899--9677999899985089----79999689997699-999957-789999
Q 005554 415 GYQIQYTVAGK------EGPAILLVHGFGA--FLEHYRDNIYDIADGG----NRVWAITLLGFGRS-EKPNIV-YTELMW 480 (691)
Q Consensus 415 g~~i~y~~~g~------~~p~VIliHG~~~--~~~~~~~~~~~L~~~G----~~Vi~~D~~G~G~S-~~~~~~-~s~~~~ 480 (691)
|.++.+..+-+ +-|+|+++||.+. ....+ ..+..+...| +-++.++....+.- ...... -..+.+
T Consensus 26 g~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~-~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 104 (246)
T d3c8da2 26 KNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAV 104 (246)
T ss_dssp TEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCCEEEEECCCCHHCCCCHH-HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 9889999997999999977789996894600157489-999999996899746986113455543354457547799999
Q ss_pred HHHHHHHHHHHC-----CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 999999998927-----96789999693699999999958644136899537998
Q 005554 481 SELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (691)
Q Consensus 481 a~di~~ll~~l~-----~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~~ 530 (691)
.+++..+++... .+++.++|+||||..++.++.++|+++.+++.+++...
T Consensus 105 ~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~ 159 (246)
T d3c8da2 105 QQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 159 (246)
T ss_dssp HHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHCEEECCCCCCC
T ss_conf 9986168998635566845548974270457775202349865638971776334
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=1.6e-06 Score=53.96 Aligned_cols=104 Identities=15% Similarity=0.055 Sum_probs=68.5
Q ss_pred CCEEEEECCCCCCHHHHHH---HHHHHHCCCCEEEEECCCCC----------------CCCCCCC-------CCCCHH-H
Q ss_conf 9959998588999677999---89998508979999689997----------------6999999-------577899-9
Q 005554 427 GPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITLLGF----------------GRSEKPN-------IVYTEL-M 479 (691)
Q Consensus 427 ~p~VIliHG~~~~~~~~~~---~~~~L~~~G~~Vi~~D~~G~----------------G~S~~~~-------~~~s~~-~ 479 (691)
-|+|.++||.+++...|.. +.....+.+..|+..+.... +.+...+ .....+ .
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHH
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 78899817999987899874027789987187451377755333567764343444577752346655874465435899
Q ss_pred HHHHHHHHHHHH-CC---------CCEEEEEECHHHHHHHHHHHH--CCCCCCEEEEECCCCC
Q ss_conf 999999999892-79---------678999969369999999995--8644136899537998
Q 005554 480 WSELLRDFTVEV-VG---------EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (691)
Q Consensus 480 ~a~di~~ll~~l-~~---------~~v~lvGhS~GG~ial~~A~~--~p~~V~~lIli~~~~~ 530 (691)
+.+++..+++.. .. ....|.|+||||.-|+.+|.+ +|++..++..+++...
T Consensus 129 i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 999999999986886643455654451788644307999999987058873688860167678
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.72 E-value=3.4e-06 Score=51.96 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=70.0
Q ss_pred CCEEEEECCCCCCHHHHHHHHHH----HHC------------CCCEEEEECC-CCCCCCCCCC----------CCCCHHH
Q ss_conf 99599985889996779998999----850------------8979999689-9976999999----------5778999
Q 005554 427 GPAILLVHGFGAFLEHYRDNIYD----IAD------------GGNRVWAITL-LGFGRSEKPN----------IVYTELM 479 (691)
Q Consensus 427 ~p~VIliHG~~~~~~~~~~~~~~----L~~------------~G~~Vi~~D~-~G~G~S~~~~----------~~~s~~~ 479 (691)
.|.+|.+.|++|++..+..+.+. +.. +-.+++.+|. .|.|.|-... ...+.++
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~ 146 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLED 146 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 98899988988389898898716780877999443277750133778999678886703247887664566544587999
Q ss_pred HHHHHHHHHHH----H---CCCCEEEEEECHHHHHHHHHHHHC------------CCCCCEEEEECCCCC
Q ss_conf 99999999989----2---796789999693699999999958------------644136899537998
Q 005554 480 WSELLRDFTVE----V---VGEPVHLIGNSIGGYFVAIVACLW------------PAVVKSVVLINSAGN 530 (691)
Q Consensus 480 ~a~di~~ll~~----l---~~~~v~lvGhS~GG~ial~~A~~~------------p~~V~~lIli~~~~~ 530 (691)
.+.++..+++. . ...+++|.|-|.||..+-.+|... +-.++++.+.++...
T Consensus 147 ~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 147 VTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 9999999999999858100369757850443230379999999973401456777644020151477557
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.63 E-value=2.5e-06 Score=52.77 Aligned_cols=124 Identities=12% Similarity=-0.034 Sum_probs=72.9
Q ss_pred CCCEEEEEEEECCEEEEEEEECCC-------CCEEEEECCCCCCHHHH-------HHHHHHH----HCCCCEEEEECCCC
Q ss_conf 994179999886958999980899-------99599985889996779-------9989998----50897999968999
Q 005554 403 EGVYSTRIWRWNGYQIQYTVAGKE-------GPAILLVHGFGAFLEHY-------RDNIYDI----ADGGNRVWAITLLG 464 (691)
Q Consensus 403 ~~~~~~~~~~~~g~~i~y~~~g~~-------~p~VIliHG~~~~~~~~-------~~~~~~L----~~~G~~Vi~~D~~G 464 (691)
.|.++...++..+.+..+..+-++ -|.|+++||.+++...| ..+...+ ....+.++.++..+
T Consensus 24 ~g~v~~~~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 103 (273)
T d1wb4a1 24 AGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 103 (273)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCS
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 97599999946897689999969998989985089998589998210455334066788766543026872453333578
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH---------------HCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 76999999577899999999999989---------------279678999969369999999995864413689953799
Q 005554 465 FGRSEKPNIVYTELMWSELLRDFTVE---------------VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (691)
Q Consensus 465 ~G~S~~~~~~~s~~~~a~di~~ll~~---------------l~~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~~ 529 (691)
.+.... .+ .....+.+...++. ...+++.+.|+||||..++.+|.++|+++.+++.+++..
T Consensus 104 ~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 104 GNCTAQ---NF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp TTCCTT---TH-HHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred CCCCCC---CC-HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 887664---10-00022234641444322113366652246784445997257763566654511878254999937644
Q ss_pred C
Q ss_conf 8
Q 005554 530 N 530 (691)
Q Consensus 530 ~ 530 (691)
.
T Consensus 180 ~ 180 (273)
T d1wb4a1 180 W 180 (273)
T ss_dssp C
T ss_pred C
T ss_conf 6
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.27 E-value=5.9e-06 Score=50.54 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=65.0
Q ss_pred CCEEEEEECHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 678999969369999999995864413-6899537998888413332113421288145666889999996599999864
Q 005554 494 EPVHLIGNSIGGYFVAIVACLWPAVVK-SVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFYLRLNISNFVKQC 572 (691)
Q Consensus 494 ~~v~lvGhS~GG~ial~~A~~~p~~V~-~lIli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (691)
.++.+.|+|+||.+++.++..+|+.++ ++..+++.......... ... ..
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~~--~~~----------------------------~~ 60 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY--YTS----------------------------CM 60 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC--GGG----------------------------GS
T ss_pred CCEEEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCC--HHH----------------------------HH
T ss_conf 606999879999999999986664434567896257366544430--588----------------------------85
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC---C
Q ss_conf 6898740019999999983279316999999850136761676514899858999738999999267999999827---9
Q 005554 573 YPTRRERADDWLISEMLRASYDPGVLVVLESIFSFKLSLPLNYLLEGFKEKVLIIQGIKDPISDSKSKVAMFKEHC---A 649 (691)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~~~~~~---~ 649 (691)
.............. .......... .......|+++++|.+|..|++....++.+.+. +
T Consensus 61 ~~~~~~~~~~~~~~----------------~~~~~~~i~~---~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~ 121 (318)
T d2d81a1 61 YNGYPSITTPTANM----------------KSWSGNQIAS---VANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDN 121 (318)
T ss_dssp TTCCCCCHHHHHHH----------------HHHBTTTBCC---GGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSC
T ss_pred HCCCCCCCCHHHHH----------------HHHHHCCCCC---HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 16888876766789----------------9876448763---1004799889995699997498999999999972767
Q ss_pred --CCEEEEE-CCCCCCCCC
Q ss_conf --8299992-977898855
Q 005554 650 --GIVIREL-DAGHCPHDE 665 (691)
Q Consensus 650 --~~~~~~~-~agH~~~~e 665 (691)
+.+++.. ++||-....
T Consensus 122 ~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 122 SANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGGEEEEEETTCCSSEEES
T ss_pred CCCEEEEEECCCCCCCCCC
T ss_conf 8855999818978788888
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=0.00037 Score=39.75 Aligned_cols=100 Identities=11% Similarity=-0.002 Sum_probs=53.8
Q ss_pred CEEEEECCCCCCHHHHHHHH-HHHHCCCCEEEEECCCCCCCCCC---------------CC--------CCCCHHHHHH-
Q ss_conf 95999858899967799989-99850897999968999769999---------------99--------5778999999-
Q 005554 428 PAILLVHGFGAFLEHYRDNI-YDIADGGNRVWAITLLGFGRSEK---------------PN--------IVYTELMWSE- 482 (691)
Q Consensus 428 p~VIliHG~~~~~~~~~~~~-~~L~~~G~~Vi~~D~~G~G~S~~---------------~~--------~~~s~~~~a~- 482 (691)
|+|+++||.+........+. ......++-|+.++.++...-.. .. ..-....+.+
T Consensus 44 Pvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 123 (265)
T d2gzsa1 44 PILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQL 123 (265)
T ss_dssp EEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHH
T ss_conf 59999659123436899999998714788599846888776765433323455667665543334011035636778888
Q ss_pred ---HHHHHHHHH-C--CCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf ---999999892-7--967899996936999999999586441368995379
Q 005554 483 ---LLRDFTVEV-V--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (691)
Q Consensus 483 ---di~~ll~~l-~--~~~v~lvGhS~GG~ial~~A~~~p~~V~~lIli~~~ 528 (691)
.+...++.. . .....++|+|+||..++.++.. ++.+.+++.+++.
T Consensus 124 ~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 124 LETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp HHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHC-CCCCCEEEEECCC
T ss_conf 99999999998568884765998335889999999972-8666889998784
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.63 E-value=0.00016 Score=42.00 Aligned_cols=107 Identities=18% Similarity=0.156 Sum_probs=67.8
Q ss_pred CCCEEEEECCCCC---CHHHHH-HHHHHHHCCCCEEEEECCC----CCCCCC----CCCCCCCHHHHHHHHHHH---HHH
Q ss_conf 9995999858899---967799-9899985089799996899----976999----999577899999999999---989
Q 005554 426 EGPAILLVHGFGA---FLEHYR-DNIYDIADGGNRVWAITLL----GFGRSE----KPNIVYTELMWSELLRDF---TVE 490 (691)
Q Consensus 426 ~~p~VIliHG~~~---~~~~~~-~~~~~L~~~G~~Vi~~D~~----G~G~S~----~~~~~~s~~~~a~di~~l---l~~ 490 (691)
..|++|+|||.+. +...+. .....+.+.+.-||++++| |+-... ...+.+.+.|+...+.-+ |..
T Consensus 95 ~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 174 (483)
T d1qe3a_ 95 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISA 174 (483)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99568998304333577553445421213567558985214304133156332221235511447899999999987997
Q ss_pred HCC--CCEEEEEECHHHHHHHHHHHHC--CCCCCEEEEECCCCCCC
Q ss_conf 279--6789999693699999999958--64413689953799888
Q 005554 491 VVG--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAGNVI 532 (691)
Q Consensus 491 l~~--~~v~lvGhS~GG~ial~~A~~~--p~~V~~lIli~~~~~~~ 532 (691)
.|+ ++|.|+|+|-||..+....... ...+.++|+.++.....
T Consensus 175 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~~ 220 (483)
T d1qe3a_ 175 FGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTM 220 (483)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCB
T ss_pred CCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCC
T ss_conf 3998443411001455111556534665677530411346875555
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.51 E-value=0.00033 Score=40.07 Aligned_cols=105 Identities=15% Similarity=0.065 Sum_probs=66.5
Q ss_pred CCCEEEEECCCCC----CHHHHHHHHHHHHCCCCEEEEECCC----CCCCCC---CCCCCCCHHHHHHHHHHH---HHHH
Q ss_conf 9995999858899----9677999899985089799996899----976999---999577899999999999---9892
Q 005554 426 EGPAILLVHGFGA----FLEHYRDNIYDIADGGNRVWAITLL----GFGRSE---KPNIVYTELMWSELLRDF---TVEV 491 (691)
Q Consensus 426 ~~p~VIliHG~~~----~~~~~~~~~~~L~~~G~~Vi~~D~~----G~G~S~---~~~~~~s~~~~a~di~~l---l~~l 491 (691)
..|++|+|||.+. +..........+.+.+.-||++++| |+-.+. ...+.+.+.|+...|.-+ |...
T Consensus 105 ~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 184 (532)
T d1ea5a_ 105 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFF 184 (532)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88679999858742445874556750122036840798752346653433121247787555130899999999999862
Q ss_pred CC--CCEEEEEECHHHHHHHHHHHHC--CCCCCEEEEECCCCC
Q ss_conf 79--6789999693699999999958--644136899537998
Q 005554 492 VG--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAGN 530 (691)
Q Consensus 492 ~~--~~v~lvGhS~GG~ial~~A~~~--p~~V~~lIli~~~~~ 530 (691)
|+ .+|.|+|+|-||..+....... ...+.++|+.++...
T Consensus 185 GGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 185 GGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHEEECCCCC
T ss_conf 6773235763202565513332157631023311201023356
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.46 E-value=0.00048 Score=39.05 Aligned_cols=104 Identities=18% Similarity=0.115 Sum_probs=66.1
Q ss_pred CCEEEEECCCCC---CH-HHHHHHHHHHHCCCCEEEEECCC----CCCCCC---CCCCCCCHHHHHHHHHHH---HHHHC
Q ss_conf 995999858899---96-77999899985089799996899----976999---999577899999999999---98927
Q 005554 427 GPAILLVHGFGA---FL-EHYRDNIYDIADGGNRVWAITLL----GFGRSE---KPNIVYTELMWSELLRDF---TVEVV 492 (691)
Q Consensus 427 ~p~VIliHG~~~---~~-~~~~~~~~~L~~~G~~Vi~~D~~----G~G~S~---~~~~~~s~~~~a~di~~l---l~~l~ 492 (691)
-|++|+|||.+. +. ..+..-.....+.+.-||++++| |+-.+. ...+.+.+.|+...|.-+ |...|
T Consensus 112 lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 191 (542)
T d2ha2a1 112 TPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFG 191 (542)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 86899998776324567644557313333113115755550111144203444557776776358999999999998740
Q ss_pred C--CCEEEEEECHHHHHHHHHHHHC--CCCCCEEEEECCCCC
Q ss_conf 9--6789999693699999999958--644136899537998
Q 005554 493 G--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAGN 530 (691)
Q Consensus 493 ~--~~v~lvGhS~GG~ial~~A~~~--p~~V~~lIli~~~~~ 530 (691)
+ ++|.|+|+|-||..+....... ...+.++|+.++...
T Consensus 192 GDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 192 GDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCC
T ss_conf 684001101114544300334432211677532302034667
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=0.00027 Score=40.55 Aligned_cols=103 Identities=19% Similarity=0.190 Sum_probs=66.7
Q ss_pred CCEEEEECCCCC---CHHHHHHHHHHHHCCCCEEEEECCC----CCCCCCC--CCCCCCHHHHHHHHHHH---HHHHCC-
Q ss_conf 995999858899---9677999899985089799996899----9769999--99577899999999999---989279-
Q 005554 427 GPAILLVHGFGA---FLEHYRDNIYDIADGGNRVWAITLL----GFGRSEK--PNIVYTELMWSELLRDF---TVEVVG- 493 (691)
Q Consensus 427 ~p~VIliHG~~~---~~~~~~~~~~~L~~~G~~Vi~~D~~----G~G~S~~--~~~~~s~~~~a~di~~l---l~~l~~- 493 (691)
-|++|+|||.+. +...+. -...++.++.-||++++| |+-.+.. ..+.+.+.|+...|.-+ |...|+
T Consensus 113 lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGD 191 (532)
T d2h7ca1 113 LPVMVWIHGGGLMVGAASTYD-GLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGN 191 (532)
T ss_dssp EEEEEEECCSTTTSCCSTTSC-CHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred CEEEEEEECCCCCCCCCCCCC-CHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 279999858865313566678-5234204753899984346777654333345433236388999999999999983689
Q ss_pred -CCEEEEEECHHHHHHHHHHHH--CCCCCCEEEEECCCCC
Q ss_conf -678999969369999999995--8644136899537998
Q 005554 494 -EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (691)
Q Consensus 494 -~~v~lvGhS~GG~ial~~A~~--~p~~V~~lIli~~~~~ 530 (691)
++|.|+|+|-||..+...... ....+.++|+.++...
T Consensus 192 p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 192 PGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp EEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCC
T ss_conf 5205640236542159999853103683111122035655
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.44 E-value=0.00068 Score=38.17 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=65.2
Q ss_pred CCEEEEECCCCCC---HHHH--HHH-HHHH-HCCCCEEEEECCC----CCCCCCC----CCCCCCHHHHHHHHHHH---H
Q ss_conf 9959998588999---6779--998-9998-5089799996899----9769999----99577899999999999---9
Q 005554 427 GPAILLVHGFGAF---LEHY--RDN-IYDI-ADGGNRVWAITLL----GFGRSEK----PNIVYTELMWSELLRDF---T 488 (691)
Q Consensus 427 ~p~VIliHG~~~~---~~~~--~~~-~~~L-~~~G~~Vi~~D~~----G~G~S~~----~~~~~s~~~~a~di~~l---l 488 (691)
.|++|+|||.+.. ...+ ..+ ...+ ...+.-||++++| |+-.+.. ...++.+.|+...|.-+ |
T Consensus 122 lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 201 (544)
T d1thga_ 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNI 201 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHG
T ss_pred CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88799952688765777667862012356651698599932565136656688313201333377777664444332222
Q ss_pred HHHCC--CCEEEEEECHHHHHHHHHHHHC--------CCCCCEEEEECCCCC
Q ss_conf 89279--6789999693699999999958--------644136899537998
Q 005554 489 VEVVG--EPVHLIGNSIGGYFVAIVACLW--------PAVVKSVVLINSAGN 530 (691)
Q Consensus 489 ~~l~~--~~v~lvGhS~GG~ial~~A~~~--------p~~V~~lIli~~~~~ 530 (691)
...|+ ++|.|+|+|-||..+....... ...+.++|+.++...
T Consensus 202 ~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 202 ANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCC
T ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf 0245677841763423516778999838677765310211102210246556
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00077 Score=37.83 Aligned_cols=106 Identities=16% Similarity=0.083 Sum_probs=65.1
Q ss_pred CCCEEEEECCCCC---CHH-HHHHHHHHHHCCCCEEEEECCC----CCCCC-C--CCCCCCCHHHHHHHHHHH---HHHH
Q ss_conf 9995999858899---967-7999899985089799996899----97699-9--999577899999999999---9892
Q 005554 426 EGPAILLVHGFGA---FLE-HYRDNIYDIADGGNRVWAITLL----GFGRS-E--KPNIVYTELMWSELLRDF---TVEV 491 (691)
Q Consensus 426 ~~p~VIliHG~~~---~~~-~~~~~~~~L~~~G~~Vi~~D~~----G~G~S-~--~~~~~~s~~~~a~di~~l---l~~l 491 (691)
..|++|+|||.+. +.. ..........+.+.-||.+++| |+-.+ . ...+.+.+.|+...|.-+ |+..
T Consensus 103 ~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 182 (526)
T d1p0ia_ 103 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAF 182 (526)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88449999779842246764456863221246603773244446544467887655653234311235546389778876
Q ss_pred CC--CCEEEEEECHHHHHHHHHHHH--CCCCCCEEEEECCCCCC
Q ss_conf 79--678999969369999999995--86441368995379988
Q 005554 492 VG--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGNV 531 (691)
Q Consensus 492 ~~--~~v~lvGhS~GG~ial~~A~~--~p~~V~~lIli~~~~~~ 531 (691)
|+ .+|.|+|+|-||..+...... ....+.++|+.++....
T Consensus 183 GGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~~ 226 (526)
T d1p0ia_ 183 GGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNA 226 (526)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTTS
T ss_pred HCCCHHEEEHHHCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 40721122201135563444022478620232112002345558
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.36 E-value=0.00072 Score=37.99 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=63.6
Q ss_pred CCCEEEEECCCCC---CHHHH--HHHH--HHHHCCCCEEEEECCC----CCCCCC----CCCCCCCHHHHHHHHHHH---
Q ss_conf 9995999858899---96779--9989--9985089799996899----976999----999577899999999999---
Q 005554 426 EGPAILLVHGFGA---FLEHY--RDNI--YDIADGGNRVWAITLL----GFGRSE----KPNIVYTELMWSELLRDF--- 487 (691)
Q Consensus 426 ~~p~VIliHG~~~---~~~~~--~~~~--~~L~~~G~~Vi~~D~~----G~G~S~----~~~~~~s~~~~a~di~~l--- 487 (691)
+.|++|+|||.+. +...| ..++ ..+..++.-||++++| |+-... ...+.+.+.|+...|.-+
T Consensus 113 ~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 192 (534)
T d1llfa_ 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCHHCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97599997788655688877883101342243158868998644887642467753234456422216778899988765
Q ss_pred HHHHCC--CCEEEEEECHHHHHHHHHHHH-C----C---CCCCEEEEECCCC
Q ss_conf 989279--678999969369999999995-8----6---4413689953799
Q 005554 488 TVEVVG--EPVHLIGNSIGGYFVAIVACL-W----P---AVVKSVVLINSAG 529 (691)
Q Consensus 488 l~~l~~--~~v~lvGhS~GG~ial~~A~~-~----p---~~V~~lIli~~~~ 529 (691)
|...|+ ++|.|+|+|-||..+...... . | ..+.++|+.++..
T Consensus 193 I~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 5431158762241566604889999983244554310003332555356764
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.08 E-value=0.0011 Score=36.99 Aligned_cols=104 Identities=20% Similarity=0.112 Sum_probs=62.4
Q ss_pred CCEEEEECCCCC---CHHHHHHHHH-HHHCCCCEEEEECCC----CCCCCCC----CCCCCCHHHHHHHHHHH---HHHH
Q ss_conf 995999858899---9677999899-985089799996899----9769999----99577899999999999---9892
Q 005554 427 GPAILLVHGFGA---FLEHYRDNIY-DIADGGNRVWAITLL----GFGRSEK----PNIVYTELMWSELLRDF---TVEV 491 (691)
Q Consensus 427 ~p~VIliHG~~~---~~~~~~~~~~-~L~~~G~~Vi~~D~~----G~G~S~~----~~~~~s~~~~a~di~~l---l~~l 491 (691)
.|++|+|||++. +...+..-.. ...+.+.-||.+++| |+-.+.. ....+.+.|+...+.-+ |...
T Consensus 97 ~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~F 176 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQF 176 (517)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGG
T ss_pred CEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 51899976775666887545632566542256526988842464120476100013432200899999999998777764
Q ss_pred CC--CCEEEEEECHHHHHHHHHHHH----CCCCCCEEEEECCCCC
Q ss_conf 79--678999969369999999995----8644136899537998
Q 005554 492 VG--EPVHLIGNSIGGYFVAIVACL----WPAVVKSVVLINSAGN 530 (691)
Q Consensus 492 ~~--~~v~lvGhS~GG~ial~~A~~----~p~~V~~lIli~~~~~ 530 (691)
|+ ++|.|+|+|-||..+...... ....+.++|+.++...
T Consensus 177 GGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 177 GGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
T ss_conf 389442302424652566899873221246665511022255301
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.04 E-value=0.0016 Score=35.94 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=63.5
Q ss_pred CCEEEEECCCCC---CHHH--HH----HHHHHHH-CCCCEEEEECCC----CCCCCC--CCCCCCCHHHHHHHHHHH---
Q ss_conf 995999858899---9677--99----9899985-089799996899----976999--999577899999999999---
Q 005554 427 GPAILLVHGFGA---FLEH--YR----DNIYDIA-DGGNRVWAITLL----GFGRSE--KPNIVYTELMWSELLRDF--- 487 (691)
Q Consensus 427 ~p~VIliHG~~~---~~~~--~~----~~~~~L~-~~G~~Vi~~D~~----G~G~S~--~~~~~~s~~~~a~di~~l--- 487 (691)
-|++|+|||.+- +... +. .-...|+ ..+.-||.+++| |+-.+. ...+.+.+.|+...|.-+
T Consensus 98 lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~n 177 (579)
T d2bcea_ 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN 177 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 83899977886567788876667754456366640398799964311144423233345777530136777777777643
Q ss_pred HHHHCC--CCEEEEEECHHHHHHHHHHHH--CCCCCCEEEEECCCCC
Q ss_conf 989279--678999969369999999995--8644136899537998
Q 005554 488 TVEVVG--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (691)
Q Consensus 488 l~~l~~--~~v~lvGhS~GG~ial~~A~~--~p~~V~~lIli~~~~~ 530 (691)
|...|+ ++|.|+|+|-||..+...... ....+.++|+.++...
T Consensus 178 I~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 178 IEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEECCCCCC
T ss_conf 44302676742754046654024566655403675434411157756
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.90 E-value=0.0023 Score=34.99 Aligned_cols=105 Identities=20% Similarity=0.046 Sum_probs=63.8
Q ss_pred CCCEEEEECCCCC---CHHHHHHHHHHHH-CCCCEEEEECCC----CCCCC---------CCCCCCCCHHHHHHHHHHH-
Q ss_conf 9995999858899---9677999899985-089799996899----97699---------9999577899999999999-
Q 005554 426 EGPAILLVHGFGA---FLEHYRDNIYDIA-DGGNRVWAITLL----GFGRS---------EKPNIVYTELMWSELLRDF- 487 (691)
Q Consensus 426 ~~p~VIliHG~~~---~~~~~~~~~~~L~-~~G~~Vi~~D~~----G~G~S---------~~~~~~~s~~~~a~di~~l- 487 (691)
..|++|+|||.+. +......-...|+ +.+.-||++++| |+-.. ....+++.+.|+...|.-+
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 217 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 217 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97089998189766788764455433565338706874020651533344432346454567887454067777998898
Q ss_pred --HHHHCC--CCEEEEEECHHHHHHHHHHHHC--CCCCCEEEEECCCCC
Q ss_conf --989279--6789999693699999999958--644136899537998
Q 005554 488 --TVEVVG--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAGN 530 (691)
Q Consensus 488 --l~~l~~--~~v~lvGhS~GG~ial~~A~~~--p~~V~~lIli~~~~~ 530 (691)
|...|+ ++|.|+|+|-||..+....... ...+.++|+.++...
T Consensus 218 ~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 218 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCC
T ss_conf 7645522698823712456764213220114655552111200024445
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.59 E-value=0.026 Score=28.67 Aligned_cols=46 Identities=15% Similarity=0.267 Sum_probs=28.6
Q ss_pred HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCC---CCCCEEEEECCC
Q ss_conf 99999998927967899996936999999999586---441368995379
Q 005554 482 ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSA 528 (691)
Q Consensus 482 ~di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p---~~V~~lIli~~~ 528 (691)
+.+..+++.....++++.|||+||.+|..++.... ..+. ++..+++
T Consensus 113 ~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~~-~~tFG~P 161 (261)
T d1uwca_ 113 SLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCC-EEEECCC
T ss_conf 999998854898516884244367999999999985189864-6995575
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=95.53 E-value=0.015 Score=30.12 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=23.4
Q ss_pred HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 99999989279678999969369999999995
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (691)
Q Consensus 483 di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~ 514 (691)
.+...++.....++++.|||+||.+|..++..
T Consensus 121 ~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 121 TVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 99999976899469984254107899999999
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.53 E-value=0.015 Score=30.13 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=28.0
Q ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHHH----CCC---CCCEEEEECCC
Q ss_conf 9999989279678999969369999999995----864---41368995379
Q 005554 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACL----WPA---VVKSVVLINSA 528 (691)
Q Consensus 484 i~~ll~~l~~~~v~lvGhS~GG~ial~~A~~----~p~---~V~~lIli~~~ 528 (691)
+..+++.....++++.|||+||.+|..+|.. .|. ..-.++..+++
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~tFG~P 174 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGP 174 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTEEEEEESCC
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 9998865899459997145106999999999997373447776239985476
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.47 E-value=0.038 Score=27.68 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=28.4
Q ss_pred HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCC---CCCCEEEEECCC
Q ss_conf 9999998927967899996936999999999586---441368995379
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSA 528 (691)
Q Consensus 483 di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p---~~V~~lIli~~~ 528 (691)
.+...++.....++++.|||+||.+|..++.... ..+. ++..+++
T Consensus 127 ~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~~~~~~i~-~~tFG~P 174 (269)
T d1tiba_ 127 KVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDID-VFSYGAP 174 (269)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEE-EEEESCC
T ss_pred HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCE-EEEECCC
T ss_conf 88999976888525661245278999999999873467630-7981598
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.32 E-value=0.014 Score=30.32 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=28.0
Q ss_pred HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCC---CCCCEEEEECCC
Q ss_conf 9999998927967899996936999999999586---441368995379
Q 005554 483 LLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSA 528 (691)
Q Consensus 483 di~~ll~~l~~~~v~lvGhS~GG~ial~~A~~~p---~~V~~lIli~~~ 528 (691)
.+..++......++++.|||+||.+|..++.... .....++..+++
T Consensus 126 ~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l~~~~~~~~~~~tfG~P 174 (271)
T d1tiaa_ 126 ELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASP 174 (271)
T ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 9999997689936998525268999999999998728986307983799
|
| >d1dnpa1 a.99.1.1 (A:201-469) C-terminal domain of DNA photolyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Escherichia coli [TaxId: 562]
Probab=90.57 E-value=0.012 Score=30.75 Aligned_cols=55 Identities=9% Similarity=0.010 Sum_probs=36.4
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHH
Q ss_conf 420365034666775320455556678899963235786100168872305716889999999
Q 005554 242 LINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAY 304 (691)
Q Consensus 242 ~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~f 304 (691)
|+||.+|+.+|+.|++ .++.+|...||.|... .++.+|+...-|.-..++.+...
T Consensus 1 P~Ge~aAl~~L~~Fl~-~~l~~Y~~~Rn~p~~~-------~tSrLSPyL~~G~ISprev~~~v 55 (269)
T d1dnpa1 1 PVEEKAAIAQLRQFCQ-NGAGEYEQQRDFPAVE-------GTSRLSASLATGGLSPRQCLHRL 55 (269)
T ss_dssp CCSHHHHHHHHHHHHH-THHHHHHHHTTCTTSC-------CSCCCHHHHHHTSSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCC-------CCCCCCHHHCCCCCCHHHHHHHH
T ss_conf 9889999999999998-5888876753898988-------98067687768858899999999
|
| >d1u3da1 a.99.1.1 (A:198-497) Cryptochrome C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: Cryptochrome C-terminal domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.26 E-value=0.038 Score=27.63 Aligned_cols=58 Identities=9% Similarity=-0.002 Sum_probs=38.5
Q ss_pred HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHH
Q ss_conf 0233420365034666775320455556678899963235786100168872305716889999999
Q 005554 238 ESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAY 304 (691)
Q Consensus 238 ~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~f 304 (691)
..| .+||.+|+.+|+.|++ .++.+|...||.|... .++.+|++..-|.-..++.++..
T Consensus 14 ~~W-~pGe~~A~~~L~~Fl~-~~l~~Y~~~Rn~p~~~-------~tSrLSPyL~~G~IS~ReV~~~v 71 (300)
T d1u3da1 14 RAW-SPGWSNGDKALTTFIN-GPLLEYSKNRRKADSA-------TTSFLSPHLHFGEVSVRKVFHLV 71 (300)
T ss_dssp HHC-CCSHHHHHHHHHHHHT-TGGGGTTTTTTCSSST-------TSCCCHHHHHTTSSCHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCC-------CCCCCCHHHCCCCCCHHHHHHHH
T ss_conf 768-8669999999999998-0377775634898866-------87514687828988799999999
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=88.73 E-value=0.47 Score=21.11 Aligned_cols=100 Identities=10% Similarity=-0.029 Sum_probs=57.0
Q ss_pred EEEEECCCCCCH------HHHH-HHHHHHHCCCCEEEEECCCCCCCCCC---C--CCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 599985889996------7799-98999850897999968999769999---9--9577899999999999989279678
Q 005554 429 AILLVHGFGAFL------EHYR-DNIYDIADGGNRVWAITLLGFGRSEK---P--NIVYTELMWSELLRDFTVEVVGEPV 496 (691)
Q Consensus 429 ~VIliHG~~~~~------~~~~-~~~~~L~~~G~~Vi~~D~~G~G~S~~---~--~~~~s~~~~a~di~~ll~~l~~~~v 496 (691)
.||+.-|.+... ..+. .+...+...+..+..++++-...... . ...-....+...+.+....-...++
T Consensus 19 ~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tki 98 (197)
T d1cexa_ 19 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99995488899898744389999999750898515763155431365556563331147789999999999960999749
Q ss_pred EEEEECHHHHHHHHHHHHCC----CCCCEEEEECCC
Q ss_conf 99996936999999999586----441368995379
Q 005554 497 HLIGNSIGGYFVAIVACLWP----AVVKSVVLINSA 528 (691)
Q Consensus 497 ~lvGhS~GG~ial~~A~~~p----~~V~~lIli~~~ 528 (691)
+|+|+|.|+.++-..+...+ ++|.++++++-+
T Consensus 99 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 99 IAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred EEEEECCCCHHHHCCCCCCCHHHHHHEEEEEEEECC
T ss_conf 986405530766034335883333317889998178
|
| >d1owla1 a.99.1.1 (A:205-475) C-terminal domain of DNA photolyase {Synechococcus elongatus [TaxId: 32046]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Synechococcus elongatus [TaxId: 32046]
Probab=87.44 E-value=0.047 Score=27.11 Aligned_cols=54 Identities=13% Similarity=-0.050 Sum_probs=36.0
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHH
Q ss_conf 42036503466677532045555667889996323578610016887230571688999999
Q 005554 242 LINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQA 303 (691)
Q Consensus 242 ~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~ 303 (691)
.+||.+|+.+|+.|++ ..+.+|...||.|... .++.+|+...-|.-..++.++.
T Consensus 3 ~pGE~~Al~~L~~Fl~-~~l~~Y~~~Rn~p~~~-------~tS~LSPyL~fG~IS~R~v~~~ 56 (271)
T d1owla1 3 EPGETAAIARLQEFCD-RAIADYDPQRNFPAEA-------GTSGLSPALKFGAIGIRQAWQA 56 (271)
T ss_dssp CSSHHHHHHHHHHHHH-TGGGGHHHHTTCTTSC-------CSCCCHHHHHTTSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HHHHHHCCCCCCCCCC-------CCCCCCHHHCCCCCCHHHHHHH
T ss_conf 8139999999999998-7877632003898877-------8714788884580679999999
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=85.81 E-value=0.69 Score=20.09 Aligned_cols=100 Identities=15% Similarity=0.205 Sum_probs=53.6
Q ss_pred EEEEECCCCCCH--HHHHHHHHHHHC--CCCEEEEECCCCCCCCCC-CCCCC--CHH----HHHHHHHHHHHHHCCCCEE
Q ss_conf 599985889996--779998999850--897999968999769999-99577--899----9999999999892796789
Q 005554 429 AILLVHGFGAFL--EHYRDNIYDIAD--GGNRVWAITLLGFGRSEK-PNIVY--TEL----MWSELLRDFTVEVVGEPVH 497 (691)
Q Consensus 429 ~VIliHG~~~~~--~~~~~~~~~L~~--~G~~Vi~~D~~G~G~S~~-~~~~~--s~~----~~a~di~~ll~~l~~~~v~ 497 (691)
.||+..|.+.+. ..-..+...+.+ .+-.+..+++|....... ....| +.. ...+.|.+..++-...+++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~v 85 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 99996788899998754899999998648980387132663565444566664309999999999999999759997189
Q ss_pred EEEECHHHHHHHHHHHHC------------------CCCCCEEEEECCC
Q ss_conf 999693699999999958------------------6441368995379
Q 005554 498 LIGNSIGGYFVAIVACLW------------------PAVVKSVVLINSA 528 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~------------------p~~V~~lIli~~~ 528 (691)
|+|+|.|+.++-.++... .++|.++++++-+
T Consensus 86 l~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP 134 (207)
T d1g66a_ 86 LVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCEEEEEEECCC
T ss_conf 8862354488887875167754433456667880022100058874687
|
| >d2j07a1 a.99.1.1 (A:172-405) C-terminal domain of DNA photolyase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cryptochrome/photolyase FAD-binding domain superfamily: Cryptochrome/photolyase FAD-binding domain family: Cryptochrome/photolyase FAD-binding domain domain: C-terminal domain of DNA photolyase species: Thermus thermophilus [TaxId: 274]
Probab=85.27 E-value=0.059 Score=26.51 Aligned_cols=57 Identities=12% Similarity=-0.117 Sum_probs=37.7
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 42036503466677532045555667889996323578610016887230571688999999998422789881699999
Q 005554 242 LINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQE 321 (691)
Q Consensus 242 ~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~a~~~l~~fl~~~~~~~~~~Y~~~r~ 321 (691)
++||.+|+.+|+.|++ .++.+|...||.+... .+ .+|+.||.|+..+...-|.+..+
T Consensus 5 ~pGe~~Al~~L~~Fl~-~~l~~Y~~~Rn~p~~~-------~t---------------S~LSPyL~~G~LS~r~v~~~~~~ 61 (234)
T d2j07a1 5 EPGEEAALAGLRAFLE-AKLPRYAEERDRLDGE-------GG---------------SRLSPYFALGVLSPRLAAWEAER 61 (234)
T ss_dssp CCSHHHHHHHHHHHHH-HTGGGHHHHTTCTTCT-------TS---------------CCCHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCC-------CC---------------CCCCHHHCCCCCCHHHHHHHHHH
T ss_conf 8449999999999999-7877876756888887-------87---------------54689880687859999999864
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=85.26 E-value=0.73 Score=19.93 Aligned_cols=100 Identities=14% Similarity=0.139 Sum_probs=54.2
Q ss_pred EEEEECCCCCCH--HHHHHHHHHHHC--CCCEEEEECCCCCCCCCCC-CCCC--C----HHHHHHHHHHHHHHHCCCCEE
Q ss_conf 599985889996--779998999850--8979999689997699999-9577--8----999999999999892796789
Q 005554 429 AILLVHGFGAFL--EHYRDNIYDIAD--GGNRVWAITLLGFGRSEKP-NIVY--T----ELMWSELLRDFTVEVVGEPVH 497 (691)
Q Consensus 429 ~VIliHG~~~~~--~~~~~~~~~L~~--~G~~Vi~~D~~G~G~S~~~-~~~~--s----~~~~a~di~~ll~~l~~~~v~ 497 (691)
.||+..|.+... .....++..+.+ .|-.+..+++|........ ...| | ...+.+.+.....+-...+++
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99995578899888754387999997379975899664366655454666511469999999999999999769998189
Q ss_pred EEEECHHHHHHHHHHHHC------------------CCCCCEEEEECCC
Q ss_conf 999693699999999958------------------6441368995379
Q 005554 498 LIGNSIGGYFVAIVACLW------------------PAVVKSVVLINSA 528 (691)
Q Consensus 498 lvGhS~GG~ial~~A~~~------------------p~~V~~lIli~~~ 528 (691)
|+|+|.|+.++-..+... .++|.++++++-+
T Consensus 86 l~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCEEEEEEEECC
T ss_conf 8750552188987875167543334567787885555208899998078
|