Citrus Sinensis ID: 005783

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSKSGRKKCSRGAAKSQILV
cccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccEEEccccccccccccccccEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHcccHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccHHHHccccccccEEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccccccccc
cccEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccEEEcccccccccEEEEcccccccEcccccccccccccccEEEEccccccEEEEEEccHHccccccccEEEEcccccccEEEEccccccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEccccEEEEEEccccccccccHcHHEHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcHccccccccccccEEEEEEEEcccccccEEEcccccHcHEcccccccHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHccccHHcccccccccccHHHHHHccccccEEEEccccccccEHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHcccccccEccHHHHHHHHHHHHHHHHHHHHHHcHHHccEEEccccHHHHHHHHHEccccccccccccccccEEEc
mnsinllgnstmklsgrflipcrnasfSAFIVikhpnhhclsnksstfcfkfdqinqiqahpykisgfQRILkdtqkplcvfgpscgqirvnsrpfsvvstksrGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQnglnvkplvveridkdenivgqeescvevnddekvgkdnlegvrtkreETEIEKEAWRLLQEAVVTYCespigtvaandpgdkqplnydqvfIRDFVPSALAFLLKGEGEIVRNFLLHTLQlqswektvdcyspgqglmpasfkvrnvplesnkfeevldpdfgesaigrvapvdsgLWWIILLRAYGKitgdyalqeRVDVQTGIKLIMNLCladgfdmfpsllvtdgscmidrrmgihghpLEIQALFYTALRCsremltvsdgsgsnnLVRAINNRLSALSFHIREYYWVDMKKINEIYRYkteeystdatnkfniypeqipswlmdwipeeggylignlqpahmdfrFFTLGNLWSIVSslgtpkqnESILNLIEAKWddlvghmplkicypalesedwriitgsdpkntpwsyhnggswptLLWQFTLACIKMGRLGLAQKAVALAEnrlpldhwpeyydtrtgrftgkqsrLFQTWTIAGFLTskmlvenpemasvlfWEEDYELLEICVCALsksgrkkcsrgaaksqilv
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFgpscgqirvnsrpfsvvsTKSRGLYLVASrvasnvssfstsvetrvndgNFERIyvqnglnvkplvveridkdenivgqeescvevnddekvgkdnlegvrtkreeteiekEAWRLLQEAVVTYCESPIGtvaandpgdkQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGrvapvdsglWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTvsdgsgsnnLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTeeystdatnkFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAenrlpldhwPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCAlsksgrkkcsrgaaksqilv
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVrtkreeteiekeAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSKSGRKKCSRGAAKSQILV
**********TMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVG********************************KEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALS******************
****NL*GNSTMKLSGRFLIPCRNASFSAFIVI*********************INQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQI********************************************************************************************************EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEI********************QILV
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSK*****************
*NSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKD*********************************TEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSK*****************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCALSKSGRKKCSRGAAKSQILV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
375300672682 neutral/alkaline invertase [Manihot escu 0.977 0.970 0.769 0.0
255542946685 beta-fructofuranosidase, putative [Ricin 0.989 0.978 0.764 0.0
449490800601 PREDICTED: uncharacterized LOC101218389 0.867 0.976 0.838 0.0
449454129589 PREDICTED: uncharacterized protein LOC10 0.836 0.960 0.855 0.0
359487679673 PREDICTED: uncharacterized protein LOC10 0.983 0.989 0.764 0.0
163913884674 putative neutral invertase [Vitis vinife 0.983 0.988 0.763 0.0
163913886674 putative neutral invertase [Vitis vinife 0.983 0.988 0.762 0.0
147773544673 hypothetical protein VITISV_029106 [Viti 0.985 0.991 0.746 0.0
225432057673 PREDICTED: uncharacterized protein LOC10 0.985 0.991 0.746 0.0
153850908673 neutral invertase [Vitis vinifera] 0.985 0.991 0.746 0.0
>gi|375300672|gb|AFA46813.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
 Score = 1073 bits (2776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/697 (76%), Positives = 584/697 (83%), Gaps = 35/697 (5%)

Query: 1   MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQA 60
           M ++  L NSTMK S RFLI  R      F   K+  HH L+   S     FD   Q   
Sbjct: 1   MATLIFLSNSTMKPSCRFLITRRTPGI--FGSAKY--HHTLTGDISRNEISFDHNKQFSE 56

Query: 61  HPYKISGFQRILKDTQKPLCV----FGP-------SCGQIRVNSRPFSVVSTKSRGLYLV 109
           +P+   GF+ I+  TQK  C+    FGP       SCG  R   R        SRG+ +V
Sbjct: 57  YPFGFFGFRSIINSTQKIFCIPIANFGPPRLVSGSSCGD-RTRRR-------ASRGVSVV 108

Query: 110 ASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEV- 168
           AS VAS V  +STSVETRVND NFERIYV NG+ VKPLVVE+IDKDE+++G+  S + V 
Sbjct: 109 AS-VASEVKEYSTSVETRVNDKNFERIYVHNGIGVKPLVVEKIDKDEDVLGEAASRIGVV 167

Query: 169 --NDDEKVGKDNLEGVR------TKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPG 220
             ++ EKV  +NLEGV+      + REE+EIEKEAW+LL +A+VTYC SP+GTVAAND G
Sbjct: 168 VPDEGEKVNTENLEGVKGVEIGNSWREESEIEKEAWKLLNDAIVTYCGSPVGTVAANDQG 227

Query: 221 DKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA 280
           DKQPLNYDQVFIRDFVPSALAFLL+GEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA
Sbjct: 228 DKQPLNYDQVFIRDFVPSALAFLLRGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA 287

Query: 281 SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD 340
           SFKVR VPL+ NK EEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGD  LQERVD
Sbjct: 288 SFKVRTVPLDGNKSEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDNTLQERVD 347

Query: 341 VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREML 400
           VQ GIKLI+NLCL DGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFY+ALRCSREML
Sbjct: 348 VQIGIKLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREML 407

Query: 401 TVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYP 460
           TV+DGS   NLVR INNRLSALSFHIREYYWVD+KKINEIYRYKTEEYS DATNKFNIYP
Sbjct: 408 TVNDGS--KNLVRTINNRLSALSFHIREYYWVDIKKINEIYRYKTEEYSMDATNKFNIYP 465

Query: 461 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAK 520
           EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS++SSLGTPKQN++ILNLIEAK
Sbjct: 466 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSVISSLGTPKQNKAILNLIEAK 525

Query: 521 WDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRL 580
           WDDLVG MPLKICYPALE EDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRL
Sbjct: 526 WDDLVGRMPLKICYPALEDEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRL 585

Query: 581 GLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMAS 640
            LAQKAVALAE RL +DHWPEYYDTRTG+F GKQSRL+QTWTIAGFLTSK+L+ENP+MAS
Sbjct: 586 ELAQKAVALAEERLAVDHWPEYYDTRTGKFIGKQSRLYQTWTIAGFLTSKVLLENPQMAS 645

Query: 641 VLFWEEDYELLEICVCALSKSGRKKCSRGAAKSQILV 677
           +L WEEDYELLEICVCALSK+GRKKCSRGAAK+QILV
Sbjct: 646 MLLWEEDYELLEICVCALSKTGRKKCSRGAAKTQILV 682

Source: Manihot esculenta

Species: Manihot esculenta

Genus: Manihot

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255542946|ref|XP_002512536.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223548497|gb|EEF49988.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449490800|ref|XP_004158710.1| PREDICTED: uncharacterized LOC101218389 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454129|ref|XP_004144808.1| PREDICTED: uncharacterized protein LOC101218389 [Cucumis sativus] Back     alignment and taxonomy information
>gi|359487679|ref|XP_002277312.2| PREDICTED: uncharacterized protein LOC100254513 [Vitis vinifera] Back     alignment and taxonomy information
>gi|163913884|emb|CAP59645.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|163913886|emb|CAP59646.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147773544|emb|CAN63178.1| hypothetical protein VITISV_029106 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432057|ref|XP_002280462.1| PREDICTED: uncharacterized protein LOC100233037 [Vitis vinifera] gi|296083207|emb|CBI22843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|153850908|gb|ABS52644.1| neutral invertase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
TAIR|locus:2074434659 INVH "invertase H" [Arabidopsi 0.821 0.843 0.772 9.2e-246
TAIR|locus:2027600616 A/N-InvA "alkaline/neutral inv 0.710 0.780 0.863 1.2e-243
TAIR|locus:2084329664 A/N-InvC "alkaline/neutral inv 0.960 0.978 0.656 7.5e-231
TAIR|locus:2171112617 INV-E "alkaline/neutral invert 0.703 0.771 0.730 1.3e-196
TAIR|locus:2116870571 A/N-InvB "alkaline/neutral inv 0.664 0.788 0.583 8.5e-152
TAIR|locus:2133737558 CINV2 "cytosolic invertase 2" 0.666 0.808 0.576 3e-149
TAIR|locus:2014676551 CINV1 "cytosolic invertase 1" 0.661 0.813 0.589 4.3e-148
TAIR|locus:2199690534 A/N-InvD "alkaline/neutral inv 0.661 0.838 0.578 6.4e-147
TAIR|locus:2016064499 A/N-InvF "alkaline/neutral inv 0.661 0.897 0.571 8.4e-145
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2339 (828.4 bits), Expect = 9.2e-246, Sum P(2) = 9.2e-246
 Identities = 442/572 (77%), Positives = 490/572 (85%)

Query:   109 VASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEV 168
             V ++V S   S S S  T  ND   ++IY +NGLNVKPLVVER+ +DE     EE+   V
Sbjct:   101 VTAQVVSEARSHSAST-TCANDTTLDQIYTKNGLNVKPLVVERLKRDEK---DEEA---V 153

Query:   169 NDDEK-VGKDNLEGVXXXXXXXXXXXXAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNY 227
             N+DE+ V +D  EGV            AWRLL++++VTYC+SP+GTVAA DP D  P NY
Sbjct:   154 NEDEEGVKRDGFEGVKCNDVEEE----AWRLLRDSIVTYCDSPVGTVAAKDPTDTTPSNY 209

Query:   228 DQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNV 287
             DQVFIRDFVPSALAFLLKGE EIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVR +
Sbjct:   210 DQVFIRDFVPSALAFLLKGESEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTL 269

Query:   288 PLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKL 347
             PLE +KFEEVLDPDFGE+AIGRVAPVDSGLWWIILLRAYGKITGDY+LQER+DVQTGIK+
Sbjct:   270 PLEEDKFEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERIDVQTGIKM 329

Query:   348 IMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSG 407
             I NLCLADGFDMFP+LLVTDGSCMIDRRMGIHGHPLEIQALFY+ALR SREM+TV+D S 
Sbjct:   330 IANLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSSREMITVNDSS- 388

Query:   408 SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWL 467
               N+++ I+NRLSALSFHIRE YWVD  KINEIYRYKTEEYS DATNKFNIYPEQ+  WL
Sbjct:   389 -KNIIKTISNRLSALSFHIRENYWVDKNKINEIYRYKTEEYSMDATNKFNIYPEQVSPWL 447

Query:   468 MDWIPE--EGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLV 525
             MDW+PE  + G+LIGNLQPAHMDFRFFTLGNLWSI+SSLGTPKQN++ILNL+E KWDDLV
Sbjct:   448 MDWVPESPDSGFLIGNLQPAHMDFRFFTLGNLWSIISSLGTPKQNQAILNLVEEKWDDLV 507

Query:   526 GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQK 585
             GHMPLKICYPALES +W IITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGR  LA+K
Sbjct:   508 GHMPLKICYPALESSEWHIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPELAEK 567

Query:   586 AVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWE 645
             AV LAE RL  D WPEYYDTR G+F GKQSRL+QTWTIAGFLTSK L++NPE+AS LFWE
Sbjct:   568 AVTLAEKRLQADRWPEYYDTRDGKFIGKQSRLYQTWTIAGFLTSKQLLQNPEIASSLFWE 627

Query:   646 EDYELLEICVCALSKSGRKKCSRGAAKSQILV 677
             ED ELLE CVC L+KSGRKKCSR AAKSQIL+
Sbjct:   628 EDLELLESCVCVLTKSGRKKCSRAAAKSQILI 659
GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=ISS
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.25LOW CONFIDENCE prediction!
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
pfam12899437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 0.0
PLN02703618 PLN02703, PLN02703, beta-fructofuranosidase 0.0
PLN03005550 PLN03005, PLN03005, beta-fructofuranosidase 0.0
PLN02973571 PLN02973, PLN02973, beta-fructofuranosidase 0.0
pfam06202367 pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase 3e-04
COG3408641 COG3408, GDB1, Glycogen debranching enzyme [Carboh 0.001
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information 
 Score =  838 bits (2167), Expect = 0.0
 Identities = 302/443 (68%), Positives = 356/443 (80%), Gaps = 6/443 (1%)

Query: 194 EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRN 253
           EAW LL++++V Y   P+GTVAA DP  +  LNYDQ FIRDFVPSALAFLLKG  EIVRN
Sbjct: 1   EAWELLEKSLVYYQGRPVGTVAALDPSAEDALNYDQCFIRDFVPSALAFLLKGRPEIVRN 60

Query: 254 FLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPV 313
           FLL TLQLQS EKTVDC+ PG+G+MPASFKV +   E    EE L  DFGE AIGRVAPV
Sbjct: 61  FLLETLQLQSQEKTVDCFEPGRGVMPASFKVLHDKDE----EETLIADFGERAIGRVAPV 116

Query: 314 DSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMID 373
           DSGLWWIILLRAY K TGDY+  E  DVQ GI+LI++LCL+D FDMFP+LLV DG+ MID
Sbjct: 117 DSGLWWIILLRAYVKATGDYSFAESPDVQRGIRLILDLCLSDRFDMFPTLLVPDGAFMID 176

Query: 374 RRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433
           RRMG++GHPLEIQALFY ALRC+RE+L   +     +L+  I+NRL AL FHIREYYW+D
Sbjct: 177 RRMGVYGHPLEIQALFYGALRCARELLEPDEDGK--DLIERIDNRLRALRFHIREYYWLD 234

Query: 434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFT 493
           + ++NEIYRYKTEEY  DA NKFNIYPE IP WL DW+PE GGYLIGNL P  MDFRFF+
Sbjct: 235 LDRLNEIYRYKTEEYGDDAVNKFNIYPESIPDWLFDWLPERGGYLIGNLGPGRMDFRFFS 294

Query: 494 LGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNT 553
           LGNL +I+SSL T +Q+++I++LIE +WDDL+G MP+KICYPALE E+WRI+TG DPKNT
Sbjct: 295 LGNLLAILSSLATEEQSQAIMDLIEERWDDLIGEMPMKICYPALEGEEWRIVTGCDPKNT 354

Query: 554 PWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGK 613
           PWSYHNGGSWP LLW  T A +K GR  LA++A+ +AE RLP D WPEYYD +TGR  GK
Sbjct: 355 PWSYHNGGSWPVLLWLLTAAALKTGRPDLAERAIEIAEKRLPKDEWPEYYDGKTGRLVGK 414

Query: 614 QSRLFQTWTIAGFLTSKMLVENP 636
           Q+R +QTWTIAGFL +K L+ENP
Sbjct: 415 QARKYQTWTIAGFLLAKHLLENP 437

This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. Length = 437
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|114894 pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase Back     alignment and domain information
>gnl|CDD|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 677
PLN02703618 beta-fructofuranosidase 100.0
PLN02973571 beta-fructofuranosidase 100.0
PLN03005550 beta-fructofuranosidase 100.0
PF12899436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 100.0
COG3408641 GDB1 Glycogen debranching enzyme [Carbohydrate tra 100.0
TIGR01561575 gde_arch glycogen debranching enzyme, archaeal typ 100.0
TIGR015311464 glyc_debranch glycogen debranching enzymye. glycog 100.0
PRK10137786 alpha-glucosidase; Provisional 100.0
KOG36251521 consensus Alpha amylase [Carbohydrate transport an 99.93
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 99.93
PRK13271569 treA trehalase; Provisional 99.83
PLN02567554 alpha,alpha-trehalase 99.79
COG3387612 SGA1 Glucoamylase and related glycosyl hydrolases 99.77
PRK13272542 treA trehalase; Provisional 99.72
PRK13270549 treF trehalase; Provisional 99.72
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 99.71
PF01204512 Trehalase: Trehalase; InterPro: IPR001661 O-Glycos 99.68
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 99.47
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 99.45
PF03200801 Glyco_hydro_63: Mannosyl oligosaccharide glucosida 99.43
PF00723448 Glyco_hydro_15: Glycosyl hydrolases family 15; Int 99.26
COG34591056 Cellobiose phosphorylase [Carbohydrate transport a 99.26
COG1626558 TreA Neutral trehalase [Carbohydrate transport and 98.62
KOG2161849 consensus Glucosidase I [Carbohydrate transport an 98.57
PF06824424 DUF1237: Protein of unknown function (DUF1237); In 98.45
KOG0602600 consensus Neutral trehalase [Carbohydrate transpor 98.13
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 98.05
COG3538434 Uncharacterized conserved protein [Function unknow 96.71
KOG2119879 consensus Predicted bile acid beta-glucosidase [Ca 95.4
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 90.16
PF03632370 Glyco_hydro_65m: Glycosyl hydrolase family 65 cent 84.22
>PLN02703 beta-fructofuranosidase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-125  Score=1027.62  Aligned_cols=495  Identities=72%  Similarity=1.242  Sum_probs=479.3

Q ss_pred             CcccCCcchHHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHh
Q 005783          181 GVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ  260 (677)
Q Consensus       181 ~~~~~~~~~~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~  260 (677)
                      |...+.+.+.|+++||++|++++|+||++|+||+||.|+....+.||++||+||++|+++++|+.|++|++|+||..+++
T Consensus       122 ~~~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~  201 (618)
T PLN02703        122 GNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQ  201 (618)
T ss_pred             CcccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence            33467888999999999999999999999999999988853356999999999999999999999999999999999999


Q ss_pred             hccccccccccCCCCCCCCCcceeccccCCCcc--cccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhh
Q 005783          261 LQSWEKTVDCYSPGQGLMPASFKVRNVPLESNK--FEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER  338 (677)
Q Consensus       261 lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~--~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~  338 (677)
                      ||++++++|+|++++|+||.+|||.++++|.++  +|++++||+|+.+++|+++|||+|||||++++|.+.|||.+|+++
T Consensus       202 lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~  281 (618)
T PLN02703        202 LQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQER  281 (618)
T ss_pred             hhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhh
Confidence            999999999999999999999999998887765  778999999999999999999999999999999999999999999


Q ss_pred             hcHHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 005783          339 VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR  418 (677)
Q Consensus       339 ~~vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~r  418 (677)
                      +.||++|+.|+++|+.++|+++|+|+++||++|+|+||+++|||+|||||||.|||++.+|+...++  .+++..++..|
T Consensus       282 ~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~--~~e~i~~i~~r  359 (618)
T PLN02703        282 VDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDG--SVDLIRALNNR  359 (618)
T ss_pred             hhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccch--HHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999999998876543  68899999999


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchh
Q 005783          419 LSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLW  498 (677)
Q Consensus       419 a~~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~L  498 (677)
                      +.+|+.+++++||++.+++++|||++||+|++.|+|||||||++||+|+.||++++|||++|||+|+++|+|||++||+|
T Consensus       360 l~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlL  439 (618)
T PLN02703        360 LVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLW  439 (618)
T ss_pred             hhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCHHHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhC
Q 005783          499 SIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMG  578 (677)
Q Consensus       499 Al~~gll~~eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G  578 (677)
                      |+++||++++|+++|+++|+++|++|.+.|||++|||++.+.+||++|+++|+|.||+|||||+||.++|++++|++|.|
T Consensus       440 AILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~G  519 (618)
T PLN02703        440 SIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMG  519 (618)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHhhCCCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhcCCCcCccccccccHHHHhHhhhhc
Q 005783          579 RLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVENPEMASVLFWEEDYELLEICVCAL  658 (677)
Q Consensus       579 ~~~~A~~ll~~a~~~l~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~~~~~  658 (677)
                      +.+.|+++++.+++++..+.|||||||.+|+|+|.+||..||||+|++|+++++|+||+++.+|+|+||.++++.|+|.+
T Consensus       520 r~~lA~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~  599 (618)
T PLN02703        520 RPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMI  599 (618)
T ss_pred             CHHHHHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccCC
Q 005783          659 SKSGRKKCSRGAAKSQILV  677 (677)
Q Consensus       659 ~~~~~~~~~~~~~~~~~~~  677 (677)
                      ++++|+||+|+++|.+++|
T Consensus       600 ~~~~~~~~~~~~~~~~~~~  618 (618)
T PLN02703        600 SANPRRTRGPKKAQQPFIV  618 (618)
T ss_pred             ccCCcccCCCccccCCccC
Confidence            9999999999999999886

>PLN02973 beta-fructofuranosidase Back     alignment and domain information
>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>PRK10137 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PRK13271 treA trehalase; Provisional Back     alignment and domain information
>PLN02567 alpha,alpha-trehalase Back     alignment and domain information
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13272 treA trehalase; Provisional Back     alignment and domain information
>PRK13270 treF trehalase; Provisional Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3538 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 2e-14
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 4e-05
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 7e-04
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 Back     alignment and structure
 Score = 75.9 bits (186), Expect = 2e-14
 Identities = 45/375 (12%), Positives = 100/375 (26%), Gaps = 58/375 (15%)

Query: 233 RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESN 292
           RD    A++       E+ R  ++  L+ Q                P      +V    +
Sbjct: 349 RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEK---EDVAPSKS 404

Query: 293 KFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYA-LQERVDVQTGIKLIMNL 351
                   D  +    +    D  LW I  +  Y   TG+ +   + +    G +  +  
Sbjct: 405 PTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYE 464

Query: 352 CLADGFDMFPSLLVTDGSCMI--------DRRMGIHGHPLEIQALFYTALRCSREMLTVS 403
            +    D   S      + +         D      G    +  L + AL+   E + ++
Sbjct: 465 HMKAALD--FSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQ---EFIDLA 519

Query: 404 DGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQI 463
              G +  V       + +      + W D                              
Sbjct: 520 KFLGKDQDVNTYTEMAANVREACETHLWDDEGG--------------------------- 552

Query: 464 PSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDD 523
             W +  + + G  +         + R     N  +++S L + ++ E  ++ ++     
Sbjct: 553 --WYIRGLTKNGDKIGT---AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDEHLFS 607

Query: 524 LVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLA 583
             G       +     +   +              NG  +         A +   +LG  
Sbjct: 608 PYGLHLNAPSFSTPNDDIGFVTR-----VYQGVKENGAIFS---HPNPWAWVAETKLGRG 659

Query: 584 QKAVALAENRLPLDH 598
            +A+   +   P + 
Sbjct: 660 DRAMKFYDALNPYNQ 674
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Length = 811 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Length = 822 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
2z07_A420 Putative uncharacterized protein TTHA0978; unchara 100.0
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 100.0
2jg0_A535 Periplasmic trehalase; family 37, hydrolase, inhib 100.0
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 99.97
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 99.97
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 99.97
2okx_A956 Rhamnosidase B; alpha barrel, glycoside hydrolase 99.91
3cih_A739 Putative alpha-rhamnosidase; structural genomics, 99.89
1ulv_A 1020 Glucodextranase; GH family 15, (alpha-alpha)6-barr 99.88
1lf6_A684 Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica 99.85
2fba_A492 Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy 99.67
1gai_A472 Glucoamylase-471; hydrolase, glycosidase, polysacc 99.64
2vn4_A 599 Glucoamylase; hydrolase, carbohydrate binding, gly 99.63
2p0v_A489 Hypothetical protein BT3781; alpha-beta protein, s 99.43
3p2c_A463 Putative glycosyl hydrolase; structural genomics, 99.26
3qt9_A427 Putative uncharacterized protein CPE0426; alpha-al 99.24
3qry_B426 Putative uncharacterized protein; alpha-alpha six 99.21
1h54_A754 Maltose phosphorylase; hydrolase, maltose metaboli 96.3
2rdy_A803 BH0842 protein; PSI-II, structural genomics, prote 95.65
2eab_A899 Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi 93.45
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
Probab=100.00  E-value=9e-34  Score=306.54  Aligned_cols=345  Identities=16%  Similarity=0.123  Sum_probs=244.7

Q ss_pred             HHHHHHHHHHHHhHhhhccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHh-hccccccc
Q 005783          190 EIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ-LQSWEKTV  268 (677)
Q Consensus       190 ~~~~~A~~lLr~~~~~~~~~p~G~iAa~~~~~a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~-lQs~e~~~  268 (677)
                      .+.++|+..|+.     |.+..+++|+       ..+|..+|+||+.+++++++.. +++.+++.|..++. .|      
T Consensus         3 ~l~~~a~~~l~~-----n~~~~~~vP~-------~~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q------   63 (420)
T 2z07_A            3 PLRTKAVEVLQR-----NSRGAFTVPA-------HGLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ------   63 (420)
T ss_dssp             CHHHHHHHHHHH-----HBCSSCBCSS-------TTCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHH-----cCCCCCcCCC-------CCCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH------
Confidence            477899999987     4444455555       2489999999999999998865 68888887776664 44      


Q ss_pred             cccCCCCCCCCCcceeccccCCCcccccccCCC-CCC-CCC-CcccCCCcHHHHHHHHHHHHHHhCC----hhHHhh--h
Q 005783          269 DCYSPGQGLMPASFKVRNVPLESNKFEEVLDPD-FGE-SAI-GRVAPVDSGLWWIILLRAYGKITGD----YALQER--V  339 (677)
Q Consensus       269 ~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd-~Ge-~a~-~~ygsVDAtLWfIial~~Y~~~TGD----~~fl~~--~  339 (677)
                          ..+|+||+.+.  +.+.|.   + +..++ .|. .++ .++.+.|.++++++++++|+++|||    .+|+++  |
T Consensus        64 ----~~~G~ip~~v~--~~~~~~---y-~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p  133 (420)
T 2z07_A           64 ----GPDGMLPHIVF--HEQSRD---Y-FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFP  133 (420)
T ss_dssp             ----CTTCCCCSEEE--CCSCCC---C-C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred             ----hhCCCcceecc--cCCCcc---c-CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHH
Confidence                35889997431  101000   0 00011 111 122 2456899999999999999999999    899998  6


Q ss_pred             cHHHHHHHHHHHhh--cCCCcccCcccccCCC----cccccc----cC------C-------------------------
Q 005783          340 DVQTGIKLIMNLCL--ADGFDMFPSLLVTDGS----CMIDRR----MG------I-------------------------  378 (677)
Q Consensus       340 ~vq~al~~Il~~~~--~~gf~~y~~Ll~~dG~----~WmD~r----~g------r-------------------------  378 (677)
                      .+++.++++++..+  ++|...+.-. ..+|.    .|+|..    .+      |                         
T Consensus       134 ~l~~~~~~~~~~~d~~~~Gl~~~~~~-we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~  212 (420)
T 2z07_A          134 KLLAFHRWLYHARDPYRTGLVVIVHP-WESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLY  212 (420)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCCCBSSG-GGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCCceeeecC-CCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHH
Confidence            56666666655442  2343321100 11221    454431    00      1                         


Q ss_pred             ------------------CCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 005783          379 ------------------HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEI  440 (677)
Q Consensus       379 ------------------~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~~Lk~~f~~~FW~d~~~~~~~  440 (677)
                                        .+.+|++||++|.+++.+++|++.+|.  .   ++.+.++++++|+.|++ ||+++++.+. 
T Consensus       213 ~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~--~---a~~~~~~a~~~~~ai~~-~Wd~~~g~~~-  285 (420)
T 2z07_A          213 LFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE--D---PYEIEEWIVRGEVGLEA-LWDREAGFYF-  285 (420)
T ss_dssp             HHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC--C---CHHHHHHHHHHHHHHHH-TEETTTTEEC-
T ss_pred             HHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc--c---HHHHHHHHHHHHHHHHH-hhCcccCeeE-
Confidence                              124789999999999999999999975  2   56677888899999999 9997665430 


Q ss_pred             hhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCccCcccccccchhhhhcCCCCHHHHHHHHHHHHHh
Q 005783          441 YRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAK  520 (677)
Q Consensus       441 yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~~D~r~dslGN~LAl~~gll~~eqa~~Vv~~i~~~  520 (677)
                               +                   +....|         ...+  .....+++++++|+++++++++|++.+.  
T Consensus       286 ---------d-------------------~~~~~g---------~~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l~--  324 (420)
T 2z07_A          286 ---------S-------------------WDLVAG---------EPIA--VKTSAGFLPLFAGTPHQGRASLLAQEAE--  324 (420)
T ss_dssp             ---------C-------------------EETTTT---------EECC--CCBGGGGTHHHHTCSCHHHHHHHHHHHH--
T ss_pred             ---------e-------------------eeCCCC---------Ceec--cccHHhHHHHHcCCCCHHHHHHHHHHHH--
Confidence                     0                   000000         0000  2245677899999999999999999986  


Q ss_pred             hhhhc--cCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhCCCCC
Q 005783          521 WDDLV--GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDH  598 (677)
Q Consensus       521 w~~Ll--tp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~r~G~~~~A~~ll~~a~~~l~~~~  598 (677)
                        +++  +++|+++++|            +++.|+|.+||||++||+++++++.||.++|+.++|.+++......+..++
T Consensus       325 --~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~  390 (420)
T 2z07_A          325 --RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREG  390 (420)
T ss_dssp             --HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred             --HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCC
Confidence              566  8999999877            456788999999999999999999999999999999998876444444578


Q ss_pred             CCccccCCCCCccCCCCCccchHhHHHHHHH
Q 005783          599 WPEYYDTRTGRFTGKQSRLFQTWTIAGFLTS  629 (677)
Q Consensus       599 ~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a  629 (677)
                      +.|.||+.+|.|.|+.   +|+||+|.+|.+
T Consensus       391 ~~E~yd~~~g~~~g~~---~fgWs~~~~l~l  418 (420)
T 2z07_A          391 FREYYDPLTGQGRGGE---GFSWSAALALFW  418 (420)
T ss_dssp             SEEEECTTTCCEEEEE---SCHHHHHHHHHH
T ss_pred             eeeeeCCCCCCcCCCC---CCchHHHHHHHH
Confidence            8999999999998887   999999998865
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Back     alignment and structure
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Back     alignment and structure
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* Back     alignment and structure
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* Back     alignment and structure
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A Back     alignment and structure
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* Back     alignment and structure
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* Back     alignment and structure
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 Back     alignment and structure
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* Back     alignment and structure
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A Back     alignment and structure
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* Back     alignment and structure
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 Back     alignment and structure
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Back     alignment and structure
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 677
d1v7wa1531 a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb 3e-16
d1lf6a1397 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-te 3e-04
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 79.6 bits (195), Expect = 3e-16
 Identities = 49/395 (12%), Positives = 104/395 (26%), Gaps = 54/395 (13%)

Query: 211 IGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDC 270
              V +      +      +  RD    A++       E+ R  ++  L+ Q        
Sbjct: 57  TCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLH 115

Query: 271 YSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKIT 330
                   P      +V    +        D  +    +    D  LW I  +  Y   T
Sbjct: 116 LFDPDWFDPEK---EDVAPSKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMET 172

Query: 331 GDYA-LQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMI------DRRMGIHGHPL 383
           G+ +   + +    G +  +   +    D     +   G C        D      G   
Sbjct: 173 GETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGESS 232

Query: 384 EIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY 443
            +  L + AL+                               I    ++   +    Y  
Sbjct: 233 MVSFLHFWALQ-----------------------------EFIDLAKFLGKDQDVNTYTE 263

Query: 444 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSS 503
                                 W +  + + G  +         + R     N  +++S 
Sbjct: 264 MAANVREACETHLWDDEGG---WYIRGLTKNGDKI---GTAQQQEGRVHLESNTLAVLSG 317

Query: 504 LGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSW 563
           L + ++ E  +   +A  + L     L +  P+  + +  I   +  +       NG  +
Sbjct: 318 LASQERGEQAM---DAVDEHLFSPYGLHLNAPSFSTPNDDIGFVT--RVYQGVKENGAIF 372

Query: 564 PTLLWQFTLACIKMGRLGLAQKAVALAENRLPLDH 598
                   +A  K+GR     +A+   +   P + 
Sbjct: 373 SHPNPWAWVAETKLGR---GDRAMKFYDALNPYNQ 404
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Length = 397 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
d1lf6a1397 Bacterial glucoamylase, C-terminal domain {Thermoa 99.96
d1v7wa1531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 99.93
d1ulva1413 Glucodextranase, domain A {Arthrobacter globiformi 99.91
d2jg0a1511 Periplasmic trehalase TreA {Escherichia coli [TaxI 99.9
d2fbaa1492 Glucoamylase {Yeast (Saccharomycopsis fibuligera) 99.54
d1gaia_472 Glucoamylase {Aspergillus awamori, variant x100 [T 99.44
d2nvpa1426 Hypothetical protein CPF0428 {Clostridium perfring 98.5
d2p0va1443 Hypothetical protein BT3781 {Bacteroides thetaiota 98.4
d1h54a1485 Lactobacillus maltose phosphorylase, central domai 93.8
d2sqca1352 Squalene-hopene cyclase {Alicyclobacillus acidocal 92.19
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]

Probab=99.96  E-value=1.2e-28  Score=260.98  Aligned_cols=361  Identities=14%  Similarity=0.070  Sum_probs=243.6

Q ss_pred             chHHHHHHHHHHHHhHhhhccc-cceeeeccCCCC------CCCCCCCcccchhhHHHHHHHhccCChHHHHHHHHHHHh
Q 005783          188 ETEIEKEAWRLLQEAVVTYCES-PIGTVAANDPGD------KQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ  260 (677)
Q Consensus       188 ~~~~~~~A~~lLr~~~~~~~~~-p~G~iAa~~~~~------a~~~~Y~~vwGRDt~Is~lglL~~G~pEiar~~L~~l~~  260 (677)
                      ...|.++++-.||.+ +  +.+ ++++||++.++-      ...+.|..+|+||++|++.+++..|++++++.+|.++++
T Consensus         7 ~~~~~~~s~~~lk~~-~--~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~   83 (397)
T d1lf6a1           7 ANSLYYNSMMILKAS-E--DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK   83 (397)
T ss_dssp             CCHHHHHHHHHHHTT-B--CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-c--CCCCCceEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            456777777777742 1  222 688889875421      124579999999999999999989999999999999998


Q ss_pred             hccccccccccCCCCCCCCCcceeccccCCCcccccccCCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCChhHHhhhc
Q 005783          261 LQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD  340 (677)
Q Consensus       261 lQs~e~~~~~~~~~~G~iP~sfki~h~e~~~~~~e~~l~pd~Ge~a~~~ygsVDAtLWfIial~~Y~~~TGD~~fl~~~~  340 (677)
                      .|..+          |.+|+.+-+                 .|... ......|++.|+++++++|.+.+....+     
T Consensus        84 ~~~~~----------G~~~~~~~~-----------------~G~~~-~~~~q~D~~g~~i~a~~~~~~~~~~~~~-----  130 (397)
T d1lf6a1          84 VVKDN----------GMIPQNTWI-----------------SGKPY-WTGIQLDEQADPIILSYRLKRYDLYDSL-----  130 (397)
T ss_dssp             HHHHH----------SSCCSCBCT-----------------TSCBC-CCCCCHHHHHHHHHHHHHTTCGGGTTTT-----
T ss_pred             Hhccc----------CCCCCCCCc-----------------CCCcc-ccCCCCchHHHHHHHHHHHHhcchhHHH-----
Confidence            88754          455664410                 12211 1123679999999999999877655443     


Q ss_pred             HHHHHHHHHHHhhcCCCcccCcccccCCCcccccccCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 005783          341 VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLS  420 (677)
Q Consensus       341 vq~al~~Il~~~~~~gf~~y~~Ll~~dG~~WmD~r~gr~G~pVEIQALwY~ALr~aaeLa~~lg~~~~~~~a~~~~~ra~  420 (677)
                      +++++++++.....+.++.           |.    .+.|+-.++++++|.||++++.++..++   +.+.+..+.+.+.
T Consensus       131 i~~~~~~l~~~~~~~~~~l-----------WE----e~~g~~~~t~~~~~~aL~~~a~la~~~g---~~~~a~~~~~~A~  192 (397)
T d1lf6a1         131 VKPLADFIIKIGPKTGQER-----------WE----EIGGYSPATMAAEVAGLTCAAYIAEQNK---DYESAQKYQEKAD  192 (397)
T ss_dssp             HHHHHHHHHHHCSSBSSCT-----------TS----SCCBBCHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcccc-----------cc----ccCCcccchhHHHHHHHHHHHHHHHhcC---ChhHHHHHHHHHH
Confidence            4567777776655444444           32    3456779999999999999999999987   4778888999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhccccccchhhhcccCCCCCCccccccccccCCCCeeeccccCCc---cCcccccccch
Q 005783          421 ALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAH---MDFRFFTLGNL  497 (677)
Q Consensus       421 ~Lk~~f~~~FW~d~~~~~~~yr~~te~y~~~a~n~fn~~p~~ip~~l~d~i~~~ggYl~g~v~p~~---~D~r~dslGN~  497 (677)
                      .++..|.++||.++...+.      ..|........              .. ..+......++..   .+..+|+ +.+
T Consensus       193 ~i~~~i~~~~~~~~~~~~~------~~~~~r~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~lDa-sll  250 (397)
T d1lf6a1         193 NWQKLIDNLTYTENGPLGN------GQYYIRIAGLS--------------DP-DADFMINIANGGGVYDQKEIVDP-SFL  250 (397)
T ss_dssp             HHHHHHHHHHEESSCSSTT------SCEECSCBSSS--------------CT-TSCCEEEETTTTEEEEGGGCCCG-GGG
T ss_pred             HHHHHHHHhccCccccccc------ccceecccccc--------------Cc-cccccccccccccccccCCCcCH-HHh
Confidence            9999999999987654321      11100000000              00 0011111111100   1111332 233


Q ss_pred             hhhhcCCCCH--HHHHHHHHHHHHhhhhhccCCCceeecCCCCCCCCeeecCCCCCCCCCccccCCCchhhHHHHHHHHH
Q 005783          498 WSIVSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACI  575 (677)
Q Consensus       498 LAl~~gll~~--eqa~~Vv~~i~~~w~~Lltp~pLr~L~P~l~~~~wr~~t~g~~~~rP~sYHNGgVWP~l~wl~a~al~  575 (677)
                      +++++|++++  ++....++.+++   +|..+.|+....+.+   ....++.....+.+..+|+|..||.....++++++
T Consensus       251 ~~~~~g~~~~~d~~~~~tl~~i~~---~l~~~~g~~~~~~RY---~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a~~~~  324 (397)
T d1lf6a1         251 ELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRY---NHDGYGEPSKTELYHGAGKGRLWPLLTGERGMYEI  324 (397)
T ss_dssp             HHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSS---TTCCCSCSBTTBCCSSSSCCCBBHHHHHHHHHHHH
T ss_pred             hccccCCCCCCCHHHHHHHHHHHH---HhccCCCcccccccc---ccccccccCCcCCccCCcCCchHHHHHHHHHHHHH
Confidence            4567787654  677777777776   888888887665533   22233333445566778888888887777888988


Q ss_pred             HhCChHHHHHHHHHHHhhC-CCCCCCccccCCCCCccCCCCCccchHhHHHHHHHHHHhc
Q 005783          576 KMGRLGLAQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVE  634 (677)
Q Consensus       576 r~G~~~~A~~ll~~a~~~l-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~  634 (677)
                      +.|+  +|+++++.+..+. ..+.|||.||+.+|.|.|.  +.|||||+|++|++.+.|+
T Consensus       325 ~~g~--~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~--a~plaWS~A~~i~~~~~l~  380 (397)
T d1lf6a1         325 AAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI  380 (397)
T ss_dssp             HTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred             HccH--HHHHHHHHHHHhcCCCCccceeecCCCCCcCCC--CccHHHHHHHHHHHHHHHh
Confidence            8885  5778887765554 5678999999999999873  2399999999999888765
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} Back     information, alignment and structure
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} Back     information, alignment and structure
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]} Back     information, alignment and structure