Citrus Sinensis ID: 005682

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680---

MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL

ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccHHHHHcccccccccHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccccccccHHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHcHHHHHHHHHccccEEEccccccccHHccHccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccHHHHHHccHHHHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcc

MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVrltherppssnsdkkngfndYLIEeeegindqsvVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGsvegfstkgqactydqqkmckpalatAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGyglggssmALFGRVGGGIYTKAADVGADLVGKvernipeddprnpaviadnvgdnvgdiagmgsdlfgsyaESSCAALVVASISsfginheftSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWiglpssftiyNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEyytsnayspvqdvadscrtgaaTNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGlaidaygpisdnaggiAEMAGMSHRIRERTDAldaagnttAAIGKGFAIGSAALVSLALFGAFvsragittvdvltPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFntipglmegttkpdyatCVKISTDasikemippgalvmlTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL

MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLtherppssnsdkkngFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVErnipeddprnpaVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKeiepslkkqLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNtipglmegttkpdyaTCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLagslvsgvqvilel

*****LSELATEILVPVCAVVGIIFSLVQWFIVSRVRL********************************VAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVER**********AVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVIL**

***TLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHE********KKNGFNDYL*************AKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFE*****EIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL

MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLT**********KKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL

*GSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHE*************NDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVE*****GQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		683	2.2.26 [Sep-21-2011]
P21616		765	Pyrophosphate-energized v	N/A	no	0.994	0.887	0.883	0.0
P31414		770	Pyrophosphate-energized v	yes	no	0.988	0.876	0.890	0.0
Q06572		762	Pyrophosphate-energized v	N/A	no	0.985	0.883	0.853	0.0
Q8F641		704	Putative K(+)-stimulated	yes	no	0.850	0.825	0.543	1e-178
Q72Q29		704	Putative K(+)-stimulated	yes	no	0.850	0.825	0.543	1e-178
Q2RIS7		672	Putative K(+)-stimulated	yes	no	0.868	0.882	0.449	1e-138
Q898Q9		673	Putative K(+)-stimulated	yes	no	0.803	0.815	0.466	1e-137
Q8PYZ8		676	K(+)-stimulated pyrophosp	yes	no	0.833	0.841	0.430	1e-128
Q8TJA9		676	Putative K(+)-stimulated	yes	no	0.836	0.844	0.432	1e-128
Q3AFC6		686	Putative K(+)-stimulated	yes	no	0.740	0.737	0.481	1e-127

>sp\|P21616\|AVP_VIGRR Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=3	Back alignment and function desciption

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/679 (88%), Positives = 647/679 (95%)

Query: 1   MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIE 60
           MG+ +L +L TEIL+PVCAV+GI F+L QW +VS+V+L+  R  S N+  KNG+NDYLIE
Sbjct: 1   MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIE 60

Query: 61  EEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTK 120
           EEEGIND +VV KCA+IQ+AISEGATSFLFTEY+YVG+FM+AFAILIF+FLGSVEGFST 
Sbjct: 61  EEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTS 120

Query: 121 GQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVG 180
            QAC+YD+ K CKPALATA FSTVSFLLG +TS++SGFLGMKIATYANARTTLEARK VG
Sbjct: 121 PQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVG 180

Query: 181 KAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240
           KAFI AFRSGAVMGFLLAANGLLVL+IAINLFK+YYGDDW GLFEAITGYGLGGSSMALF
Sbjct: 181 KAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF 240

Query: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300
           GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA
Sbjct: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300

Query: 301 ESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPS 360
           ESSCAALVVASISSFG+NHE T+MLYPL++SS+GILVCL+TTLFATD FE+KAVKEIEP+
Sbjct: 301 ESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPA 360

Query: 361 LKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGF 420
           LKKQL+ISTVLMT+G+A+VS++ LP+SFTI+NFG QK VK+WQLFLCVAVGLWAGLIIGF
Sbjct: 361 LKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGF 420

Query: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480
           VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SIFVSF+FAAMY
Sbjct: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY 480

Query: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540
           GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG
Sbjct: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540

Query: 541 KGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600
           KGFAIGSAALVSLALFGAFVSRA ITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA
Sbjct: 541 KGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600

Query: 601 ALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF 660
           ALKMVEEVRRQFNTIPGLMEGT KPDYATCVKISTDASIKEMIPPGALVMLTPL+VGI F
Sbjct: 601 ALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILF 660

Query: 661 GVETLSGVLAGSLVSGVQV 679
           GVETLSGVLAGSLVSGVQ+
Sbjct: 661 GVETLSGVLAGSLVSGVQI 679

Contributes to the transtonoplast (from cytosol to vacuole lumen) H(+)-electrochemical potential difference. It establishes a proton gradient of similar and often greater magnitude than the H(+)-ATPase on the same membrane.
Vigna radiata var. radiata (taxid: 3916)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp\|P31414\|AVP1_ARATH Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1	Back alignment and function description

>sp\|Q06572\|AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2	Back alignment and function description

>sp\|Q8F641\|HPPA_LEPIN Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=hppA PE=3 SV=1	Back alignment and function description

>sp\|Q72Q29\|HPPA_LEPIC Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=hppA PE=3 SV=1	Back alignment and function description

>sp\|Q2RIS7\|HPPA1_MOOTA Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Moorella thermoacetica (strain ATCC 39073) GN=hppA1 PE=1 SV=1	Back alignment and function description

>sp\|Q898Q9\|HPPA_CLOTE Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Clostridium tetani (strain Massachusetts / E88) GN=hppA PE=3 SV=1	Back alignment and function description

>sp\|Q8PYZ8\|HPPA1_METMA K(+)-stimulated pyrophosphate-energized sodium pump OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=hppA1 PE=1 SV=1	Back alignment and function description

>sp\|Q8TJA9\|HPPA1_METAC Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=hppA1 PE=3 SV=2	Back alignment and function description

>sp\|Q3AFC6\|HPPA_CARHZ Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=hppA PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		683
307948772		766	pyrophosphate-energized vacuolar membran	0.994	0.886	0.927	0.0
356526237		768	PREDICTED: pyrophosphate-energized vacuo	0.994	0.884	0.916	0.0
356519282		768	PREDICTED: pyrophosphate-energized vacuo	0.994	0.884	0.914	0.0
225463618		767	PREDICTED: pyrophosphate-energized vacuo	0.994	0.885	0.910	0.0
45479863		769	PPase [Hevea brasiliensis]	0.994	0.882	0.913	0.0
25901033		767	vacuolar proton-inorganic pyrophosphatas	0.991	0.882	0.911	0.0
15982956		767	vacuolar H+-pyrophosphatase [Prunus pers	0.991	0.882	0.908	0.0
224120498		768	vacuolar H+-translocating inorganic pyro	0.994	0.884	0.894	0.0
356548534		765	PREDICTED: pyrophosphate-energized vacuo	0.994	0.887	0.891	0.0
336112676		763	vacuolar H+-pyrophosphatase [Salicornia	0.988	0.884	0.896	0.0

>gi\|307948772\|gb\|ADN96173.1\| pyrophosphate-energized vacuolar membrane proton pump [Gossypium hirsutum]	Back alignment and taxonomy information

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/679 (92%), Positives = 655/679 (96%)

Query: 1   MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIE 60
           MG+ +LSELATEI+VPVCAV+GI FSLVQW +VSRV+LT ER  SS +  KNG+ DYLIE
Sbjct: 1   MGAAMLSELATEIVVPVCAVIGIAFSLVQWVMVSRVKLTSERHASSANSSKNGYGDYLIE 60

Query: 61  EEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTK 120
           EEEGIND SVV KCADIQ+AISEGATSFLFTEYQYVG+FMIAFAILIF+FLGSVEGFSTK
Sbjct: 61  EEEGINDHSVVTKCADIQNAISEGATSFLFTEYQYVGIFMIAFAILIFLFLGSVEGFSTK 120

Query: 121 GQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVG 180
            Q CTYD++KMCKPALATA FSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARK VG
Sbjct: 121 SQPCTYDKEKMCKPALATAIFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVG 180

Query: 181 KAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240
           KAFIVAFRSGAVMGFLLAANGLLVL+IAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF
Sbjct: 181 KAFIVAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240

Query: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300
           GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA
Sbjct: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300

Query: 301 ESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPS 360
           ESSCAALVVASISSFGINH+FT MLYPLLISS+GILVCLITTLFATD+FE+K VKEIEP+
Sbjct: 301 ESSCAALVVASISSFGINHDFTGMLYPLLISSVGILVCLITTLFATDLFEIKVVKEIEPA 360

Query: 361 LKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGF 420
           LKKQLIIST+LMTVGIAIV+WIG+PSSFTIYNFG QKVVKNWQLFLCV VGLWAGLIIGF
Sbjct: 361 LKKQLIISTILMTVGIAIVTWIGVPSSFTIYNFGVQKVVKNWQLFLCVGVGLWAGLIIGF 420

Query: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480
           VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SIFVSFSFAAMY
Sbjct: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMY 480

Query: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540
           GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG
Sbjct: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540

Query: 541 KGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600
           KGFAIGSAALVSLALFGAFVSRA ITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA
Sbjct: 541 KGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600

Query: 601 ALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF 660
           ALKMVEEVRRQFNTIPGLMEG  KPDYATCVKISTDASIKEMIPPGALVMLTPLIVG FF
Sbjct: 601 ALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFF 660

Query: 661 GVETLSGVLAGSLVSGVQV 679
           GVETLSGVLAG+LVSGVQ+
Sbjct: 661 GVETLSGVLAGALVSGVQI 679

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356526237\|ref\|XP_003531725.1\| PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Glycine max]	Back alignment and taxonomy information

>gi\|356519282\|ref\|XP_003528302.1\| PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Glycine max]	Back alignment and taxonomy information

>gi\|225463618\|ref\|XP_002273207.1\| PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Vitis vinifera] gi\|297743526\|emb\|CBI36393.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|45479863\|gb\|AAS66771.1\| PPase [Hevea brasiliensis]	Back alignment and taxonomy information

>gi\|25901033\|dbj\|BAC41250.1\| vacuolar proton-inorganic pyrophosphatase [Pyrus communis]	Back alignment and taxonomy information

>gi\|15982956\|gb\|AAL11506.1\|AF367446_1 vacuolar H+-pyrophosphatase [Prunus persica]	Back alignment and taxonomy information

>gi\|224120498\|ref\|XP_002331062.1\| vacuolar H+-translocating inorganic pyrophosphatase [Populus trichocarpa] gi\|222872992\|gb\|EEF10123.1\| vacuolar H+-translocating inorganic pyrophosphatase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356548534\|ref\|XP_003542656.1\| PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Glycine max]	Back alignment and taxonomy information

>gi\|336112676\|gb\|AEI17666.1\| vacuolar H+-pyrophosphatase [Salicornia europaea]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		683
TAIR\|locus:2036134		770	AVP1 [Arabidopsis thaliana (ta	0.991	0.879	0.888	0.0
GENEDB_PFALCIPARUM\|PF14_0541		717	PF14_0541 "V-type H(+)-translo	0.781	0.744	0.531	2.4e-155
UNIPROTKB\|Q8IKR1		717	PF14_0541 "V-type H(+)-translo	0.781	0.744	0.531	2.4e-155
TIGR_CMR\|DET_0784		679	DET_0784 "V-type H(+)-transloc	0.751	0.755	0.453	2.2e-122
TIGR_CMR\|GSU_3291		680	GSU_3291 "V-type H(+)-transloc	0.780	0.783	0.448	1.2e-119
TIGR_CMR\|CHY_0286		686	CHY_0286 "V-type H(+)-transloc	0.733	0.730	0.449	3.1e-106
TIGR_CMR\|DET_0766		708	DET_0766 "V-type H(+)-transloc	0.843	0.813	0.354	2.1e-84
TAIR\|locus:2037543		802	VP2 "vacuolar H+-pyrophosphata	0.679	0.578	0.378	9.3e-75

TAIR\|locus:2036134 AVP1 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3078 (1088.6 bits), Expect = 0., P = 0.
 Identities = 604/680 (88%), Positives = 645/680 (94%)

Query:     5 LLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSN---SDKKNGFNDYLIEE 61
             LL EL TEILVP+CAV+GI FSL QW++VSRV+LT +   SS+   ++ KNG+ DYLIEE
Sbjct:     6 LLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYLIEE 65

Query:    62 EEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKG 121
             EEG+NDQSVVAKCA+IQ+AISEGATSFLFTEY+YVGVFMI FA +IFVFLGSVEGFST  
Sbjct:    66 EEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDN 125

Query:   122 QACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGK 181
             + CTYD  + CKPALATAAFST++F+LGA+TSVLSGFLGMKIATYANARTTLEARK VGK
Sbjct:   126 KPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGK 185

Query:   182 AFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFG 241
             AFIVAFRSGAVMGFLLAA+GLLVL+I IN+FK+YYGDDWEGLFEAITGYGLGGSSMALFG
Sbjct:   186 AFIVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSSMALFG 245

Query:   242 RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE 301
             RVGGGIYTKAADVGADLVGK+ERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE
Sbjct:   246 RVGGGIYTKAADVGADLVGKIERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE 305

Query:   302 SSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSL 361
             +SCAALVVASISSFGINH+FT+M YPLLISS+GILVCLITTLFATD FE+K VKEIEP+L
Sbjct:   306 ASCAALVVASISSFGINHDFTAMCYPLLISSMGILVCLITTLFATDFFEIKLVKEIEPAL 365

Query:   362 KKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFV 421
             K QLIISTV+MTVGIAIVSW+GLP+SFTI+NFG QKVVKNWQLFLCV VGLWAGLIIGFV
Sbjct:   366 KNQLIISTVIMTVGIAIVSWVGLPTSFTIFNFGTQKVVKNWQLFLCVCVGLWAGLIIGFV 425

Query:   422 TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYG 481
             TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SIFVSFSFAAMYG
Sbjct:   426 TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYG 485

Query:   482 IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK 541
             +AVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK
Sbjct:   486 VAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK 545

Query:   542 GFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAA 601
             GFAIGSAALVSLALFGAFVSRAGI TVDVLTPKV IGL+VGAMLPYWFSAMTMKSVGSAA
Sbjct:   546 GFAIGSAALVSLALFGAFVSRAGIHTVDVLTPKVIIGLLVGAMLPYWFSAMTMKSVGSAA 605

Query:   602 LKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFG 661
             LKMVEEVRRQFNTIPGLMEGT KPDYATCVKISTDASIKEMIPPG LVMLTPLIVG FFG
Sbjct:   606 LKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGCLVMLTPLIVGFFFG 665

Query:   662 VETLSGVLAGSLVSGVQVIL 681
             VETLSGVLAGSLVSGVQ+ +
Sbjct:   666 VETLSGVLAGSLVSGVQIAI 685

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009678 "hydrogen-translocating pyrophosphatase activity" evidence=IEA;IDA

GO:0015992 "proton transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0010248 "establishment or maintenance of transmembrane electrochemical gradient" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009926 "auxin polar transport" evidence=IGI

GO:0010008 "endosome membrane" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0048366 "leaf development" evidence=IMP

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GENEDB_PFALCIPARUM\|PF14_0541 PF14_0541 "V-type H(+)-translocating pyrophosphatase, putative" [Plasmodium falciparum (taxid:5833)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8IKR1 PF14_0541 "V-type H(+)-translocating pyrophosphatase, putative" [Plasmodium falciparum 3D7 (taxid:36329)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0784 DET_0784 "V-type H(+)-translocating pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_3291 GSU_3291 "V-type H(+)-translocating pyrophosphatase" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

TIGR_CMR\|CHY_0286 CHY_0286 "V-type H(+)-translocating pyrophosphatase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0766 DET_0766 "V-type H(+)-translocating pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TAIR\|locus:2037543 VP2 "vacuolar H+-pyrophosphatase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8F641	HPPA_LEPIN	3, ., 6, ., 1, ., 1	0.5438	0.8506	0.8252	yes	no
Q8TJA9	HPPA1_METAC	3, ., 6, ., 1, ., 1	0.4320	0.8360	0.8446	yes	no
Q2RIS7	HPPA1_MOOTA	3, ., 6, ., 1, ., 1	0.4497	0.8682	0.8824	yes	no
Q8P5M6	HPPA_XANCP	3, ., 6, ., 1, ., 1	0.3984	0.8213	0.8311	yes	no
Q82TF3	HPPA_NITEU	3, ., 6, ., 1, ., 1	0.4022	0.8330	0.8306	yes	no
Q8PH20	HPPA_XANAC	3, ., 6, ., 1, ., 1	0.4006	0.8125	0.8222	yes	no
Q898Q9	HPPA_CLOTE	3, ., 6, ., 1, ., 1	0.4666	0.8038	0.8157	yes	no
P31414	AVP1_ARATH	3, ., 6, ., 1, ., 1	0.8908	0.9882	0.8766	yes	no
Q72Q29	HPPA_LEPIC	3, ., 6, ., 1, ., 1	0.5438	0.8506	0.8252	yes	no
P21616	AVP_VIGRR	3, ., 6, ., 1, ., 1	0.8836	0.9941	0.8875	N/A	no
Q8PYZ8	HPPA1_METMA	3, ., 6, ., 1, ., 1	0.4303	0.8330	0.8417	yes	no
Q8RCX1	HPPA_THETN	3, ., 6, ., 1, ., 1	0.4068	0.8521	0.8185	yes	no
Q06572	AVP_HORVU	3, ., 6, ., 1, ., 1	0.8533	0.9853	0.8832	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1.1	0.979
3rd Layer	3.6.1	0.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00003295001	SubName- Full=Chromosome undetermined scaffold_141, whole genome shotgun sequence; (767 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038692001	SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (110 aa)	•	0.899
	GSVIVG00038691001	SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (134 aa)	•	0.899
	GSVIVG00038681001	SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (110 aa)	•	0.899
	GSVIVG00037933001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (349 aa)	•	0.899
	GSVIVG00036158001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (488 aa)	•	0.899
	GSVIVG00035973001	SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotg [...] (164 aa)	•	0.899
	GSVIVG00035934001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (822 aa)	•	0.899
	GSVIVG00035666001	SubName- Full=Chromosome undetermined scaffold_79, whole genome shotgun sequence; (74 aa)	•	0.899
	GSVIVG00035613001	SubName- Full=Chromosome undetermined scaffold_79, whole genome shotgun sequence; (159 aa)	•	0.899
	atpF	SubName- Full=Chromosome undetermined scaffold_79, whole genome shotgun sequence;; F(1)F(0) ATP [...] (81 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		683
PLN02255		765	PLN02255, PLN02255, H(+) -translocating inorganic	0.0
TIGR01104		695	TIGR01104, V_PPase, vacuolar-type H(+)-translocati	0.0
pfam03030		669	pfam03030, H_PPase, Inorganic H+ pyrophosphatase	0.0
PRK00733		666	PRK00733, hppA, membrane-bound proton-translocatin	0.0
COG3808		703	COG3808, OVP1, Inorganic pyrophosphatase [Energy p	0.0
PLN02277		730	PLN02277, PLN02277, H(+) -translocating inorganic	1e-134

>gnl\|CDD\|215143 PLN02255, PLN02255, H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

 Score = 1260 bits (3262), Expect = 0.0
 Identities = 602/678 (88%), Positives = 645/678 (95%), Gaps = 1/678 (0%)

Query: 3   STLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKN-GFNDYLIEE 61
             +LSELATE+L+PV A++GI F+L+QW++VSRV+++ +   SSN      G+ DYLIEE
Sbjct: 1   MAILSELATEVLIPVAALIGIAFALLQWYLVSRVKVSPDSGASSNGGGGGGGYGDYLIEE 60

Query: 62  EEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKG 121
           EEG+ND +VVAKCA+IQ+AISEGATSFLFTEY+YVG+FM+ FA +IFVFLGSVEGFSTK 
Sbjct: 61  EEGLNDHNVVAKCAEIQNAISEGATSFLFTEYKYVGIFMVIFAAVIFVFLGSVEGFSTKS 120

Query: 122 QACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGK 181
           Q CTYD+ K+CKPALA AAFSTV+FLLGA+TSV+SGFLGMKIATYANARTTLEARK VGK
Sbjct: 121 QPCTYDKGKLCKPALANAAFSTVAFLLGALTSVVSGFLGMKIATYANARTTLEARKGVGK 180

Query: 182 AFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFG 241
           AFI AFRSGAVMGFLLAANGLLVL+IAINLFKLYYGDDWEGL+EAITGYGLGGSSMALFG
Sbjct: 181 AFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLYEAITGYGLGGSSMALFG 240

Query: 242 RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE 301
           RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE
Sbjct: 241 RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE 300

Query: 302 SSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSL 361
           SSCAALVVASISSFGINH+FT+M YPLLISS+GI+VCLITTLFATD FE+KAVKEIEP+L
Sbjct: 301 SSCAALVVASISSFGINHDFTAMCYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPAL 360

Query: 362 KKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFV 421
           KKQLIISTVLMTVGIA+VSW+ LPSSFTI+NFG QKVVKNWQLF CVA+GLWAGLIIGFV
Sbjct: 361 KKQLIISTVLMTVGIAVVSWLALPSSFTIFNFGTQKVVKNWQLFFCVAIGLWAGLIIGFV 420

Query: 422 TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYG 481
           TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSI+VSFS AAMYG
Sbjct: 421 TEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIYVSFSLAAMYG 480

Query: 482 IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK 541
           IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK
Sbjct: 481 IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGK 540

Query: 542 GFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAA 601
           GFAIGSAALVSLALFGAFVSRAGI+TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAA
Sbjct: 541 GFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAA 600

Query: 602 LKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFG 661
           LKMVEEVRRQFNTIPGLMEGT KPDYATCVKISTDASIKEMIPPGALVMLTPLIVG  FG
Sbjct: 601 LKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFG 660

Query: 662 VETLSGVLAGSLVSGVQV 679
           VETLSGVLAG+LVSGVQ+
Sbjct: 661 VETLSGVLAGALVSGVQI 678

Length = 765

>gnl\|CDD\|213586 TIGR01104, V_PPase, vacuolar-type H(+)-translocating pyrophosphatase	Back alignment and domain information

>gnl\|CDD\|217327 pfam03030, H_PPase, Inorganic H+ pyrophosphatase	Back alignment and domain information

>gnl\|CDD\|234827 PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	Back alignment and domain information

>gnl\|CDD\|226330 COG3808, OVP1, Inorganic pyrophosphatase [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|177916 PLN02277, PLN02277, H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		683
PLN02255		765	H(+) -translocating inorganic pyrophosphatase	100.0
TIGR01104		697	V_PPase vacuolar-type H(+)-translocating pyrophosp	100.0
PLN02277		730	H(+) -translocating inorganic pyrophosphatase	100.0
PF03030		682	H_PPase: Inorganic H+ pyrophosphatase; InterPro: I	100.0
PRK00733		666	hppA membrane-bound proton-translocating pyrophosp	100.0
COG3808		703	OVP1 Inorganic pyrophosphatase [Energy production	100.0

>PLN02255 H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

Probab=100.00  E-value=2.5e-218  Score=1809.40  Aligned_cols=681  Identities=88%  Similarity=1.346  Sum_probs=624.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCC-CCCCCCcchhhhhhcCCCchhhcHHHHHHHHHH
Q 005682            3 STLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNS-DKKNGFNDYLIEEEEGINDQSVVAKCADIQSAI   81 (683)
Q Consensus         3 ~~~~~~~a~~~~~~~~~~~~l~~a~~~~~~v~~v~i~~~~~~~~~~-~~~ng~~~~~~~~~~g~~~~~~~~~m~~Is~~I   81 (683)
                      ++++||+++..+++++++++++||+++++||+|.+.++++.+++.. +..++++++..++++|++++++++|||||+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~e~~eG~~~~~~~~~m~~Ia~~I   80 (765)
T PLN02255          1 MAILSELATEVLIPVAALIGIAFALLQWYLVSRVKVSPDSGASSNGGGGGGGYGDYLIEEEEGLNDHNVVAKCAEIQNAI   80 (765)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccccccccccccccccccccccCccccccCHHHHHHHHHH
Confidence            4689999999999999999999999999999998876655443333 456667777777777777788899999999999


Q ss_pred             HHhhhhhhhhhheehhhHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhhhh
Q 005682           82 SEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGM  161 (683)
Q Consensus        82 ~eGA~afL~~qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~laG~iGM  161 (683)
                      ||||++||+||||++++|++++++++++++.+.++.+++++++.+++.+.|+++....++++++|++|+++|.++||+||
T Consensus        81 ~eGA~afL~rqyk~i~~~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fl~Ga~~S~~aG~iGM  160 (765)
T PLN02255         81 SEGATSFLFTEYKYVGIFMVIFAAVIFVFLGSVEGFSTKSQPCTYDKGKLCKPALANAAFSTVAFLLGALTSVVSGFLGM  160 (765)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999776654333333444555666677888777778899999999999999999999


Q ss_pred             hhhhhhhHhhHHHHhhCHhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHhhhcchhhHHHHHH
Q 005682          162 KIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFG  241 (683)
Q Consensus       162 ~vAt~aN~Rta~aA~~g~~~al~vafr~GsVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~i~gf~~GaS~iALFa  241 (683)
                      |+|||+|+|||+|||++++++|++|||+|+||||+|++++|++++++|++|..+++++..+.+++++||+||+|++|||+
T Consensus       161 ~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvgl~Llgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iAlFa  240 (765)
T PLN02255        161 KIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLYEAITGYGLGGSSMALFG  240 (765)
T ss_pred             HHHHHHHHHHHHHHHhchHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhHHhhhcccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998864454444446789999999999999999


Q ss_pred             HhhccccchhhhhcccccchhhcCCCCCCCCCcchhhccccccccccccccchhhhhhHHHHHHHHHHHHHhhcCCCccc
Q 005682          242 RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEF  321 (683)
Q Consensus       242 RvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aamil~~~~~~~~~~~~  321 (683)
                      |+||||||||||||||||||||+|||||||||||||||||||||||||||+|||||||++++||+|+++....++.+.++
T Consensus       241 RvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~s~vaamilg~~~~~~~~~~~  320 (765)
T PLN02255        241 RVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDF  320 (765)
T ss_pred             HHcCceeeeccccchhhhhhhhcCCCCCCCCCcchHHHhhcccccccccccchhHHHHHHHHHHHHHHHHHHhccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999963212333334


Q ss_pred             ccchHhHHHHHHHHHHHHHHHhhhhhhhhcccccCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccccccch
Q 005682          322 TSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKN  401 (683)
Q Consensus       322 ~~v~~Plli~a~gil~Siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~~l~~i~~~~~~~~~l~~~~~~~~~g~~~~~~~  401 (683)
                      ..+.|||+++++||++|+++++++|.++|.++++|++++||+++|+|++++++.+|++++|++|.++..+..++.+..++
T Consensus       321 ~~v~~PLli~~~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~g~~~~~~~  400 (765)
T PLN02255        321 TAMCYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTVGIAVVSWLALPSSFTIFNFGTQKVVKN  400 (765)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHheecccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhccccccccccc
Confidence            46999999999999999999999986677777779999999999999999999999999999987544332233234457


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhccCCCchhHHHHhhhccCCchhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 005682          402 WQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYG  481 (683)
Q Consensus       402 ~~~f~~~~~Gl~~g~lI~~~TeYyTS~~~~PVr~IA~as~tG~AtnII~Gla~Gm~St~~Pvl~I~~ai~~sy~l~GlyG  481 (683)
                      |++|+|+++|+++|++|+++||||||++|||||+||++|+||||||||+||++||+||+||+++|++++++||+++|+||
T Consensus       401 ~~~f~~~~iGl~~g~lI~~iTeYyTs~~y~PV~~IA~aS~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~glyG  480 (765)
T PLN02255        401 WQLFFCVAIGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIYVSFSLAAMYG  480 (765)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhHhhhhccccccccCCcchhhccCCchHHHHHhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHh
Q 005682          482 IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVS  561 (683)
Q Consensus       482 ialAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~eVR~~tD~LDa~GNTTaAi~KGfaIGSAaL~aLaLf~ay~~  561 (683)
                      +++|++|||||+++++++|+||||+||||||||||++|||||+|||+||++||||||+|||||||||+|+||+||++|++
T Consensus       481 iaiAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~~~VR~~TD~LDAvGNTTkAi~KGfAIGSAaLaalaLF~ay~~  560 (765)
T PLN02255        481 IAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVS  560 (765)
T ss_pred             HHHHHHHHHHHhHHhheeecccCcccCccCHHHHhcCCHHHHHHhhhhcccCCchhhhcccchhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeecCChhHHHHHHhhhhHHHHHHhHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHhh
Q 005682          562 RAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKE  641 (683)
Q Consensus       562 ~~~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~Alke  641 (683)
                      +.++..+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+||||+||||||||+||||
T Consensus       561 ~~~~~~~~l~~P~Vl~GlliG~mlpflFsal~m~AVg~aA~~mV~EVRRQFreipGimeG~~kPDY~~cV~I~T~aAlke  640 (765)
T PLN02255        561 RAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKE  640 (765)
T ss_pred             hcCCCeeecCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhcCCCCCChHHHHHHHHHHHHHh
Confidence            98888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhchhhHHHHhHHHHHhhhhhhHHHHHhhhhHHHHHHHhhcC
Q 005682          642 MIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL  683 (683)
Q Consensus       642 Mi~Pgllail~Pi~vG~~~G~~al~GlL~G~~~sG~~lAi~~  683 (683)
                      ||.|+++++++|+++|++||+++++|+|+|+++||++||+||
T Consensus       641 Mi~Pgll~v~~Pi~vg~~~G~~al~GlL~G~~vsGv~lAi~m  682 (765)
T PLN02255        641 MIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISA  682 (765)
T ss_pred             hhHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999997

>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase	Back alignment and domain information

>PLN02277 H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively)	Back alignment and domain information

>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated	Back alignment and domain information

>COG3808 OVP1 Inorganic pyrophosphatase [Energy production and conversion]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		683
4a01_A		766	Crystal Structure Of The H-Translocating Pyrophosph		0.0
4av3_A		735	Crystal Structure Of Thermotoga Maritima Sodium Pum		1e-109

>pdb|4A01|A Chain A, Crystal Structure Of The H-Translocating Pyrophosphatase Length = 766

Back alignment and structure

Iteration: 1

Score = 1229 bits (3179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 600/679 (88%), Positives = 647/679 (95%) Query: 1 MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIE 60 MG+ +L +L TEIL+PVCAV+GI F+L QW +VS+V+L+ R S N+ KNG+NDYLIE Sbjct: 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIE 60 Query: 61 EEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTK 120 EEEGIND +VV KCA+IQ+AISEGATSFLFTEY+YVG+FM+AFAILIF+FLGSVEGFST Sbjct: 61 EEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTS 120 Query: 121 GQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVG 180 QAC+YD+ K CKPALATA FSTVSFLLG +TS++SGFLGMKIATYANARTTLEARK VG Sbjct: 121 PQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVG 180 Query: 181 KAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240 KAFI AFRSGAVMGFLLAANGLLVL+IAINLFK+YYGDDW GLFEAITGYGLGGSSMALF Sbjct: 181 KAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF 240 Query: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA Sbjct: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300 Query: 301 ESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPS 360 ESSCAALVVASISSFG+NHE T+MLYPL++SS+GILVCL+TTLFATD FE+KAVKEIEP+ Sbjct: 301 ESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPA 360 Query: 361 LKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGF 420 LKKQL+ISTVLMT+G+A+VS++ LP+SFTI+NFG QK VK+WQLFLCVAVGLWAGLIIGF Sbjct: 361 LKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGF 420 Query: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SIFVSF+FAAMY Sbjct: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY 480 Query: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG Sbjct: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540 Query: 541 KGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600 KGFAIGSAALVSLALFGAFVSRA ITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA Sbjct: 541 KGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600 Query: 601 ALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF 660 ALKMVEEVRRQFNTIPGLMEGT KPDYATCVKISTDASIKEMIPPGALVMLTPL+VGI F Sbjct: 601 ALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILF 660 Query: 661 GVETLSGVLAGSLVSGVQV 679 GVETLSGVLAGSLVSGVQ+ Sbjct: 661 GVETLSGVLAGSLVSGVQI 679

PyMOL of 4a01

>pdb|4AV3|A Chain A, Crystal Structure Of Thermotoga Maritima Sodium Pumping Membrane Integral Pyrophosphatase With Metal Ions In Active Site Length = 735

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		683
4a01_A		766	Proton pyrophosphatase; hydrolase, membrane protei	0.0
4av3_A		735	K(+)-stimulated pyrophosphate-energized sodium PU;	0.0
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata} Length = 766	Back alignment and structure

 Score =  828 bits (2140), Expect = 0.0
 Identities = 600/679 (88%), Positives = 647/679 (95%)

Query: 1   MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIE 60
           MG+ +L +L TEIL+PVCAV+GI F+L QW +VS+V+L+  R  S N+  KNG+NDYLIE
Sbjct: 1   MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIE 60

Query: 61  EEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTK 120
           EEEGIND +VV KCA+IQ+AISEGATSFLFTEY+YVG+FM+AFAILIF+FLGSVEGFST 
Sbjct: 61  EEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTS 120

Query: 121 GQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVG 180
            QAC+YD+ K CKPALATA FSTVSFLLG +TS++SGFLGMKIATYANARTTLEARK VG
Sbjct: 121 PQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVG 180

Query: 181 KAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240
           KAFI AFRSGAVMGFLLAANGLLVL+IAINLFK+YYGDDW GLFEAITGYGLGGSSMALF
Sbjct: 181 KAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF 240

Query: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300
           GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA
Sbjct: 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA 300

Query: 301 ESSCAALVVASISSFGINHEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPS 360
           ESSCAALVVASISSFG+NHE T+MLYPL++SS+GILVCL+TTLFATD FE+KAVKEIEP+
Sbjct: 301 ESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPA 360

Query: 361 LKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGF 420
           LKKQL+ISTVLMT+G+A+VS++ LP+SFTI+NFG QK VK+WQLFLCVAVGLWAGLIIGF
Sbjct: 361 LKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGF 420

Query: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480
           VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SIFVSF+FAAMY
Sbjct: 421 VTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY 480

Query: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540
           GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG
Sbjct: 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIG 540

Query: 541 KGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600
           KGFAIGSAALVSLALFGAFVSRA ITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA
Sbjct: 541 KGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSA 600

Query: 601 ALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF 660
           ALKMVEEVRRQFNTIPGLMEGT KPDYATCVKISTDASIKEMIPPGALVMLTPL+VGI F
Sbjct: 601 ALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILF 660

Query: 661 GVETLSGVLAGSLVSGVQV 679
           GVETLSGVLAGSLVSGVQ+
Sbjct: 661 GVETLSGVLAGSLVSGVQI 679

PyMOL of 4a01

>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A Length = 735	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		683
4a01_A		766	Proton pyrophosphatase; hydrolase, membrane protei	100.0
4av3_A		735	K(+)-stimulated pyrophosphate-energized sodium PU;	100.0

>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}	Back alignment and structure

Probab=100.00  E-value=5.5e-224  Score=1853.60  Aligned_cols=683  Identities=88%  Similarity=1.345  Sum_probs=623.0

Q ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCCCCCCCCcchhhhhhcCCCchhhcHHHHHHHHH
Q 005682            1 MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSA   80 (683)
Q Consensus         1 ~~~~~~~~~a~~~~~~~~~~~~l~~a~~~~~~v~~v~i~~~~~~~~~~~~~ng~~~~~~~~~~g~~~~~~~~~m~~Is~~   80 (683)
                      ||.+.+||+++..++++++++|++||+++|++|+|||+++++..+.+++++||+++++.++++|.+++++.+|||||+++
T Consensus         1 ~~~~~~~~~~~~~~i~~~~~~Gi~fa~~~~~~vs~v~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~eIa~a   80 (766)
T 4a01_A            1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNA   80 (766)
T ss_dssp             -CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCC-------------------------CCHHHHHHHHHHHH
T ss_pred             CCcchhhhhhhhhHhHHHHHHHHHHHHHHHHheEeEEecCCccccccccccCCcccccchhhcccchHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999877544445567889999999999998888888999999999


Q ss_pred             HHHhhhhhhhhhheehhhHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhhh
Q 005682           81 ISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLG  160 (683)
Q Consensus        81 I~eGA~afL~~qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~laG~iG  160 (683)
                      |||||++||+||||++++|+++++++|++++.+...++++++++.+++.+.|++++...++++++|++|+++|.++||+|
T Consensus        81 I~eGA~afL~rqYk~i~~~~vv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~~aG~iG  160 (766)
T 4a01_A           81 ISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLG  160 (766)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCCCEEETTEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988766544555677777888888888888888999999999999999999999


Q ss_pred             hhhhhhhhHhhHHHHhhCHhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHhhhcchhhHHHHH
Q 005682          161 MKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF  240 (683)
Q Consensus       161 M~vAt~aN~Rta~aA~~g~~~al~vafr~GsVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~i~gf~~GaS~iALF  240 (683)
                      ||+|||+|+|||+|||+|+++||++|||+|+||||+|++|||++++++|++|..++++++.+.++++.||+||+|++|||
T Consensus       161 M~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvglgLlgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iAlF  240 (766)
T 4a01_A          161 MKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF  240 (766)
T ss_dssp             HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHhhcchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998887666666666789999999999999999


Q ss_pred             HHhhccccchhhhhcccccchhhcCCCCCCCCCcchhhccccccccccccccchhhhhhHHHHHHHHHHHHHhhcCCCcc
Q 005682          241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHE  320 (683)
Q Consensus       241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aamil~~~~~~~~~~~  320 (683)
                      +||||||||||||||||||||||+|||||||||||||||||||||||||||+|||||||++++|++|+|+....++.+.+
T Consensus       241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~t~iaamvlg~~~~~~~~~~  320 (766)
T 4a01_A          241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHE  320 (766)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSCCCTTCTTCTTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHHHTTC
T ss_pred             HHhccchhhhhhhhccccccccccCCCCcCCCCcchhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHhhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997542222234


Q ss_pred             cccchHhHHHHHHHHHHHHHHHhhhhhhhhcccccCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccccccc
Q 005682          321 FTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVK  400 (683)
Q Consensus       321 ~~~v~~Plli~a~gil~Siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~~l~~i~~~~~~~~~l~~~~~~~~~g~~~~~~  400 (683)
                      +..++|||+++++||++|+++++++|++++.++++|+|++||+|+|+|++++++++|++++|++|++++.+..++.+...
T Consensus       321 ~~~v~~PL~i~a~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~~~~~  400 (766)
T 4a01_A          321 LTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVK  400 (766)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhheeEeeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccch
Confidence            56799999999999999999999998777788889999999999999999999999999999999876543333333456


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhccCCCchhHHHHhhhccCCchhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 005682          401 NWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY  480 (683)
Q Consensus       401 ~~~~f~~~~~Gl~~g~lI~~~TeYyTS~~~~PVr~IA~as~tG~AtnII~Gla~Gm~St~~Pvl~I~~ai~~sy~l~Gly  480 (683)
                      ||++|+|+++|+++|.+|+++||||||++|||||+||++|+||||||||+||++||+||++|+++|++++++||+++|+|
T Consensus       401 ~~~~f~~~~~Gl~~g~lI~~iTeYyTs~~~~PV~~IA~aS~TG~ATnII~GlavGm~St~~Pvl~i~~ai~~sy~l~gly  480 (766)
T 4a01_A          401 SWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY  480 (766)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHhCcCchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhHhhhhccccccccCCcchhhccCCchHHHHHhhhhhccCcccccccchhhHHHHHHHHHHHHHHHH
Q 005682          481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV  560 (683)
Q Consensus       481 GialAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~eVR~~tD~LDa~GNTTaAi~KGfaIGSAaL~aLaLf~ay~  560 (683)
                      |+|+||+|||||+++++++|+||||+||||||||||+||||||+|||+||++||||||+|||||||||+|+||+||++|+
T Consensus       481 GiAlAa~GMLst~g~~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTaAi~KGfAIGSAaL~AlaLf~ay~  560 (766)
T 4a01_A          481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV  560 (766)
T ss_dssp             HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhheeeeeccCCcccCcccHHHHccCcHHHHHHHHhhhhccCchhhhccchhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccceeecCChhHHHHHHhhhhHHHHHHhHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHh
Q 005682          561 SRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIK  640 (683)
Q Consensus       561 ~~~~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~IsT~~Alk  640 (683)
                      ++.++..+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+||||+||||||||+|||
T Consensus       561 ~~~~~~~~~l~~P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~aAlk  640 (766)
T 4a01_A          561 SRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIK  640 (766)
T ss_dssp             HHTTCSCCBSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHHHHHH
T ss_pred             HHhccceeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHHHHH
Confidence            99988889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhchhhHHHHhHHHHHhhhhhhHHHHHhhhhHHHHHHHhhcC
Q 005682          641 EMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQVILEL  683 (683)
Q Consensus       641 eMi~Pgllail~Pi~vG~~~G~~al~GlL~G~~~sG~~lAi~~  683 (683)
                      |||.|+++++++|+++|++||+++|+|+|+|+++||++||+||
T Consensus       641 eMi~Pgllav~~Pi~vG~~lG~~al~G~L~G~~vsGv~~Ai~m  683 (766)
T 4a01_A          641 EMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISA  683 (766)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987

PyMOL of 4a01

>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00