Citrus Sinensis ID: 005746

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------68

MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSASLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSSRGKGRGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSGTWNRCWRHKRNC

ccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccHHHHHHHHccccccccccccccEEEEEEcccHHccccccccccccccEEEccccccccHHcccccccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHcccEEEEccccccccccccccEEEEccccHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHccccccHHHHHHcccccccccccHHHHHcccccccEEEcccccccccccccccHHHcccHHHHHHcccccccEEEcccccccccccccHHHHHccccccccccEEEEEEEEcccccccHHHHHHHHHHHHccccccEEEEccccccHHHHHHcccEEEEccccccccccHHHHHHHHcccccccccEEEcccccccccHHHHHHccccc

cccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccHHHEEcccHHHHHHHHHHHHHHHccEEEEcccccccccHEcccccccccccccHHHHccccEEEcccccEEccccccEEcccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccHHHHccccccccccEEEEEcccccHHHHHHccccccccccccccHHHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHcccEEEccHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccEEEEccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHEEccccccHHHHHHHHHHHHHHcccccccHHHHHcccccccHcHHHHHHHHHHcccHHcHHHccccccccEEccHHHHHcccHHHHHccccccEccccccccEEccccccEEEEEccccccHHEEEEEEEEEcccccccHHHHHHHHHHHHHcccccccEEEccccHHHHHHHHHccEEEEEcccccccccHEEHHHHHccccccccEEEEcccccccccHHHHHHHcccc

medslnggdlHVNVArqssfrqggslksslsgrstpknspsfrrlnasrtprrevRSASLQWFRSNRLVYWLLLITLWTYLGFYVQsrwahgenndkflgfggkrrneivdsnqnKRRDLIanhsdldinngtiktlgadskKIDMVLTQRRNNDASRRSVAKRKkskrssrgkgrgkqkaKLDVESNymeaqlpeipmtnasygllvgpfgltedrilewspekrsgtcdrkgdfaRFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLskrgglmpELARRKIKVLedrgepsfktsmKADLVIAGSAVCATWIDQYitrfpaggsQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLklrsqpavvplsvndeLAFVAGFtcslntptsspekmREKRNLLRDSVrkemgltdqDMLVLSLssinpgkgQLLLVESAQLMieqepsmddskirksrnvgrkkssltsrhhlrgrgllqmsddvglssnelsvssesftqlnepvrknllspslftsigntdavsfgsghlrrkvlsksdgkQQQALKILIGsvgsksnkvpYVKEILEFLSQHSnlskamlwtpattRVASLYSAADVYVinsqglgetfgRVTIEAMAfgvpknisqielsrkdptsgtwnrcwrhkrnc

medslnggDLHVNvarqssfrqggslksslsgrstpknspsfrrlnasrtprrevrsaslqwfrsNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLianhsdldinngtiktlgadskkidmvltqrrnndasrrsvakrkkskrssrgkgrgkqkakldveSNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILewspekrsgtcdrkgDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVlskrgglmpelARRKIKvledrgepsfktsmkaDLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFlsesqtkqwlTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTcslntptsspekmrekRNLLRDSVrkemgltdqDMLVLSLSSINPGKGQLLLVESAQLMIEqepsmddskirksrnvgrkkssltsrhhlrgrgllqmsdDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVlsksdgkqqQALKIligsvgsksnkVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFgvpknisqielsrkdptsgtwnrcwrhkrnc

MEDSLNGGDLHVNVARQSSFRQggslksslsgrsTPKNSPSFRRLNASRTPRREVRSASLQWFRSNRlvywlllitlwtylGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDasrrsvakrkkskrssrgkgrgkqkakLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGlssnelsvssesFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSGTWNRCWRHKRNC

**********************************************************SLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGK***********************DINNGTI**************************************************************IPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVL**********SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSL********************************LVLSL********QLLLV******************************************************************************LFTSIGNTDAVSF*******************ALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIEL********TWNRCW******

***********VN***********************************************QWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKF*********************LIANHSDLDINNGTIKT*GADSKKID*********************************************EAQLPEIPMTNASYGLLVGPFGLTEDR********************RFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV**************KIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESA********************VGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSS*SFT**NEPVRKNLLSPSLFTSIGNTDAVSFGSGHL***V*****GKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIEL****PTSGTWNRCWRHK***

********DLHVNVARQS************************RRLN***********ASLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGTIKTLGADSKKIDMVLTQ*********************************DVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLN************RNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQ************************RHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRK**********QALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE*********TWNRCWRHKRNC

******GGDLHVNVARQS**************************************SASLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGTIKTLGADSKKIDMVLTQRR************************GKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSGTWNRCWR*****

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		679
147838732		734	hypothetical protein VITISV_013841 [Viti	0.952	0.881	0.693	0.0
225442687		691	PREDICTED: uncharacterized protein LOC10	0.886	0.871	0.676	0.0
255574530		686	glycosyltransferase, putative [Ricinus c	0.880	0.871	0.656	0.0
297743306		683	unnamed protein product [Vitis vinifera]	0.879	0.874	0.653	0.0
224054196		681	predicted protein [Populus trichocarpa]	0.874	0.872	0.663	0.0
449464260		682	PREDICTED: uncharacterized protein LOC10	0.876	0.872	0.595	0.0
356555993		701	PREDICTED: uncharacterized protein LOC10	0.907	0.878	0.618	0.0
356547414		701	PREDICTED: uncharacterized protein LOC10	0.907	0.878	0.604	0.0
297847636		670	glycosyl transferase family 1 protein [A	0.849	0.861	0.600	0.0
15233237		697	UDP-glycosyltransferase-like protein [Ar	0.873	0.850	0.606	0.0

>gi\|147838732\|emb\|CAN71826.1\| hypothetical protein VITISV_013841 [Vitis vinifera]	Back alignment and taxonomy information

 Score =  904 bits (2335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/655 (69%), Positives = 541/655 (82%), Gaps = 8/655 (1%)

Query: 1   MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSASL 60
           ME+    GD H NV RQSS R GGSLKS+LSGRSTP+NSPSFRR ++SRTPRRE RS+ +
Sbjct: 1   MEEGNGRGDFHGNVVRQSSLRPGGSLKSTLSGRSTPRNSPSFRRSHSSRTPRREARSSGV 60

Query: 61  --QWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
             QWFR+NR+V+WL+LITLW YLGFYVQS+WAHG+NN+  +GFGGK  N I DS  N++ 
Sbjct: 61  GSQWFRNNRVVFWLILITLWAYLGFYVQSKWAHGDNNEDIIGFGGKPNNGISDSELNRKA 120

Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSS---RGKG 175
            LIAN   L + NG+ K      KK+D+VL ++ N+  SRRS + +K+SK+S    RGK 
Sbjct: 121 PLIANDKLLAVKNGSDKNPVGSGKKVDVVLAKKGNSVPSRRSASSKKRSKKSERSLRGKT 180

Query: 176 RGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGD 235
           R KQK K +VE   M+ Q  EIP  N SYGLLVGPFG TEDRILEWSPEKRSGTCDR+G+
Sbjct: 181 R-KQKTKTEVEVTEMDEQEQEIPKLNTSYGLLVGPFGSTEDRILEWSPEKRSGTCDRRGE 239

Query: 236 FARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKI 295
            AR VWSRKF+LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK+GGLMPELARR+I
Sbjct: 240 LARLVWSRKFVLIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMPELARRRI 299

Query: 296 KVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRA 355
           KVLEDR + SFKT+MKADLVIAGSAVCA+WI+QYI  F AG SQ+VWWIMENRREYFDR+
Sbjct: 300 KVLEDRADLSFKTAMKADLVIAGSAVCASWIEQYIAHFTAGSSQIVWWIMENRREYFDRS 359

Query: 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTP 415
           KLV++RVK+L+FLSESQ+KQWLTWC+EE ++L SQPAVVPLSVNDELAFVAG TCSLNTP
Sbjct: 360 KLVINRVKMLIFLSESQSKQWLTWCKEENIRLISQPAVVPLSVNDELAFVAGITCSLNTP 419

Query: 416 TSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSM 475
           + + EKM+EKR LLRDS+RKEMGLTD DML+LSLSSINPGKGQ  L+ES + MIEQEPS 
Sbjct: 420 SFTTEKMQEKRRLLRDSIRKEMGLTDTDMLLLSLSSINPGKGQFFLLESVRSMIEQEPSQ 479

Query: 476 DDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535
           DD +++    +G+ +S+ + +H+   R LLQ  +   +SS+ L +S+ESF +LN P  KN
Sbjct: 480 DDPELKDLAKIGQDQSNFSGKHY--SRALLQNVNHFSVSSSGLRLSNESFIELNGPKSKN 537

Query: 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEIL 595
           L+ PSLF SI  +DAVS GSG+ RRKVLS+++G Q+QALK+LIGSVGSKSNKVPYVK +L
Sbjct: 538 LMLPSLFPSISPSDAVSIGSGYKRRKVLSENEGTQEQALKVLIGSVGSKSNKVPYVKGLL 597

Query: 596 EFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV 650
            FL +HSNLSK++LWTPATTRVASLYSAADVYVINSQG+GETFGRV+IEAMAFG+
Sbjct: 598 RFLXRHSNLSKSVLWTPATTRVASLYSAADVYVINSQGMGETFGRVSIEAMAFGL 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225442687\|ref\|XP_002284822.1\| PREDICTED: uncharacterized protein LOC100246448 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255574530\|ref\|XP_002528176.1\| glycosyltransferase, putative [Ricinus communis] gi\|223532388\|gb\|EEF34183.1\| glycosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|297743306\|emb\|CBI36173.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224054196\|ref\|XP_002298139.1\| predicted protein [Populus trichocarpa] gi\|222845397\|gb\|EEE82944.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449464260\|ref\|XP_004149847.1\| PREDICTED: uncharacterized protein LOC101207532 [Cucumis sativus] gi\|449496350\|ref\|XP_004160111.1\| PREDICTED: uncharacterized protein LOC101223486 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356555993\|ref\|XP_003546312.1\| PREDICTED: uncharacterized protein LOC100793827 [Glycine max]	Back alignment and taxonomy information

>gi\|356547414\|ref\|XP_003542107.1\| PREDICTED: uncharacterized protein LOC100795000 [Glycine max]	Back alignment and taxonomy information

>gi\|297847636\|ref\|XP_002891699.1\| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi\|297337541\|gb\|EFH67958.1\| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|15233237|ref|NP_188215.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|334185383|ref|NP_001189906.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|9294599|dbj|BAB02880.1| glycosyl transferases-like protein [Arabidopsis thaliana] gi|20147191|gb|AAM10311.1| AT3g15940/MVC8_7 [Arabidopsis thaliana] gi|22796166|emb|CAD45267.1| putative glycosyltransferase [Arabidopsis thaliana] gi|332642228|gb|AEE75749.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|332642229|gb|AEE75750.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		679
TAIR\|locus:2093925		697	AT3G15940 [Arabidopsis thalian	0.686	0.668	0.577	4.5e-176
TAIR\|locus:2018144		670	AT1G52420 [Arabidopsis thalian	0.702	0.711	0.549	2.4e-166
TAIR\|locus:2018392		463	AT1G75420 [Arabidopsis thalian	0.315	0.462	0.295	9.3e-14
TAIR\|locus:2013089		479	AT1G19710 [Arabidopsis thalian	0.313	0.444	0.273	4.6e-12

TAIR\|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1380 (490.8 bits), Expect = 4.5e-176, Sum P(2) = 4.5e-176
 Identities = 277/480 (57%), Positives = 350/480 (72%)

Query:    35 TPKNSPSFRRLNASRTPRREVRSA--SLQWFRSNRXXXXXXXXXXXXXXGFYVQSRWAHG 92
             TP+ SP+ R++++ RTPRRE + +  ++QWFRSNR              GFYVQSRWAH 
Sbjct:    23 TPRGSPTLRKVHSGRTPRREGKGSGGAVQWFRSNRLLYWLLLITLWTYLGFYVQSRWAHD 82

Query:    93 ENND-KFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGT-IKTLGADSKKIDMVLTQ 150
             ++N  +FL FGGK R +++   QNKRRDL+A+ S   + + T I  LG + K++ + L +
Sbjct:    83 DDNKVEFLRFGGKLREDVLHVEQNKRRDLVADESSHAVVDHTNIVHLGVN-KRMHVTLAK 141

Query:   151 RRNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXLD--VESNYMEAQLPEIPMTNASYGLLV 208
             + ++                            +   +E+  ++ Q  E+P  N +YG L 
Sbjct:   142 KEDSTSRRSVSPRRRTRKASRSSRTRIRSTQKVRKVMETKELDEQDQELPNINVTYGKLF 201

Query:   209 GPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATEL 268
             GPFG  EDRILEWSP+KRSGTCDRK DF R VWSR+F+L+FHELSMTGAP+SMMELA+EL
Sbjct:   202 GPFGSLEDRILEWSPQKRSGTCDRKSDFKRLVWSRRFVLLFHELSMTGAPISMMELASEL 261

Query:   269 LSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQ 328
             LSCGATV AVVLS+RGGL+ EL RR+IKV+ED+GE SFKT+MKADLVIAGSAVCA+WIDQ
Sbjct:   262 LSCGATVYAVVLSRRGGLLQELTRRRIKVVEDKGELSFKTAMKADLVIAGSAVCASWIDQ 321

Query:   329 YITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLR 388
             Y+   PAGGSQ+ WW+MENRREYFDRAK VLDRVKLL+FLSE Q+KQWLTWCEE+ +KLR
Sbjct:   322 YMDHHPAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIFLSEVQSKQWLTWCEEDHVKLR 381

Query:   389 SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLS 448
             SQP +VPLSVNDELAFVAG + SLNTPT + E M+EKR  LR+SVR E GLTD+DMLV+S
Sbjct:   382 SQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQKLRESVRTEFGLTDKDMLVMS 441

Query:   449 LSSINPGKGQLLLVESAQLMIEQEPSMDD------SKIRKSRN-VGRKKSSLTSRHHLRG 501
             LSSINPGKGQLLL+ES  L +E+E + +       SKI K+ N + ++K SL++RH LRG
Sbjct:   442 LSSINPGKGQLLLLESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEKISLSARHRLRG 501

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR\|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		679
pfam00534		158	pfam00534, Glycos_transf_1, Glycosyl transferases	2e-06
cd03801		374	cd03801, GT1_YqgM_like, This family is most closel	5e-06
cd03820		348	cd03820, GT1_amsD_like, This family is most closel	5e-06
cd03798		377	cd03798, GT1_wlbH_like, This family is most closel	3e-05
cd03814		364	cd03814, GT1_like_2, This family is most closely r	8e-05
cd03825		365	cd03825, GT1_wcfI_like, This family is most closel	2e-04
cd03817		374	cd03817, GT1_UGDG_like, This family is most closel	3e-04
COG0438		381	COG0438, RfaG, Glycosyltransferase [Cell envelope	3e-04
cd01635		229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	4e-04
cd03800		398	cd03800, GT1_Sucrose_synthase, This family is most	4e-04
cd03808		359	cd03808, GT1_cap1E_like, This family is most close	0.001

>gnl\|CDD\|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1	Back alignment and domain information

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 569 KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VASLYSAADV 626
           +Q   LK++I  VG    +    K  L+       L   +++        +  LY  AD+
Sbjct: 29  EQHPNLKLVI--VGDGEEEKKLKKLALKL-----GLEDNVIFVGFVPDEDLIELYRIADL 81

Query: 627 YVINSQGLGETFGRVTIEAMAFGVP 651
           +V+ S+   E FG V +EAMA GVP
Sbjct: 82  FVLPSRY--EGFGLVLLEAMAAGVP 104

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl\|CDD\|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>gnl\|CDD\|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>gnl\|CDD\|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		679
KOG0853		495	consensus Glycosyltransferase [Cell wall/membrane/	100.0
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03812		358	GT1_CapH_like This family is most closely related	99.97
cd03819		355	GT1_WavL_like This family is most closely related	99.97
cd03805		392	GT1_ALG2_like This family is most closely related	99.97
cd03807		365	GT1_WbnK_like This family is most closely related	99.96
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	99.96
cd03792		372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.96
cd04962		371	GT1_like_5 This family is most closely related to	99.96
cd04951		360	GT1_WbdM_like This family is most closely related	99.96
cd03796		398	GT1_PIG-A_like This family is most closely related	99.96
cd03811		353	GT1_WabH_like This family is most closely related	99.95
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	99.95
PRK00654		466	glgA glycogen synthase; Provisional	99.94
PLN02316		1036	synthase/transferase	99.94
cd03821		375	GT1_Bme6_like This family is most closely related	99.94
PRK09922		359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.94
cd03802		335	GT1_AviGT4_like This family is most closely relate	99.94
TIGR02472		439	sucr_P_syn_N sucrose-phosphate synthase, putative,	99.94
PRK10307		412	putative glycosyl transferase; Provisional	99.94
cd03820		348	GT1_amsD_like This family is most closely related	99.94
cd03800		398	GT1_Sucrose_synthase This family is most closely r	99.94
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.94
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.94
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	99.94
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.94
PRK14099		485	glycogen synthase; Provisional	99.93
cd03818		396	GT1_ExpC_like This family is most closely related	99.93
PRK15490		578	Vi polysaccharide biosynthesis protein TviE; Provi	99.93
cd03816		415	GT1_ALG1_like This family is most closely related	99.93
cd03825		365	GT1_wcfI_like This family is most closely related	99.93
cd03795		357	GT1_like_4 This family is most closely related to	99.93
cd03822		366	GT1_ecORF704_like This family is most closely rela	99.93
cd03791		476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.93
cd03808		359	GT1_cap1E_like This family is most closely related	99.93
PRK10125		405	putative glycosyl transferase; Provisional	99.92
PLN02939		977	transferase, transferring glycosyl groups	99.92
cd03817		374	GT1_UGDG_like This family is most closely related	99.92
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	99.92
cd04955		363	GT1_like_6 This family is most closely related to	99.92
cd03809		365	GT1_mtfB_like This family is most closely related	99.92
cd03794		394	GT1_wbuB_like This family is most closely related	99.92
cd03801		374	GT1_YqgM_like This family is most closely related	99.92
cd03823		359	GT1_ExpE7_like This family is most closely related	99.91
cd03799		355	GT1_amsK_like This is a family of GT1 glycosyltran	99.91
cd03814		364	GT1_like_2 This family is most closely related to	99.91
PRK14098		489	glycogen synthase; Provisional	99.91
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	99.91
TIGR02470		784	sucr_synth sucrose synthase. This model represents	99.91
PLN02275		371	transferase, transferring glycosyl groups	99.9
cd03806		419	GT1_ALG11_like This family is most closely related	99.9
cd03798		377	GT1_wlbH_like This family is most closely related	99.9
TIGR02468		1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.9
PLN02846		462	digalactosyldiacylglycerol synthase	99.9
PLN02949		463	transferase, transferring glycosyl groups	99.89
cd03813		475	GT1_like_3 This family is most closely related to	99.88
PLN00142		815	sucrose synthase	99.87
TIGR03087		397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.87
cd03804		351	GT1_wbaZ_like This family is most closely related	99.86
PLN02501		794	digalactosyldiacylglycerol synthase	99.86
TIGR02918		500	accessory Sec system glycosylation protein GtfA. M	99.85
PHA01633		335	putative glycosyl transferase group 1	99.83
PHA01630		331	putative group 1 glycosyl transferase	99.83
cd04949		372	GT1_gtfA_like This family is most closely related	99.82
KOG1111		426	consensus N-acetylglucosaminyltransferase complex,	99.8
cd04946		407	GT1_AmsK_like This family is most closely related	99.8
cd03785		350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.77
cd01635		229	Glycosyltransferase_GTB_type Glycosyltransferases	99.76
PRK00726		357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.76
PRK05749		425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.74
cd03788		460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.74
TIGR01133		348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.72
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	99.72
PRK13609		380	diacylglycerol glucosyltransferase; Provisional	99.67
cd03793		590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.64
TIGR02400		456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.64
PLN02605		382	monogalactosyldiacylglycerol synthase	99.63
cd04950		373	GT1_like_1 Glycosyltransferases catalyze the trans	99.55
COG0297		487	GlgA Glycogen synthase [Carbohydrate transport and	99.54
PRK00025		380	lpxB lipid-A-disaccharide synthase; Reviewed	99.45
cd03786		363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.42
PLN03063		797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.42
PRK13608		391	diacylglycerol glucosyltransferase; Provisional	99.42
PRK14501		726	putative bifunctional trehalose-6-phosphate syntha	99.4
TIGR00215		385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.39
COG0438		381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.38
TIGR00236		365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.27
TIGR02398		487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.24
PF13692		135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.15
PF13439		177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	98.99
KOG1387		465	consensus Glycosyltransferase [Cell wall/membrane/	98.64
PLN03064		934	alpha,alpha-trehalose-phosphate synthase (UDP-form	98.63
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	98.55
PF13579		160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	98.49
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	98.47
TIGR02094		601	more_P_ylases alpha-glucan phosphorylases. This fa	98.25
TIGR03713		519	acc_sec_asp1 accessory Sec system protein Asp1. Th	98.22
PRK12446		352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.16
PF05693		633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	98.09
cd03784		401	GT1_Gtf_like This family includes the Gtfs, a grou	97.8
TIGR02919		438	accessory Sec system glycosyltransferase GtfB. Mem	97.8
TIGR03568		365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	97.77
PF13528		318	Glyco_trans_1_3: Glycosyl transferase family 1	97.77
COG3914		620	Spy Predicted O-linked N-acetylglucosamine transfe	97.55
PF00982		474	Glyco_transf_20: Glycosyltransferase family 20; In	97.45
PF02684		373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	97.31
PF13477		139	Glyco_trans_4_2: Glycosyl transferase 4-like	97.3
cd04299		778	GT1_Glycogen_Phosphorylase_like This family is mos	97.04
PF13844		468	Glyco_transf_41: Glycosyl transferase family 41; P	97.0
PRK10117		474	trehalose-6-phosphate synthase; Provisional	96.93
COG1519		419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	96.93
PRK01021		608	lpxB lipid-A-disaccharide synthase; Reviewed	96.86
COG0707		357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	96.81
PF04007		335	DUF354: Protein of unknown function (DUF354); Inte	96.75
TIGR03492		396	conserved hypothetical protein. This protein famil	96.2
PLN02205		854	alpha,alpha-trehalose-phosphate synthase [UDP-form	96.18
COG0380		486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	95.97
KOG2941		444	consensus Beta-1,4-mannosyltransferase [Posttransl	95.93
PF13524		92	Glyco_trans_1_2: Glycosyl transferases group 1	95.55
PF09314		185	DUF1972: Domain of unknown function (DUF1972); Int	95.48
PF06258		311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	94.83
COG0763		381	LpxB Lipid A disaccharide synthetase [Cell envelop	94.8
PF04101		167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	94.51
TIGR00661		321	MJ1255 conserved hypothetical protein. This model	93.51
TIGR01426		392	MGT glycosyltransferase, MGT family. This model de	93.42
COG0381		383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	92.97
PF04464		369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	90.71
PF07429		360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	90.61
COG3660		329	Predicted nucleoside-diphosphate-sugar epimerase [	85.76
TIGR02195		334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	82.47
PF00343		713	Phosphorylase: Carbohydrate phosphorylase; InterPr	82.26
PF05159		269	Capsule_synth: Capsule polysaccharide biosynthesis	82.13
COG3980		318	spsG Spore coat polysaccharide biosynthesis protei	80.61
PRK10422		352	lipopolysaccharide core biosynthesis protein; Prov	80.46

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

Probab=100.00  E-value=1.7e-37  Score=337.35  Aligned_cols=391  Identities=22%  Similarity=0.151  Sum_probs=323.0

Q ss_pred             CCCCCCcccee-eEeeccchhhcCCCCCCCCcccceeeccCCcchhhhccccccccccccCCcccccccCCCCeEEEEeC
Q 005746          172 RGKGRGKQKAK-LDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFH  250 (679)
Q Consensus       172 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~gp~~~~e~~~l~~s~~~~~~~c~~k~~f~~~~~~rKILlI~h  250 (679)
                      ....+-.||.. ..++..+..++.|+.|..+.+|+...+++|.-|+++++|++...+ +|+ +-. ..+++++.++++.|
T Consensus         6 ~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-~~~-~lg-~~d~G~qV~~l~~h   82 (495)
T KOG0853|consen    6 SSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-GQD-VLG-LPDTGGQVVYLTSH   82 (495)
T ss_pred             hhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-ccc-ccC-CCCCCceEEEEehh
Confidence            34455566664 333344444788999999999999999999999999999999999 899 666 89999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHH-CCCeEEEEEeCCCCC--ChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchhHHHHHH
Q 005746          251 ELSMTGAPLSMMELATELLS-CGATVSAVVLSKRGG--LMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWID  327 (679)
Q Consensus       251 eLsmgGAplsmmeLAteL~s-~G~~VsaVvLs~~Gg--L~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav~aswI~  327 (679)
                      ..+++ +|..++.++..|.- ++..|+...+++..+  +......++++|+..+....++..+++|++|.+.+.|+.||.
T Consensus        83 ~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~~~~~~l~  161 (495)
T KOG0853|consen   83 EDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFVSACVPLL  161 (495)
T ss_pred             hhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchHHHHHHHH
Confidence            99999 99999999999986 899998888887664  677778899999999998889999999999999999999999


Q ss_pred             HHHHhcCCCCccEEEeeehhhHHHHHH--HHHHhhcCCEEEEechhhHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhh
Q 005746          328 QYITRFPAGGSQVVWWIMENRREYFDR--AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFV  405 (679)
Q Consensus       328 qyia~~pag~s~VvWwI~E~rreYfdr--~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l~sq~~VVP~gVndElafv  405 (679)
                      +++.+ |....+++||+|+.++.|+.+  ....+.+...-++-++.+..+|..++....+....+..+++++.+++...+
T Consensus       162 ~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y  240 (495)
T KOG0853|consen  162 KQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTY  240 (495)
T ss_pred             HHhcC-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceee
Confidence            99888 999999999999999999986  344455555555668999999999988777766667899999999887778


Q ss_pred             hccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhccc
Q 005746          406 AGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRN  485 (679)
Q Consensus       406 agi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~  485 (679)
                      ++++.+.++|     ++-+++...+..+|.+.|.+..+++++++.++.|+|||+++++|+..+....+.+          
T Consensus       241 ~ei~~s~~~~-----~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~----------  305 (495)
T KOG0853|consen  241 PEIDGSWFTY-----GQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEP----------  305 (495)
T ss_pred             ccccchhccc-----cccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCC----------
Confidence            8776655555     3445556678889999999999999999999999999999999999876543321          


Q ss_pred             ccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhccc
Q 005746          486 VGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK  565 (679)
Q Consensus       486 ~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  565 (679)
                                                                         -+                           
T Consensus       306 ---------------------------------------------------~~---------------------------  307 (495)
T KOG0853|consen  306 ---------------------------------------------------SI---------------------------  307 (495)
T ss_pred             ---------------------------------------------------CC---------------------------
Confidence                                                               01                           


Q ss_pred             ccccccceEEEEEE---eeCCCCCChHHHHHHHHHHHHhCCC-CCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHH
Q 005746          566 SDGKQQQALKILIG---SVGSKSNKVPYVKEILEFLSQHSNL-SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRV  641 (679)
Q Consensus       566 l~~~~~~a~lvLiG---~VGs~snk~~y~k~~L~~L~~~lnL-s~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV  641 (679)
                           +..+.+++|   +++..++...|+++++++ +++++| ++.|.|+..+++++.++.+||+.+..+|+..|+||+|
T Consensus       308 -----~~~hl~~~g~~G~d~~~sen~~~~~el~~l-ie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv  381 (495)
T KOG0853|consen  308 -----SSEHLVVAGSRGYDERDSENVEYLKELLSL-IEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIV  381 (495)
T ss_pred             -----CceEEEEecCCCccccchhhHHHHHHHHHH-HHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccce
Confidence                 122344444   444445567999997765 556888 6899999999999999999999999999888999999


Q ss_pred             HHHHHHcCCCEEEeCCCCCccCCCC
Q 005746          642 TIEAMAFGVPKNISQIELSRKDPTS  666 (679)
Q Consensus       642 ~IEAMA~GlPVV~S~~g~~r~~~~~  666 (679)
                      +|||||||+||+||+.||--|...+
T Consensus       382 ~IEAMa~glPvvAt~~GGP~EiV~~  406 (495)
T KOG0853|consen  382 PIEAMACGLPVVATNNGGPAEIVVH  406 (495)
T ss_pred             eHHHHhcCCCEEEecCCCceEEEEc
Confidence            9999999999999999997764433

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional	Back alignment and domain information

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain	Back alignment and domain information

>PRK10307 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

>PRK14099 glycogen synthase; Provisional	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK10125 putative glycosyl transferase; Provisional	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>TIGR02470 sucr_synth sucrose synthase	Back alignment and domain information

>PLN02275 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant	Back alignment and domain information

>PLN02846 digalactosyldiacylglycerol synthase	Back alignment and domain information

>PLN02949 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN00142 sucrose synthase	Back alignment and domain information

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02501 digalactosyldiacylglycerol synthase	Back alignment and domain information

>TIGR02918 accessory Sec system glycosylation protein GtfA	Back alignment and domain information

>PHA01633 putative glycosyl transferase group 1	Back alignment and domain information

>PHA01630 putative group 1 glycosyl transferase	Back alignment and domain information

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding	Back alignment and domain information

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]	Back alignment and domain information

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis	Back alignment and domain information

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	Back alignment and domain information

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	Back alignment and domain information

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor	Back alignment and domain information

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK13609 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PLN02605 monogalactosyldiacylglycerol synthase	Back alignment and domain information

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)	Back alignment and domain information

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>PRK13608 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional	Back alignment and domain information

>TIGR00215 lpxB lipid-A-disaccharide synthase	Back alignment and domain information

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase	Back alignment and domain information

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase	Back alignment and domain information

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A	Back alignment and domain information

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A	Back alignment and domain information

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>TIGR02094 more_P_ylases alpha-glucan phosphorylases	Back alignment and domain information

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1	Back alignment and domain information

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	Back alignment and domain information

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3	Back alignment and domain information

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

>TIGR02919 accessory Sec system glycosyltransferase GtfB	Back alignment and domain information

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing	Back alignment and domain information

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1	Back alignment and domain information

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like	Back alignment and domain information

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences	Back alignment and domain information

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A	Back alignment and domain information

>PRK10117 trehalose-6-phosphate synthase; Provisional	Back alignment and domain information

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length	Back alignment and domain information

>TIGR03492 conserved hypothetical protein	Back alignment and domain information

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1	Back alignment and domain information

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases	Back alignment and domain information

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins	Back alignment and domain information

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>TIGR00661 MJ1255 conserved hypothetical protein	Back alignment and domain information

>TIGR01426 MGT glycosyltransferase, MGT family	Back alignment and domain information

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria	Back alignment and domain information

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)	Back alignment and domain information

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II	Back alignment and domain information

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT	Back alignment and domain information

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		679
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	3e-07
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	8e-07
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	3e-06
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	3e-06
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	1e-05
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	2e-05
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	4e-05
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	4e-05
2x0d_A		413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	1e-04
3s28_A		816	Sucrose synthase 1; glycosyltransferase, sucrose m	2e-04

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406	Back alignment and structure

 Score = 52.3 bits (126), Expect = 3e-07
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP 651
             AS   +ADVY     G GE+FG V +EAMA G  
Sbjct: 275 TKASAMRSADVYCAPHLG-GESFGIVLVEAMAAGTA 309

PyMOL of 2gek

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177	Back alignment and structure

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413	Back alignment and structure

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		679
3fro_A		439	GLGA glycogen synthase; glycosyltransferase family	99.97
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	99.97
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	99.97
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	99.97
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	99.97
1rzu_A		485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	99.96
2r60_A		499	Glycosyl transferase, group 1; rossmann-fold; 1.80	99.96
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	99.96
2qzs_A		485	Glycogen synthase; glycosyl-transferase, GT-B fold	99.96
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	99.96
2iuy_A		342	Avigt4, glycosyltransferase; antibiotics, family G	99.94
3vue_A		536	GBSS-I, granule-bound starch synthase 1, chloropla	99.94
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	99.93
2x0d_A		413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.91
3s28_A		816	Sucrose synthase 1; glycosyltransferase, sucrose m	99.91
2vsy_A		568	XCC0866; transferase, glycosyl transferase, GT-B,	99.89
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.88
1vgv_A		384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.82
2hy7_A		406	Glucuronosyltransferase GUMK; glycosyltransferases	99.81
2bfw_A		200	GLGA glycogen synthase; glycosyltransferase family	99.79
3beo_A		375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.78
2xci_A		374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.78
1uqt_A		482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.76
1v4v_A		376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.72
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	99.71
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.68
3nb0_A		725	Glycogen [starch] synthase isoform 2; glycogen syn	99.66
3t5t_A		496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.62
3dzc_A		396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.43
3otg_A		412	CALG1; calicheamicin, TDP, structural genomics, PS	99.34
3ot5_A		403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.15
3s2u_A		365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.14
2iyf_A		430	OLED, oleandomycin glycosyltransferase; antibiotic	99.03
4fzr_A		398	SSFS6; structural genomics, PSI-biology, protein s	99.0
3oti_A		398	CALG3; calicheamicin, TDP, structural genomics, PS	98.95
3tsa_A		391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	98.93
3ia7_A		402	CALG4; glycosysltransferase, calicheamicin, enediy	98.82
2p6p_A		384	Glycosyl transferase; X-RAY-diffraction,urdamycina	98.67
3rsc_A		415	CALG2; TDP, enediyne, structural genomics, PSI-2,	98.65
3rhz_A		339	GTF3, nucleotide sugar synthetase-like protein; gl	98.63
4hwg_A		385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	98.62
3q3e_A		631	HMW1C-like glycosyltransferase; N-glycosylation; 2	98.41
4amg_A		400	Snogd; transferase, polyketide biosynthesis, GT1 f	98.19
3h4t_A		404	Glycosyltransferase GTFA, glycosyltransferase; van	98.18
2o6l_A		170	UDP-glucuronosyltransferase 2B7; drug metabolism,	97.93
2c4m_A		796	Glycogen phosphorylase; allosteric control, phosph	97.5
1l5w_A		796	Maltodextrin phosphorylase; enzymatic catalysis, s	97.27
2gj4_A		824	Glycogen phosphorylase, muscle form; transferase;	97.2
2yjn_A		441	ERYCIII, glycosyltransferase; transferase, cytochr	97.19
2iya_A		424	OLEI, oleandomycin glycosyltransferase; carbohydra	96.87
4gyw_A		723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	96.43
3hbm_A		282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	96.41
1psw_A		348	ADP-heptose LPS heptosyltransferase II; structural	96.1
1iir_A		415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	94.98
1rrv_A		416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	94.64
3tov_A		349	Glycosyl transferase family 9; structural genomics	93.12
2jzc_A		224	UDP-N-acetylglucosamine transferase subunit ALG13;	86.23
2gt1_A		326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	81.53

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*	Back alignment and structure

Probab=99.97  E-value=1.8e-30  Score=258.06  Aligned_cols=298  Identities=17%  Similarity=0.151  Sum_probs=207.4

Q ss_pred             CCeEEEEeCC---CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH-----------------HhcCCeEEEEcC
Q 005746          242 SRKFILIFHE---LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-----------------LARRKIKVLEDR  301 (679)
Q Consensus       242 ~rKILlI~he---LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E-----------------L~rrgIkVl~~r  301 (679)
                      +|||++|.++   ...||++..+.+||.+|.+.||+|++++....+....+                 ....|++++..+
T Consensus         2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~   81 (439)
T 3fro_A            2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG   81 (439)
T ss_dssp             CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEec
Confidence            5899999998   45699999999999999999999999986544322110                 034678876543


Q ss_pred             CCc----------------c---h--------h----hhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh--
Q 005746          302 GEP----------------S---F--------K----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--  348 (679)
Q Consensus       302 ~~~----------------s---f--------k----~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r--  348 (679)
                      ...                .   |        +    ...++|+||++...++ ++..++...  .+.++++++|...  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~~~--~~~~~v~~~h~~~~~  158 (439)
T 3fro_A           82 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIKKY--FKIPAVFTIHRLNKS  158 (439)
T ss_dssp             SGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHHHH--HCCCEEEEESCCCCC
T ss_pred             chhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hhHHHHhhc--cCCCEEEEecccccc
Confidence            200                0   0        0    1348999999975432 222223221  1234677777542  


Q ss_pred             ---HHHH--------------HHHHHHhhcCCEEEEechhhHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccC
Q 005746          349 ---REYF--------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCS  411 (679)
Q Consensus       349 ---reYf--------------dr~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~s  411 (679)
                         ..++              ...+..+.+++.+|++|+...+....   ..++. ..++.|||||++.+.+....+   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~---~~~~~-~~~i~vi~ngvd~~~~~~~~~---  231 (439)
T 3fro_A          159 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWG---FFRNF-EGKITYVFNGIDCSFWNESYL---  231 (439)
T ss_dssp             CEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHH---HHGGG-TTSEEECCCCCCTTTSCGGGS---
T ss_pred             cCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhh---hhhhc-CCceeecCCCCCchhcCcccc---
Confidence               1111              12345677899999999987765221   11222 357899999998764321110   


Q ss_pred             CCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccC-CCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccc
Q 005746          412 LNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKK  490 (679)
Q Consensus       412 lntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrIn-p~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~  490 (679)
                            .+     .....+..+|+++|++++ ++|+++|++. +.||++.|++|++.+.++..                 
T Consensus       232 ------~~-----~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~-----------------  282 (439)
T 3fro_A          232 ------TG-----SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE-----------------  282 (439)
T ss_dssp             ------CS-----CHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG-----------------
T ss_pred             ------cc-----hhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc-----------------
Confidence                  00     112346789999999888 9999999999 99999999999999865320                 


Q ss_pred             cccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccc
Q 005746          491 SSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ  570 (679)
Q Consensus       491 ~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  570 (679)
                                                                                                     .
T Consensus       283 -------------------------------------------------------------------------------~  283 (439)
T 3fro_A          283 -------------------------------------------------------------------------------F  283 (439)
T ss_dssp             -------------------------------------------------------------------------------G
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             cceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHc
Q 005746          571 QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF  648 (679)
Q Consensus       571 ~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~  648 (679)
                      +++++++   +|.+.  . ...+.++.++++++  +.+.|+|+  .++++.+|++||++|+||.  .|+||++++|||||
T Consensus       284 ~~~~l~i---~G~g~--~-~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~  353 (439)
T 3fro_A          284 QEMRFII---IGKGD--P-ELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCL  353 (439)
T ss_dssp             GGEEEEE---ECCCC--H-HHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHT
T ss_pred             CCeEEEE---EcCCC--h-hHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHC
Confidence            2345564   56542  2 23466777888777  88899994  6789999999999999996  89999999999999


Q ss_pred             CCCEEEeCCCCCccCCCCC
Q 005746          649 GVPKNISQIELSRKDPTSG  667 (679)
Q Consensus       649 GlPVV~S~~g~~r~~~~~~  667 (679)
                      |+|||+|++++.++...+|
T Consensus       354 G~Pvi~s~~~~~~e~~~~~  372 (439)
T 3fro_A          354 GAIPIASAVGGLRDIITNE  372 (439)
T ss_dssp             TCEEEEESSTHHHHHCCTT
T ss_pred             CCCeEEcCCCCcceeEEcC
Confidence            9999999999988765444

PyMOL of 3fro

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*	Back alignment and structure

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A	Back alignment and structure

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*	Back alignment and structure

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*	Back alignment and structure

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*	Back alignment and structure

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*	Back alignment and structure

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*	Back alignment and structure

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*	Back alignment and structure

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*	Back alignment and structure

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*	Back alignment and structure

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8	Back alignment and structure

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A	Back alignment and structure

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*	Back alignment and structure

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*	Back alignment and structure

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3	Back alignment and structure

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8	Back alignment and structure

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*	Back alignment and structure

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*	Back alignment and structure

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}	Back alignment and structure

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*	Back alignment and structure

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}	Back alignment and structure

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*	Back alignment and structure

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*	Back alignment and structure

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*	Back alignment and structure

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}	Back alignment and structure

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}	Back alignment and structure

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*	Back alignment and structure

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*	Back alignment and structure

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}	Back alignment and structure

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A	Back alignment and structure

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*	Back alignment and structure

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*	Back alignment and structure

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}	Back alignment and structure

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}	Back alignment and structure

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*	Back alignment and structure

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...	Back alignment and structure

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}	Back alignment and structure

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*	Back alignment and structure

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*	Back alignment and structure

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7	Back alignment and structure

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}	Back alignment and structure

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A	Back alignment and structure

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		679
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	99.96
d1rzua_		477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	99.94
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.92
d2bfwa1		196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.79
d2f9fa1		166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.66
d1uqta_		456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.57
d1rrva_		401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.01
d1pn3a_		391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	98.0
d1f0ka_		351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.6
d1iira_		401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	97.45
d1v4va_		373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	92.69
d1j6ua1		89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	89.7
d1p3da1		96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	87.87

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.5e-29  Score=236.77  Aligned_cols=272  Identities=17%  Similarity=0.231  Sum_probs=181.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCC--cc------h-------hhhcCcCE
Q 005746          250 HELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGE--PS------F-------KTSMKADL  314 (679)
Q Consensus       250 heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~--~s------f-------k~~~kaDL  314 (679)
                      +...+||+++.+++||++|.++||+|++++....+...     .+++++..+..  ..      |       ....++|+
T Consensus         8 ~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   82 (370)
T d2iw1a1           8 KYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADR   82 (370)
T ss_dssp             EECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC-----CceEEEEcCccccccchhhHHHHHHHHHHHHhcccce
Confidence            45678999999999999999999999998866555433     35555543321  10      1       12357888


Q ss_pred             EEEcchhH------------HHHHHHHHHhcCCCCccEEEeeehhhHHHH--HHHHHHhhcCCEEEEechhhHHHHHHHH
Q 005746          315 VIAGSAVC------------ATWIDQYITRFPAGGSQVVWWIMENRREYF--DRAKLVLDRVKLLVFLSESQTKQWLTWC  380 (679)
Q Consensus       315 Via~Sav~------------aswI~qyia~~pag~s~VvWwI~E~rreYf--dr~k~vl~rvk~LIfvSesq~k~w~~~~  380 (679)
                      |+.+....            ..|+..   ..+     ..+.++.....+.  .+........+.+++.++...+...   
T Consensus        83 v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  151 (370)
T d2iw1a1          83 VVGFNKMPGLDVYFAADVCYAEKVAQ---EKG-----FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQ---  151 (370)
T ss_dssp             EEESSCCTTCSEEECCSCCHHHHHHH---HCC-----HHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHH---
T ss_pred             eeecccCchHHHHHHhhcccceeeee---ecC-----ccccccchhchhHHHHHHHHhhccCceEEEecHHHHHHHH---
Confidence            87654211            111110   000     0000111011111  1111112346778888877666533   


Q ss_pred             HHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHH
Q 005746          381 EEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLL  460 (679)
Q Consensus       381 ~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~l  460 (679)
                      +..++. ..++.++|+|++.+..+..          ..++        .++..|+.+|++++.++|+++|++.+.||++.
T Consensus       152 ~~~~~~-~~~i~vi~~gv~~~~~~~~----------~~~~--------~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~  212 (370)
T d2iw1a1         152 KHYQTE-PERFQILPPGIYPDRKYSE----------QIPN--------SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDR  212 (370)
T ss_dssp             HHHCCC-GGGEEECCCCCCGGGSGGG----------SCTT--------HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHH
T ss_pred             HhcCCC-cceEEEEEeeccccccccc----------Cchh--------hhhhhhhccCCCccceEEEEEeccccccchhh
Confidence            233433 3467899999987643322          1111        24668899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCC
Q 005746          461 LVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPS  540 (679)
Q Consensus       461 LLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  540 (679)
                      |++|++.+.++.+.                                                                  
T Consensus       213 li~a~~~l~~~~~~------------------------------------------------------------------  226 (370)
T d2iw1a1         213 SIEALASLPESLRH------------------------------------------------------------------  226 (370)
T ss_dssp             HHHHHHTSCHHHHH------------------------------------------------------------------
T ss_pred             hccccccccccccc------------------------------------------------------------------
Confidence            99999987553321                                                                  


Q ss_pred             cccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHH
Q 005746          541 LFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASL  620 (679)
Q Consensus       541 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVasl  620 (679)
                                                      ..++++|  |.+ .+     +.++.+++++++.+.|+|+|..++++.+
T Consensus       227 --------------------------------~~~~ii~--g~~-~~-----~~~~~~~~~~~~~~~v~~~g~~~~~~~~  266 (370)
T d2iw1a1         227 --------------------------------NTLLFVV--GQD-KP-----RKFEALAEKLGVRSNVHFFSGRNDVSEL  266 (370)
T ss_dssp             --------------------------------TEEEEEE--SSS-CC-----HHHHHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred             --------------------------------ceeeecc--ccc-cc-----cccccccccccccccccccccccccccc
Confidence                                            1234433  332 11     2345667778999999999999999999


Q ss_pred             HHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCC
Q 005746          621 YSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDP  664 (679)
Q Consensus       621 ysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~  664 (679)
                      |++|||+|+||.  .|+||++++||||||+|||+|++++.++..
T Consensus       267 ~~~adv~v~ps~--~E~~~~~~~EAma~G~PvI~s~~~g~~e~i  308 (370)
T d2iw1a1         267 MAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYI  308 (370)
T ss_dssp             HHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHH
T ss_pred             cccccccccccc--cccccceeeecccCCeeEEEeCCCChHHHh
Confidence            999999999996  899999999999999999999999988643

PyMOL of d2iw1a1

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure