Citrus Sinensis ID: 005611

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------69
MSTQSWVGKLPEYPHPVASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIKQEQCSQVEHALVNHSKGEIS
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEEEEcccccccccccccEEEEEccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHcccccccccEEEcccccHHHHHHHHHHccccccEEEcccccEEEEccccccHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccccccHHHHHcHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccccc
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHEEccccccEEEHHHcccHHHHHHHHHHHHHHHccHHHHHHcccccccEEEEEcccccHHHHHHHHHHccccccEEEEEccHHHHHHHcccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHccccccccEEEEcccccccHHHHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHcccEEcHHHHHHHHHHHHccHHHcccEccHHHHHHHHHHHHcHHHHHHccccccccccccEEEEEEEccccccEEEEEccccccccccccHHHHHHHHHHHHccHHHHHEEccccccccccHHHHHHHHHHHHHHHHccccHccccEEEcccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccc
mstqswvgklpeyphpvassISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVvwpiarpfvNIFRGLILGIIENISDYIVDlsgeggilSKFYEFYtfgglsasleMLKPITLVILTMVLLIRFTlsrrpknfrkwdlwqgidfsrskaearvdgstgvkfsdvaGIDEAVEELQELVRYLKnpelfdkmgikpphgvllegppgcgkTLVAKAIageagvpfyqmaGSEFVEVLVGVGSARIRDLFKRakvnkpsvifIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIEldgfdtgkgVIFLAATnrrdlldpallrpgrfdrkirirapnakgRTEILKIHAskvkmsdsvdlssyaknlpgwtGARLAQLVQEAALVAVRKGHESilssdmddavdrltvgpkrrgielgnqgqsrRAATEVGVAMISHLLRRYENakveccdrisivprgqtlSQLVFHrlddesymferRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWnlenpmvihgepppwrkkvkfvgprldfegslyddyglteppvnfnldddIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIlnnyppqtpisrlleeenpgtlpfikqeqCSQVEHALVnhskgeis
mstqswvgklpeyphpvaSSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFtlsrrpknfrkwdlwqgidfsrskaearvdgstgvkfsdvagIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLfkrakvnkpsvifiDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAatnrrdlldpallrpgrfdrkirirapnakgrteilkihaskvkmsdsvDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHesilssdmddavDRLTVGpkrrgielgnqgqsrraaTEVGVAMISHLLRRYENAKVECCDrisivprgqtlsqLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPmvihgepppwrkkVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIKQEQCSQVEHALvnhskgeis
MSTQSWVGKLPEYPHPVASSISSRLMVElgmvtaimaaaaaivggflasaVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPitlviltmvlliRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNrrdlldpallrpgrFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGarlaqlvqeaalvavrKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIKQEQCSQVEHALVNHSKGEIS
*******************SISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHE**********************************ATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQ***************************************
***********E*****ASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGIL**FY*FYTFGGLSASLEMLKPITLVILTMVLLIRF*******************************STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGI**GNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDD***TEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN********************************************
MSTQSWVGKLPEYPHPVASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRS********STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIEL*********ATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIKQEQCSQVEHALV********
**********P**P*PVASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRPKN****************AEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNY******************************************
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSTQSWVGKLPEYPHPVASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIKQEQCSQVEHALVNHSKGEIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query688 2.2.26 [Sep-21-2011]
O78516631 ATP-dependent zinc metall yes no 0.667 0.727 0.398 9e-94
O80860695 ATP-dependent zinc metall no no 0.678 0.671 0.399 4e-93
B2UE66714 ATP-dependent zinc metall yes no 0.688 0.663 0.390 1e-92
P73179665 ATP-dependent zinc metall N/A no 0.577 0.596 0.452 1e-92
Q9WZ49610 ATP-dependent zinc metall yes no 0.75 0.845 0.375 5e-92
B4U7U4636 ATP-dependent zinc metall yes no 0.662 0.716 0.402 8e-92
P51327628 ATP-dependent zinc metall N/A no 0.665 0.729 0.401 9e-92
B3DY14641 ATP-dependent zinc metall yes no 0.591 0.634 0.421 1e-91
Q1AV13651 ATP-dependent zinc metall yes no 0.545 0.576 0.455 1e-91
Q2JNP0638 ATP-dependent zinc metall yes no 0.675 0.728 0.389 3e-91
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH PE=3 SV=1 Back     alignment and function desciption
 Score =  345 bits (884), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 199/500 (39%), Positives = 303/500 (60%), Gaps = 41/500 (8%)

Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
           Q ++F +SKA  +++  TGV F+DVAG+DEA EE +E+V +LK PE F  +G K P GVL
Sbjct: 151 QAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVL 210

Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
           L GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F
Sbjct: 211 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVF 270

Query: 273 IDEIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRR 331
           IDEIDA+  +R  GI              ERE TLNQLL E+DGF+   G+I +AATNR 
Sbjct: 271 IDEIDAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRV 321

Query: 332 DLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGAR 391
           D+LD ALLRPGRFDR++ +  P+ KGR EIL +HA   K+  S+ L   AK  PG++GA 
Sbjct: 322 DVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGAD 381

Query: 392 LAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAM 451
           LA L+ EAA++  R+  + I  S++D ++DR+  G + + + + ++ +   A  EVG A+
Sbjct: 382 LANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGKAL-VDSKTKRLIAYHEVGHAI 440

Query: 452 ISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGR 511
           I  LL+ ++  +     ++++VPRGQ      F   +D+S +   R Q+L R+   LGGR
Sbjct: 441 IGTLLKHHDPVQ-----KVTLVPRGQAKGLTWFTPSEDQSLI--SRSQILARIMGALGGR 493

Query: 512 AAEEVIYG-QDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRL 570
           AAEEV++G  + +  + N L   + +AR+++T + + N                 +GP L
Sbjct: 494 AAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSN-----------------IGP-L 535

Query: 571 DFEGSLYDDYGLTEPPVNFNLDDDIAWRTE----ELLRDMYGRTVTLLRRHHAALLKTVK 626
             E    D +       +    +DIA R +     +++  +  TV +++ +   + K V 
Sbjct: 536 SLESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVD 595

Query: 627 VLLNQKEIGREEIDFILNNY 646
           +L+ ++ I  +E   I+ ++
Sbjct: 596 LLIEKETIDGDEFRQIVGDF 615
Acts as a processive, ATP-dependent zinc metallopeptidase.
Guillardia theta (taxid: 55529)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1 Back     alignment and function description
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii (strain 12J) GN=ftsH PE=3 SV=1 Back     alignment and function description
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1 Back     alignment and function description
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=ftsH PE=1 SV=1 Back     alignment and function description
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=ftsH PE=3 SV=1 Back     alignment and function description
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea GN=ftsH PE=3 SV=1 Back     alignment and function description
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum infernorum (isolate V4) GN=ftsH2 PE=3 SV=1 Back     alignment and function description
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1 Back     alignment and function description
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query688
224058199 932 predicted protein [Populus trichocarpa] 0.991 0.731 0.870 0.0
225436170 907 PREDICTED: ATP-dependent zinc metallopro 0.994 0.754 0.843 0.0
356527688 925 PREDICTED: ATP-dependent zinc metallopro 0.991 0.737 0.840 0.0
255537837 925 Cell division protein ftsH, putative [Ri 0.985 0.732 0.860 0.0
18416240 946 FtsH extracellular protease [Arabidopsis 0.986 0.717 0.817 0.0
297803738 933 hypothetical protein ARALYDRAFT_492469 [ 0.986 0.727 0.814 0.0
449506190 962 PREDICTED: ATP-dependent zinc metallopro 0.970 0.694 0.802 0.0
168002938 958 predicted protein [Physcomitrella patens 0.947 0.680 0.586 0.0
168033123 966 predicted protein [Physcomitrella patens 0.933 0.664 0.582 0.0
302782403 894 hypothetical protein SELMODRAFT_98591 [S 0.946 0.728 0.541 0.0
>gi|224058199|ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/682 (87%), Positives = 638/682 (93%)

Query: 5   SWVGKLPEYPHPVASSISSRLMVELGMVTAIMAAAAAIVGGFLASAVFAVTSFIFVTTVY 64
           S VGKLPEYPHPVASSISSR+MVELGMVTA+MAAAA +VGGFLASAVFAVTSFIFV TVY
Sbjct: 249 SSVGKLPEYPHPVASSISSRMMVELGMVTAVMAAAAVVVGGFLASAVFAVTSFIFVATVY 308

Query: 65  VVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPI 124
           V WPIA+PFV +F GL   I+E + DY+VD+  +GG+ SKFYEFYTFGG+SAS+EMLKPI
Sbjct: 309 VAWPIAKPFVKLFLGLTFSILEGVWDYVVDIFSDGGLFSKFYEFYTFGGVSASIEMLKPI 368

Query: 125 TLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV 184
            LV+LTMVLL+RFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV
Sbjct: 369 MLVLLTMVLLVRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV 428

Query: 185 EELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 244
           EELQELVRYLKNPELFDKMGIKPPHGVLLEG PGCGKTLVAKAIAGEAGVPFYQMAGSEF
Sbjct: 429 EELQELVRYLKNPELFDKMGIKPPHGVLLEGAPGCGKTLVAKAIAGEAGVPFYQMAGSEF 488

Query: 245 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERET 304
           VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK++TDHLYNAATQERET
Sbjct: 489 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERET 548

Query: 305 TLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKI 364
           TLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR PNAKGR EILKI
Sbjct: 549 TLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRPPNAKGRLEILKI 608

Query: 365 HASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLT 424
           HASKVKMSDSVDLS+Y KNLPGWTGA+LAQLVQEAALVAVR+GH +IL SDMDDAVDRLT
Sbjct: 609 HASKVKMSDSVDLSTYGKNLPGWTGAKLAQLVQEAALVAVRQGHAAILQSDMDDAVDRLT 668

Query: 425 VGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVF 484
           VGPKR GIELG+QGQ RRA TE+GV M SHLLRRYENAKVECCDRISIVPRGQTLSQLVF
Sbjct: 669 VGPKRVGIELGHQGQCRRATTELGVVMTSHLLRRYENAKVECCDRISIVPRGQTLSQLVF 728

Query: 485 HRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIW 544
           HRLDDESYMFER PQLLHRLQV LGGRAAEEVIYG+DTSRASV+YLADASWLARKI+TIW
Sbjct: 729 HRLDDESYMFERLPQLLHRLQVFLGGRAAEEVIYGRDTSRASVSYLADASWLARKIITIW 788

Query: 545 NLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLR 604
           NLENPMVIHGEPPPWRKKV+F+GPRLDFEGSLYDDY L EPP+NFNLDD +A RTE+L+ 
Sbjct: 789 NLENPMVIHGEPPPWRKKVRFMGPRLDFEGSLYDDYDLIEPPINFNLDDQVAQRTEKLIC 848

Query: 605 DMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTL 664
           DMYGRTV+LL+RHHAALLK VKVLLNQKEI  EEID+ILNNYPPQT +S LLEEENPG L
Sbjct: 849 DMYGRTVSLLKRHHAALLKAVKVLLNQKEISGEEIDYILNNYPPQTRLSLLLEEENPGIL 908

Query: 665 PFIKQEQCSQVEHALVNHSKGE 686
           PF KQE  +++++AL+  S+G+
Sbjct: 909 PFFKQELENELDYALLTTSEGK 930

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225436170|ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera] gi|296090151|emb|CBI39970.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356527688|ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255537837|ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis] gi|223549884|gb|EEF51372.1| Cell division protein ftsH, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18416240|ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana] gi|2262118|gb|AAB63626.1| cell division protein isolog [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell division protein-like [Arabidopsis thaliana] gi|7269243|emb|CAB81312.1| cell division protein-like [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH extracellular protease [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803738|ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449506190|ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|168002938|ref|XP_001754170.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694724|gb|EDQ81071.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|168033123|ref|XP_001769066.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679700|gb|EDQ66144.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|302782403|ref|XP_002972975.1| hypothetical protein SELMODRAFT_98591 [Selaginella moellendorffii] gi|300159576|gb|EFJ26196.1| hypothetical protein SELMODRAFT_98591 [Selaginella moellendorffii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query688
TAIR|locus:2138146946 FtsHi1 "FTSH inactive protease 0.986 0.717 0.736 2.6e-269
UNIPROTKB|Q55700627 ftsH2 "ATP-dependent zinc meta 0.569 0.625 0.415 9.6e-73
TIGR_CMR|GSU_1809610 GSU_1809 "cell division protei 0.546 0.616 0.391 4.8e-71
UNIPROTKB|Q3AFJ8619 ftsH "ATP-dependent zinc metal 0.550 0.612 0.385 6.8e-71
TIGR_CMR|CHY_0214619 CHY_0214 "cell division protei 0.550 0.612 0.385 6.8e-71
TAIR|locus:2052806695 VAR2 "VARIEGATED 2" [Arabidops 0.547 0.542 0.404 1.3e-70
TAIR|locus:2009235685 FTSH8 "FTSH protease 8" [Arabi 0.571 0.573 0.393 1.1e-69
TAIR|locus:2011952716 FTSH1 "FTSH protease 1" [Arabi 0.540 0.519 0.388 3.7e-68
TIGR_CMR|NSE_0423636 NSE_0423 "ATP-dependent metall 0.553 0.599 0.392 1.9e-67
TIGR_CMR|BA_0064633 BA_0064 "cell division protein 0.550 0.598 0.382 3.1e-67
TAIR|locus:2138146 FtsHi1 "FTSH inactive protease 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2590 (916.8 bits), Expect = 2.6e-269, P = 2.6e-269
 Identities = 501/680 (73%), Positives = 561/680 (82%)

Query:     5 SWVGKLPEYPHPVASSISSRLMVEXXXXXXXXXXXXXXXXXXXXXXVFAVTSFIFVTTVY 64
             SWVGK+ ++P+PVASSISSR+MVE                      VFAVTSF FVTTVY
Sbjct:   260 SWVGKVADFPNPVASSISSRVMVELGMVTAVIAAAAVVVGGFLASAVFAVTSFAFVTTVY 319

Query:    65 VVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPX 124
             VVWPIA+PF+ +F G+ LG++E   DYIVD+  +GGI S+  +FYTFGG+++SLEMLKP 
Sbjct:   320 VVWPIAKPFLKLFVGVFLGVLEKSWDYIVDVLADGGIFSRISDFYTFGGVASSLEMLKPI 379

Query:   125 XXXXXXXXXXXRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV 184
                        RFTLSRRPKNFRKWDLWQGI FS+SKAEARVDGSTGVKF+DVAGIDEAV
Sbjct:   380 LLVVMTMVLLVRFTLSRRPKNFRKWDLWQGIAFSQSKAEARVDGSTGVKFADVAGIDEAV 439

Query:   185 EELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 244
             +ELQELV+YLKNP+LFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF
Sbjct:   440 DELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 499

Query:   245 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERET 304
             VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK+ +D LYNAATQERET
Sbjct:   500 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERET 559

Query:   305 TLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKI 364
             TLNQLLIELDGFDTGKGVIFL ATN              FDRKIR+R PNAKGR +ILKI
Sbjct:   560 TLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKI 619

Query:   365 HASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLT 424
             HASKVKMSDSVDLSSYA NLPGW+G                K H SIL SDMDDAVDRLT
Sbjct:   620 HASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLT 679

Query:   425 VGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVF 484
             VGP R G+ELG+QGQ RRA TEVGVA+ SHLL RYENAK+E CDR+SI+PRGQTLSQ+VF
Sbjct:   680 VGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDRVSIIPRGQTLSQVVF 739

Query:   485 HRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIW 544
             HRLDDESYMF R PQLLHRLQVLLGGRAAEEVIYG DTS+ASV+YL+DASWLARKILTIW
Sbjct:   740 HRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSDTSKASVDYLSDASWLARKILTIW 799

Query:   545 NLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLR 604
             NLENPMVIHGEPPPWRK+ +FVGPRLDFEGSLYDDY L EPPVNFN+DD++A R+EEL+ 
Sbjct:   800 NLENPMVIHGEPPPWRKRPQFVGPRLDFEGSLYDDYDLVEPPVNFNMDDEVAHRSEELIS 859

Query:   605 DMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTL 664
              MY +TV+LLR++  ALLKTVKVLLNQKEI  E IDFIL++YPPQTP++ LL+E+NPG+L
Sbjct:   860 QMYNKTVSLLRQNQTALLKTVKVLLNQKEISGEAIDFILDHYPPQTPLNSLLQEQNPGSL 919

Query:   665 PFIKQE-QCSQVEHALVNHS 683
             PF+ +  +    +  LVNHS
Sbjct:   920 PFVPEHLRRESGDFVLVNHS 939
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0009658 "chloroplast organization" evidence=IMP
GO:0016887 "ATPase activity" evidence=ISS
GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0010020 "chloroplast fission" evidence=IMP
GO:0009536 "plastid" evidence=IDA
UNIPROTKB|Q55700 ftsH2 "ATP-dependent zinc metalloprotease FtsH 2" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1809 GSU_1809 "cell division protein FtsH" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q3AFJ8 ftsH "ATP-dependent zinc metalloprotease FtsH" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0214 CHY_0214 "cell division protein FtsH" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TAIR|locus:2052806 VAR2 "VARIEGATED 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009235 FTSH8 "FTSH protease 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011952 FTSH1 "FTSH protease 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|NSE_0423 NSE_0423 "ATP-dependent metalloprotease FtsH" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms
TIGR_CMR|BA_0064 BA_0064 "cell division protein FtsH" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.240.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000797
hypothetical protein (932 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_I3061
hypothetical protein; One of the essential components for the initiation of protein synthesis. [...] (1020 aa)
  •     0.441
gw1.XI.571.1
hypothetical protein; One of the essential components for the initiation of protein synthesis. [...] (1031 aa)
  •     0.439
gw1.164.134.1
annotation not avaliable (156 aa)
  •     0.430
gw1.XVIII.243.1
hypothetical protein (246 aa)
  •     0.421
gw1.IX.3418.1
annotation not avaliable (336 aa)
  •     0.407
estExt_Genewise1_v1.C_LG_XIII2490
hypothetical protein (500 aa)
  •     0.403
fgenesh4_pm.C_scaffold_28000088
hypothetical protein (535 aa)
  •     0.400

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
TIGR01241495 TIGR01241, FtsH_fam, ATP-dependent metalloprotease 1e-147
COG0465596 COG0465, HflB, ATP-dependent Zn proteases [Posttra 1e-127
CHL00176638 CHL00176, ftsH, cell division protein; Validated 1e-122
PRK10733644 PRK10733, hflB, ATP-dependent metalloprotease; Rev 1e-99
PRK03992389 PRK03992, PRK03992, proteasome-activating nucleoti 5e-94
COG1222406 COG1222, RPT1, ATP-dependent 26S proteasome regula 3e-91
TIGR01242364 TIGR01242, 26Sp45, 26S proteasome subunit P45 fami 6e-77
PTZ00454398 PTZ00454, PTZ00454, 26S protease regulatory subuni 7e-64
TIGR01243733 TIGR01243, CDC48, AAA family ATPase, CDC48 subfami 9e-64
COG0464494 COG0464, SpoVK, ATPases of the AAA+ class [Posttra 9e-63
PTZ00361438 PTZ00361, PTZ00361, 26 proteosome regulatory subun 3e-61
TIGR01243733 TIGR01243, CDC48, AAA family ATPase, CDC48 subfami 9e-59
pfam00004131 pfam00004, AAA, ATPase family associated with vari 1e-46
COG1223368 COG1223, COG1223, Predicted ATPase (AAA+ superfami 1e-45
TIGR03689512 TIGR03689, pup_AAA, proteasome ATPase 3e-38
COG0464494 COG0464, SpoVK, ATPases of the AAA+ class [Posttra 3e-32
cd00009151 cd00009, AAA, The AAA+ (ATPases Associated with a 3e-24
pfam01434212 pfam01434, Peptidase_M41, Peptidase family M41 2e-20
smart00382148 smart00382, AAA, ATPases associated with a variety 2e-16
CHL00195489 CHL00195, ycf46, Ycf46; Provisional 5e-16
COG0714329 COG0714, COG0714, MoxR-like ATPases [General funct 1e-09
PRK13342413 PRK13342, PRK13342, recombination factor protein R 6e-09
COG2256436 COG2256, MGS1, ATPase related to the helicase subu 2e-08
PRK04195482 PRK04195, PRK04195, replication factor C large sub 4e-08
TIGR00763775 TIGR00763, lon, ATP-dependent protease La 3e-07
pfam07728135 pfam07728, AAA_5, AAA domain (dynein-related subfa 2e-06
COG1224450 COG1224, TIP49, DNA helicase TIP49, TBP-interactin 2e-05
COG0466782 COG0466, Lon, ATP-dependent Lon protease, bacteria 2e-05
pfam06068395 pfam06068, TIP49, TIP49 C-terminus 6e-05
TIGR02639730 TIGR02639, ClpA, ATP-dependent Clp protease ATP-bi 0.001
PHA02544316 PHA02544, 44, clamp loader, small subunit; Provisi 0.002
TIGR02881261 TIGR02881, spore_V_K, stage V sporulation protein 0.002
TIGR02928365 TIGR02928, TIGR02928, orc1/cdc6 family replication 0.002
pfam05496231 pfam05496, RuvB_N, Holliday junction DNA helicase 0.002
PRK10787784 PRK10787, PRK10787, DNA-binding ATP-dependent prot 0.002
COG2255332 COG2255, RuvB, Holliday junction resolvasome, heli 0.003
PLN03025319 PLN03025, PLN03025, replication factor C subunit; 0.003
pfam01078207 pfam01078, Mg_chelatase, Magnesium chelatase, subu 0.003
PRK00080328 PRK00080, ruvB, Holliday junction DNA helicase Ruv 0.004
>gnl|CDD|233327 TIGR01241, FtsH_fam, ATP-dependent metalloprotease FtsH Back     alignment and domain information 
 Score =  437 bits (1126), Expect = e-147
 Identities = 215/535 (40%), Positives = 305/535 (57%), Gaps = 50/535 (9%)

Query: 118 LEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDV 177
           L  L  +   IL +V +  F   +           +   F +SKA+   +    V F DV
Sbjct: 3   LGFLFSLLPPILLLVGVWFFFRRQMQGGGG-----RAFSFGKSKAKLLNEEKPKVTFKDV 57

Query: 178 AGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 237
           AGIDEA EEL E+V +LKNP  F K+G K P GVLL GPPG GKTL+AKA+AGEAGVPF+
Sbjct: 58  AGIDEAKEELMEIVDFLKNPSKFTKLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFF 117

Query: 238 QMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNA 297
            ++GS+FVE+ VGVG++R+RDLF++AK N P +IFIDEIDA+  +R        D     
Sbjct: 118 SISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGND----- 172

Query: 298 ATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKG 357
              ERE TLNQLL+E+DGF T  GVI +AATNR D+LDPALLRPGRFDR++ +  P+ KG
Sbjct: 173 ---EREQTLNQLLVEMDGFGTNTGVIVIAATNRPDVLDPALLRPGRFDRQVVVDLPDIKG 229

Query: 358 RTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMD 417
           R EILK+HA   K++  VDL + A+  PG++GA LA L+ EAAL+A RK    I  +D++
Sbjct: 230 REEILKVHAKNKKLAPDVDLKAVARRTPGFSGADLANLLNEAALLAARKNKTEITMNDIE 289

Query: 418 DAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQ 477
           +A+DR+  GP+++   +  + +   A  E G A++  LL+  +   V    +++I+PRGQ
Sbjct: 290 EAIDRVIAGPEKKSRVISEKEKKLVAYHEAGHALVGLLLK--DADPV---HKVTIIPRGQ 344

Query: 478 TLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLA 537
            L       L +E      + QLL ++ VLLGGRAAEE+I+G+ T+ AS N +  A+ +A
Sbjct: 345 ALG--YTQFLPEEDKYLYTKSQLLAQIAVLLGGRAAEEIIFGEVTTGAS-NDIKQATNIA 401

Query: 538 RKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAW 597
           R ++T W + +                 +GP      +   D G       F    + + 
Sbjct: 402 RAMVTEWGMSDK----------------LGPV-----AYGSDGGDVFLGRGFAKAKEYSE 440

Query: 598 RTEE--------LLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 644
            T          ++ + Y R   +L  +   L    K LL ++ I REEI  +L 
Sbjct: 441 ETAREIDEEVKRIIEEAYKRAKQILTENRDELELLAKALLEKETITREEIKELLA 495

HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides]. Length = 495
>gnl|CDD|223541 COG0465, HflB, ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|214386 CHL00176, ftsH, cell division protein; Validated Back     alignment and domain information
>gnl|CDD|182683 PRK10733, hflB, ATP-dependent metalloprotease; Reviewed Back     alignment and domain information
>gnl|CDD|179699 PRK03992, PRK03992, proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>gnl|CDD|224143 COG1222, RPT1, ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|130309 TIGR01242, 26Sp45, 26S proteasome subunit P45 family Back     alignment and domain information
>gnl|CDD|240423 PTZ00454, PTZ00454, 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>gnl|CDD|233328 TIGR01243, CDC48, AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>gnl|CDD|223540 COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|185575 PTZ00361, PTZ00361, 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>gnl|CDD|233328 TIGR01243, CDC48, AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>gnl|CDD|215649 pfam00004, AAA, ATPase family associated with various cellular activities (AAA) Back     alignment and domain information
>gnl|CDD|224144 COG1223, COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>gnl|CDD|200312 TIGR03689, pup_AAA, proteasome ATPase Back     alignment and domain information
>gnl|CDD|223540 COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|99707 cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>gnl|CDD|216502 pfam01434, Peptidase_M41, Peptidase family M41 Back     alignment and domain information
>gnl|CDD|214640 smart00382, AAA, ATPases associated with a variety of cellular activities Back     alignment and domain information
>gnl|CDD|177094 CHL00195, ycf46, Ycf46; Provisional Back     alignment and domain information
>gnl|CDD|223786 COG0714, COG0714, MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>gnl|CDD|237355 PRK13342, PRK13342, recombination factor protein RarA; Reviewed Back     alignment and domain information
>gnl|CDD|225165 COG2256, MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional Back     alignment and domain information
>gnl|CDD|233119 TIGR00763, lon, ATP-dependent protease La Back     alignment and domain information
>gnl|CDD|219538 pfam07728, AAA_5, AAA domain (dynein-related subfamily) Back     alignment and domain information
>gnl|CDD|224145 COG1224, TIP49, DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>gnl|CDD|223542 COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|147949 pfam06068, TIP49, TIP49 C-terminus Back     alignment and domain information
>gnl|CDD|233959 TIGR02639, ClpA, ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>gnl|CDD|222866 PHA02544, 44, clamp loader, small subunit; Provisional Back     alignment and domain information
>gnl|CDD|163057 TIGR02881, spore_V_K, stage V sporulation protein K Back     alignment and domain information
>gnl|CDD|234063 TIGR02928, TIGR02928, orc1/cdc6 family replication initiation protein Back     alignment and domain information
>gnl|CDD|203260 pfam05496, RuvB_N, Holliday junction DNA helicase ruvB N-terminus Back     alignment and domain information
>gnl|CDD|182730 PRK10787, PRK10787, DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>gnl|CDD|225164 COG2255, RuvB, Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|178596 PLN03025, PLN03025, replication factor C subunit; Provisional Back     alignment and domain information
>gnl|CDD|144608 pfam01078, Mg_chelatase, Magnesium chelatase, subunit ChlI Back     alignment and domain information
>gnl|CDD|234619 PRK00080, ruvB, Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 688
KOG0734752 consensus AAA+-type ATPase containing the peptidas 100.0
COG0465596 HflB ATP-dependent Zn proteases [Posttranslational 100.0
KOG0731774 consensus AAA+-type ATPase containing the peptidas 100.0
CHL00176638 ftsH cell division protein; Validated 100.0
PRK10733644 hflB ATP-dependent metalloprotease; Reviewed 100.0
TIGR01241495 FtsH_fam ATP-dependent metalloprotease FtsH. HflB( 100.0
COG1222406 RPT1 ATP-dependent 26S proteasome regulatory subun 100.0
CHL00206 2281 ycf2 Ycf2; Provisional 100.0
KOG0730693 consensus AAA+-type ATPase [Posttranslational modi 100.0
KOG0733802 consensus Nuclear AAA ATPase (VCP subfamily) [Post 100.0
KOG0727408 consensus 26S proteasome regulatory complex, ATPas 100.0
KOG0733 802 consensus Nuclear AAA ATPase (VCP subfamily) [Post 100.0
KOG0728404 consensus 26S proteasome regulatory complex, ATPas 100.0
KOG0652424 consensus 26S proteasome regulatory complex, ATPas 100.0
KOG0729435 consensus 26S proteasome regulatory complex, ATPas 100.0
KOG0726440 consensus 26S proteasome regulatory complex, ATPas 100.0
COG1223368 Predicted ATPase (AAA+ superfamily) [General funct 100.0
KOG0736953 consensus Peroxisome assembly factor 2 containing 100.0
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 100.0
KOG0738491 consensus AAA+-type ATPase [Posttranslational modi 100.0
PF01434213 Peptidase_M41: Peptidase family M41 This is family 100.0
PRK03992389 proteasome-activating nucleotidase; Provisional 100.0
PTZ00361438 26 proteosome regulatory subunit 4-like protein; P 100.0
KOG0735952 consensus AAA+-type ATPase [Posttranslational modi 100.0
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 100.0
COG0464494 SpoVK ATPases of the AAA+ class [Posttranslational 100.0
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 100.0
CHL00195489 ycf46 Ycf46; Provisional 100.0
KOG0737386 consensus AAA+-type ATPase [Posttranslational modi 100.0
KOG0739439 consensus AAA+-type ATPase [Posttranslational modi 100.0
KOG0651388 consensus 26S proteasome regulatory complex, ATPas 100.0
TIGR03689512 pup_AAA proteasome ATPase. In the Actinobacteria, 100.0
KOG0730693 consensus AAA+-type ATPase [Posttranslational modi 99.97
KOG0741744 consensus AAA+-type ATPase [Posttranslational modi 99.97
PLN00020413 ribulose bisphosphate carboxylase/oxygenase activa 99.97
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 99.97
KOG0732 1080 consensus AAA+-type ATPase containing the bromodom 99.97
KOG0740428 consensus AAA+-type ATPase [Posttranslational modi 99.96
KOG0742630 consensus AAA+-type ATPase [Posttranslational modi 99.85
CHL00181287 cbbX CbbX; Provisional 99.84
KOG0058716 consensus Peptide exporter, ABC superfamily [Intra 99.84
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 99.84
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 99.83
PF00004132 AAA: ATPase family associated with various cellula 99.82
KOG0743457 consensus AAA+-type ATPase [Posttranslational modi 99.81
KOG0744423 consensus AAA+-type ATPase [Posttranslational modi 99.77
PF05496233 RuvB_N: Holliday junction DNA helicase ruvB N-term 99.77
KOG0736953 consensus Peroxisome assembly factor 2 containing 99.77
PRK00080328 ruvB Holliday junction DNA helicase RuvB; Reviewed 99.76
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 99.76
TIGR00635305 ruvB Holliday junction DNA helicase, RuvB subunit. 99.76
KOG0735952 consensus AAA+-type ATPase [Posttranslational modi 99.75
COG2255332 RuvB Holliday junction resolvasome, helicase subun 99.73
COG0464494 SpoVK ATPases of the AAA+ class [Posttranslational 99.7
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 99.7
TIGR00763775 lon ATP-dependent protease La. This protein is ind 99.69
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 99.68
KOG0056790 consensus Heavy metal exporter HMT1, ABC superfami 99.67
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 99.66
COG2256436 MGS1 ATPase related to the helicase subunit of the 99.66
TIGR00362405 DnaA chromosomal replication initiator protein Dna 99.65
COG0466782 Lon ATP-dependent Lon protease, bacterial type [Po 99.64
TIGR02902531 spore_lonB ATP-dependent protease LonB. Members of 99.64
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 99.64
PRK00149450 dnaA chromosomal replication initiation protein; R 99.64
TIGR02928365 orc1/cdc6 family replication initiation protein. M 99.64
PRK12323 700 DNA polymerase III subunits gamma and tau; Provisi 99.63
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 99.63
PRK07003 830 DNA polymerase III subunits gamma and tau; Validat 99.62
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 99.62
KOG00551228 consensus Multidrug/pheromone exporter, ABC superf 99.61
COG5265497 ATM1 ABC-type transport system involved in Fe-S cl 99.6
PRK06893229 DNA replication initiation factor; Validated 99.6
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 99.6
PRK14960 702 DNA polymerase III subunits gamma and tau; Provisi 99.6
TIGR01193708 bacteriocin_ABC ABC-type bacteriocin transporter. 99.6
PRK04195482 replication factor C large subunit; Provisional 99.59
TIGR03796710 NHPM_micro_ABC1 NHPM bacteriocin system ABC transp 99.59
PRK14088440 dnaA chromosomal replication initiation protein; P 99.59
PRK14958509 DNA polymerase III subunits gamma and tau; Provisi 99.59
PRK11176582 lipid transporter ATP-binding/permease protein; Pr 99.59
PRK13342413 recombination factor protein RarA; Reviewed 99.59
TIGR03375694 type_I_sec_LssB type I secretion system ATPase, Ls 99.59
PRK00411394 cdc6 cell division control protein 6; Reviewed 99.59
KOG2004906 consensus Mitochondrial ATP-dependent protease PIM 99.59
COG1132567 MdlB ABC-type multidrug transport system, ATPase a 99.59
PRK07994 647 DNA polymerase III subunits gamma and tau; Validat 99.58
TIGR03797686 NHPM_micro_ABC2 NHPM bacteriocin system ABC transp 99.57
PRK08691 709 DNA polymerase III subunits gamma and tau; Validat 99.57
PRK14086617 dnaA chromosomal replication initiation protein; P 99.57
TIGR03345 852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 99.57
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 99.56
PRK14949 944 DNA polymerase III subunits gamma and tau; Provisi 99.56
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 99.56
PRK08903227 DnaA regulatory inactivator Hda; Validated 99.56
PRK14951 618 DNA polymerase III subunits gamma and tau; Provisi 99.56
PRK11160574 cysteine/glutathione ABC transporter membrane/ATP- 99.55
TIGR02857529 CydD thiol reductant ABC exporter, CydD subunit. U 99.55
PRK12402337 replication factor C small subunit 2; Reviewed 99.54
PRK08084235 DNA replication initiation factor; Provisional 99.54
PLN03025319 replication factor C subunit; Provisional 99.54
TIGR02203571 MsbA_lipidA lipid A export permease/ATP-binding pr 99.54
PRK14963504 DNA polymerase III subunits gamma and tau; Provisi 99.53
TIGR01846694 type_I_sec_HlyB type I secretion system ABC transp 99.53
TIGR00958711 3a01208 Conjugate Transporter-2 (CT2) Family prote 99.53
PRK12422445 chromosomal replication initiation protein; Provis 99.53
PRK11174588 cysteine/glutathione ABC transporter membrane/ATP- 99.53
PRK14969527 DNA polymerase III subunits gamma and tau; Provisi 99.52
PRK05563559 DNA polymerase III subunits gamma and tau; Validat 99.51
PRK14957546 DNA polymerase III subunits gamma and tau; Provisi 99.51
PRK10865 857 protein disaggregation chaperone; Provisional 99.51
PRK14959 624 DNA polymerase III subunits gamma and tau; Provisi 99.51
PRK07940394 DNA polymerase III subunit delta'; Validated 99.51
TIGR02397355 dnaX_nterm DNA polymerase III, subunit gamma and t 99.5
TIGR01192585 chvA glucan exporter ATP-binding protein. This mod 99.5
PRK13341 725 recombination factor protein RarA/unknown domain f 99.5
PRK10787784 DNA-binding ATP-dependent protease La; Provisional 99.5
PRK14952584 DNA polymerase III subunits gamma and tau; Provisi 99.5
PRK07764 824 DNA polymerase III subunits gamma and tau; Validat 99.5
TIGR03346 852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 99.5
PRK13657588 cyclic beta-1,2-glucan ABC transporter; Provisiona 99.5
PRK08727233 hypothetical protein; Validated 99.5
PRK14087450 dnaA chromosomal replication initiation protein; P 99.5
PTZ001121164 origin recognition complex 1 protein; Provisional 99.5
PRK10790592 putative multidrug transporter membrane\ATP-bindin 99.48
PTZ002651466 multidrug resistance protein (mdr1); Provisional 99.48
PHA02544316 44 clamp loader, small subunit; Provisional 99.47
CHL00095 821 clpC Clp protease ATP binding subunit 99.47
PRK07133 725 DNA polymerase III subunits gamma and tau; Validat 99.47
PRK10789569 putative multidrug transporter membrane\ATP-bindin 99.47
PRK05896605 DNA polymerase III subunits gamma and tau; Validat 99.46
PRK09111598 DNA polymerase III subunits gamma and tau; Validat 99.46
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 99.46
PRK08451535 DNA polymerase III subunits gamma and tau; Validat 99.45
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 99.45
KOG0989346 consensus Replication factor C, subunit RFC4 [Repl 99.44
PRK14965576 DNA polymerase III subunits gamma and tau; Provisi 99.44
PRK14970367 DNA polymerase III subunits gamma and tau; Provisi 99.44
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 99.44
PRK14953486 DNA polymerase III subunits gamma and tau; Provisi 99.44
PRK14955397 DNA polymerase III subunits gamma and tau; Provisi 99.44
PRK13407334 bchI magnesium chelatase subunit I; Provisional 99.43
KOG0057591 consensus Mitochondrial Fe/S cluster exporter, ABC 99.43
COG0593408 DnaA ATPase involved in DNA replication initiation 99.43
KOG2028554 consensus ATPase related to the helicase subunit o 99.43
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 99.43
PRK05642234 DNA replication initiation factor; Validated 99.42
PRK06620214 hypothetical protein; Validated 99.42
PRK06305451 DNA polymerase III subunits gamma and tau; Validat 99.42
PRK06647563 DNA polymerase III subunits gamma and tau; Validat 99.41
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 99.41
PRK00440319 rfc replication factor C small subunit; Reviewed 99.41
TIGR02204576 MsbA_rel ABC transporter, permease/ATP-binding pro 99.4
CHL00081350 chlI Mg-protoporyphyrin IX chelatase 99.39
PRK14954620 DNA polymerase III subunits gamma and tau; Provisi 99.38
TIGR00390441 hslU ATP-dependent protease HslVU, ATPase subunit. 99.38
TIGR00382413 clpX endopeptidase Clp ATP-binding regulatory subu 99.38
TIGR01842544 type_I_sec_PrtD type I secretion system ABC transp 99.38
COG4618580 ArpD ABC-type protease/lipase transport system, AT 99.37
COG2812515 DnaX DNA polymerase III, gamma/tau subunits [DNA r 99.37
PRK14948 620 DNA polymerase III subunits gamma and tau; Provisi 99.37
KOG0055 1228 consensus Multidrug/pheromone exporter, ABC superf 99.37
TIGR02030337 BchI-ChlI magnesium chelatase ATPase subunit I. Th 99.37
PRK05201443 hslU ATP-dependent protease ATP-binding subunit Hs 99.36
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 99.36
TIGR02903615 spore_lon_C ATP-dependent protease, Lon family. Me 99.36
PRK14950585 DNA polymerase III subunits gamma and tau; Provisi 99.35
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 99.33
PRK09087226 hypothetical protein; Validated 99.32
PTZ00265 1466 multidrug resistance protein (mdr1); Provisional 99.31
TIGR009571522 MRP_assoc_pro multi drug resistance-associated pro 99.31
TIGR01650327 PD_CobS cobaltochelatase, CobS subunit. This model 99.3
COG1224450 TIP49 DNA helicase TIP49, TBP-interacting protein 99.3
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 99.3
PRK14971 614 DNA polymerase III subunits gamma and tau; Provisi 99.28
TIGR00368499 Mg chelatase-related protein. The N-terminal end m 99.28
COG3829560 RocR Transcriptional regulator containing PAS, AAA 99.25
TIGR02442633 Cob-chelat-sub cobaltochelatase subunit. A number 99.24
PRK09112351 DNA polymerase III subunit delta'; Validated 99.24
COG4988559 CydD ABC-type transport system involved in cytochr 99.24
TIGR01194555 cyc_pep_trnsptr cyclic peptide transporter. This m 99.23
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 99.23
COG3604550 FhlA Transcriptional regulator containing GAF, AAA 99.21
PLN03232 1495 ABC transporter C family member; Provisional 99.21
PRK13531498 regulatory ATPase RavA; Provisional 99.21
PF05621302 TniB: Bacterial TniB protein; InterPro: IPR008868 99.2
PLN03130 1622 ABC transporter C family member; Provisional 99.18
PTZ002431560 ABC transporter; Provisional 99.18
PHA02244383 ATPase-like protein 99.18
COG2607287 Predicted ATPase (AAA+ superfamily) [General funct 99.17
PRK09862506 putative ATP-dependent protease; Provisional 99.16
COG0542786 clpA ATP-binding subunits of Clp protease and DnaK 99.16
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 99.16
smart00350509 MCM minichromosome maintenance proteins. 99.16
PRK07471365 DNA polymerase III subunit delta'; Validated 99.15
PRK10865857 protein disaggregation chaperone; Provisional 99.15
PRK05564313 DNA polymerase III subunit delta'; Validated 99.15
COG0714329 MoxR-like ATPases [General function prediction onl 99.14
COG4987573 CydC ABC-type transport system involved in cytochr 99.13
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 99.12
KOG1969877 consensus DNA replication checkpoint protein CHL12 99.11
smart00382148 AAA ATPases associated with a variety of cellular 99.1
COG2204464 AtoC Response regulator containing CheY-like recei 99.1
PRK15424538 propionate catabolism operon regulatory protein Pr 99.09
CHL00095821 clpC Clp protease ATP binding subunit 99.09
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 99.09
PRK07399314 DNA polymerase III subunit delta'; Validated 99.08
TIGR02329526 propionate_PrpR propionate catabolism operon regul 99.08
TIGR00764608 lon_rel lon-related putative ATP-dependent proteas 99.08
COG0606490 Predicted ATPase with chaperone activity [Posttran 99.08
PF01078206 Mg_chelatase: Magnesium chelatase, subunit ChlI; I 99.05
COG1221403 PspF Transcriptional regulators containing an AAA- 99.05
TIGR00602637 rad24 checkpoint protein rad24. This family is bas 99.04
PRK11331459 5-methylcytosine-specific restriction enzyme subun 99.03
COG0542 786 clpA ATP-binding subunits of Clp protease and DnaK 99.03
TIGR02031589 BchD-ChlD magnesium chelatase ATPase subunit D. Th 99.02
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 99.02
TIGR00954659 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FA 99.0
TIGR01817534 nifA Nif-specific regulatory protein. This model r 99.0
PRK05707328 DNA polymerase III subunit delta'; Validated 98.99
PLN032321495 ABC transporter C family member; Provisional 98.99
PRK05022509 anaerobic nitric oxide reductase transcription reg 98.98
PRK11608326 pspF phage shock protein operon transcriptional ac 98.98
PRK04132846 replication factor C small subunit; Provisional 98.98
PRK10522547 multidrug transporter membrane component/ATP-bindi 98.97
TIGR02974329 phageshock_pspF psp operon transcriptional activat 98.97
KOG1942456 consensus DNA helicase, TBP-interacting protein [R 98.96
KOG0991333 consensus Replication factor C, subunit RFC2 [Repl 98.96
COG4178604 ABC-type uncharacterized transport system, permeas 98.95
PRK10820520 DNA-binding transcriptional regulator TyrR; Provis 98.94
PLN031301622 ABC transporter C family member; Provisional 98.94
COG0470325 HolB ATPase involved in DNA replication [DNA repli 98.93
PRK11388638 DNA-binding transcriptional regulator DhaR; Provis 98.93
PRK08058329 DNA polymerase III subunit delta'; Validated 98.92
COG1219408 ClpX ATP-dependent protease Clp, ATPase subunit [P 98.92
PF06068398 TIP49: TIP49 C-terminus; InterPro: IPR010339 This 98.92
COG1220444 HslU ATP-dependent protease HslVU (ClpYQ), ATPase 98.91
KOG0741744 consensus AAA+-type ATPase [Posttranslational modi 98.9
PRK15429686 formate hydrogenlyase transcriptional activator Fh 98.89
TIGR012711490 CFTR_protein cystic fibrosis transmembrane conduct 98.85
PRK13765637 ATP-dependent protease Lon; Provisional 98.83
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 98.81
PTZ00111915 DNA replication licensing factor MCM4; Provisional 98.8
KOG1514767 consensus Origin recognition complex, subunit 1, a 98.79
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 98.78
TIGR00957 1522 MRP_assoc_pro multi drug resistance-associated pro 98.78
COG1239423 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolis 98.77
PRK06871325 DNA polymerase III subunit delta'; Validated 98.76
PRK06964342 DNA polymerase III subunit delta'; Validated 98.74
KOG0990360 consensus Replication factor C, subunit RFC5 [Repl 98.72
PF13177162 DNA_pol3_delta2: DNA polymerase III, delta subunit 98.71
PRK07993334 DNA polymerase III subunit delta'; Validated 98.7
COG1116248 TauB ABC-type nitrate/sulfonate/bicarbonate transp 98.69
TIGR02915445 PEP_resp_reg putative PEP-CTERM system response re 98.68
PRK08769319 DNA polymerase III subunit delta'; Validated 98.67
PRK08116268 hypothetical protein; Validated 98.67
PF07726131 AAA_3: ATPase family associated with various cellu 98.67
KOG2227529 consensus Pre-initiation complex, subunit CDC6, AA 98.66
KOG0745564 consensus Putative ATP-dependent Clp-type protease 98.65
PRK12377248 putative replication protein; Provisional 98.64
PRK07952244 DNA replication protein DnaC; Validated 98.6
PRK11361457 acetoacetate metabolism regulatory protein AtoC; P 98.58
PRK06090319 DNA polymerase III subunit delta'; Validated 98.57
COG2884223 FtsE Predicted ATPase involved in cell division [C 98.56
PRK10923469 glnG nitrogen regulation protein NR(I); Provisiona 98.55
PRK08181269 transposase; Validated 98.54
PF01637234 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 98.53
COG1117253 PstB ABC-type phosphate transport system, ATPase c 98.52
TIGR01271 1490 CFTR_protein cystic fibrosis transmembrane conduct 98.51
PRK13406584 bchD magnesium chelatase subunit D; Provisional 98.5
COG1136226 SalX ABC-type antimicrobial peptide transport syst 98.5
PRK15115444 response regulator GlrR; Provisional 98.49
PRK06526254 transposase; Provisional 98.49
COG4619223 ABC-type uncharacterized transport system, ATPase 98.48
COG1126240 GlnQ ABC-type polar amino acid transport system, A 98.47
PRK08939306 primosomal protein DnaI; Reviewed 98.47
PF03969362 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 98.44
COG1484254 DnaC DNA replication protein [DNA replication, rec 98.43
COG1121254 ZnuC ABC-type Mn/Zn transport systems, ATPase comp 98.43
TIGR01818463 ntrC nitrogen regulation protein NR(I). This model 98.43
PRK08699325 DNA polymerase III subunit delta'; Validated 98.42
PRK09183259 transposase/IS protein; Provisional 98.42
KOG2680454 consensus DNA helicase TIP49, TBP-interacting prot 98.4
PF13173128 AAA_14: AAA domain 98.4
KOG0054 1381 consensus Multidrug resistance-associated protein/ 98.39
PRK06835329 DNA replication protein DnaC; Validated 98.39
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 98.38
PF01695178 IstB_IS21: IstB-like ATP binding protein; InterPro 98.36
PF03215519 Rad17: Rad17 cell cycle checkpoint protein 98.35
PTZ00243 1560 ABC transporter; Provisional 98.34
KOG00541381 consensus Multidrug resistance-associated protein/ 98.32
COG1120258 FepC ABC-type cobalamin/Fe3+-siderophores transpor 98.31
KOG1051898 consensus Chaperone HSP104 and related ATP-depende 98.3
PRK10365441 transcriptional regulatory protein ZraR; Provision 98.3
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 98.29
cd03216163 ABC_Carb_Monos_I This family represents the domain 98.28
COG1241682 MCM2 Predicted ATPase involved in replication cont 98.27
COG3267269 ExeA Type II secretory pathway, component ExeA (pr 98.27
smart00763361 AAA_PrkA PrkA AAA domain. This is a family of PrkA 98.26
PF14532138 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 98.26
KOG0480764 consensus DNA replication licensing factor, MCM6 c 98.24
cd01120165 RecA-like_NTPases RecA-like NTPases. This family i 98.22
KOG2035351 consensus Replication factor C, subunit RFC3 [Cell 98.22
COG3842352 PotA ABC-type spermidine/putrescine transport syst 98.21
COG1485367 Predicted ATPase [General function prediction only 98.2
COG3283511 TyrR Transcriptional regulator of aromatic amino a 98.19
cd03238176 ABC_UvrA The excision repair protein UvrA; Nucleot 98.19
PRK06921266 hypothetical protein; Provisional 98.19
COG3284606 AcoR Transcriptional activator of acetoin/glycerol 98.16
PF00493331 MCM: MCM2/3/5 family This family extends the MCM d 98.16
KOG1970634 consensus Checkpoint RAD17-RFC complex, RAD17/RAD2 98.16
cd03221144 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is 98.15
COG1118345 CysA ABC-type sulfate/molybdate transport systems, 98.13
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 98.13
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 98.12
COG1119257 ModF ABC-type molybdenum transport system, ATPase 98.1
PF05729166 NACHT: NACHT domain 98.1
PLN03210 1153 Resistant to P. syringae 6; Provisional 98.08
PF12775272 AAA_7: P-loop containing dynein motor region D3; P 98.08
KOG0482721 consensus DNA replication licensing factor, MCM7 c 98.08
COG3839338 MalK ABC-type sugar transport systems, ATPase comp 98.08
cd03228171 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein 98.06
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 98.06
cd03214180 ABC_Iron-Siderophores_B12_Hemin ABC transporters, 98.05
PF00931287 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is 98.05
cd03230173 ABC_DR_subfamily_A This family of ATP-binding prot 98.05
KOG0478804 consensus DNA replication licensing factor, MCM4 c 98.04
cd03213194 ABCG_EPDR ABCG transporters are involved in eye pi 98.04
PRK13539207 cytochrome c biogenesis protein CcmA; Provisional 98.03
cd03247178 ABCC_cytochrome_bd The CYD subfamily implicated in 98.03
cd03246173 ABCC_Protease_Secretion This family represents the 98.03
PRK07276290 DNA polymerase III subunit delta'; Validated 98.02
TIGR02237209 recomb_radB DNA repair and recombination protein R 98.02
PRK13538204 cytochrome c biogenesis protein CcmA; Provisional 98.02
PRK05917290 DNA polymerase III subunit delta'; Validated 98.02
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 98.02
COG4181228 Predicted ABC-type transport system involved in ly 98.01
cd03232192 ABC_PDR_domain2 The pleiotropic drug resistance-li 98.0
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 98.0
PRK11650356 ugpC glycerol-3-phosphate transporter ATP-binding 98.0
cd03233202 ABC_PDR_domain1 The pleiotropic drug resistance (P 97.99
COG1123539 ATPase components of various ABC-type transport sy 97.99
PRK05818261 DNA polymerase III subunit delta'; Validated 97.98
PRK13541195 cytochrome c biogenesis protein CcmA; Provisional 97.97
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 97.97
TIGR02314343 ABC_MetN D-methionine ABC transporter, ATP-binding 97.96
cd03301213 ABC_MalK_N The N-terminal ATPase domain of the mal 97.96
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 97.95
cd03269210 ABC_putative_ATPase This subfamily is involved in 97.95
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 97.95
COG3840231 ThiQ ABC-type thiamine transport system, ATPase co 97.95
PRK09452375 potA putrescine/spermidine ABC transporter ATPase 97.95
cd03215182 ABC_Carb_Monos_II This family represents domain II 97.94
PRK11432351 fbpC ferric transporter ATP-binding subunit; Provi 97.94
COG1122235 CbiO ABC-type cobalt transport system, ATPase comp 97.93
PRK13543214 cytochrome c biogenesis protein CcmA; Provisional 97.93
cd03217200 ABC_FeS_Assembly ABC-type transport system involve 97.92
TIGR02211221 LolD_lipo_ex lipoprotein releasing system, ATP-bin 97.92
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 97.92
PF12774231 AAA_6: Hydrolytic ATP binding site of dynein motor 97.92
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 97.91
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 97.91
TIGR03410230 urea_trans_UrtE urea ABC transporter, ATP-binding 97.9
cd03218232 ABC_YhbG The ABC transporters belonging to the Yhb 97.9
cd01124187 KaiC KaiC is a circadian clock protein primarily f 97.9
COG4525259 TauB ABC-type taurine transport system, ATPase com 97.9
PRK11607377 potG putrescine transporter ATP-binding subunit; P 97.9
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 97.9
cd03226205 ABC_cobalt_CbiO_domain2 Domain II of the ABC compo 97.89
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 97.89
COG1131293 CcmA ABC-type multidrug transport system, ATPase c 97.89
PRK13540200 cytochrome c biogenesis protein CcmA; Provisional 97.89
cd00267157 ABC_ATPase ABC (ATP-binding cassette) transporter 97.89
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 97.89
TIGR03265353 PhnT2 putative 2-aminoethylphosphonate ABC transpo 97.88
cd03263220 ABC_subfamily_A The ABCA subfamily mediates the tr 97.88
KOG2383467 consensus Predicted ATPase [General function predi 97.88
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 97.88
PRK07132299 DNA polymerase III subunit delta'; Validated 97.87
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 97.87
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 97.87
COG4133209 CcmA ABC-type transport system involved in cytochr 97.86
COG1127263 Ttg2A ABC-type transport system involved in resist 97.86
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 97.86
cd03261235 ABC_Org_Solvent_Resistant ABC (ATP-binding cassett 97.86
PRK11248255 tauB taurine transporter ATP-binding subunit; Prov 97.86
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 97.86
cd03283199 ABC_MutS-like MutS-like homolog in eukaryotes. The 97.86
TIGR01188302 drrA daunorubicin resistance ABC transporter ATP-b 97.86
PRK11000369 maltose/maltodextrin transporter ATP-binding prote 97.85
TIGR01184230 ntrCD nitrate transport ATP-binding subunits C and 97.84
cd03231201 ABC_CcmA_heme_exporter CcmA, the ATP-binding compo 97.84
PRK11153343 metN DL-methionine transporter ATP-binding subunit 97.84
TIGR01618220 phage_P_loop phage nucleotide-binding protein. Thi 97.84
TIGR01189198 ccmA heme ABC exporter, ATP-binding protein CcmA. 97.84
cd03262213 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- 97.83
cd03295242 ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin 97.82
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 97.82
COG1135339 AbcC ABC-type metal ion transport system, ATPase c 97.82
PRK13648269 cbiO cobalt transporter ATP-binding subunit; Provi 97.82
PRK11629233 lolD lipoprotein transporter ATP-binding subunit; 97.82
PRK09544251 znuC high-affinity zinc transporter ATPase; Review 97.81
PRK11247257 ssuB aliphatic sulfonates transport ATP-binding su 97.81
cd03237246 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o 97.8
TIGR01186363 proV glycine betaine/L-proline transport ATP bindi 97.8
COG1618179 Predicted nucleotide kinase [Nucleotide transport 97.8
cd03298211 ABC_ThiQ_thiamine_transporter ABC-type thiamine tr 97.8
PRK14257329 phosphate ABC transporter ATP-binding protein; Pro 97.79
TIGR01257 2272 rim_protein retinal-specific rim ABC transporter. 97.78
cd03220224 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo 97.77
TIGR03740223 galliderm_ABC gallidermin-class lantibiotic protec 97.77
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 97.77
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 97.77
TIGR01288303 nodI ATP-binding ABC transporter family nodulation 97.76
PRK10247225 putative ABC transporter ATP-binding protein YbbL; 97.76
PRK13537306 nodulation ABC transporter NodI; Provisional 97.76
PRK10851353 sulfate/thiosulfate transporter subunit; Provision 97.76
cd03267236 ABC_NatA_like Similar in sequence to NatA, this is 97.76
PRK14250241 phosphate ABC transporter ATP-binding protein; Pro 97.76
PRK13635279 cbiO cobalt transporter ATP-binding subunit; Provi 97.76
PRK08533230 flagellar accessory protein FlaH; Reviewed 97.75
PRK13650279 cbiO cobalt transporter ATP-binding subunit; Provi 97.75
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 97.74
TIGR01277213 thiQ thiamine ABC transporter, ATP-binding protein 97.74
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 97.74
PRK13652277 cbiO cobalt transporter ATP-binding subunit; Provi 97.73
PRK10584228 putative ABC transporter ATP-binding protein YbbA; 97.73
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 97.73
PRK10771232 thiQ thiamine transporter ATP-binding subunit; Pro 97.73
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 97.73
PRK09493240 glnQ glutamine ABC transporter ATP-binding protein 97.73
cd01121372 Sms Sms (bacterial radA) DNA repair protein. This 97.73
PRK13632271 cbiO cobalt transporter ATP-binding subunit; Provi 97.73
PRK10575265 iron-hydroxamate transporter ATP-binding subunit; 97.72
TIGR03258362 PhnT 2-aminoethylphosphonate ABC transport system, 97.72
cd03294269 ABC_Pro_Gly_Bertaine This family comprises the gly 97.72
COG3638258 ABC-type phosphate/phosphonate transport system, A 97.7
PRK10908222 cell division protein FtsE; Provisional 97.7
cd03300232 ABC_PotA_N PotA is an ABC-type transporter and the 97.69
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 97.69
KOG0477854 consensus DNA replication licensing factor, MCM2 c 97.69
cd03264211 ABC_drug_resistance_like ABC-type multidrug transp 97.69
PRK11614237 livF leucine/isoleucine/valine transporter ATP-bin 97.68
PHA00729226 NTP-binding motif containing protein 97.68
TIGR03522301 GldA_ABC_ATP gliding motility-associated ABC trans 97.67
PRK11144352 modC molybdate transporter ATP-binding protein; Pr 97.67
TIGR03005252 ectoine_ehuA ectoine/hydroxyectoine ABC transporte 97.66
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 97.66
PRK10070400 glycine betaine transporter ATP-binding subunit; P 97.66
PRK06067234 flagellar accessory protein FlaH; Validated 97.66
PRK11823446 DNA repair protein RadA; Provisional 97.66
PRK10895241 lipopolysaccharide ABC transporter ATP-binding pro 97.66
PRK09536402 btuD corrinoid ABC transporter ATPase; Reviewed 97.66
PRK11022326 dppD dipeptide transporter ATP-binding subunit; Pr 97.66
PRK13548258 hmuV hemin importer ATP-binding subunit; Provision 97.65
cd03250204 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. 97.65
PF00005137 ABC_tran: ABC transporter This structure is on hol 97.65
PRK11831269 putative ABC transporter ATP-binding protein YrbF; 97.65
KOG2170344 consensus ATPase of the AAA+ superfamily [General 97.64
cd03253236 ABCC_ATM1_transporter ATM1 is an ABC transporter t 97.64
cd03369207 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty 97.64
cd03252237 ABCC_Hemolysin The ABC-transporter hemolysin B is 97.64
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 97.64
PRK11264250 putative amino-acid ABC transporter ATP-binding pr 97.64
cd01128249 rho_factor Transcription termination factor rho is 97.63
PRK10253265 iron-enterobactin transporter ATP-binding protein; 97.63
PRK15112267 antimicrobial peptide ABC system ATP-binding prote 97.63
PRK09361225 radB DNA repair and recombination protein RadB; Pr 97.63
PRK13638271 cbiO cobalt transporter ATP-binding subunit; Provi 97.62
PRK13646286 cbiO cobalt transporter ATP-binding subunit; Provi 97.62
TIGR02012321 tigrfam_recA protein RecA. This model describes or 97.62
TIGR02142354 modC_ABC molybdenum ABC transporter, ATP-binding p 97.62
cd03299235 ABC_ModC_like Archeal protein closely related to M 97.62
TIGR00968237 3a0106s01 sulfate ABC transporter, ATP-binding pro 97.61
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 97.61
PRK13536340 nodulation factor exporter subunit NodI; Provision 97.61
cd03289275 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic 97.6
PRK13546264 teichoic acids export protein ATP-binding subunit; 97.6
PRK13647274 cbiO cobalt transporter ATP-binding subunit; Provi 97.6
PRK13644274 cbiO cobalt transporter ATP-binding subunit; Provi 97.6
PRK13640282 cbiO cobalt transporter ATP-binding subunit; Provi 97.6
cd03249238 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) 97.6
PF00910107 RNA_helicase: RNA helicase; InterPro: IPR000605 He 97.59
cd03248226 ABCC_TAP TAP, the Transporter Associated with Anti 97.59
PRK13642277 cbiO cobalt transporter ATP-binding subunit; Provi 97.59
cd03257228 ABC_NikE_OppD_transporters The ABC transporter sub 97.58
PRK14247250 phosphate ABC transporter ATP-binding protein; Pro 97.58
cd03245220 ABCC_bacteriocin_exporters ABC-type bacteriocin ex 97.58
cd03254229 ABCC_Glucan_exporter_like Glucan exporter ATP-bind 97.58
PRK13637287 cbiO cobalt transporter ATP-binding subunit; Provi 97.58
PTZ00202550 tuzin; Provisional 97.58
PF14516331 AAA_35: AAA-like domain 97.57
PRK13633280 cobalt transporter ATP-binding subunit; Provisiona 97.57
PRK11300255 livG leucine/isoleucine/valine transporter ATP-bin 97.57
KOG0927614 consensus Predicted transporter (ABC superfamily) 97.57
COG4172534 ABC-type uncharacterized transport system, duplica 97.56
PRK13636283 cbiO cobalt transporter ATP-binding subunit; Provi 97.56
TIGR02770230 nickel_nikD nickel import ATP-binding protein NikD 97.56
TIGR02982220 heterocyst_DevA ABC exporter ATP-binding subunit, 97.56
TIGR00767415 rho transcription termination factor Rho. Members 97.56
>KOG0734 consensus AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=4.6e-94  Score=759.00  Aligned_cols=438  Identities=40%  Similarity=0.656  Sum_probs=410.0

Q ss_pred             cCCCCcccccccccHHHHHHHHHHHHHhcChhhhhccCCCCCceEEEEcCCCChHHHHHHHHHHhcCCCEEEeeCchhHH
Q 005611          167 DGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE  246 (688)
Q Consensus       167 ~~~~~v~f~dV~G~~~~k~~L~~ii~~l~~~~~~~~~g~~~~~gvLL~GppGtGKT~La~alA~~~~~~~~~v~~~~~~~  246 (688)
                      ....+++|+||.|+|++|++|+++++++++|..|.++|.+.|+||||+||||||||+||||+|+++++|||+.++++|-+
T Consensus       296 ~~~~nv~F~dVkG~DEAK~ELeEiVefLkdP~kftrLGGKLPKGVLLvGPPGTGKTlLARAvAGEA~VPFF~~sGSEFdE  375 (752)
T KOG0734|consen  296 EQMKNVTFEDVKGVDEAKQELEEIVEFLKDPTKFTRLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYASGSEFDE  375 (752)
T ss_pred             hhhcccccccccChHHHHHHHHHHHHHhcCcHHhhhccCcCCCceEEeCCCCCchhHHHHHhhcccCCCeEeccccchhh
Confidence            34468999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhHHHHHHHHHHHhCCCeEEEEcccchhhhhhcCCccCcchhhhhhhhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005611          247 VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLA  326 (688)
Q Consensus       247 ~~~g~~~~~~r~~f~~A~~~~p~IL~LDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LL~~ld~~~~~~~viVIa  326 (688)
                      +++|.|.+++|++|+.|+.++||||||||||+++.+|...           ......+++||||.+||+|.++.+||||+
T Consensus       376 m~VGvGArRVRdLF~aAk~~APcIIFIDEiDavG~kR~~~-----------~~~y~kqTlNQLLvEmDGF~qNeGiIvig  444 (752)
T KOG0734|consen  376 MFVGVGARRVRDLFAAAKARAPCIIFIDEIDAVGGKRNPS-----------DQHYAKQTLNQLLVEMDGFKQNEGIIVIG  444 (752)
T ss_pred             hhhcccHHHHHHHHHHHHhcCCeEEEEechhhhcccCCcc-----------HHHHHHHHHHHHHHHhcCcCcCCceEEEe
Confidence            9999999999999999999999999999999999988641           22367889999999999999999999999


Q ss_pred             ecCCCCcCCccccCCCccceeeeccCCChhhHHHHHHHHhccCcCCCccCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh
Q 005611          327 ATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRK  406 (688)
Q Consensus       327 aTN~~~~Ld~aL~r~gRf~~~I~i~~Pd~~eR~~Il~~~l~~~~~~~~~dl~~la~~t~G~s~~dL~~lv~~A~~~A~~~  406 (688)
                      +||.|+.||++|.||||||++|.+|.||...|.+||+.|+.++.+..++|+.-||+-|+||||+||+|++|+|+..|..+
T Consensus       445 ATNfpe~LD~AL~RPGRFD~~v~Vp~PDv~GR~eIL~~yl~ki~~~~~VD~~iiARGT~GFsGAdLaNlVNqAAlkAa~d  524 (752)
T KOG0734|consen  445 ATNFPEALDKALTRPGRFDRHVTVPLPDVRGRTEILKLYLSKIPLDEDVDPKIIARGTPGFSGADLANLVNQAALKAAVD  524 (752)
T ss_pred             ccCChhhhhHHhcCCCccceeEecCCCCcccHHHHHHHHHhcCCcccCCCHhHhccCCCCCchHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccHHHHHHHHHhhccCCCccCccccCCcchhHHHHHHHHHHHHHHhhhcccccccccceeeeeeccccCceeEEec
Q 005611          407 GHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHR  486 (688)
Q Consensus       407 ~~~~I~~~di~~Al~~~~~g~~~~~~~~~~~~~~~ia~hE~GhAvv~~~l~~~~~~~~~~v~~vsI~prg~~lg~~~~~~  486 (688)
                      +...+++.|++.|-+++..|+++++..++++.++..||||.|||+++.+....     .|++|+||.|||.+||.+.+.|
T Consensus       525 ga~~VtM~~LE~akDrIlMG~ERks~~i~~eak~~TAyHE~GHAivA~yTk~A-----~PlhKaTImPRG~sLG~t~~LP  599 (752)
T KOG0734|consen  525 GAEMVTMKHLEFAKDRILMGPERKSMVIDEEAKKITAYHEGGHAIVALYTKGA-----MPLHKATIMPRGPSLGHTSQLP  599 (752)
T ss_pred             CcccccHHHHhhhhhheeecccccccccChhhhhhhhhhccCceEEEeecCCC-----ccccceeeccCCccccceeecC
Confidence            99999999999999999999999999999999999999999999999988877     8999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHhhHHHHHHHHhCC--ccCCCCcchHHHHHHHHHHHHHHhcCCccccccCCCCccccccc
Q 005611          487 LDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ--DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK  564 (688)
Q Consensus       487 ~~~~~~~~~t~~~l~~~i~v~LaGraAEei~fG~--~stga~~~Dl~~At~lA~~mv~~~Gm~~~~~~~~g~~~~~~~~~  564 (688)
                      . .+.+..+ |.++++++.||||||+|||++||.  +||||++ ||.+||++|+.||+.||||+++    ||+.+..+..
T Consensus       600 e-~D~~~~T-k~q~LA~lDV~MGGRvAEELIfG~D~iTsGAss-Dl~qAT~lA~~MVt~fGMSd~v----G~v~~~~~~~  672 (752)
T KOG0734|consen  600 E-KDRYSIT-KAQLLARLDVCMGGRVAEELIFGTDKITSGASS-DLDQATKLARRMVTKFGMSDKV----GPVTLSAEDN  672 (752)
T ss_pred             c-cchhhHH-HHHHHHHHHHhhcchHHHHHhccCCcccccccc-hHHHHHHHHHHHHHHcCccccc----cceeeeccCC
Confidence            7 5667776 999999999999999999999995  5889987 9999999999999999999999    9987765431


Q ss_pred             ccCCCcccCCCccCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHh
Q 005611          565 FVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN  644 (688)
Q Consensus       565 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~a~~~a~~lL~~~~~~l~~la~~Lle~e~L~~~ei~~il~  644 (688)
                                         .........+.++.+|.++|+++|+||+.||+.|...+++||++|+++|||+++||+++++
T Consensus       673 -------------------~~s~~~~t~~lidaEi~~lL~~sYeRak~iL~~h~kEl~~LA~ALleYETL~A~eik~vl~  733 (752)
T KOG0734|consen  673 -------------------SSSLSPRTQELIDAEIKRLLRDSYERAKSILKTHKKELHALAEALLEYETLDAKEIKRVLK  733 (752)
T ss_pred             -------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHh
Confidence                               0113333445678899999999999999999999999999999999999999999999998


Q ss_pred             cC
Q 005611          645 NY  646 (688)
Q Consensus       645 ~~  646 (688)
                      ..
T Consensus       734 g~  735 (752)
T KOG0734|consen  734 GK  735 (752)
T ss_pred             cc
Confidence            54

>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0731 consensus AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>CHL00176 ftsH cell division protein; Validated Back     alignment and domain information
>PRK10733 hflB ATP-dependent metalloprotease; Reviewed Back     alignment and domain information
>TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH Back     alignment and domain information
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>CHL00206 ycf2 Ycf2; Provisional Back     alignment and domain information
>KOG0730 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0727 consensus 26S proteasome regulatory complex, ATPase RPT3 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0728 consensus 26S proteasome regulatory complex, ATPase RPT6 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0652 consensus 26S proteasome regulatory complex, ATPase RPT5 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0729 consensus 26S proteasome regulatory complex, ATPase RPT1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0726 consensus 26S proteasome regulatory complex, ATPase RPT2 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>KOG0738 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01434 Peptidase_M41: Peptidase family M41 This is family M41 in the peptidase classification Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>KOG0735 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>KOG0737 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0739 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0651 consensus 26S proteasome regulatory complex, ATPase RPT4 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03689 pup_AAA proteasome ATPase Back     alignment and domain information
>KOG0730 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0741 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>KOG0732 consensus AAA+-type ATPase containing the bromodomain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0740 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0742 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>CHL00181 cbbX CbbX; Provisional Back     alignment and domain information
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>KOG0743 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair Back     alignment and domain information
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit Back     alignment and domain information
>KOG0735 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>TIGR00763 lon ATP-dependent protease La Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14960 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK14958 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>KOG2004 consensus Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] Back     alignment and domain information
>PRK07994 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK08691 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PRK14949 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>PRK14951 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family Back     alignment and domain information
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein Back     alignment and domain information
>PRK12422 chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05563 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07940 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau Back     alignment and domain information
>TIGR01192 chvA glucan exporter ATP-binding protein Back     alignment and domain information
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed Back     alignment and domain information
>PRK10787 DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>PRK14952 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07764 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>PTZ00265 multidrug resistance protein (mdr1); Provisional Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>PRK07133 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>PRK08451 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>KOG0989 consensus Replication factor C, subunit RFC4 [Replication, recombination and repair] Back     alignment and domain information
>PRK14965 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14970 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK14953 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK13407 bchI magnesium chelatase subunit I; Provisional Back     alignment and domain information
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2028 consensus ATPase related to the helicase subunit of the Holliday junction resolvase [Replication, recombination and repair] Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PRK06305 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK06647 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein Back     alignment and domain information
>CHL00081 chlI Mg-protoporyphyrin IX chelatase Back     alignment and domain information
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit Back     alignment and domain information
>TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) Back     alignment and domain information
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family Back     alignment and domain information
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] Back     alignment and domain information
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK14948 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02030 BchI-ChlI magnesium chelatase ATPase subunit I Back     alignment and domain information
>PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PTZ00265 multidrug resistance protein (mdr1); Provisional Back     alignment and domain information
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP) Back     alignment and domain information
>TIGR01650 PD_CobS cobaltochelatase, CobS subunit Back     alignment and domain information
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK14971 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR00368 Mg chelatase-related protein Back     alignment and domain information
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PLN03232 ABC transporter C family member; Provisional Back     alignment and domain information
>PRK13531 regulatory ATPase RavA; Provisional Back     alignment and domain information
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins Back     alignment and domain information
>PLN03130 ABC transporter C family member; Provisional Back     alignment and domain information
>PTZ00243 ABC transporter; Provisional Back     alignment and domain information
>PHA02244 ATPase-like protein Back     alignment and domain information
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>PRK09862 putative ATP-dependent protease; Provisional Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>smart00350 MCM minichromosome maintenance proteins Back     alignment and domain information
>PRK07471 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>PRK05564 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG0714 MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>PRK07399 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR Back     alignment and domain information
>TIGR00764 lon_rel lon-related putative ATP-dependent protease Back     alignment and domain information
>COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01078 Mg_chelatase: Magnesium chelatase, subunit ChlI; InterPro: IPR000523 Magnesium-chelatase is a three-component enzyme that catalyses the insertion of Mg2+ into protoporphyrin IX Back     alignment and domain information
>COG1221 PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>TIGR00602 rad24 checkpoint protein rad24 Back     alignment and domain information
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02031 BchD-ChlD magnesium chelatase ATPase subunit D Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei Back     alignment and domain information
>TIGR01817 nifA Nif-specific regulatory protein Back     alignment and domain information
>PRK05707 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PLN03232 ABC transporter C family member; Provisional Back     alignment and domain information
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional Back     alignment and domain information
>PRK11608 pspF phage shock protein operon transcriptional activator; Provisional Back     alignment and domain information
>PRK04132 replication factor C small subunit; Provisional Back     alignment and domain information
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional Back     alignment and domain information
>TIGR02974 phageshock_pspF psp operon transcriptional activator PspF Back     alignment and domain information
>KOG1942 consensus DNA helicase, TBP-interacting protein [Replication, recombination and repair] Back     alignment and domain information
>KOG0991 consensus Replication factor C, subunit RFC2 [Replication, recombination and repair] Back     alignment and domain information
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] Back     alignment and domain information
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional Back     alignment and domain information
>PLN03130 ABC transporter C family member; Provisional Back     alignment and domain information
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional Back     alignment and domain information
>PRK08058 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins Back     alignment and domain information
>COG1220 HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0741 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional Back     alignment and domain information
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR) Back     alignment and domain information
>PRK13765 ATP-dependent protease Lon; Provisional Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PTZ00111 DNA replication licensing factor MCM4; Provisional Back     alignment and domain information
>KOG1514 consensus Origin recognition complex, subunit 1, and related proteins [Replication, recombination and repair] Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP) Back     alignment and domain information
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] Back     alignment and domain information
>PRK06871 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK06964 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG0990 consensus Replication factor C, subunit RFC5 [Replication, recombination and repair] Back     alignment and domain information
>PF13177 DNA_pol3_delta2: DNA polymerase III, delta subunit; PDB: 1NJF_B 3GLG_G 1XXH_I 1NJG_A 3GLF_B 3GLI_G 1IQP_E 2GNO_A 1SXJ_E 1A5T_A Back     alignment and domain information
>PRK07993 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator Back     alignment and domain information
>PRK08769 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model Back     alignment and domain information
>KOG2227 consensus Pre-initiation complex, subunit CDC6, AAA+ superfamily ATPase [Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0745 consensus Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional Back     alignment and domain information
>PRK06090 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional Back     alignment and domain information
>PRK08181 transposase; Validated Back     alignment and domain information
>PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP Back     alignment and domain information
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR) Back     alignment and domain information
>PRK13406 bchD magnesium chelatase subunit D; Provisional Back     alignment and domain information
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>PRK15115 response regulator GlrR; Provisional Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08939 primosomal protein DnaI; Reviewed Back     alignment and domain information
>PF03969 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 ATPase family gene 1 (AFG1) ATPase is a 377 amino acid putative protein with an ATPase motif typical of the protein family including SEC18p PAS1, CDC48-VCP and TBP Back     alignment and domain information
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] Back     alignment and domain information
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01818 ntrC nitrogen regulation protein NR(I) Back     alignment and domain information
>PRK08699 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK09183 transposase/IS protein; Provisional Back     alignment and domain information
>KOG2680 consensus DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>PF13173 AAA_14: AAA domain Back     alignment and domain information
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK06835 DNA replication protein DnaC; Validated Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif Back     alignment and domain information
>PF03215 Rad17: Rad17 cell cycle checkpoint protein Back     alignment and domain information
>PTZ00243 ABC transporter; Provisional Back     alignment and domain information
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>KOG1051 consensus Chaperone HSP104 and related ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10365 transcriptional regulatory protein ZraR; Provisional Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] Back     alignment and domain information
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] Back     alignment and domain information
>smart00763 AAA_PrkA PrkA AAA domain Back     alignment and domain information
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H Back     alignment and domain information
>KOG0480 consensus DNA replication licensing factor, MCM6 component [Replication, recombination and repair] Back     alignment and domain information
>cd01120 RecA-like_NTPases RecA-like NTPases Back     alignment and domain information
>KOG2035 consensus Replication factor C, subunit RFC3 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>COG1485 Predicted ATPase [General function prediction only] Back     alignment and domain information
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] Back     alignment and domain information
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>PRK06921 hypothetical protein; Provisional Back     alignment and domain information
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] Back     alignment and domain information
>PF00493 MCM: MCM2/3/5 family This family extends the MCM domain of Prosite Back     alignment and domain information
>KOG1970 consensus Checkpoint RAD17-RFC complex, RAD17/RAD24 component [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth Back     alignment and domain information
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>PLN03210 Resistant to P Back     alignment and domain information
>PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A Back     alignment and domain information
>KOG0482 consensus DNA replication licensing factor, MCM7 component [Replication, recombination and repair] Back     alignment and domain information
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea Back     alignment and domain information
>PF00931 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is the NB-ARC domain, a novel signalling motif found in bacteria and eukaryotes, shared by plant resistance gene products and regulators of cell death in animals [] Back     alignment and domain information
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity Back     alignment and domain information
>KOG0478 consensus DNA replication licensing factor, MCM4 component [Replication, recombination and repair] Back     alignment and domain information
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) Back     alignment and domain information
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis Back     alignment and domain information
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain Back     alignment and domain information
>PRK07276 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02237 recomb_radB DNA repair and recombination protein RadB Back     alignment and domain information
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK05917 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK05818 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] Back     alignment and domain information
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed Back     alignment and domain information
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component Back     alignment and domain information
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE Back     alignment and domain information
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids Back     alignment and domain information
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs Back     alignment and domain information
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds Back     alignment and domain information
>KOG2383 consensus Predicted ATPase [General function prediction only] Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>PRK07132 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>cd03283 ABC_MutS-like MutS-like homolog in eukaryotes Back     alignment and domain information
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit Back     alignment and domain information
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D Back     alignment and domain information
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter Back     alignment and domain information
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01618 phage_P_loop phage nucleotide-binding protein Back     alignment and domain information
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA Back     alignment and domain information
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively Back     alignment and domain information
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed Back     alignment and domain information
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional Back     alignment and domain information
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor Back     alignment and domain information
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit Back     alignment and domain information
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP Back     alignment and domain information
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01257 rim_protein retinal-specific rim ABC transporter Back     alignment and domain information
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export Back     alignment and domain information
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI Back     alignment and domain information
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional Back     alignment and domain information
>PRK13537 nodulation ABC transporter NodI; Provisional Back     alignment and domain information
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional Back     alignment and domain information
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake Back     alignment and domain information
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK08533 flagellar accessory protein FlaH; Reviewed Back     alignment and domain information
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>cd01121 Sms Sms (bacterial radA) DNA repair protein Back     alignment and domain information
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT Back     alignment and domain information
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea Back     alignment and domain information
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10908 cell division protein FtsE; Provisional Back     alignment and domain information
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>KOG0477 consensus DNA replication licensing factor, MCM2 component [Replication, recombination and repair] Back     alignment and domain information
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component Back     alignment and domain information
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PHA00729 NTP-binding motif containing protein Back     alignment and domain information
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA Back     alignment and domain information
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK06067 flagellar accessory protein FlaH; Validated Back     alignment and domain information
>PRK11823 DNA repair protein RadA; Provisional Back     alignment and domain information
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed Back     alignment and domain information
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C Back     alignment and domain information
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems Back     alignment and domain information
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional Back     alignment and domain information
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only] Back     alignment and domain information
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria Back     alignment and domain information
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) Back     alignment and domain information
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional Back     alignment and domain information
>cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase Back     alignment and domain information
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional Back     alignment and domain information
>PRK09361 radB DNA repair and recombination protein RadB; Provisional Back     alignment and domain information
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02012 tigrfam_recA protein RecA Back     alignment and domain information
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03299 ABC_ModC_like Archeal protein closely related to ModC Back     alignment and domain information
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>PRK13536 nodulation factor exporter subunit NodI; Provisional Back     alignment and domain information
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 Back     alignment and domain information
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 Back     alignment and domain information
>PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) Back     alignment and domain information
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules Back     alignment and domain information
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) Back     alignment and domain information
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters Back     alignment and domain information
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein Back     alignment and domain information
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PTZ00202 tuzin; Provisional Back     alignment and domain information
>PF14516 AAA_35: AAA-like domain Back     alignment and domain information
>PRK13633 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only] Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD Back     alignment and domain information
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family Back     alignment and domain information
>TIGR00767 rho transcription termination factor Rho Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
2ce7_A476 Edta Treated Length = 476 2e-75
3kds_E465 Apo-ftsh Crystal Structure Length = 465 8e-75
2dhr_A499 Whole Cytosolic Region Of Atp-Dependent Metalloprot 6e-69
4eiw_A508 Whole Cytosolic Region Of Atp-Dependent Metalloprot 6e-69
1lv7_A257 Crystal Structure Of The Aaa Domain Of Ftsh Length 8e-54
1iy2_A278 Crystal Structure Of The Ftsh Atpase Domain From Th 4e-51
2r62_A268 Crystal Structure Of Helicobacter Pylori Atp Depend 2e-50
1ixz_A254 Crystal Structure Of The Ftsh Atpase Domain From Th 4e-50
2qz4_A262 Human Paraplegin, Aaa Domain In Complex With Adp Le 9e-50
3h4m_A285 Aaa Atpase Domain Of The Proteasome- Activating Nuc 2e-46
4b4t_L437 Near-Atomic Resolution Structural Model Of The Yeas 2e-37
1r7r_A 816 The Crystal Structure Of Murine P97VCP AT 3.6A Leng 2e-36
1e32_A458 Structure Of The N-Terminal Domain And The D1 Aaa D 2e-36
3hu3_A489 Structure Of P97 N-D1 R155h Mutant In Complex With 3e-36
3hu2_A489 Structure Of P97 N-D1 R86a Mutant In Complex With A 3e-36
3cf1_A806 Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX Len 3e-36
3hu1_A489 Structure Of P97 N-D1 R95g Mutant In Complex With A 3e-36
4b4t_I437 Near-Atomic Resolution Structural Model Of The Yeas 2e-35
4b4t_J405 Near-Atomic Resolution Structural Model Of The Yeas 1e-34
4b4t_M434 Near-Atomic Resolution Structural Model Of The Yeas 8e-34
3cf0_A301 Structure Of D2 Subdomain Of P97VCP IN COMPLEX WITH 5e-32
4b4t_K428 Near-Atomic Resolution Structural Model Of The Yeas 6e-32
4b4t_H467 Near-Atomic Resolution Structural Model Of The Yeas 1e-31
2x8a_A274 Human Nuclear Valosin Containing Protein Like (Nvl) 1e-28
2rko_A331 Crystal Structure Of The Vps4p-Dimer Length = 331 5e-23
3eie_A322 Crystal Structure Of S.Cerevisiae Vps4 In The So4-B 1e-22
3eih_A340 Crystal Structure Of S.Cerevisiae Vps4 In The Prese 1e-22
2qp9_X355 Crystal Structure Of S.Cerevisiae Vps4 Length = 355 2e-22
3vfd_A389 Human Spastin Aaa Domain Length = 389 1e-21
2zam_A444 Crystal Structure Of Mouse Skd1VPS4B APO-Form Lengt 6e-21
1xwi_A322 Crystal Structure Of Vps4b Length = 322 2e-20
3d8b_A357 Crystal Structure Of Human Fidgetin-Like Protein 1 2e-19
3b9p_A297 Spastin Length = 297 9e-19
2di4_A238 Crystal Structure Of The Ftsh Protease Domain Lengt 2e-07
1ofh_A310 Asymmetric Complex Between Hslv And I-domain Delete 1e-05
3m6a_A543 Crystal Structure Of Bacillus Subtilis Lon C-Termin 2e-04
3pvs_A447 Structure And Biochemical Activities Of Escherichia 3e-04
2c9o_A456 3d Structure Of The Human Ruvb-Like Helicase Ruvbl1 7e-04
>pdb|2CE7|A Chain A, Edta Treated Length = 476 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (716), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/477 (35%), Positives = 265/477 (55%), Gaps = 28/477 (5%)
Query: 168 GSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKA 227
           G+  V F DV G +EA+EEL+E+V +LK+P  F+++G + P G+LL GPPG GKTL+A+A
Sbjct: 9   GNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARA 68
Query: 228 IAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIF 287
           +AGEA VPF+ ++GS+FVE+ VGVG+AR+RDLF +AK + P ++FIDEIDA+   R    
Sbjct: 69  VAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGL 128
Query: 288 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRK 347
               D        ERE TLNQLL+E+DGFD+ +G+I +AATN              FD+K
Sbjct: 129 GGGHD--------EREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKK 180
Query: 348 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKG 407
           I +  P+  GR +IL+IH     +++ V+L   AK  PG+ G                +G
Sbjct: 181 IVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREG 240
Query: 408 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 467
            + I   D ++A+DR+  GP R+ + +    +   A  E G A++S ++        E  
Sbjct: 241 RDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVV-----PNGEPV 295
Query: 468 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASV 527
            RISI+PRG        H  +++ Y+  R  +LL +L  LLGGRAAEEV++G  TS A+ 
Sbjct: 296 HRISIIPRGYKALGYTLHLPEEDKYLVSRN-ELLDKLTALLGGRAAEEVVFGDVTSGAA- 353
Query: 528 NYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPV 587
           N +  A+ +AR ++    +   +     P  W K+ + V     F G            V
Sbjct: 354 NDIERATEIARNMVCQLGMSEEL----GPLAWGKEEQEV-----FLGKEITRLRNYSEEV 404
Query: 588 NFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 644
              +D+++    ++++ + Y R   ++R++   L   V++LL ++ I  +E+  IL+
Sbjct: 405 ASKIDEEV----KKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS 457
>pdb|3KDS|E Chain E, Apo-ftsh Crystal Structure Length = 465 Back     alignment and structure
>pdb|2DHR|A Chain A, Whole Cytosolic Region Of Atp-Dependent Metalloprotease Ftsh (G399l) Length = 499 Back     alignment and structure
>pdb|4EIW|A Chain A, Whole Cytosolic Region Of Atp-Dependent Metalloprotease Ftsh (G399l) Length = 508 Back     alignment and structure
>pdb|1LV7|A Chain A, Crystal Structure Of The Aaa Domain Of Ftsh Length = 257 Back     alignment and structure
>pdb|1IY2|A Chain A, Crystal Structure Of The Ftsh Atpase Domain From Thermus Thermophilus Length = 278 Back     alignment and structure
>pdb|2R62|A Chain A, Crystal Structure Of Helicobacter Pylori Atp Dependent Protease, Ftsh Length = 268 Back     alignment and structure
>pdb|1IXZ|A Chain A, Crystal Structure Of The Ftsh Atpase Domain From Thermus Thermophilus Length = 254 Back     alignment and structure
>pdb|2QZ4|A Chain A, Human Paraplegin, Aaa Domain In Complex With Adp Length = 262 Back     alignment and structure
>pdb|3H4M|A Chain A, Aaa Atpase Domain Of The Proteasome- Activating Nucleotidase Length = 285 Back     alignment and structure
>pdb|4B4T|L Chain L, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 437 Back     alignment and structure
>pdb|1R7R|A Chain A, The Crystal Structure Of Murine P97VCP AT 3.6A Length = 816 Back     alignment and structure
>pdb|1E32|A Chain A, Structure Of The N-Terminal Domain And The D1 Aaa Domain Of Membrane Fusion Atpase P97 Length = 458 Back     alignment and structure
>pdb|3HU3|A Chain A, Structure Of P97 N-D1 R155h Mutant In Complex With Atpgs Length = 489 Back     alignment and structure
>pdb|3HU2|A Chain A, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs Length = 489 Back     alignment and structure
>pdb|3CF1|A Chain A, Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX Length = 806 Back     alignment and structure
>pdb|3HU1|A Chain A, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs Length = 489 Back     alignment and structure
>pdb|4B4T|I Chain I, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 437 Back     alignment and structure
>pdb|4B4T|J Chain J, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 405 Back     alignment and structure
>pdb|4B4T|M Chain M, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 434 Back     alignment and structure
>pdb|3CF0|A Chain A, Structure Of D2 Subdomain Of P97VCP IN COMPLEX WITH ADP Length = 301 Back     alignment and structure
>pdb|4B4T|K Chain K, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 428 Back     alignment and structure
>pdb|4B4T|H Chain H, Near-Atomic Resolution Structural Model Of The Yeast 26s Proteasome Length = 467 Back     alignment and structure
>pdb|2X8A|A Chain A, Human Nuclear Valosin Containing Protein Like (Nvl), C- Terminal Aaa-Atpase Domain Length = 274 Back     alignment and structure
>pdb|2RKO|A Chain A, Crystal Structure Of The Vps4p-Dimer Length = 331 Back     alignment and structure
>pdb|3EIE|A Chain A, Crystal Structure Of S.Cerevisiae Vps4 In The So4-Bound State Length = 322 Back     alignment and structure
>pdb|3EIH|A Chain A, Crystal Structure Of S.Cerevisiae Vps4 In The Presence Of Atpgammas Length = 340 Back     alignment and structure
>pdb|2QP9|X Chain X, Crystal Structure Of S.Cerevisiae Vps4 Length = 355 Back     alignment and structure
>pdb|3VFD|A Chain A, Human Spastin Aaa Domain Length = 389 Back     alignment and structure
>pdb|2ZAM|A Chain A, Crystal Structure Of Mouse Skd1VPS4B APO-Form Length = 444 Back     alignment and structure
>pdb|1XWI|A Chain A, Crystal Structure Of Vps4b Length = 322 Back     alignment and structure
>pdb|3D8B|A Chain A, Crystal Structure Of Human Fidgetin-Like Protein 1 In Complex With Adp Length = 357 Back     alignment and structure
>pdb|3B9P|A Chain A, Spastin Length = 297 Back     alignment and structure
>pdb|2DI4|A Chain A, Crystal Structure Of The Ftsh Protease Domain Length = 238 Back     alignment and structure
>pdb|1OFH|A Chain A, Asymmetric Complex Between Hslv And I-domain Deleted Hslu (h. Influenzae) Length = 310 Back     alignment and structure
>pdb|3M6A|A Chain A, Crystal Structure Of Bacillus Subtilis Lon C-Terminal Domain Length = 543 Back     alignment and structure
>pdb|3PVS|A Chain A, Structure And Biochemical Activities Of Escherichia Coli Mgsa Length = 447 Back     alignment and structure
>pdb|2C9O|A Chain A, 3d Structure Of The Human Ruvb-Like Helicase Ruvbl1 Length = 456 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
2dhr_A499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 1e-146
2ce7_A476 Cell division protein FTSH; metalloprotease; HET: 1e-144
2r62_A268 Cell division protease FTSH homolog; ATPase domain 1e-122
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 1e-122
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 1e-118
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 1e-116
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 1e-116
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 2e-97
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 5e-89
3hu3_A489 Transitional endoplasmic reticulum ATPase; VCP, tr 4e-88
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 3e-85
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 2e-83
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 3e-70
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 2e-67
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 6e-66
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 8e-65
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 1e-64
3vfd_A389 Spastin; ATPase, microtubule severing, hydrolase; 1e-63
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 2e-63
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 8e-60
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 2e-59
2zan_A444 Vacuolar protein sorting-associating protein 4B; S 5e-59
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 4e-23
3vlf_B88 26S protease regulatory subunit 7 homolog; heat re 9e-23
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 1e-21
2krk_A86 26S protease regulatory subunit 8; structural geno 1e-20
3kw6_A78 26S protease regulatory subunit 8; structural geno 2e-19
3aji_B83 S6C, proteasome (prosome, macropain) 26S subunit, 2e-17
2dzn_B82 26S protease regulatory subunit 6B homolog; ankyri 2e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-14
2di4_A238 Zinc protease, cell division protein FTSH homolog; 7e-12
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 2e-09
3pvs_A447 Replication-associated recombination protein A; ma 8e-09
1sxj_A516 Activator 1 95 kDa subunit; clamp loader, processi 2e-08
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 7e-08
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 5e-06
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 5e-06
2chg_A226 Replication factor C small subunit; DNA-binding pr 8e-06
2chq_A319 Replication factor C small subunit; DNA-binding pr 1e-05
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 1e-05
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 2e-05
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 3e-05
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 6e-05
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 8e-05
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 4e-04
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 5e-04
2v1u_A387 Cell division control protein 6 homolog; DNA repli 6e-04
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 6e-04
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 7e-04
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 8e-04
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Length = 499 Back     alignment and structure
 Score =  433 bits (1115), Expect = e-146
 Identities = 197/521 (37%), Positives = 287/521 (55%), Gaps = 52/521 (9%)

Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
           F++S+A    +    V F DVAG +EA EEL+E+V +LKNP  F +MG + P GVLL GP
Sbjct: 14  FTKSRARVLTEAPK-VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGP 72

Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
           PG GKT +A+A+AGEA VPF   +GS+FVE+ VGVG+AR+RDLF+ AK + P ++FIDEI
Sbjct: 73  PGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEI 132

Query: 277 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 336
           DA+  +R        D        ERE TLNQLL+E+DGF+    ++ +AATNR D+LDP
Sbjct: 133 DAVGRKRGSGVGGGND--------EREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDP 184

Query: 337 ALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLV 396
           ALLRPGRFDR+I I AP+ KGR +IL+IHA    +++ VDL+  AK  PG+ GA L  L+
Sbjct: 185 ALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLL 244

Query: 397 QEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLL 456
            EAAL+A R+G   I   D+++A DR+ + P ++ + L  + +   A  E G A+ +H L
Sbjct: 245 NEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFL 304

Query: 457 RRYENAKVECCD---RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
                   E  D   +++IVPRG+ L   +  R +D  +    R +LL ++ V L GRAA
Sbjct: 305 --------EHADGVHKVTIVPRGRALG-FMMPRREDMLHW--SRKRLLDQIAVALAGRAA 353

Query: 514 EEVIYGQDTSRASVNYLADASWLARKILTIWNLEN---PMVI---HGEPPPWRKKVKFVG 567
           EE+++   T+ A  N    A+ LAR+++T W +     P+                    
Sbjct: 354 EEIVFDDVTTGAE-NDFRQATELARRMITEWGMHPEFGPVAYAVREDTY----------- 401

Query: 568 PRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKV 627
                 G     Y          +D+ +      L+ + Y R   LL      L +  + 
Sbjct: 402 ----LGGYDVRQYS---EETAKRIDEAV----RRLIEEQYQRVKALLLEKREVLERVAET 450

Query: 628 LLNQKEIGREEIDFILNNYPPQTPISRLLEEENPGTLPFIK 668
           LL ++ +  EE   ++   P + P     E E P  +P +K
Sbjct: 451 LLERETLTAEEFQRVVEGLPLEAPEEAREEREPPRVVPKVK 491
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Length = 476 Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Length = 268 Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Length = 262 Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Length = 257 Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Length = 278 Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Length = 254 Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Length = 285 Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Length = 301 Back     alignment and structure
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* 2pjh_B Length = 489 Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Length = 274 Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Length = 322 Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Length = 297 Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Length = 357 Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Length = 322 Back     alignment and structure
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} Length = 389 Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Length = 355 Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Length = 293 Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Length = 272 Back     alignment and structure
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A Length = 444 Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Length = 456 Back     alignment and structure
>3vlf_B 26S protease regulatory subunit 7 homolog; heat repeat, chaperone, chaperone-protein binding complex; HET: DNA; 3.80A {Saccharomyces cerevisiae} PDB: 4a3v_B* Length = 88 Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Length = 309 Back     alignment and structure
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens} Length = 86 Back     alignment and structure
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens} Length = 78 Back     alignment and structure
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B* Length = 83 Back     alignment and structure
>2dzn_B 26S protease regulatory subunit 6B homolog; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} PDB: 2dzo_B Length = 82 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1 Length = 238 Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Length = 412 Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Length = 447 Back     alignment and structure
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Length = 516 Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Length = 389 Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Length = 324 Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Length = 384 Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Length = 226 Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Length = 319 Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Length = 310 Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Length = 386 Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Length = 327 Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Length = 323 Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Length = 340 Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Length = 368 Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Length = 191 Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Length = 387 Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} PDB: 2axp_A* Length = 173 Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Length = 193 Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Length = 202 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 688
d1lv7a_256 c.37.1.20 (A:) AAA domain of cell division protein 2e-97
d1ixza_247 c.37.1.20 (A:) AAA domain of cell division protein 4e-94
d1r7ra3265 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p 1e-66
d1w44a_321 c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [Ta 2e-59
d1e32a2258 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p 2e-53
d1gvnb_273 c.37.1.21 (B:) Plasmid maintenance system epsilon/ 3e-40
d1svma_362 c.37.1.20 (A:) Papillomavirus large T antigen heli 1e-39
d1d2na_246 c.37.1.20 (A:) Hexamerization domain of N-ethylmal 5e-34
d1ixsb2239 c.37.1.20 (B:4-242) Holliday junction helicase Ruv 3e-28
d1fnna2276 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrob 1e-21
d1ofha_309 c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId 9e-21
d1in4a2238 c.37.1.20 (A:17-254) Holliday junction helicase Ru 7e-18
d2di4a1202 a.269.1.1 (A:406-607) Cell division protein FtsH, 1e-16
d2ce7a1193 a.269.1.1 (A:411-603) Cell division protein FtsH, 2e-16
d1w5sa2287 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-t 3e-12
d1sxja2253 c.37.1.20 (A:295-547) Replication factor C1 {Baker 1e-09
d1g41a_443 c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId 3e-09
d1njfa_239 c.37.1.20 (A:) delta prime subunit of DNA polymera 5e-08
d1zp6a1176 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 { 8e-06
d1g8pa_333 c.37.1.20 (A:) ATPase subunit of magnesium chelata 8e-05
d1sxje2252 c.37.1.20 (E:4-255) Replication factor C5 {Baker's 1e-04
d1qvra3315 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus 8e-04
d1ny5a2247 c.37.1.20 (A:138-384) Transcriptional activator si 0.001
d1a5ta2207 c.37.1.20 (A:1-207) delta prime subunit of DNA pol 0.001
d1knqa_171 c.37.1.17 (A:) Gluconate kinase {Escherichia coli 0.002
d1sxjd2237 c.37.1.20 (D:26-262) Replication factor C2 {Baker' 0.002
d1rkba_173 c.37.1.1 (A:) Adenylate kinase {Human (Homo sapien 0.003
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Length = 256 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: AAA domain of cell division protein FtsH
species: Escherichia coli [TaxId: 562]

 Score =  298 bits (764), Expect = 2e-97
 Identities = 128/255 (50%), Positives = 177/255 (69%), Gaps = 8/255 (3%)

Query: 172 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 231
             F+DVAG DEA EE+ ELV YL+ P  F K+G K P GVL+ GPPG GKTL+AKAIAGE
Sbjct: 9   TTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68

Query: 232 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 291
           A VPF+ ++GS+FVE+ VGVG++R+RD+F++AK   P +IFIDEIDA+  +R        
Sbjct: 69  AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR-------- 120

Query: 292 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 351
                    ERE TLNQ+L+E+DGF+  +G+I +AATNR D+LDPALLRPGRFDR++ + 
Sbjct: 121 GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVG 180

Query: 352 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 411
            P+ +GR +ILK+H  +V ++  +D +  A+  PG++GA LA LV EAAL A R     +
Sbjct: 181 LPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVV 240

Query: 412 LSSDMDDAVDRLTVG 426
              + + A D++ +G
Sbjct: 241 SMVEFEKAKDKIMMG 255
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Length = 247 Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Length = 265 Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Length = 321 Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Length = 258 Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Length = 273 Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Length = 362 Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Length = 246 Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Length = 239 Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 276 Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Length = 309 Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Length = 238 Back     information, alignment and structure
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Length = 202 Back     information, alignment and structure
>d2ce7a1 a.269.1.1 (A:411-603) Cell division protein FtsH, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 193 Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Length = 287 Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 253 Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Length = 443 Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Length = 239 Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Length = 176 Back     information, alignment and structure
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Length = 333 Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 252 Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Length = 315 Back     information, alignment and structure
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Length = 247 Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Length = 207 Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Length = 171 Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237 Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Length = 173 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query688
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 100.0
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 100.0
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 100.0
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 100.0
d2ce7a1193 Cell division protein FtsH, C-terminal domain {The 100.0
d2di4a1202 Cell division protein FtsH, C-terminal domain {Aqu 100.0
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 99.97
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 99.95
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 99.94
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 99.93
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 99.93
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 99.82
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 99.82
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 99.82
d1svma_362 Papillomavirus large T antigen helicase domain {Si 99.82
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 99.82
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 99.82
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 99.81
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 99.77
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 99.77
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 99.76
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 99.76
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 99.75
d1qvra2387 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 99.67
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 99.66
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 99.62
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 99.62
d1qvra3315 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 99.6
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 99.55
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 99.55
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 99.53
d1ny5a2247 Transcriptional activator sigm54 (NtrC1), C-termin 99.43
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 99.23
d2hyda1255 Putative multidrug export ATP-binding/permease pro 99.22
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 99.2
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 99.16
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 99.15
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 99.14
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 99.13
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 99.07
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 98.87
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 98.8
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 98.79
d2awna2232 Maltose transport protein MalK, N-terminal domain 98.78
d1g2912240 Maltose transport protein MalK, N-terminal domain 98.74
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 98.73
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 98.72
d1oxxk2242 Glucose transport protein GlcV, N-terminal domain 98.7
d2a5yb3277 CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI 98.67
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 98.63
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 98.54
d1ji0a_240 Branched chain aminoacid ABC transporter {Thermoto 98.52
d1vpla_238 Putative ABC transporter TM0544 {Thermotoga mariti 98.5
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 98.5
d1g6ha_254 MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 98.49
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 98.4
d1l7vc_231 ABC transporter involved in vitamin B12 uptake, Bt 98.23
d1tf7a2242 Circadian clock protein KaiC {Synechococcus sp. st 98.07
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 98.02
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 97.98
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 97.94
d2qy9a2211 GTPase domain of the signal recognition particle r 97.93
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 97.93
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 97.92
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 97.77
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 97.75
d1okkd2207 GTPase domain of the signal recognition particle r 97.75
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 97.72
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 97.68
d1xp8a1268 RecA protein, ATPase-domain {Deinococcus radiodura 97.66
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 97.66
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 97.62
d1u94a1263 RecA protein, ATPase-domain {Escherichia coli [Tax 97.61
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 97.61
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 97.6
d1j8yf2211 GTPase domain of the signal sequence recognition p 97.59
d1cr2a_277 Gene 4 protein (g4p, DNA primase), helicase domain 97.57
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 97.56
d1vmaa2213 GTPase domain of the signal recognition particle r 97.56
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 97.55
d1tf7a1242 Circadian clock protein KaiC {Synechococcus sp. st 97.53
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 97.49
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 97.46
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 97.43
d1a1va1136 HCV helicase domain {Human hepatitis C virus (HCV) 97.41
d1ls1a2207 GTPase domain of the signal sequence recognition p 97.4
d1mo6a1269 RecA protein, ATPase-domain {Mycobacterium tubercu 97.38
d1w36d1359 Exodeoxyribonuclease V alpha chain (RecD) {Escheri 97.38
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 97.38
d1nlfa_274 Hexameric replicative helicase repA {Escherichia c 97.36
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 97.35
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 97.35
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 97.34
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 97.34
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 97.34
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 97.32
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 97.32
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 97.32
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 97.31
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 97.31
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 97.28
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 97.18
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 97.18
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 97.15
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 97.13
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 96.85
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 96.79
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 96.72
d2fz4a1206 DNA repair protein RAD25 {Archaeoglobus fulgidus [ 96.67
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 96.67
d1odfa_286 Hypothetical protein Ygr205W {Baker's yeast (Sacch 96.65
d2fh5b1207 Signal recognition particle receptor beta-subunit 96.64
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 96.62
d1yksa1140 YFV helicase domain {Yellow fever virus [TaxId: 11 96.52
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 96.5
d2p67a1327 LAO/AO transport system kinase ArgK {Escherichia c 96.49
d1v5wa_258 Meiotic recombination protein DMC1/LIM15 homolog { 96.47
d1s2ma1206 Putative ATP-dependent RNA helicase DHH1 {Baker's 96.47
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 96.47
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 96.45
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 96.44
d1szpa2251 DNA repair protein Rad51, catalytic domain {Baker' 96.44
d1pzna2254 DNA repair protein Rad51, catalytic domain {Archae 96.4
d2j0sa1222 Probable ATP-dependent RNA helicase DDX48 {Human ( 96.4
d2bv3a2276 Elongation factor G (EF-G), N-terminal (G) domain 96.36
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 96.27
d1h65a_257 Chloroplast protein translocon GTPase Toc34 {Garde 96.24
d2gj8a1161 Probable tRNA modification GTPase TrmE (MnmE), G d 96.24
d2p6ra3202 Hel308 helicase {Archaeoglobus fulgidus [TaxId: 22 96.23
d1wb9a2234 DNA repair protein MutS, the C-terminal domain {Es 96.22
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 96.17
d2g9na1218 Initiation factor 4a {Human (Homo sapiens) [TaxId: 96.14
d1wf3a1178 GTPase Era, N-terminal domain {Thermus thermophilu 96.12
d1xpua3289 Transcription termination factor Rho, ATPase domai 96.12
d1qdea_212 Initiation factor 4a {Baker's yeast (Saccharomyces 96.11
d2qm8a1323 Metallochaperone MeaB {Methylobacterium extorquens 96.11
d1nrjb_209 Signal recognition particle receptor beta-subunit 95.98
d1hv8a1208 Putative DEAD box RNA helicase {Archaeon Methanoco 95.96
d1veca_206 DEAD box RNA helicase rck/p54 {Human (Homo sapiens 95.88
d2i1qa2258 DNA repair protein Rad51, catalytic domain {Archae 95.79
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 95.79
d1mkya1171 Probable GTPase Der, N-terminal and middle domains 95.76
d1r8sa_160 ADP-ribosylation factor {Human (Homo sapiens), ARF 95.7
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 95.64
d1htwa_158 Hypothetical protein HI0065 {Haemophilus influenza 95.62
d1u0ja_267 Rep 40 protein helicase domain {Adeno-associated v 95.6
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 95.54
d1tuea_205 Replication protein E1 helicase domain {Human papi 95.51
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 95.49
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 95.48
d1zd9a1164 ADP-ribosylation factor {Human (Homo sapiens), ARL 95.43
d2bmfa2305 Dengue virus helicase {Dengue virus type 2 [TaxId: 95.38
d1gkub1237 Helicase-like "domain" of reverse gyrase {Archaeon 95.31
d1q0ua_209 Probable DEAD box RNA helicase YqfR {Bacillus stea 95.24
d1ewqa2224 DNA repair protein MutS, the C-terminal domain {Th 95.22
d1gm5a3264 RecG helicase domain {Thermotoga maritima [TaxId: 95.12
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 95.12
d2f7sa1186 Rab27b {Human (Homo sapiens) [TaxId: 9606]} 95.11
d1wp9a1200 putative ATP-dependent RNA helicase PF2015 {Pyroco 95.04
d1fzqa_176 ADP-ribosylation factor {Mouse (Mus musculus), ARL 95.04
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 95.01
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 94.98
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 94.93
d1pjra1318 DEXX box DNA helicase {Bacillus stearothermophilus 94.86
d1t6na_207 Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo 94.81
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 94.8
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 94.73
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 94.65
d1ctqa_166 cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 94.46
d2ocpa1241 Deoxyguanosine kinase {Human (Homo sapiens) [TaxId 94.45
d2gjsa1168 Rad {Human (Homo sapiens) [TaxId: 9606]} 94.43
d1uaaa1306 DEXX box DNA helicase {Escherichia coli, RepD [Tax 94.28
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 94.27
d1tmka_214 Thymidylate kinase {Baker's yeast (Saccharomyces c 94.24
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 94.22
d1x3sa1177 Rab18 {Human (Homo sapiens) [TaxId: 9606]} 94.17
d1u0la2225 Probable GTPase EngC (YjeQ), C-terminal domain {Th 94.17
d1e0sa_173 ADP-ribosylation factor {Human (Homo sapiens), ARF 94.04
d1zj6a1177 ADP-ribosylation factor {Human (Homo sapiens), ARL 93.96
d1f6ba_186 SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 93.88
d1kaoa_167 Rap2a {Human (Homo sapiens) [TaxId: 9606]} 93.85
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 93.71
d2qtvb1166 SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta 93.64
d1deka_241 Deoxynucleoside monophosphate kinase {Bacteriophag 93.63
d1u8za_168 Ras-related protein RalA {Cotton-top tamarin (Sagu 93.55
d1e9ra_433 Bacterial conjugative coupling protein TrwB {Esche 93.48
d1upta_169 ADP-ribosylation factor {Human (Homo sapiens), ARL 93.48
d2cxxa1184 GTP-binding protein engB {Pyrococcus horikoshii [T 93.38
d2a5ja1173 Rab2b {Human (Homo sapiens) [TaxId: 9606]} 93.1
d1svia_195 Probable GTPase EngB {Bacillus subtilis [TaxId: 14 93.02
d1ksha_165 ADP-ribosylation factor {Mouse (Mus musculus), ARL 92.91
d1p6xa_333 Thymidine kinase {Equine herpesvirus type 4 [TaxId 92.76
d1p5zb_241 Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 92.72
d1z2aa1164 Rab23 {Mouse (Mus musculus) [TaxId: 10090]} 92.65
d3raba_169 Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} 92.6
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 92.54
d2f9la1175 Rab11b {Human (Homo sapiens) [TaxId: 9606]} 92.38
d2fn4a1173 r-Ras {Human (Homo sapiens) [TaxId: 9606]} 92.3
d1z0fa1166 Rab14 {Human (Homo sapiens) [TaxId: 9606]} 92.25
d1wrba1238 putative ATP-dependent RNA helicase VlgB {Flatworm 92.25
g1ii8.1369 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 92.2
d1t9ha2231 Probable GTPase EngC (YjeQ), C-terminal domain {Ba 92.03
d1tq4a_400 Interferon-inducible GTPase {Mouse (Mus musculus) 92.01
d1vg8a_184 Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} 91.99
d1t5la1413 Nucleotide excision repair enzyme UvrB {Bacillus c 91.99
d1ky3a_175 Rab-related protein ypt7p {Baker's yeast (Saccharo 91.97
d2ew1a1171 Rab30 {Human (Homo sapiens) [TaxId: 9606]} 91.9
d2eyqa3233 Transcription-repair coupling factor, TRCF {Escher 91.85
d2atva1168 Ras-like estrogen-regulated growth inhibitor, RERG 91.83
d1lnza2185 Obg GTP-binding protein middle domain {Bacillus su 91.56
d2erya1171 r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 91.55
d1r2qa_170 Rab5a {Human (Homo sapiens) [TaxId: 9606]} 91.47
d1g16a_166 Rab-related protein Sec4 {Baker's yeast (Saccharom 91.45
d1puia_188 Probable GTPase EngB {Escherichia coli [TaxId: 562 91.43
d2erxa1171 di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 91.3
d2bmea1174 Rab4a {Human (Homo sapiens) [TaxId: 9606]} 91.29
d1z08a1167 Rab21 {Human (Homo sapiens) [TaxId: 9606]} 91.27
d1xtqa1167 GTP-binding protein RheB {Human (Homo sapiens) [Ta 91.24
d2bcgy1194 GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi 91.22
d1z06a1165 Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} 91.2
d1oywa2206 RecQ helicase domain {Escherichia coli [TaxId: 562 91.15
d1egaa1179 GTPase Era, N-terminal domain {Escherichia coli [T 91.14
d1wmsa_174 Rab9a {Human (Homo sapiens) [TaxId: 9606]} 91.04
d1moza_182 ADP-ribosylation factor {Baker's yeast (Saccharomy 90.98
d1kmqa_177 RhoA {Human (Homo sapiens) [TaxId: 9606]} 90.88
d2g6ba1170 Rab26 {Human (Homo sapiens) [TaxId: 9606]} 90.8
d1yzqa1164 Rab6 {Human (Homo sapiens) [TaxId: 9606]} 90.8
d1mkya2186 Probable GTPase Der, N-terminal and middle domains 90.76
d1z0ja1167 Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} 90.74
d1mh1a_183 Rac {Human (Homo sapiens) [TaxId: 9606]} 90.63
d1ek0a_170 Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T 90.24
d1c1ya_167 Rap1A {Human (Homo sapiens) [TaxId: 9606]} 90.23
d1udxa2180 Obg GTP-binding protein middle domain {Thermus the 90.22
d2g3ya1172 GTP-binding protein GEM {Human (Homo sapiens) [Tax 90.12
d1x1ra1169 Ras-related protein M-Ras (XRas) {Mouse (Mus muscu 90.08
g1xew.1329 Smc head domain {Pyrococcus furiosus [TaxId: 2261] 90.01
d2c78a3204 Elongation factor Tu (EF-Tu), N-terminal (G) domai 89.92
d1m7ba_179 RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} 89.87
d2atxa1185 RhoQ {Human (Homo sapiens) [TaxId: 9606]} 89.84
d2ngra_191 CDC42 {Human (Homo sapiens) [TaxId: 9606]} 89.67
d2jdid3276 Central domain of beta subunit of F1 ATP synthase 89.61
d2fu5c1173 Rab8a {Mouse (Mus musculus) [TaxId: 10090]} 89.51
d1ni3a1296 YchF GTP-binding protein N-terminal domain {Fissio 89.35
d1w1wa_427 Smc head domain {Baker's yeast (Saccharomyces cere 89.11
d1osna_331 Thymidine kinase {Varicella-zoster virus [TaxId: 1 89.04
d1xzpa2160 TrmE GTPase domain {Thermotoga maritima [TaxId: 23 88.98
d1azta2221 Transducin (alpha subunit) {Cow (Bos taurus) [TaxI 88.38
d1zcba2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 88.36
d1i2ma_170 Ran {Human (Homo sapiens) [TaxId: 9606]} 88.25
d1nija1222 Hypothetical protein YjiA, N-terminal domain {Esch 87.58
d1e2ka_329 Thymidine kinase {Herpes simplex virus type 1, dif 87.4
d1j3ba1318 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxalo 87.26
d1lkxa_ 684 Myosin S1, motor domain {Dictyostelium discoideum, 87.17
d1fx0a3276 Central domain of alpha subunit of F1 ATP synthase 87.17
d1c9ka_180 Adenosylcobinamide kinase/adenosylcobinamide phosp 87.17
d1d0xa2 712 Myosin S1, motor domain {Dictyostelium discoideum 87.14
d2mysa2 794 Myosin S1, motor domain {Chicken (Gallus gallus), 86.83
d2bmja1175 Centaurin gamma 1, G domain {Human (Homo sapiens) 86.77
d1wb1a4179 Elongation factor SelB, N-terminal domain {Methano 86.67
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 86.3
d1br2a2 710 Myosin S1, motor domain {Chicken (Gallus gallus), 86.18
d1cp2a_269 Nitrogenase iron protein {Clostridium pasteurianum 85.95
d1c4oa1408 Nucleotide excision repair enzyme UvrB {Thermus th 85.81
d2olra1313 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxalo 85.57
d1w7ja2 730 Myosin S1, motor domain {Chicken (Gallus gallus), 85.57
d1kk8a2 789 Myosin S1, motor domain {Bay scallop (Aequipecten 85.08
d1g7sa4227 Initiation factor IF2/eIF5b, N-terminal (G) domain 84.99
d1ii2a1323 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxalo 84.61
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 84.32
d2bcjq2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 84.19
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 84.06
d1qhla_222 Cell division protein MukB {Escherichia coli [TaxI 83.55
d2dy1a2267 Elongation factor G (EF-G), N-terminal (G) domain 82.96
d2b8ta1139 Thymidine kinase, TK1, N-terminal domain {Ureaplas 82.87
d1e69a_308 Smc head domain {Thermotoga maritima [TaxId: 2336] 82.77
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 82.25
g1qhh.1 623 DEXX box DNA helicase {Bacillus stearothermophilus 82.03
d1z63a1230 Helicase of the SNF2/Rad54 hamily {Sulfolobus solf 81.63
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 81.3
d2afhe1289 Nitrogenase iron protein {Azotobacter vinelandii [ 80.92
d1puja_273 Probable GTPase YlqF {Bacillus subtilis [TaxId: 14 80.84
d1svsa1195 Transducin (alpha subunit) {Rat (Rattus norvegicus 80.65
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 80.14
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: AAA domain of cell division protein FtsH
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=0  Score=347.24  Aligned_cols=253  Identities=51%  Similarity=0.879  Sum_probs=236.2

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHH
Q ss_conf             69987203633266799999999999923901120049989955899858998089999999994099889960703589
Q 005611          167 DGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE  246 (688)
Q Consensus       167 ~~~~~i~f~dV~G~~~~k~~L~~ii~~l~~~~~~~~~g~~~~~giLL~GppGtGKTtLakala~~~~~~~~~i~~~~~~~  246 (688)
                      +....++|+||+|+++++++|++++.++.+++.|+++|.++|+++||+||||||||++|+++|++++.+++.++++++.+
T Consensus         4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~   83 (256)
T d1lv7a_           4 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE   83 (256)
T ss_dssp             ECSSCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTT
T ss_pred             CCCCCCCHHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf             88999899998163999999999999987999999869998886786689988822899999998299879988699426


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             98643257999999999838993999825214653102875675012322311899999999999842887998189998
Q 005611          247 VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLA  326 (688)
Q Consensus       247 ~~~g~~~~~~r~~f~~A~~~~p~IL~LDEid~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~viVIa  326 (688)
                      .|+|+++++++.+|+.|+..+||||||||+|+++..++.....        ......+++++++..+|++..+.+++|||
T Consensus        84 ~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~--------~~~~~~~~~~~ll~~~d~~~~~~~v~vIa  155 (256)
T d1lv7a_          84 MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGG--------GHDEREQTLNQMLVEMDGFEGNEGIIVIA  155 (256)
T ss_dssp             SCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCC--------TTCHHHHHHHHHHHHHHTCCSSSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCC--------CCHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             0010789999999999997599899997756657567898888--------74899999999999953877779989998


Q ss_pred             ECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             33888868822369886430120268995669999999960276788557788986199997999999999999999982
Q 005611          327 ATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRK  406 (688)
Q Consensus       327 aTN~~~~Ld~aL~r~gRfd~~I~i~~P~~~eR~~Il~~~l~~~~~~~~~dl~~la~~t~g~s~~dL~~lv~~A~~~A~~~  406 (688)
                      |||+|+.+|++++|||||+++|++++|+.++|.+|++.++++.+...+.++..+++.|.||+++||.++|++|...|.++
T Consensus       156 tTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~  235 (256)
T d1lv7a_         156 ATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG  235 (256)
T ss_dssp             EESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             07993107985768987877987799599999999998425998686569999998689989999999999999999982


Q ss_pred             CCCCCCHHHHHHHHHHHCCCC
Q ss_conf             996546878999997631598
Q 005611          407 GHESILSSDMDDAVDRLTVGP  427 (688)
Q Consensus       407 ~~~~I~~~di~~Ai~~~~~g~  427 (688)
                      ++..|+..|++.|++++..|.
T Consensus       236 ~~~~i~~~d~~~Al~rv~~g~  256 (256)
T d1lv7a_         236 NKRVVSMVEFEKAKDKIMMGL  256 (256)
T ss_dssp             TCSSBCHHHHHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHHHHHHCCC
T ss_conf             898348999999999996699
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ce7a1 a.269.1.1 (A:411-603) Cell division protein FtsH, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} Back     information, alignment and structure
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} Back     information, alignment and structure
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]} Back     information, alignment and structure
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Back     information, alignment and structure
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} Back     information, alignment and structure
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} Back     information, alignment and structure
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Back     information, alignment and structure
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} Back     information, alignment and structure
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} Back     information, alignment and structure
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]} Back     information, alignment and structure
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]} Back     information, alignment and structure
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]} Back     information, alignment and structure
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} Back     information, alignment and structure
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]} Back     information, alignment and structure
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]} Back     information, alignment and structure
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]} Back     information, alignment and structure
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Back     information, alignment and structure
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]} Back     information, alignment and structure
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]} Back     information, alignment and structure
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure