Citrus Sinensis ID: 005782

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------
MASTIAFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVIKS
ccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHcEEEcccccccccccccEEEEccccccccccccccccHHHHHHHccHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHccccccEEEEcccccHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcEEEEEccccccccccccccEEEEEcccccccccccccccccccccccHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHccEEEEEEEccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccEEcccccccccccccccccccccccccccccHHcccccccEEEEEEEEEEccccccccEEEEEEEcccccccccccccccccEEEcccccEEEEEEEEcccccEEEEcccccEEEcccEEEEEEccccccEEEEEEEEEEEEc
cccccccccccccEEccccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHccccEEEccccccccccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccEEcHHHHHHHccHHHHHHHHcccccEEHHEHcccccccccccHHHHHHHHHHHccccEEEEEcHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHcccHHHHHHHHHHHHHHcEEEEEcccccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHEcccccccccccHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccEEEcHHcccccccEEEEEccccHHHHHHHHHHHHcccccccccccccccHHcccccccccccccccccccccccEEEEcccccEEccccccEEEEEEEcccEcccccccccccccccccccccccEEEEccccccccEEEEEEEEEEcccccccEEEEEEEEccccccccHHHHcccEEEEEccccEEEEEEEEccHHHHEEEcccccEEEccccEEEEEccccccEEEEEEEEEEEcc
MASTIAFFFLGLILLSAsssglaarepfacdpkdattrtlpfcqvslpipqrVNDLIGRLSLQEKVKLLISGAaavprlgikGYEWWSEALHgvsnvgpgtkfggdfpgatsfpqvITTASSFNATLWEAIGRVskqdiedtfdvpFRMCVMEGKVASVMCSYnqvngvptcadpnilkrtirgewrlngyivsdcdsvgvyydtqhftstpEEAAADAIRAgldldcgpflglhTESAVQRGLLSEIDINNALVNTLTVQMRlgmfdgepssqpyghlgpkdvctpdHQELALEAARQGIVLLknqgpslplshirhrtvavigpnsdvTVTMIGNYAgiacgyttplqgigrYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRaglllpgrqQELVSKVSMASKGPTILVLMSggpidvafakndpRIAAIIWagypgqaggtAIADIlfgtsnpggklpmtwypqeyitnlpmtemamrpsqskrypgrtyrfykgpvvypfghgmsytnfvhtvanaptvvavpldgrhgsinatISGKAIKVTHAKcnrltlgvqvdvknvgskdgahtllvfstppaghwaphkqlVAFEkvhvpagaqqrvgiNIHVCKYLSVvdrsgtrriplgehnihiggtkhSVSLHAATLGVIKS
MASTIAFFFLGLILLSASSSGLAAREPFACDPKDATTRtlpfcqvslpiPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVngvptcadpnilkrtirgewrlngyIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEhnihiggtkhsvslHAATLGVIKS
MASTiaffflglillsasssglaaREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFvhtvanaptvvavpLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVIKS
***TIAFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFD***************VCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPM************YPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGV***
***TIAFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVI**
MASTIAFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVIKS
*****AFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTV************NATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVIKS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASTIAFFFLGLILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATLGVIKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query677 2.2.26 [Sep-21-2011]
Q94KD8768 Probable beta-D-xylosidas yes no 0.816 0.720 0.728 0.0
Q9FGY1774 Beta-D-xylosidase 1 OS=Ar no no 0.796 0.696 0.647 0.0
P83344461 Putative beta-D-xylosidas N/A no 0.677 0.995 0.718 0.0
A5JTQ2774 Beta-xylosidase/alpha-L-a N/A no 0.805 0.704 0.534 1e-176
A5JTQ3774 Beta-xylosidase/alpha-L-a N/A no 0.797 0.697 0.522 1e-174
Q9FLG1784 Beta-D-xylosidase 4 OS=Ar no no 0.803 0.693 0.537 1e-174
Q9LXD6773 Beta-D-xylosidase 3 OS=Ar no no 0.825 0.723 0.506 1e-170
Q9LJN4781 Probable beta-D-xylosidas no no 0.802 0.695 0.480 1e-160
Q9LXA8792 Probable beta-D-xylosidas no no 0.802 0.685 0.450 1e-140
Q9SGZ5767 Probable beta-D-xylosidas no no 0.794 0.701 0.424 1e-134
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function desciption
 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/563 (72%), Positives = 480/563 (85%), Gaps = 10/563 (1%)

Query: 121 SSFNATLWEAIGR------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCAD 174
           ++++   W  + R      VSKQDIEDTFDVPFRMCV EG VAS+MCSYNQVNGVPTCAD
Sbjct: 210 TAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGNVASIMCSYNQVNGVPTCAD 269

Query: 175 PNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGL 234
           PN+LK+TIR +W LNGYIVSDCDSVGV YDTQH+T TPEEAAAD+I+AGLDLDCGPFLG 
Sbjct: 270 PNLLKKTIRNQWGLNGYIVSDCDSVGVLYDTQHYTGTPEEAAADSIKAGLDLDCGPFLGA 329

Query: 235 HTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELAL 294
           HT  AV++ LL E D++NAL+NTLTVQMRLGMFDG+ ++QPYGHLGP  VCTP H+ LAL
Sbjct: 330 HTIDAVKKNLLRESDVDNALINTLTVQMRLGMFDGDIAAQPYGHLGPAHVCTPVHKGLAL 389

Query: 295 EAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGR 354
           EAA+QGIVLLKN G SLPLS  RHRTVAVIGPNSD TVTMIGNYAG+ACGYT+P+QGI  
Sbjct: 390 EAAQQGIVLLKNHGSSLPLSSQRHRTVAVIGPNSDATVTMIGNYAGVACGYTSPVQGITG 449

Query: 355 YARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ 414
           YARTIHQ+GC DV C DD+LF AA++A+R ADAT+LVMGLDQSIEAE  DR  LLLPG+Q
Sbjct: 450 YARTIHQKGCVDVHCMDDRLFDAAVEAARGADATVLVMGLDQSIEAEFKDRNSLLLPGKQ 509

Query: 415 QELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGT 474
           QELVS+V+ A+KGP ILVLMSGGPID++FA+ D +I AI+WAGYPGQ GGTAIADILFG+
Sbjct: 510 QELVSRVAKAAKGPVILVLMSGGPIDISFAEKDRKIPAIVWAGYPGQEGGTAIADILFGS 569

Query: 475 SNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNF 534
           +NPGGKLPMTWYPQ+Y+TNLPMTEM+MRP  SKR PGRTYRFY GPVVYPFGHG+SYT F
Sbjct: 570 ANPGGKLPMTWYPQDYLTNLPMTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRF 629

Query: 535 VHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHT 594
            H +A+AP V+ + + GR+G    T+SGK+I+VTHA+C+RL+LGV V+V NVGS+DG HT
Sbjct: 630 THNIADAPKVIPIAVRGRNG----TVSGKSIRVTHARCDRLSLGVHVEVTNVGSRDGTHT 685

Query: 595 LLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEH 654
           +LVFS PP G WAP KQLVAFE+VHV  G ++RV +NIHVCKYLSVVDR+G RRIP+G+H
Sbjct: 686 MLVFSAPPGGEWAPKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDH 745

Query: 655 NIHIGGTKHSVSLHAATLGVIKS 677
            IHIG   H+VSL A+TLGVIKS
Sbjct: 746 GIHIGDESHTVSLQASTLGVIKS 768
May be involved in remodeling of xylans during vascular development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|P83344|XYNB_PRUPE Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
255548487768 Beta-glucosidase, putative [Ricinus comm 0.819 0.722 0.795 0.0
225437531768 PREDICTED: probable beta-D-xylosidase 2 0.800 0.705 0.790 0.0
356534827771 PREDICTED: probable beta-D-xylosidase 2- 0.821 0.721 0.761 0.0
356572781771 PREDICTED: probable beta-D-xylosidase 2- 0.822 0.722 0.753 0.0
356501877772 PREDICTED: probable beta-D-xylosidase 2- 0.821 0.720 0.757 0.0
357511337771 Beta-xylosidase [Medicago truncatula] gi 0.819 0.719 0.757 0.0
356503923775 PREDICTED: probable beta-D-xylosidase 2- 0.822 0.718 0.750 0.0
357442285765 Beta xylosidase [Medicago truncatula] gi 0.818 0.724 0.745 0.0
297843058763 hypothetical protein ARALYDRAFT_470222 [ 0.816 0.724 0.728 0.0
18378991768 beta-glucosidase [Arabidopsis thaliana] 0.816 0.720 0.728 0.0
>gi|255548487|ref|XP_002515300.1| Beta-glucosidase, putative [Ricinus communis] gi|223545780|gb|EEF47284.1| Beta-glucosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  952 bits (2462), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/563 (79%), Positives = 501/563 (88%), Gaps = 8/563 (1%)

Query: 121 SSFNATLWEAIGR------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCAD 174
           ++++   W  + R      VSKQD++DTFDVPFRMCV EGKVASVMCSYNQVNG+PTCAD
Sbjct: 208 TAYDLDNWNGVDRFHFNAKVSKQDMKDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCAD 267

Query: 175 PNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGL 234
           PN+L++T+R +W LNGYIVSDCDSVGV+YD QH+TSTPEEAAADAI+AGLDLDCGPFL +
Sbjct: 268 PNLLRKTVRTQWGLNGYIVSDCDSVGVFYDKQHYTSTPEEAAADAIKAGLDLDCGPFLAV 327

Query: 235 HTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELAL 294
           HT+ AV+RGL+SE D+N AL NTLTVQMRLGMFDGEPS+QPYG+LGPKDVCTP HQELAL
Sbjct: 328 HTQDAVKRGLISEADVNGALFNTLTVQMRLGMFDGEPSAQPYGNLGPKDVCTPAHQELAL 387

Query: 295 EAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGR 354
           EA RQGIVLLKN GPSLPLS  RHRTVA+IGPNS+VTVTMIGNYAG+AC YTTPLQGIG 
Sbjct: 388 EAGRQGIVLLKNHGPSLPLSPRRHRTVAIIGPNSNVTVTMIGNYAGVACQYTTPLQGIGS 447

Query: 355 YARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ 414
           YA+TIHQQGC DV C  DQLF  AIDA+RQADAT+LVMGLDQSIEAE  DR GLLLPGRQ
Sbjct: 448 YAKTIHQQGCADVGCVTDQLFSGAIDAARQADATVLVMGLDQSIEAEFRDRTGLLLPGRQ 507

Query: 415 QELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGT 474
           QELVSKV+MASKGPTILVLMSGGPIDV+FAK DP+IAAI+WAGYPGQAGG AIAD+LFGT
Sbjct: 508 QELVSKVAMASKGPTILVLMSGGPIDVSFAKKDPKIAAILWAGYPGQAGGAAIADVLFGT 567

Query: 475 SNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNF 534
            NPGGKLPMTWYPQEYITNLPMTEMAMR SQSK YPGRTYRFY+G VVYPFGHGMSYT+F
Sbjct: 568 INPGGKLPMTWYPQEYITNLPMTEMAMRSSQSKGYPGRTYRFYQGKVVYPFGHGMSYTHF 627

Query: 535 VHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHT 594
           VH +A+APT+V+VPLDG  G  N +ISGKAI+VTH KCN+L+LG+QVDVKNVGSKDG HT
Sbjct: 628 VHNIASAPTMVSVPLDGHRG--NTSISGKAIRVTHTKCNKLSLGIQVDVKNVGSKDGTHT 685

Query: 595 LLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEH 654
           LLV+S PPAG W+PHKQLVAFE+VHV AG Q+RVGI+IHVCK LSVVDRSG RRIP+GEH
Sbjct: 686 LLVYSAPPAGRWSPHKQLVAFERVHVSAGTQERVGISIHVCKLLSVVDRSGIRRIPIGEH 745

Query: 655 NIHIGGTKHSVSLHAATLGVIKS 677
           +IHIG  KHSVSL A  LGV+KS
Sbjct: 746 SIHIGNVKHSVSLQATVLGVVKS 768

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225437531|ref|XP_002270249.1| PREDICTED: probable beta-D-xylosidase 2 [Vitis vinifera] gi|297743965|emb|CBI36935.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356534827|ref|XP_003535953.1| PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356572781|ref|XP_003554544.1| PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356501877|ref|XP_003519750.1| PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|357511337|ref|XP_003625957.1| Beta-xylosidase [Medicago truncatula] gi|355500972|gb|AES82175.1| Beta-xylosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356503923|ref|XP_003520749.1| PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|357442285|ref|XP_003591420.1| Beta xylosidase [Medicago truncatula] gi|355480468|gb|AES61671.1| Beta xylosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297843058|ref|XP_002889410.1| hypothetical protein ARALYDRAFT_470222 [Arabidopsis lyrata subsp. lyrata] gi|297335252|gb|EFH65669.1| hypothetical protein ARALYDRAFT_470222 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18378991|ref|NP_563659.1| beta-glucosidase [Arabidopsis thaliana] gi|75250279|sp|Q94KD8.1|BXL2_ARATH RecName: Full=Probable beta-D-xylosidase 2; Short=AtBXL2; Flags: Precursor gi|14194121|gb|AAK56255.1|AF367266_1 At1g02640/T14P4_11 [Arabidopsis thaliana] gi|23506063|gb|AAN28891.1| At1g02640/T14P4_11 [Arabidopsis thaliana] gi|332189332|gb|AEE27453.1| beta-glucosidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
TAIR|locus:2196060768 BXL2 "beta-xylosidase 2" [Arab 0.799 0.704 0.739 5.3e-272
TAIR|locus:2157994774 BXL1 "beta-xylosidase 1" [Arab 0.781 0.683 0.660 3.1e-234
TAIR|locus:2174809784 XYL4 "beta-D-xylosidase 4" [Ar 0.802 0.692 0.529 4.1e-186
TAIR|locus:2144756773 BXL3 "AT5G09730" [Arabidopsis 0.825 0.723 0.499 2e-184
UNIPROTKB|P83344461 P83344 "Putative beta-D-xylosi 0.677 0.995 0.702 7.5e-176
TAIR|locus:2091236781 AT3G19620 [Arabidopsis thalian 0.784 0.679 0.485 6.6e-175
TAIR|locus:2029391767 AT1G78060 [Arabidopsis thalian 0.794 0.701 0.421 1.6e-156
TAIR|locus:2142434792 AT5G10560 [Arabidopsis thalian 0.800 0.684 0.449 1.7e-154
ASPGD|ASPL0000048081803 xlnD [Emericella nidulans (tax 0.765 0.645 0.348 2.1e-90
UNIPROTKB|Q5BAS1803 xlnD "Exo-1,4-beta-xylosidase 0.765 0.645 0.348 2.1e-90
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2175 (770.7 bits), Expect = 5.3e-272, Sum P(2) = 5.3e-272
 Identities = 403/545 (73%), Positives = 465/545 (85%)

Query:   133 RVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYI 192
             +VSKQDIEDTFDVPFRMCV EG VAS+MCSYNQVNGVPTCADPN+LK+TIR +W LNGYI
Sbjct:   228 KVSKQDIEDTFDVPFRMCVKEGNVASIMCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYI 287

Query:   193 VSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQRGLLSEIDINN 252
             VSDCDSVGV YDTQH+T TPEEAAAD+I+AGLDLDCGPFLG HT  AV++ LL E D++N
Sbjct:   288 VSDCDSVGVLYDTQHYTGTPEEAAADSIKAGLDLDCGPFLGAHTIDAVKKNLLRESDVDN 347

Query:   253 ALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLP 312
             AL+NTLTVQMRLGMFDG+ ++QPYGHLGP  VCTP H+ LALEAA+QGIVLLKN G SLP
Sbjct:   348 ALINTLTVQMRLGMFDGDIAAQPYGHLGPAHVCTPVHKGLALEAAQQGIVLLKNHGSSLP 407

Query:   313 LSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACADD 372
             LS  RHRTVAVIGPNSD TVTMIGNYAG+ACGYT+P+QGI  YARTIHQ+GC DV C DD
Sbjct:   408 LSSQRHRTVAVIGPNSDATVTMIGNYAGVACGYTSPVQGITGYARTIHQKGCVDVHCMDD 467

Query:   373 QLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILV 432
             +LF AA++A+R ADAT+LVMGLDQSIEAE  DR  LLLPG+QQELVS+V+ A+KGP ILV
Sbjct:   468 RLFDAAVEAARGADATVLVMGLDQSIEAEFKDRNSLLLPGKQQELVSRVAKAAKGPVILV 527

Query:   433 LMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYIT 492
             LMSGGPID++FA+ D +I AI+WAGYPGQ GGTAIADILFG++NPGGKLPMTWYPQ+Y+T
Sbjct:   528 LMSGGPIDISFAEKDRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDYLT 587

Query:   493 NLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGR 552
             NLPMTEM+MRP  SKR PGRTYRFY GPVVYPFGHG+SYT F              + GR
Sbjct:   588 NLPMTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVIPIAVRGR 647

Query:   553 HGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQL 612
             +G    T+SGK+I+VTHA+C+RL+LGV V+V NVGS+DG HT+LVFS PP G WAP KQL
Sbjct:   648 NG----TVSGKSIRVTHARCDRLSLGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQL 703

Query:   613 VAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHAATL 672
             VAFE+VHV  G ++RV +NIHVCKYLSVVDR+G RRIP+G+H IHIG   H+VSL A+TL
Sbjct:   704 VAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSLQASTL 763

Query:   673 GVIKS 677
             GVIKS
Sbjct:   764 GVIKS 768
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0046685 "response to arsenic-containing substance" evidence=RCA
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P83344 P83344 "Putative beta-D-xylosidase" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5BAS1 xlnD "Exo-1,4-beta-xylosidase xlnD" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94KD8BXL2_ARATH3, ., 2, ., 1, ., -0.72820.81680.7200yesno
P83344XYNB_PRUPE3, ., 2, ., 1, ., -0.71800.67790.9956N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.370.914
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
PLN03080779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 9e-63
PRK15098765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 1e-60
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 1e-34
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-25
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 2e-21
pfam1431071 pfam14310, Fn3-like, Fibronectin type III-like dom 6e-11
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 0.004
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score =  604 bits (1560), Expect = 0.0
 Identities = 258/558 (46%), Positives = 363/558 (65%), Gaps = 20/558 (3%)

Query: 122 SFNATLWEAIGRVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRT 181
           +FNA        V++QD+EDT+  PF+ C+ EGK + +MCSYNQVNGVP CA  ++L++ 
Sbjct: 232 TFNA-------VVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKA 284

Query: 182 IRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPFLGLHTESAVQ 241
            R EW   GYI SDCD+V   ++ Q +T +PE+A AD ++AG+D++CG ++  HT+SA++
Sbjct: 285 -RDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIE 343

Query: 242 RGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGI 301
           +G + E DI+ AL N  +VQ+RLG+FDG+P +  YG LGP +VCT +H+ELALEAARQGI
Sbjct: 344 KGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGI 403

Query: 302 VLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYA-RTIH 360
           VLLKN    LPL+     ++A+IGP ++    + G+Y G+ C  TT  +G+  Y  +T  
Sbjct: 404 VLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSF 463

Query: 361 QQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSK 420
             GCKDV+C  D  FG AI  +++AD  ++V GLD S E E  DR  LLLPG+Q +L+S 
Sbjct: 464 AAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISS 523

Query: 421 VSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGK 480
           V+  SK P +LVL  GGP+DV+FAK DPRIA+I+W GYPG+ GG A+A+I+FG  NPGG+
Sbjct: 524 VASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGR 583

Query: 481 LPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVAN 540
           LPMTWYP+ + T +PMT+M MR   S+ YPGRTYRFY G VVY FG+G+SYT F + + +
Sbjct: 584 LPMTWYPESF-TAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILS 642

Query: 541 APTVVAV----PLDGRHGSINATISGKAIKVTH----AKCNRLTLGVQVDVKNVGSKDGA 592
           AP  +++      D              +        A C  L   V + V NVG  DG+
Sbjct: 643 APKKLSLSRSSVQDSIS-RKPLLQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGS 701

Query: 593 HTLLVFS-TPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPL 651
           H +++FS +PP     P KQLV F++VH  +G      I +  CK+LSV +  G R +PL
Sbjct: 702 HVVMLFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVDPCKHLSVANEEGKRVLPL 761

Query: 652 GEHNIHIGGTKHSVSLHA 669
           G+H + +G  +HS+S+  
Sbjct: 762 GDHVLMLGDLEHSLSIEI 779

Length = 779
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 677
PLN03080779 Probable beta-xylosidase; Provisional 100.0
PRK15098765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 99.94
PF1431071 Fn3-like: Fibronectin type III-like domain; PDB: 3 99.81
PF07705101 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic 96.52
PF1063378 NPCBM_assoc: NPCBM-associated, NEW3 domain of alph 95.55
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 93.95
COG0486454 ThdF Predicted GTPase [General function prediction 90.53
PF14874102 PapD-like: Flagellar-associated PapD-like 90.43
COG1470 513 Predicted membrane protein [Function unknown] 82.3
PRK13202104 ureB urease subunit beta; Reviewed 81.69
PRK13203102 ureB urease subunit beta; Reviewed 81.5
cd00407101 Urease_beta Urease beta-subunit; Urease is a nicke 81.47
PF00699100 Urease_beta: Urease beta subunit CAUTION: The Pros 80.66
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-142  Score=1241.44  Aligned_cols=653  Identities=48%  Similarity=0.904  Sum_probs=563.4

Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhccCHHHHHHHhccCCCCCCCCCcccceecccccc
Q 005782           13 ILLSASSSGLAAREPFACDPKDATTRTLPFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGAAAVPRLGIKGYEWWSEALH   92 (677)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~ll~~mTleEKv~ql~~~~~~~~rlgip~~~~~~d~~~   92 (677)
                      +++++.....+..++.+|+.  .....+||||+++++++|+++||++||||||++||.+.+.+++|||||.++||+|++|
T Consensus        15 ~~~~~~~~~~~~~~~~~c~~--~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~h   92 (779)
T PLN03080         15 LALGATFKAADAHPQFPCKP--PTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLH   92 (779)
T ss_pred             HhcchhcccccCCCCcCCCC--ccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceeccccc
Confidence            33333333344467888963  4567799999999999999999999999999999999999999999999989999999


Q ss_pred             ceeecCCCcccCC-CCCCcccccccccccccCCHHHHHHHhc--------------------------------------
Q 005782           93 GVSNVGPGTKFGG-DFPGATSFPQVITTASSFNATLWEAIGR--------------------------------------  133 (677)
Q Consensus        93 G~~~~~~g~~~~~-~~~~~t~fP~~~~laat~d~~l~~~~g~--------------------------------------  133 (677)
                      |++..++|.++.+ ...++|.||++|++|||||++|++++|+                                      
T Consensus        93 Gv~~~~~g~~~~~g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~Et  172 (779)
T PLN03080         93 GLADNGPGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQET  172 (779)
T ss_pred             ccccCCCccccccCCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccC
Confidence            9988777777742 2457899999999999999999998775                                      


Q ss_pred             ----------------------------------------------------------------cCHHHHhccCCHHHHH
Q 005782          134 ----------------------------------------------------------------VSKQDIEDTFDVPFRM  149 (677)
Q Consensus       134 ----------------------------------------------------------------~~~~~l~e~~l~PF~~  149 (677)
                                                                                      +++++|+|+||+||++
T Consensus       173 fGEDP~lv~~~a~a~V~GlQ~~~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~  252 (779)
T PLN03080        173 PGEDPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKS  252 (779)
T ss_pred             cCCCHHHHHHHHHHHHHHhcCCCcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHH
Confidence                                                                            3558999999999999


Q ss_pred             HHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHHHHhCCCCCCc
Q 005782          150 CVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCG  229 (677)
Q Consensus       150 ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~  229 (677)
                      ||++|.+++||||||.+||+|||.|++||++ ||+||||+|+|||||++|..+...|+++.+.+|++++||+||+||+|.
T Consensus       253 ai~~g~~~~VM~sYn~vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~~~~~~~~~~~~~~ea~~~Al~AG~Dl~~~  331 (779)
T PLN03080        253 CIQEGKASCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMDINCG  331 (779)
T ss_pred             HHHhcCCeEEEeCCcCcCCccccCCHHHHHH-HHHHhCcCCeEecchHHHHHhhhcccccCCHHHHHHHHHHcCCCcccC
Confidence            9999988899999999999999999999986 999999999999999999999888888778899999999999999998


Q ss_pred             cchHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccCCHHHHHHHHHHhhcceEEeecCCC
Q 005782          230 PFLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGP  309 (677)
Q Consensus       230 ~~~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~~~~la~~~A~~sivLLKN~~~  309 (677)
                      .++.+.|.+||++|+|+|++||+||+|||++|+++|+|+.++...+|..+....+++++|+++|+|+|++|||||||+++
T Consensus       332 ~~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLKN~~~  411 (779)
T PLN03080        332 SYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKK  411 (779)
T ss_pred             chhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEecCCC
Confidence            77778999999999999999999999999999999999954433345544456788999999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEECcCCCccccccccccccCCccCCHHHHHhhce-eEEEecCcCccCCCChhhHHHHHHHhhcCCEE
Q 005782          310 SLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYA-RTIHQQGCKDVACADDQLFGAAIDASRQADAT  388 (677)
Q Consensus       310 ~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~~~~~~~t~~~~l~~~~-~v~y~~g~~~~~~~~~~~~~~a~~~a~~aD~v  388 (677)
                      +|||++.+.+||+||||+|+....++|+|++.+++.+|++++|+++. .+.|..||....+.+...+++|+++|++||+|
T Consensus       412 ~LPL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~aD~v  491 (779)
T PLN03080        412 FLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFV  491 (779)
T ss_pred             CCCCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhccCCEE
Confidence            99998765679999999999988888889988888999999999975 57899998655444566789999999999999


Q ss_pred             EEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCceeecccccCCCCccEEEEccCCCchhHHHHH
Q 005782          389 ILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIA  468 (677)
Q Consensus       389 Iv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AiA  468 (677)
                      ||++|.+...++|+.||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+.+.++++|||++|||||++|+|+|
T Consensus       492 Iv~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG~AiA  571 (779)
T PLN03080        492 VVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALA  571 (779)
T ss_pred             EEEeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccchhhhH
Confidence            99999999899999999999999999999999998777899999999999999998766789999999999999999999


Q ss_pred             HHHcCCCCCCcccccccccccccCCCCcccCCCCCCCCCCCCCCcccccCCCCcccccccccccCceeecccCCceeecc
Q 005782          469 DILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFVHTVANAPTVVAVP  548 (677)
Q Consensus       469 dvL~G~~nPsGkLPvT~~p~~~~~~~P~~~~~~~~~~~~~~~~~~Yr~~~~~~lypFG~GLSYT~F~ys~~~~~~~~~~~  548 (677)
                      |||||++|||||||+||||+++ .|+|++++++++++..+|++++||||+.+|+||||||||||||+|++++++..+.+.
T Consensus       572 dvLfG~vnPsGkLPvT~~p~~~-~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~~~~  650 (779)
T PLN03080        572 EIIFGDYNPGGRLPMTWYPESF-TAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKLSLS  650 (779)
T ss_pred             HHHcCCCCCCCcCeeeeccccc-ccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEecccccccccccc
Confidence            9999999999999999988887 579999888887777789999999999999999999999999999998754321111


Q ss_pred             CCC--C-CCccccccccc---ccccc-cccCCCeeEEEEEEEEecCCCCcceeEEEeecCCCC-CCCccccccccccccc
Q 005782          549 LDG--R-HGSINATISGK---AIKVT-HAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHV  620 (677)
Q Consensus       549 ~~~--~-~~~~~~~~~~~---~~~~~-~~~~~~~~~~v~v~V~NtG~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L  620 (677)
                      ...  . ...........   ..+.. ...|+...++|+|+|||||+++|+||||||+++|.+ ..+|+|||+||+||+|
T Consensus       651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF~kv~L  730 (779)
T PLN03080        651 RSSVQDSISRKPLLQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHT  730 (779)
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCcEeEee
Confidence            100  0 00000000000   00000 011222269999999999999999999999999876 5789999999999999


Q ss_pred             CCCCeEEEEEEeccCCCeeEEcCCCcEEeeCeEEEEEEeCCCceEEEEE
Q 005782          621 PAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHA  669 (677)
Q Consensus       621 ~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~ss~~~~~~~  669 (677)
                      +|||+++|+|+|+++++|++||++++|++|+|+|+|+||+++++++|++
T Consensus       731 ~~Ges~~V~~~l~~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~~  779 (779)
T PLN03080        731 ASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIEI  779 (779)
T ss_pred             CCCCEEEEEEEeCchHHceEEcCCCcEEEeCccEEEEEeCCccceEEeC
Confidence            9999999999999646899999999999999999999999999999864

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A Back     alignment and domain information
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins Back     alignment and domain information
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG0486 ThdF Predicted GTPase [General function prediction only] Back     alignment and domain information
>PF14874 PapD-like: Flagellar-associated PapD-like Back     alignment and domain information
>COG1470 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK13202 ureB urease subunit beta; Reviewed Back     alignment and domain information
>PRK13203 ureB urease subunit beta; Reviewed Back     alignment and domain information
>cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide Back     alignment and domain information
>PF00699 Urease_beta: Urease beta subunit CAUTION: The Prosite patterns do not match this subunit of the enzyme; InterPro: IPR002019 Urease 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
2x40_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 3e-25
2x42_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 2e-24
4i8d_A714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 8e-24
3zyz_A713 Crystal Structure Of A Glycoside Hydrolase Family 3 8e-24
3ac0_A845 Crystal Structure Of Beta-Glucosidase From Kluyvero 3e-23
3abz_A845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 6e-23
3rrx_A822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 4e-15
3usz_A822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 4e-15
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 5e-15
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 9e-14
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 5e-14
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 6e-14
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 1e-06
4gyj_A648 Crystal Structure Of Mutant (D318n) Bacillus Subtil 3e-06
3lk6_A616 Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro 4e-06
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure 
Iteration: 1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 243/598 (40%), Gaps = 135/598 (22%)
Query: 134 VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIV 193
           VS++ + + +   F + V + K  SVM +YN++NG     +  +LK+ +R EW   G+++
Sbjct: 181 VSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVM 240
Query: 194 SDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDC-GPFLGLHTE---------SAVQRG 243
           SD           +    P     + ++AG DL   G    ++TE          A++ G
Sbjct: 241 SDW----------YAGDNP----VEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEG 286
Query: 244 LLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVL 303
            LSE  ++  + N L V +        PS + Y +    D+    H ++A EA  +G+VL
Sbjct: 287 KLSEEVLDECVRNILKVLVNA------PSFKNYRYSNKPDL--EKHAKVAYEAGAEGVVL 338
Query: 304 LKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTP------LQGIGRYAR 357
           L+N+  +LPLS   +  +A+ G     T+       G   G T P      L+GI     
Sbjct: 339 LRNE-EALPLSE--NSKIALFGTGQIETIK-----GGTGSGDTHPRYAISILEGIKERGL 390
Query: 358 TIHQQGCKDVACADDQL------------FGAAID---------------ASRQADATIL 390
              ++  K       ++            +G  I                 +++ D  ++
Sbjct: 391 NFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVI 450
Query: 391 VMGLDQSIEAEALDR----AGLLLPGRQQELVSKVS--MASKGPTILVLMS-GGPIDVAF 443
           V+     I  E  DR        L   + +L+  VS     +G  ++VL++ G P++V  
Sbjct: 451 VIS---RISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVS 507
Query: 444 AKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRP 503
            ++      ++W    GQ  G  +AD+L G  NP GKLP T +P++Y +++P       P
Sbjct: 508 WRDLVDGILLVWQA--GQETGRIVADVLTGRINPSGKLPTT-FPRDY-SDVPSWTF---P 560
Query: 504 SQSKRYPGRT---------YRFYKGPVV---YPFGHGMSYTNFXXXXXXXXXXXXXXLDG 551
            + K  P +          YR+Y    V   Y FG+G+SYT F                 
Sbjct: 561 GEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTF----------------- 603
Query: 552 RHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHW-APHK 610
            +  +N +  G+            TL VQ  ++N G + G     V+   P G    P +
Sbjct: 604 EYSDLNVSFDGE------------TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQ 651
Query: 611 QLVAFEKVH-VPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSL 667
           +L AF K   +  G  + V + I V    S         +  GE+ + +G +  ++ L
Sbjct: 652 ELKAFHKTRLLNPGESEEVVLEIPVRDLASFNGEEWV--VEAGEYEVRVGASSRNIKL 707
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure
>pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 Back     alignment and structure
>pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-111
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 5e-11
3rrx_A822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 3e-91
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 9e-05
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-86
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 9e-08
3abz_A845 Beta-glucosidase I; glycoside hydrolase family3 be 1e-54
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 5e-45
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 4e-14
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 5e-31
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 3e-14
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 3e-06
4g6c_A342 Beta-hexosaminidase 1; ssgcid, niaid, structural g 2e-04
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  350 bits (901), Expect = e-111
 Identities = 119/571 (20%), Positives = 200/571 (35%), Gaps = 119/571 (20%)

Query: 146 PFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDT 205
            F + V + K  SVM +YN++NG     +  +LK+ +R EW   G+++SD  +       
Sbjct: 193 GFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAG------ 246

Query: 206 QHFTSTPEEAAADAIRAGLDLDCG----------PFLGLHTESAVQRGLLSEIDINNALV 255
                   +   + ++AG DL                      A++ G LSE  ++  + 
Sbjct: 247 --------DNPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVR 298

Query: 256 NTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSH 315
           N L V +    F     S               H ++A EA  +G+VLL+N+  +LPLS 
Sbjct: 299 NILKVLVNAPSFKNYRYSNKPD--------LEKHAKVAYEAGAEGVVLLRNEE-ALPLS- 348

Query: 316 IRHRTVAVIGPNSDVTVTMIGNYAGIACGYT-TPLQGIGRYARTI--------------- 359
             +  +A+ G     T+            Y  + L+GI                      
Sbjct: 349 -ENSKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKM 407

Query: 360 ------------HQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAG 407
                            K     +          +++ D  ++V+        E  DR  
Sbjct: 408 RETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRISG---EGYDRKP 464

Query: 408 ----LLLPGRQQELVSKVSMASKG---PTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPG 460
                 L   + +L+  VS          I++L  G P++V   ++      I+     G
Sbjct: 465 VKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVSWRDLV--DGILLVWQAG 522

Query: 461 QAGGTAIADILFGTSNPGGKLPMTW------YPQEYITNLPMTEMAMRPSQSKRYPGRTY 514
           Q  G  +AD+L G  NP GKLP T+       P       P         +   Y G  Y
Sbjct: 523 QETGRIVADVLTGRINPSGKLPTTFPRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVG--Y 580

Query: 515 RFY---KGPVVYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAK 571
           R+Y        Y FG+G+SYT F ++                   +  +S     +    
Sbjct: 581 RYYDTFGVEPAYEFGYGLSYTTFEYS-------------------DLNVSFDGETLR--- 618

Query: 572 CNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWA-PHKQLVAFEKVHV-PAGAQQRVG 629
                  VQ  ++N G + G     V+   P G    P ++L AF K  +   G  + V 
Sbjct: 619 -------VQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVV 671

Query: 630 INIHVCKYLSVVDRSGTRRIPLGEHNIHIGG 660
           + I V + L+  +      +  GE+ + +G 
Sbjct: 672 LEIPV-RDLASFN-GEEWVVEAGEYEVRVGA 700
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
3abz_A845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3zyz_A713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3rrx_A822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 99.96
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 99.96
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 99.95
3idu_A127 Uncharacterized protein; all beta-protein, structu 97.01
2l0d_A114 Cell surface protein; structural genomics, northea 96.29
2kut_A122 Uncharacterized protein; structural genomics, PSI- 95.15
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 91.83
4ep8_B101 Urease subunit beta; alpha-beta barrel, nickel met 84.98
1w8o_A 601 Bacterial sialidase; 3D-structure, glycosidase, hy 83.96
2x3c_A 343 Toxic extracellular endopeptidase; hydrolase; 1.99 80.93
4ubp_B126 Protein (urease (chain B)); bacillus pasteurii, ni 80.66
4ac7_B126 Urease subunit beta; hydrolase, bacillus pasteurii 80.66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-125  Score=1110.80  Aligned_cols=554  Identities=28%  Similarity=0.436  Sum_probs=475.5

Q ss_pred             HHHHHHHHhccCHHHHHHHhcc----CCCCCCCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCH
Q 005782           50 PQRVNDLIGRLSLQEKVKLLIS----GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA  125 (677)
Q Consensus        50 ~~rv~~ll~~mTleEKv~ql~~----~~~~~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~  125 (677)
                      +.|+++||++||||||++||.+    .+.+++|+|||.+ +++|++||++    +.++.. ..++|.||+++++|||||+
T Consensus         3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~   76 (845)
T 3abz_A            3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR   76 (845)
T ss_dssp             CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred             HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence            3589999999999999999986    4678999999999 7899999986    233321 1248999999999999999


Q ss_pred             HHHHHHhc------------------------------------------------------------------------
Q 005782          126 TLWEAIGR------------------------------------------------------------------------  133 (677)
Q Consensus       126 ~l~~~~g~------------------------------------------------------------------------  133 (677)
                      +|++++|+                                                                        
T Consensus        77 ~l~~~~g~~~g~E~ra~Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~gV~a~~KHFpg~g~e~~  156 (845)
T 3abz_A           77 DLLETAGKLMAKESIAKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEGIAATVKHFVCNDLEDQ  156 (845)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHTTCBCEEEEETTCCCCTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhCCeeEEeeccccCCcccC
Confidence            99999986                                                                        


Q ss_pred             -------cCHHHHhccCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccc
Q 005782          134 -------VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQ  206 (677)
Q Consensus       134 -------~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~  206 (677)
                             +++++|+|+||+||+++|+++.+++||||||.+||+|||+|++||++|||+||||+|+|||||++|.      
T Consensus       157 r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------  230 (845)
T 3abz_A          157 RFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------  230 (845)
T ss_dssp             TTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------
T ss_pred             CccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------
Confidence                   8999999999999999997444679999999999999999999999999999999999999998763      


Q ss_pred             cccCCHHHHHHHHHHhCCCCCCcc---chH-HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCC
Q 005782          207 HFTSTPEEAAADAIRAGLDLDCGP---FLG-LHTESAVQRGL-LSEIDINNALVNTLTVQMRLG----MFDGEPSSQPYG  277 (677)
Q Consensus       207 ~~~~~~~ea~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-i~~~~id~av~RIL~~k~~~G----lf~~~p~~~~~~  277 (677)
                              ++++|++||+||+|+.   ++. +.|.+||++|+ +++++||+||+|||++|+++|    +|+. |.    .
T Consensus       231 --------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~~-p~----~  297 (845)
T 3abz_A          231 --------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTGI-VE----N  297 (845)
T ss_dssp             --------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHCC-CT----T
T ss_pred             --------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCccccccC-Cc----c
Confidence                    2478999999999962   223 38999999999 999999999999999999999    8883 32    2


Q ss_pred             CCCCCccCCHHHHHHHHHHhhcceEEeecCCCCCCCCCCCCCeEEEECcCCCccccccccccc-cCCccCCHHHHHhhce
Q 005782          278 HLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG-IACGYTTPLQGIGRYA  356 (677)
Q Consensus       278 ~~~~~~v~~~~~~~la~~~A~~sivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~g~~~~-~~~~~~t~~~~l~~~~  356 (677)
                      ......+++++|+++|+++|++|||||||++++|||++  .+||+||||+|+....++|+|.. .+.+.+||++||+++.
T Consensus       298 ~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~  375 (845)
T 3abz_A          298 GPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKL  375 (845)
T ss_dssp             CCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHH
T ss_pred             CccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhh
Confidence            11122377999999999999999999999999999986  47999999999998776666654 5778999999999874


Q ss_pred             --eEEEecCcCcc------------------------------------C------------------------------
Q 005782          357 --RTIHQQGCKDV------------------------------------A------------------------------  368 (677)
Q Consensus       357 --~v~y~~g~~~~------------------------------------~------------------------------  368 (677)
                        .+.|..||...                                    .                              
T Consensus       376 ~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  455 (845)
T 3abz_A          376 GKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPK  455 (845)
T ss_dssp             TSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTT
T ss_pred             cCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeeccccccccccc
Confidence              46666655200                                    0                              


Q ss_pred             -----------------------------------------------------------------------------C--
Q 005782          369 -----------------------------------------------------------------------------C--  369 (677)
Q Consensus       369 -----------------------------------------------------------------------------~--  369 (677)
                                                                                                   .  
T Consensus       456 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~  535 (845)
T 3abz_A          456 NPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGS  535 (845)
T ss_dssp             BCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEEC
T ss_pred             ccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEecc
Confidence                                                                                         0  


Q ss_pred             ----------------------CC-hhhHHHHHHHhhcCCEEEEEecCCCcccccccccCCCCCCHHHHHHHHHHHhhCC
Q 005782          370 ----------------------AD-DQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASK  426 (677)
Q Consensus       370 ----------------------~~-~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~  426 (677)
                                            .+ ...+++|+++|++||+||||+|.+..+++||.||.+|.||+.|++||++|++++ 
T Consensus       536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~~-  614 (845)
T 3abz_A          536 GPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKAN-  614 (845)
T ss_dssp             TTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHHC-
T ss_pred             CCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHhC-
Confidence                                  00 135788999999999999999999999999999999999999999999999864 


Q ss_pred             CCEEEEEecCceeecccccCCCCccEEEEccCCCchhHHHHHHHHcCCCCCCcccccccccccccCCCCcccCCCCC-CC
Q 005782          427 GPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRP-SQ  505 (677)
Q Consensus       427 ~pvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AiAdvL~G~~nPsGkLPvT~~p~~~~~~~P~~~~~~~~-~~  505 (677)
                      +|||||+++|+|++|+|++   +++|||++||||||+|+||||||||++|||||||+|| |++. +|+|.+++ +.. ..
T Consensus       615 ~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~~-~~~~~g  688 (845)
T 3abz_A          615 PNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFLN-FKTEFG  688 (845)
T ss_dssp             SCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTTS-CSCBTT
T ss_pred             CCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCcccc-CCCCCC
Confidence            6899999999999999984   7999999999999999999999999999999999998 6775 56897543 211 10


Q ss_pred             CCCCCC---CcccccC---CCCcccccccccccCceee--cccCCceeeccCCCCCCcccccccccccccccccCCCeeE
Q 005782          506 SKRYPG---RTYRFYK---GPVVYPFGHGMSYTNFVHT--VANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTL  577 (677)
Q Consensus       506 ~~~~~~---~~Yr~~~---~~~lypFG~GLSYT~F~ys--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (677)
                      ...|.+   .+||||+   .+|+||||||||||||+|+  +++++                               ++.+
T Consensus       689 ~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~-------------------------------~~~~  737 (845)
T 3abz_A          689 RVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT-------------------------------DDKI  737 (845)
T ss_dssp             EEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC-------------------------------SSEE
T ss_pred             ceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccccc-------------------------------CCeE
Confidence            111221   3599997   5799999999999999999  98721                               1368


Q ss_pred             EEEEEEEecC-CCCcceeEEEeecCCCC-CCCcccccccccccccCCCCeEEEEEEec-cCCCeeEEcCC-CcEEeeCeE
Q 005782          578 GVQVDVKNVG-SKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHVPAGAQQRVGINIH-VCKYLSVVDRS-GTRRIPLGE  653 (677)
Q Consensus       578 ~v~v~V~NtG-~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~e~G~  653 (677)
                      +|+|+||||| +++|+||||||+++|.+ ..+|.|+||||+||+|+||||++|+|+|+ . ++|++||.. ++|++|+|+
T Consensus       738 ~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~  816 (845)
T 3abz_A          738 AISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGE  816 (845)
T ss_dssp             EEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEE
T ss_pred             EEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCE
Confidence            9999999999 99999999999999987 57899999999999999999999999999 8 799999996 789999999


Q ss_pred             EEEEEeCCCceEEEEE
Q 005782          654 HNIHIGGTKHSVSLHA  669 (677)
Q Consensus       654 y~i~vG~ss~~~~~~~  669 (677)
                      |+|+||.||+++++..
T Consensus       817 y~v~vG~ss~di~l~~  832 (845)
T 3abz_A          817 YLVSVGTSSDDILSVK  832 (845)
T ss_dssp             EEEEEESSTTCEEEEE
T ss_pred             EEEEEECCCCCceeEE
Confidence            9999999999987654
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A Back     alignment and structure
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans} Back     alignment and structure
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens} Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A Back     alignment and structure
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B* Back     alignment and structure
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 677
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 6e-27
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 1e-21
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 3e-07
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 5e-08
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Beta-D-glucan exohydrolase, C-terminal domain
family: Beta-D-glucan exohydrolase, C-terminal domain
domain: Beta-D-glucan exohydrolase, C-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  106 bits (266), Expect = 6e-27
 Identities = 49/237 (20%), Positives = 76/237 (32%), Gaps = 30/237 (12%)

Query: 301 IVLLKNQ-----GPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRY 355
           +VLLKN       P LPL   +   + V G ++D      G +     G T         
Sbjct: 1   LVLLKNGKTSTDAPLLPLPK-KAPKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTI 59

Query: 356 ARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQ 415
              +             +   A    S      I+ +G     E +  +    + P    
Sbjct: 60  LEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYAIVAVGEHPYTETKGDNLNLTI-PEPGL 118

Query: 416 ELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTS 475
             V  V          VL+SG P+ V          A++ A  PG   G  + D LFG  
Sbjct: 119 STVQAVCGGV--RCATVLISGRPVVVQ--PLLAASDALVAAWLPGS-EGQGVTDALFGDF 173

Query: 476 NPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYT 532
              G+LP TW+  + +  LPM                    Y    ++  G+G++  
Sbjct: 174 GFTGRLPRTWF--KSVDQLPMN--------------VGDAHYD--PLFRLGYGLTTN 212
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 99.89
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 96.4
d2q3za2114 Transglutaminase, two C-terminal domains {Human (H 88.41
d4ubpb_122 Urease, beta-subunit {Bacillus pasteurii [TaxId: 1 88.05
d1ejxb_101 Urease, beta-subunit {Klebsiella aerogenes [TaxId: 85.86
d1e9ya1133 Urease, beta-subunit {Helicobacter pylori [TaxId: 83.95
d1ex0a2112 Transglutaminase, two C-terminal domains {Human (H 83.41
d1vjja2115 Transglutaminase, two C-terminal domains {Human (H 82.09
d1g0da2112 Transglutaminase, two C-terminal domains {Red sea 80.71
d2vzsa2122 Exochitosanase CsxA, domains 2, 4 and 5 {Amycolato 80.63
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=3.1e-49  Score=428.66  Aligned_cols=243  Identities=26%  Similarity=0.448  Sum_probs=209.8

Q ss_pred             CC-CCCCCCCHHHHHHHHHhccCHHHHHHHhccC---------------------CCC----------------------
Q 005782           40 LP-FCQVSLPIPQRVNDLIGRLSLQEKVKLLISG---------------------AAA----------------------   75 (677)
Q Consensus        40 ~~-~~~~~~~~~~rv~~ll~~mTleEKv~ql~~~---------------------~~~----------------------   75 (677)
                      +| |+|+++|+++||++||++|||||||+||.+.                     ...                      
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            56 9999999999999999999999999998531                     011                      


Q ss_pred             -CCCCCcccceeccccccceeecCCCcccCCCCCCcccccccccccccCCHHHHHHHhc---------------------
Q 005782           76 -VPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGR---------------------  133 (677)
Q Consensus        76 -~~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~---------------------  133 (677)
                       ..|+|||++ +..|+++|+...          .+.|.||+++++|||||++|++++|+                     
T Consensus        82 ~~~~~giPll-i~~D~e~G~~~~----------~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv  150 (388)
T d1x38a1          82 MSTRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAV  150 (388)
T ss_dssp             HTSSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCC
T ss_pred             HhccCCCCce-eecccccCcccc----------cccccchhhhhccccCCHHHHHHHHHHhhHHHHhcCCccccCCcccc
Confidence             247789988 789999986422          24789999999999999999999886                     


Q ss_pred             --------------------------------------------------------------------------cCHHHH
Q 005782          134 --------------------------------------------------------------------------VSKQDI  139 (677)
Q Consensus       134 --------------------------------------------------------------------------~~~~~l  139 (677)
                                                                                                +++++|
T Consensus       151 ~~~p~~gr~~et~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l  230 (388)
T d1x38a1         151 CRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGL  230 (388)
T ss_dssp             CSCTTSTTGGGSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHH
T ss_pred             cccccccccccCccCCHHHHHHHHhhhhhhhchhhhhhcccccccccccCcceeeeeeecCCccccCccccccchhHHHH
Confidence                                                                                      889999


Q ss_pred             hccCCHHHHHHHHcCCcceEEeeccccCCcccccCHHHHHHHhhcccccCcEEEcCCcccccccccccccCCHHHHHHHH
Q 005782          140 EDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADA  219 (677)
Q Consensus       140 ~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~VvSD~~~m~~~~~~~~~~~~~~ea~~~a  219 (677)
                      +|+||+||+++|++|. .+|||+||.+||+|+|.|+++|+++||+||||+|+|||||++|.++...  +.....++.+.+
T Consensus       231 ~~~~l~pf~~~i~~g~-~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~--~~~~~~~~~~~a  307 (388)
T d1x38a1         231 MNIHMPAYKNAMDKGV-STVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTP--AGSDYSYSVKAS  307 (388)
T ss_dssp             HHHTSHHHHHHHHTTC-CEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSS--TTTTHHHHHHHH
T ss_pred             HHHhhhhhHHHHhhcc-ccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhccccccc--cCCcHHHHHHHH
Confidence            9999999999999885 5999999999999999999999999999999999999999999988643  333567888999


Q ss_pred             HHhCCCCCCcc----chHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccCCHHHHHHHHH
Q 005782          220 IRAGLDLDCGP----FLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALE  295 (677)
Q Consensus       220 l~AG~D~~~~~----~~~~~l~~av~~g~i~~~~id~av~RIL~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~~~~la~~  295 (677)
                      ++||+||.|.+    .+.+.|.+||++|+|++++||+||+|||++|+++|||| +|...|.   ....+++++|+++|++
T Consensus       308 ~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-~p~~~~~---~~~~i~~~~h~~~a~~  383 (388)
T d1x38a1         308 ILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADPA---MAEQLGKQEHRDLARE  383 (388)
T ss_dssp             HHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCGG---GGGGTTCHHHHHHHHH
T ss_pred             HhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCChh---hhhhcCCHHHHHHHHH
Confidence            99999998753    34578999999999999999999999999999999999 4432221   1245789999999999


Q ss_pred             Hhhcc
Q 005782          296 AARQG  300 (677)
Q Consensus       296 ~A~~s  300 (677)
                      +|+||
T Consensus       384 aA~~S  388 (388)
T d1x38a1         384 AARKS  388 (388)
T ss_dssp             HHHHH
T ss_pred             HHhcC
Confidence            99997
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} Back     information, alignment and structure
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} Back     information, alignment and structure
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} Back     information, alignment and structure
>d1e9ya1 b.85.3.1 (A:106-238) Urease, beta-subunit {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} Back     information, alignment and structure
>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]} Back     information, alignment and structure
>d2vzsa2 b.1.4.1 (A:778-899) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure