Citrus Sinensis ID: 005855
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 673 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.967 | 0.691 | 0.824 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.826 | 0.676 | 0.654 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.833 | 0.705 | 0.64 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.794 | 0.683 | 0.612 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.789 | 0.724 | 0.457 | 1e-145 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.734 | 0.962 | 0.483 | 1e-135 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.692 | 0.901 | 0.5 | 1e-134 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.682 | 0.927 | 0.497 | 1e-134 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.677 | 0.972 | 0.505 | 1e-133 | |
| Q92410 | 478 | Alpha,alpha-trehalose-pho | N/A | no | 0.693 | 0.976 | 0.498 | 1e-133 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/657 (82%), Positives = 591/657 (89%), Gaps = 6/657 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPGN YN +SS+IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTPNEG--CERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDK
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDK 653
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Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
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Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/564 (65%), Positives = 467/564 (82%), Gaps = 8/564 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG 151
R RLLVVANRLPVSA R GE+SWSLE+S GGLVS LLG+ +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+ ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 272 HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGID +RFIR ++ V + ELQE FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGRFG+++++PIHHLD S+DF
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
W++TEV++AI ALNM EERE RH NF +V TH+A++W F+SELN + E++++++
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 572 QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL 631
++P L E D I++Y +SNNRL+ILGF TL EP+++ +EM+LKL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS------GTKEMDLKLNPELKGTL 543
Query: 632 NALCHDPKTTIVVLSGSDRNVLDK 655
ALC+DPKTT+VVLS S +N+L+K
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNK 567
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/575 (64%), Positives = 447/575 (77%), Gaps = 14/575 (2%)
Query: 91 FSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEI 150
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D I
Sbjct: 1 MARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAI 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
G+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ
Sbjct: 61 GKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQ 119
Query: 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE 270
+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE
Sbjct: 120 YEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSE 179
Query: 271 IHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA
Sbjct: 180 MYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAV 239
Query: 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390
FPIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLE
Sbjct: 240 FPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLE 299
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
EN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 300 ENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDF 359
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVN
Sbjct: 360 NQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVN 419
Query: 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELND 561
PWNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 420 PWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIE 479
Query: 562 TVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREME 620
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M
Sbjct: 480 ITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MN 536
Query: 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
L+LHP LK+ L LC DPKTT+VVLS S++ +LDK
Sbjct: 537 LELHPQLKERLKELCSDPKTTVVVLSRSEKCILDK 571
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
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Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/563 (61%), Positives = 440/563 (78%), Gaps = 28/563 (4%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
RQ LLVVANRLP SA R GE SWSLE+S GG + L + +
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLL---------------------VEK 48
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
A++K+LAE +CIPVFL+E + QYYNGY N ILWP+ H++GLPQE T ++F++Q+
Sbjct: 49 DAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYD 107
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DV+ ++YKDGD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSEI+
Sbjct: 108 AYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIY 167
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLR+VLAADL+ FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV P
Sbjct: 168 KTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLP 227
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GI RFI+ ++ V + EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN
Sbjct: 228 MGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDEN 287
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR K+VL+QIAVPTR +VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D
Sbjct: 288 PNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNY 347
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA++DV LVTSLRDG+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LVNPW
Sbjct: 348 LCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPW 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
N+TEV++AI +ALNM EERE RH NF +V TH+A++W F+SELND E++L+I++
Sbjct: 408 NVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRK 467
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L + D I+RY SNNRL+ILGF T+TEP R +EM+LKL+P+LK+ L
Sbjct: 468 IPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLK 521
Query: 633 ALCHDPKTTIVVLSGSDRNVLDK 655
ALC+DPKTT+VVLS S +N+LDK
Sbjct: 522 ALCNDPKTTVVVLSRSGKNILDK 544
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/571 (45%), Positives = 368/571 (64%), Gaps = 40/571 (7%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKA 154
RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWVGWIGAEIEEDDRKEI 75
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQEDRLATTRSFQSQFA 212
+ CIPVFL E + +++YNG+ N +LWPLFHYL L +DR+ +
Sbjct: 76 KELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WN 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
+Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D ++G+FLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
R LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E P GV + R +V FP
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFP 246
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKGIPQKL A E+ ++
Sbjct: 247 VGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKY 306
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++ PIH+L +S+D
Sbjct: 307 PEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSE 366
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPW
Sbjct: 367 LTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPW 425
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN------DTVVEA 566
N EVA++I +L M PEERE++H +VT HTA W FV ELN D +V
Sbjct: 426 NTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTI 485
Query: 567 Q-LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG-RRGDQIREMELKLH 624
Q L I++V ++ Y +S RLLI ++ TL + P R Q
Sbjct: 486 QKLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQ--------- 527
Query: 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
+L + L +DPKT + +LSG D+ L +
Sbjct: 528 -ELLNSFDILSNDPKTDVYILSGRDKKTLSE 557
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Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/507 (48%), Positives = 335/507 (66%), Gaps = 13/507 (2%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--- 252
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 253 -NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
D+K+G+FLHTPFPSSEI+R LP R+++L VL DLVGFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSELNDTVVEAQLRIKQVPPSLR 578
++FV EL + ++ P LR
Sbjct: 474 GQSFVGELQRIQHYSHPHPRRTNPILR 500
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 329/480 (68%), Gaps = 14/480 (2%)
Query: 86 LDGRTFSRQ-RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAG 143
L+ TF + RLL+V+NRLP++ R + + +S+GGLVS L G+ K +W GW G
Sbjct: 4 LENPTFQNEARLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPG 63
Query: 144 VNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P E
Sbjct: 64 LEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD- 120
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVG 259
+S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D +K+G
Sbjct: 121 ----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIG 176
Query: 260 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGV 319
+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG TP G+
Sbjct: 177 FFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGI 236
Query: 320 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379
E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+P
Sbjct: 237 EFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVP 296
Query: 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439
QKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +
Sbjct: 297 QKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFM 356
Query: 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499
PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAA
Sbjct: 357 PIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAA 416
Query: 500 QSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
QSL G+I++NPWN E+A A A+ MS E+R +V +T+ W ++FV+EL
Sbjct: 417 QSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 329/476 (69%), Gaps = 17/476 (3%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDE 149
S ++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+
Sbjct: 14 SGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD 73
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ L + +P+FL ++I +YNG+ N+ILWPLFHY P E ++
Sbjct: 74 EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----EN 126
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHT 264
+ AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHT
Sbjct: 127 AWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHT 186
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
PFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 187 PFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGR 246
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A
Sbjct: 247 FVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHA 306
Query: 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444
E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH +
Sbjct: 307 MEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFM 366
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA 504
+S+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL
Sbjct: 367 HKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN- 425
Query: 505 GAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559
GAI+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL
Sbjct: 426 GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/471 (50%), Positives = 322/471 (68%), Gaps = 15/471 (3%)
Query: 96 LLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA-RWIGWAGVNVPDEIGQKA 154
+LV++NRLPV+ R + ++ +S+GGLV+AL G+K+ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY 214
+ C+PVF+D+D+ +YNG+ N+ILWPLFHY P E Q + AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD------MKVGWFLHTPFPS 268
+AN++FA V K GD+VW HDYHLM LP+ L+E + +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL E P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID +F+ + VQ I +LQ+ F G KV++GVDRLD IKG+PQKL AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRING FGT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q W E FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q92410|TPS1_CANAL Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/481 (49%), Positives = 330/481 (68%), Gaps = 14/481 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE----YNSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP R ++L VL+ DL+GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 673 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.967 | 0.691 | 0.797 | 9.3e-281 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.832 | 0.704 | 0.618 | 7.9e-188 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.821 | 0.754 | 0.443 | 5.2e-129 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.679 | 0.863 | 0.5 | 2e-118 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.705 | 0.925 | 0.481 | 2.6e-118 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.704 | 0.940 | 0.484 | 1.1e-117 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.679 | 0.923 | 0.489 | 1.1e-117 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.693 | 0.976 | 0.486 | 2.1e-116 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.693 | 0.976 | 0.486 | 2.1e-116 | |
| ASPGD|ASPL0000073095 | 474 | AN8639 [Emericella nidulans (t | 0.659 | 0.936 | 0.389 | 1.6e-88 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2698 (954.8 bits), Expect = 9.3e-281, P = 9.3e-281
Identities = 524/657 (79%), Positives = 571/657 (86%)
Query: 1 MPGXXXXXXXXXIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPG IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTP--NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ ++ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDK
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDK 653
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1821 (646.1 bits), Expect = 7.9e-188, P = 7.9e-188
Identities = 355/574 (61%), Positives = 433/574 (75%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIG 151
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D IG
Sbjct: 2 ARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIG 61
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ+
Sbjct: 62 KKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQY 120
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE+
Sbjct: 121 EAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEM 180
Query: 272 HRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLP GFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA F
Sbjct: 181 YKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVF 240
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLEE
Sbjct: 241 PIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEE 300
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 301 NAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFN 360
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVNP
Sbjct: 361 QLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNP 420
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELNDT 562
WNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 421 WNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEI 480
Query: 563 VVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL 621
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M L
Sbjct: 481 TTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNL 537
Query: 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
+LHP LK+ L LC DPKTT+VVLS S++ +LDK
Sbjct: 538 ELHPQLKERLKELCSDPKTTVVVLSRSEKCILDK 571
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
Identities = 257/579 (44%), Positives = 362/579 (62%)
Query: 80 NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWI 139
NE L+ T RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWV 60
Query: 140 GWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLP 196
GW G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 61 GWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLD 119
Query: 197 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 256
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D
Sbjct: 120 YDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA 170
Query: 257 KVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTP 316
++G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E P
Sbjct: 171 RIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAP 230
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IK
Sbjct: 231 NGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIK 290
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
GIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++
Sbjct: 291 GIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSI 350
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 351 GYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFT 410
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W FV
Sbjct: 411 GAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 557 SELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI 616
ELN + + + ++ Y +S RLLI ++ TL + P Q+
Sbjct: 470 KELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP-----QL 522
Query: 617 REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
+L + L +DPKT + +LSG D+ L +
Sbjct: 523 SRPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSE 557
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 236/472 (50%), Positives = 318/472 (67%)
Query: 95 RLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQ 152
RLL+++NRLP++ I+R +D +S +S+GGLV+ L G+ K +W GW G+ VPD
Sbjct: 15 RLLLISNRLPIT-IKRSDDGQYSFSMSSGGLVTGLSGLAKTTSFQWYGWPGLEVPDAEAG 73
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ + E PVF+D+++ ++YNG+ N+ILWPLFHY P E +S ++
Sbjct: 74 PVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--PGEITFD-----ESAWS 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVGWFLHTPFPS 268
AY + N++FA V K +DGD++W HDYHLM LP+ L+E D +K+G+FLHTPFPS
Sbjct: 127 AYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPS 186
Query: 269 SEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP GFHTYDYARHF+S+C+RIL TP GV+ GR V
Sbjct: 187 SEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNGVQFAGRFVTV 246
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID E+F+ L+ VQ I L F G K+++GVDRLD IKG+PQKL A E F
Sbjct: 247 GAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVF 306
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L +S+
Sbjct: 307 LTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSV 366
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+ILSEF GAAQSL +G+++
Sbjct: 367 SFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSL-SGSLI 425
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
VNPWN E+ANAI A+ M PE+RE +V +T+ W +FV+ELN
Sbjct: 426 VNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELN 477
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 235/488 (48%), Positives = 319/488 (65%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD 255
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E D
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 256 ----MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILG 311
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSEL 559
++FV EL
Sbjct: 474 GQSFVGEL 481
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 238/491 (48%), Positives = 326/491 (66%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE 149
+ RLL+V+NRLP++ I+R ED + +S+GGLVS L G+ K +W GW G+ VP+E
Sbjct: 10 NESRLLLVSNRLPIT-IKRSEDGKYDFSMSSGGLVSGLSGLSKTTTFQWYGWPGLEVPEE 68
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ E IPVF+D+++ ++YNG+ N+ILWPLFHY P E +S
Sbjct: 69 EIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ES 121
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS--DMKVGWFLHTP 265
+ AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+ ++K+G+FLHTP
Sbjct: 122 AWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTP 181
Query: 266 FPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL 325
FPSSEI+R LP GFHTYDY RHF+SAC+R+LG TP G+E QG++
Sbjct: 182 FPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNGIEFQGKI 241
Query: 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385
AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+PQKL A
Sbjct: 242 IACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHAL 301
Query: 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445
E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L
Sbjct: 302 EVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLH 361
Query: 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG 505
+S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+LSEFAGAAQSL G
Sbjct: 362 KSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLN-G 420
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
+I+VNPWN E+A A A+ MS E+R +V +T+ W ++FV+EL +
Sbjct: 421 SIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTELTRISEQ 480
Query: 566 A--QLRIKQVP 574
A +L K+ P
Sbjct: 481 AAGKLPTKETP 491
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 233/476 (48%), Positives = 321/476 (67%)
Query: 96 LLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+ +
Sbjct: 18 IIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD-EKD 76
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ K L EK +P+FL ++I +YNG+ N+ILWPLFHY P E ++ +
Sbjct: 77 QVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----ENAWL 129
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHTPFP 267
AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHTPFP
Sbjct: 130 AYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFP 189
Query: 268 SSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTR 327
SSEI+R LP GFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGRFVN 249
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A E
Sbjct: 250 VGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEV 309
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH + +S
Sbjct: 310 FLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKS 369
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL GAI
Sbjct: 370 IPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN-GAI 428
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSELNDT 562
+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL T
Sbjct: 429 IVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHELYST 483
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| ASPGD|ASPL0000073095 AN8639 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 180/462 (38%), Positives = 273/462 (59%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG 151
+++LL+++NRLP+S +++ + + +S+GGLV+AL GV K RW GW G N+ D
Sbjct: 5 KRQLLIISNRLPLS-LQKVDGKYESTLSSGGLVTALSGVSKSTNVRWFGWPGSNIEDPEE 63
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL-GLP-QEDRLATTRSFQS 209
+K +ALAE + +FLDE + H +YN + N I WP+ HY G+ ED
Sbjct: 64 RKTANEALAENNAVGIFLDEALAHSHYNVFSNGIAWPILHYQSGVDFNEDA--------- 114
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE----YNSDMKVGWFLHTP 265
+ +Y K N++FAD V + DGD++W HDYHL+ LP L++ +G+ LHTP
Sbjct: 115 -WKSYKKVNEIFADSVAESASDGDLIWIHDYHLLLLPAYLRDRLEKQGKKCPIGFTLHTP 173
Query: 266 FPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL 325
FP+ + R LP GFHT +Y R+F+ C+R L + + QG
Sbjct: 174 FPAEDFWRALPVQKELLAGVLACDLIGFHTDEYKRNFIECCSRGLDVSVKDDSIVYQGHT 233
Query: 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385
R F +G+D +F L+ V+ IKEL++ + + V+LGVDRLD KG+ QKL +
Sbjct: 234 ARTGTFVVGVDPAKFTDGLQTTEVKNRIKELEDEYKHKTVILGVDRLDYTKGLVQKLQGY 293
Query: 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445
+ FL ++ + + KV L+Q+A+P+R DV EYQ L ++ +VG+ING T PI +L
Sbjct: 294 DYFLRQHPELKNKVRLIQVAIPSREDVKEYQELERELSMLVGKINGEHSTPDGTPIIYLH 353
Query: 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG 505
S+ F L ALY + D+ L+TS RDGMNLV+ E+VACQ + GVL+LSE AGAA + G
Sbjct: 354 HSVPFTDLTALYRIADICLITSRRDGMNLVAAEYVACQKDRFGVLVLSELAGAASFMSKG 413
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547
+I NP + ++A+A+ +A MSPEE+++ + +T +T
Sbjct: 414 SITFNPSSAQQLADAVYKAATMSPEEKKQGYLQLEEFITNNT 455
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q07158 | TPS1_KLULA | 2, ., 4, ., 1, ., 1, 5 | 0.5158 | 0.6745 | 0.9303 | yes | no |
| O74932 | TPS1_YARLI | 2, ., 4, ., 1, ., 1, 5 | 0.5053 | 0.6775 | 0.9722 | yes | no |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8249 | 0.9673 | 0.6910 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.963 |
| 4th Layer | 2.4.1.15 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_1680018 | hypothetical protein (922 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_fgenesh4_pg.C_LG_III0902 | hypothetical protein (662 aa) | • | 0.702 | |||||||
 | PtpRR9 | pseudo response regulator (541 aa) | • | 0.683 | |||||||
 | fgenesh4_pg.C_scaffold_122000043 | hypothetical protein (472 aa) | • | 0.683 | |||||||
 | estExt_fgenesh4_pm.C_LG_VI0700 | hypothetical protein (664 aa) | • | 0.683 | |||||||
 | estExt_fgenesh4_pg.C_LG_X0958 | hypothetical protein (587 aa) | • | 0.683 | |||||||
 | gw1.XII.661.1 | hypothetical protein (269 aa) | • | • | • | 0.581 | |||||
 | gw1.XV.542.1 | hypothetical protein (267 aa) | • | • | • | 0.580 | |||||
 | gw1.II.1542.1 | hypothetical protein (305 aa) | • | • | 0.514 | ||||||
 | estExt_fgenesh4_pg.C_LG_V1131 | hypothetical protein (1171 aa) | • | 0.510 | |||||||
 | estExt_Genewise1_v1.C_LG_XIV1950 | hypothetical protein (750 aa) | • | 0.510 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 673 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 0.0 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-118 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-87 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 6e-84 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 4e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-05 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-04 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 7e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.002 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1340 bits (3469), Expect = 0.0
Identities = 562/658 (85%), Positives = 599/658 (91%), Gaps = 6/658 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRD 59
MPGN YN SS P RV RL+RE R+LRKS R+S+ ND D N G E FE++ RL +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSE 57
Query: 60 GDNLGPSIVDEDLEGPA--STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSL 117
GDN S V++ LEG A S +GCER +GR RQRLLVVANRLPVSA+RRGEDSWSL
Sbjct: 58 GDNDSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSL 117
Query: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQY 177
EISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQY
Sbjct: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQY 177
Query: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237
YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWC
Sbjct: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237
Query: 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYD 297
HDYHLMFLPKCLKEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYD
Sbjct: 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYD 297
Query: 298 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 357
YARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+
Sbjct: 298 YARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357
Query: 358 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417
E FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+
Sbjct: 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417
Query: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477
LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSY
Sbjct: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477
Query: 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537
EFVACQD KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH
Sbjct: 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 538 HNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILG 597
HNF HVTTHTAQEWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILG
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILG 597
Query: 598 FNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655
FNATLTEPVDTPGRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+
Sbjct: 598 FNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDE 655
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Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1021 bits (2642), Expect = 0.0
Identities = 414/564 (73%), Positives = 483/564 (85%), Gaps = 7/564 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
R RLLVVANRLPVSA R GEDSWSLE+S GGLVSALLGVKEFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+FHY+GLPQEDR TR+F+SQ+
Sbjct: 70 AALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ LKEYN+ MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRILG EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID ERFI E+ V+ H+KEL+ FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRINGRFG++++VPIHHLD S+DF
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
NITEV++AI ALNMS EERE RH HNF +V TH+AQ+WA+ F+SELND +VEA+LR +
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L E D I++Y +SNNRLLILGF TLTEP R QI+EM+L LHP+LK+ L
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKV 656
ALC DPKTT+VVLS S +++LDK
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKN 566
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Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 719 bits (1858), Expect = 0.0
Identities = 257/469 (54%), Positives = 315/469 (67%), Gaps = 15/469 (3%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPV R G LE SAGGL ALLG + W GW+G V ++ G+
Sbjct: 1 RLIVVSNRLPVPITRGG-----LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEP 55
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
L L K PVFL E+ V YYNG+ N+ LWPLFHY P R +
Sbjct: 56 FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWE 108
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY + N++FA+ + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+
Sbjct: 109 AYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIY 168
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
RTLP R +LL +LA DLVGF TYD AR+F+SA +R LG E P GVE GR RV AFP
Sbjct: 169 RTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFP 228
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID +RF + VQ I EL+E+ GRK+++GVDRLD KG+P++LLAFE+FLEE+
Sbjct: 229 IGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH 288
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+R DVPEYQ+L QV E+VGRINGRFGTL PI +L+RS D
Sbjct: 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREE 348
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DV LVT LRDGMNLV+ E+VA QD K GVLILSEFAGAAQ L GA+LVNP+
Sbjct: 349 LMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPY 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
+I +A+AIARAL M EERE+RH + + Q W E F+S+LN
Sbjct: 408 DIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 714 bits (1846), Expect = 0.0
Identities = 280/474 (59%), Positives = 350/474 (73%), Gaps = 10/474 (2%)
Query: 94 QRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV+A R G+ +S+++S+GGLVSAL G+ E E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 151 GQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ +++ L EK C+PVFLD++ V +YYNG+ N+ILWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N++FAD + + YKDGD++W HDYHLM LP+ L++ D K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG-VEDQGRLTRV 328
EI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+LG E T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEK 387
AFPIGID R L+ VQ +KEL+E F +K++LGVDRLD IKGIPQKLLAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VGRING FGTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
LDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
LVNPW+I EVA AI AL MS EER+KRH F +++ H Q WAE+F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 658 bits (1700), Expect = 0.0
Identities = 246/468 (52%), Positives = 314/468 (67%), Gaps = 10/468 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPVS R G+ + SAGGL +AL G+ K W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
T+ L E PVFL + YYNG+ N +LWPLFHY RL R + + A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N+ FAD + + + GD+VW HDYHL+ LP+ L+E D ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP R +LLR +L ADL+GF T YAR+F+S C+R+LG E T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID + F + VQ EL+E GRK+++GVDRLD KGIP++LLAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRING+FGTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DVALVT LRDGMNLV+ E+VACQD GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
+I EVA+AI RAL M EER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 604 bits (1561), Expect = 0.0
Identities = 242/570 (42%), Positives = 339/570 (59%), Gaps = 29/570 (5%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV---PDEI 150
RL++V+NRLPV+ + R + L S GGL + L + W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVT-VVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLG--LPQEDRLATTRSFQ 208
+ + L E +PVFL + V +YY G+CN+ LWPLFHY EDR
Sbjct: 61 RAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF------- 112
Query: 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS 268
+ +Y + NQ FA+ + + GDVVW HDY LM LP L+E D ++G+FLH PFPS
Sbjct: 113 --WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+LG+E + GR+ RV
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRV 230
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFP+GID ++F + + VQ I+ L++ GRK++L +DRLD KGIP++LLAFE+F
Sbjct: 231 DAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
LE+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRING FGT+ PIH+ RSL
Sbjct: 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSL 350
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+L
Sbjct: 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALL 409
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNP +I +A AI RAL M EE+ +R + + +WA F+ EL + + +
Sbjct: 410 VNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKA 469
Query: 569 RIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDL 627
+ + I RY ++ RLL+L ++ TL P EL +L
Sbjct: 470 FASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP----------ELAVPDKEL 519
Query: 628 KQPLNALCHDPKTTIVVLSGSDRNVLDKVL 657
+ L L DP T + ++SG DR+ L++
Sbjct: 520 RDLLRRLAADPNTDVAIISGRDRDTLERWF 549
|
Length = 726 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 546 bits (1408), Expect = 0.0
Identities = 233/473 (49%), Positives = 302/473 (63%), Gaps = 15/473 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEI-SAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV G+ SAGGLV+AL + WIGW+G P +
Sbjct: 14 DSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDE 73
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
L + + E PV L ++ YYNG+ N ILWPLFHY + +R +
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------N 125
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+E D K+G+FLH PFPSS
Sbjct: 126 WWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED--QGRLTR 327
E+ R LP R ++L +L ADL+GF T YAR+F+ C+R+LG G + + GR+ +
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVK 245
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V AFPIGID E F RAL+ VQ + EL E +K+++GVDRLD KGIPQ+LLAFE
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VGRING FG+L+ P+H+L R
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGA 506
LD L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDA 424
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
++VNPW+ EVA+AI RAL MS EER++RH V TH WA +F+ +L
Sbjct: 425 LIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 373 bits (960), Expect = e-118
Identities = 219/619 (35%), Positives = 333/619 (53%), Gaps = 68/619 (10%)
Query: 83 CERLDGRTFSRQRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSAL---LGVKEFEAR 137
C + + R+++VAN+LP+ A R+ G W L+ L LG E E
Sbjct: 49 CSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVI 108
Query: 138 WIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LWPLFHY+ L
Sbjct: 109 YVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-L 165
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLMFLPKCLKE 251
P L R +S + AY+ N++FAD V+N + D VW HDYHLM LP L++
Sbjct: 166 PLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRK 221
Query: 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
+ +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLG 281
Query: 312 FEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKV 365
+ G+E GR + P+GI + L + + +KEL + F R +
Sbjct: 282 LSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIM 341
Query: 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEI 425
+LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + ++ H
Sbjct: 342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHST 401
Query: 426 VGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD- 484
V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++ +
Sbjct: 402 VKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461
Query: 485 --------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPE 530
KK +L++SEF G + SL +GAI VNPWNI VA+A+ AL M+
Sbjct: 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEP 520
Query: 531 EREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRIKQVPPSLR 578
E++ RH ++ +V+TH WA +F+ +L T + R+ + P+ R
Sbjct: 521 EKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFR 580
Query: 579 EADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634
+ S+E Y R+ R ++L ++ TL + ++ LN L
Sbjct: 581 KL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI-----------LNTL 628
Query: 635 CHDPKTTIVVLSGSDRNVL 653
C D + ++S R L
Sbjct: 629 CRDKNNMVFIVSARSRKTL 647
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 2e-87
Identities = 175/496 (35%), Positives = 253/496 (51%), Gaps = 45/496 (9%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLG-VKEFEARWIGWAGVNVPDEIG-- 151
RL+VV+NR+ A + SAGGL +LG +K W GW+G E G
Sbjct: 3 RLVVVSNRI---APPDEHKA-----SAGGLAVGILGALKAAGGLWFGWSG-----ETGNE 49
Query: 152 QKALTKALAEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
+ L K F L E +YYN + N +LWP FHY L L Q R A
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA------- 102
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ Y++ N + AD + KD D++W HDYHL+ L++ + ++G+FLH PFP+
Sbjct: 103 -WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP 161
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF---VSACTRILGFEGTPEGVEDQGRLT 326
EI LP +LL + DL+GF T + F +S TR+ G + T
Sbjct: 162 EIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRT 221
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V +PIGI+ + I P+ + +L+ + + V+RLD KG+P++ LA+E
Sbjct: 222 EV--YPIGIEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
LE+ GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++
Sbjct: 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GVLILSEFAGAAQSLGAG 505
D L ++ +DV LVT LRDGMNLV+ E+VA QD GVL+LS+FAGAA L +
Sbjct: 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 397
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
A++VNP++ EVA A+ RAL M ER RH + + W E F+S+L
Sbjct: 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL------ 451
Query: 566 AQLRIKQVPPSLREAD 581
KQ+ P E+
Sbjct: 452 -----KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 6e-84
Identities = 148/502 (29%), Positives = 236/502 (47%), Gaps = 53/502 (10%)
Query: 99 VANRLPVSAIR--RGEDSWSLEISAGGLVSALLGVKEFEAR----WIGWAGVNVPDEIGQ 152
+ +RLP R G+ S G++ LL F W+ WA +
Sbjct: 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSF--FGDGRAGTWVAWAEHDENSGETF 58
Query: 153 KALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
+ AE + + L ++ V +Y+ WP+ H +F +
Sbjct: 59 DSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH--------------TFPER 104
Query: 211 F-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLH 263
F ++K N+ FA+ +G VW HDY+L +P +++ D+K+ +F H
Sbjct: 105 FQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHH 164
Query: 264 TPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQ- 322
TPFPS+++ LP R ++ ++L D +GFH Y +FV A ++ + D
Sbjct: 165 TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPR 224
Query: 323 --------------------GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
R+ ++ A P+G D ER AL ++ ++ ++ AG
Sbjct: 225 FITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAG 284
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 422
K++L +R+D KGI +KL A+E+ LE + GKV L+ VP + + Y L Q+
Sbjct: 285 VKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344
Query: 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
+ VGRINGRF + P+ RSL + + A +A+ DV +T LRDG+NLV+ E+VA
Sbjct: 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAA 404
Query: 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542
Q L GVL+LSEFAGAA L GA+L NP++ + I AL M E++ R F
Sbjct: 405 QGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDA 463
Query: 543 VTTHTAQEWAETFVSELNDTVV 564
V + Q WA+ F++ ++
Sbjct: 464 VNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 73/305 (23%), Positives = 113/305 (37%), Gaps = 47/305 (15%)
Query: 233 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 292
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 293 FHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVH 352
D + A + E G ++T + P G+D+ERF A ++
Sbjct: 142 LRRADR----IIAVSEATREELRELGGVPPEKITVI---PNGVDTERFRPAPRAARRRLG 194
Query: 353 IKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412
I E V+L V RL KG+ L A K +E D R +V D
Sbjct: 195 IPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV---------GDG 239
Query: 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGM 472
P + L + E+ + R + L ALYA DV ++ SL +G
Sbjct: 240 PLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVLPSLYEGF 288
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529
LV E +A G+ ++ S+ G + + G +LV P + +A AI R L+ P
Sbjct: 289 GLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLD-DP 342
Query: 530 EEREK 534
E R +
Sbjct: 343 ELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 47.3 bits (111), Expect = 2e-05
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 227 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 345 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 521
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 522 ARALNMSPEEREK 534
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 655 ---KVLDLVLF 662
V +L L
Sbjct: 52 LFFGVPNLGLA 62
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 447
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 508 LVNPWNITEVANAIARALNMSPEEREK 534
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.002
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 272 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 331 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 499
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 500 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 552
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 553 ETFVS 557
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 673 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.97 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.96 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.95 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.95 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.95 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.95 | |
| PLN02316 | 1036 | synthase/transferase | 99.95 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.95 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.95 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.95 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.94 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.94 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.94 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.94 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.93 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.93 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.93 | |
| PLN00142 | 815 | sucrose synthase | 99.92 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.92 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.92 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.92 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.92 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.91 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.91 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.91 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.91 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.91 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.91 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.9 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.9 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.9 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.9 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.9 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.89 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.89 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.89 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.89 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.88 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.88 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.88 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.88 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.88 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.88 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.87 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.87 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.87 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.87 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.87 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.87 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.87 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.86 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.86 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.85 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.85 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.85 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.85 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.85 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.85 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.84 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.84 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.83 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.82 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.81 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.8 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.79 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.76 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.76 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.74 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.61 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.57 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.5 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.47 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.44 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.42 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.42 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.41 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.41 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.4 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.33 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.31 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.3 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.29 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.27 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.26 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.16 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.15 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.14 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.14 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.13 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.09 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.09 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.07 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.96 | |
| PLN03017 | 366 | trehalose-phosphatase | 98.83 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.69 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.6 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.59 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.27 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.11 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.98 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 97.1 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.04 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 96.96 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.93 | |
| PLN02423 | 245 | phosphomannomutase | 96.89 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.87 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.8 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 96.77 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.76 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.74 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.69 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 96.63 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.47 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.46 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 96.38 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.24 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.09 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 96.07 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.04 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 96.03 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 96.0 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.99 | |
| PLN02887 | 580 | hydrolase family protein | 95.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 95.9 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.84 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 95.76 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.7 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.62 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.62 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.61 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 95.5 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.33 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 94.88 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 94.81 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.64 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.39 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.26 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 94.22 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.18 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 94.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 93.59 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 93.01 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.88 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 92.57 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.46 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 91.79 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 91.29 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.15 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 91.08 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 90.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 90.85 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 90.63 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 90.37 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 90.36 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.28 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 90.25 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 90.16 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 90.11 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 89.86 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.79 | |
| PRK06769 | 173 | hypothetical protein; Validated | 88.82 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 88.76 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.53 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 88.49 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 88.21 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 88.2 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 87.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 87.77 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 87.74 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 87.72 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 87.37 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 87.09 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 87.01 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 86.54 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 85.68 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 85.38 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 85.29 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 84.63 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 84.52 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 83.47 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 83.07 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 83.03 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 82.79 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 82.27 | |
| PLN02954 | 224 | phosphoserine phosphatase | 82.25 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 82.21 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 80.32 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-147 Score=1286.04 Aligned_cols=663 Identities=85% Similarity=1.306 Sum_probs=617.7
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccccchhccccCCCCCCcccccCCCCCC--
Q 005855 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (673)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (673)
||||+|+|++...+.+|++||+|+ ||||+.++++...++.+ +.+.++.|+++..+|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888899999999 99999999998666666 778899999999999999999999999998733
Q ss_pred CCCCCcccCCCCCCCCCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH
Q 005855 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (673)
Q Consensus 78 ~~~~~~~~~~~~~~~~~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~ 157 (673)
...++|.+++++..-++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 35688888888766689999999999999998888999999999999999999977899999999988776656666777
Q ss_pred hhcCceEEEEecChHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q 005855 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (673)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwv 237 (673)
.+.+++|+||||+++++++||+||||++|||+|||++..+.++....+.++.+|++|++||++||++|++.+++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88999999999999999999999999999999999854443332222334467999999999999999999999999999
Q ss_pred eCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCC
Q 005855 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (673)
Q Consensus 238 HDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~ 317 (673)
||||||+||++||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|.+++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccC
Q 005855 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (673)
Q Consensus 318 ~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~ 397 (673)
++.++||.++|.++|+|||++.|.+....+++++++++++++++++++|++|||||+.|||+++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHH
Q 005855 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (673)
Q Consensus 398 ~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~l 477 (673)
+|+||||+.|+|+++++|++|++++.++|++||++||+.+|.||+|+.+.++++++.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHH
Q 005855 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (673)
Q Consensus 478 EamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (673)
||||||.+++|+||+|||+|++++|+.+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+..|+++|++
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999998999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCcchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcC
Q 005855 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (673)
Q Consensus 558 ~L~~~~~~~~~~~~~~~~~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d 637 (673)
+|+.+..+.+.+..+.++.|+.+.++++|.++++|+|||||||||+|++++|+++..++.++.+.|+++++++|+.||+|
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998776666666667899999999999999999999999999999999997666777767889999999999999999
Q ss_pred CCCeEEEEcCCCHHhHHHHhcccccceeec
Q 005855 638 PKTTIVVLSGSDRNVLDKVLDLVLFIFFSG 667 (673)
Q Consensus 638 ~~n~V~ViSGR~~~~L~~~~~~~~~~~~~~ 667 (673)
|+|+|||||||++++|++||+.+ ++.|+|
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~-~L~LaA 666 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEF-DMWLAA 666 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCC-CceEEe
Confidence 99999999999999999999998 455544
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-130 Score=1152.07 Aligned_cols=559 Identities=37% Similarity=0.677 Sum_probs=513.1
Q ss_pred CCcEEEEEcCCCcceEecCC--CcEEEEecCCcHHHhhccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 005855 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (673)
Q Consensus 93 ~~rlivvsnrlP~~~~~~~~--g~~~~~~~~ggL~~~l~~~-~--~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (673)
++||||||||||+.++++++ ++|++++++|||+++|.++ . ..+++||||+|..++++++++.....+++|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999998653 6899999999999999977 3 47899999999887765444444666788999999
Q ss_pred ecChHHHHHHHHHHHHHhhHhhhcCCC-CCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCccchh
Q 005855 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (673)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~-~DvVwvHDyhl~l 244 (673)
||+++++++||+||||++|||+|||+. ..+ .....|+ .+|++|++||++||++|++.+++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~----~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSP----DLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCc----cccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999984 332 1123577 46999999999999999999998 6999999999999
Q ss_pred HHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCC----Ccee
Q 005855 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (673)
Q Consensus 245 lp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~----~~i~ 320 (673)
+|.+||+++|+++||||||||||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc--CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCc
Q 005855 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (673)
Q Consensus 321 ~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~ 398 (673)
|+||.++|.++|+|||++.|......+++.+++++++++++ ++++|++|||||+.|||.++|+||++||++||+|+++
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999899999999985 6899999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHH
Q 005855 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (673)
Q Consensus 399 v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lE 478 (673)
|+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccC---------------CCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 479 amA~~~~---------------~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
|+|||.+ ++|+||+|||+||+++| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999863 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred hhCCHHHHHHHHHHHHHHhHHHhh----------hcccc-----CCCCcchHHHHHHHhhccCeEEEEcccccccCCCCC
Q 005855 544 TTHTAQEWAETFVSELNDTVVEAQ----------LRIKQ-----VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (673)
Q Consensus 544 ~~~~~~~W~~~fl~~L~~~~~~~~----------~~~~~-----~~~~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~ 608 (673)
.+||+.+|+++||.+|+.+++.+. +.++. .+++|+++.++++|+++++|+|||||||||+|..+
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 11111 26889999999999999999999999999998753
Q ss_pred CCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccccceeec
Q 005855 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLFIFFSG 667 (673)
Q Consensus 609 p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~~~~~~ 667 (673)
....|+++++++|++||+|++|+|+|+|||+++.|++||+.++.+.++|
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laa 661 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAA 661 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEE
Confidence 2457889999999999999999999999999999999999987666654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-127 Score=1127.37 Aligned_cols=567 Identities=73% Similarity=1.200 Sum_probs=521.0
Q ss_pred CCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 005855 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (673)
Q Consensus 93 ~~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (673)
++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..+...+.+++|+|||| ++
T Consensus 10 ~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~ 88 (797)
T PLN03063 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NE 88 (797)
T ss_pred CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HH
Confidence 78999999999999888777999999999999999999966699999999987665545556677788999999999 99
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~ 252 (673)
++++||+||||++|||+|||++..+.+.......++.+|++|++||++||++|++.+++||+||||||||+++|++||++
T Consensus 89 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~ 168 (797)
T PLN03063 89 VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEY 168 (797)
T ss_pred HHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHh
Confidence 99999999999999999999843321111122234567999999999999999999999999999999999999999999
Q ss_pred CCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEee
Q 005855 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332 (673)
Q Consensus 253 ~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP 332 (673)
.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+++++++....++.++|+.++|.++|
T Consensus 169 ~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP 248 (797)
T PLN03063 169 NNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248 (797)
T ss_pred CCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999988777899999999999999
Q ss_pred cCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCCh
Q 005855 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412 (673)
Q Consensus 333 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~ 412 (673)
+|||++.|.+....+++.+..+.+++.++++++|++|||||+.||+..+|+||++|++++|+++++++|+||++|+++++
T Consensus 249 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~ 328 (797)
T PLN03063 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDV 328 (797)
T ss_pred cccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCch
Confidence 99999999987776777777778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEE
Q 005855 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (673)
Q Consensus 413 ~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVl 492 (673)
++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..++|++|+
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999878899999
Q ss_pred eCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHHhhhcccc
Q 005855 493 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572 (673)
Q Consensus 493 Se~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~~~~~~ 572 (673)
||++|+++++|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.|+++|..+..+.......
T Consensus 409 Se~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~ 488 (797)
T PLN03063 409 SEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488 (797)
T ss_pred eCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccC
Confidence 99999999997799999999999999999999999999999999999999999999999999999999988765544556
Q ss_pred CCCCcchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 573 ~~~~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
.++.|+.+.++++|+++++|+|||||||||+|+.++|.+ ...+.|+++++++|++||+||+|+|+|||||++++
T Consensus 489 ~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~ 562 (797)
T PLN03063 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK------EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI 562 (797)
T ss_pred CCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 678899999999999999999999999999998764411 14678999999999999999999999999999999
Q ss_pred HHHHhcccccceeec
Q 005855 653 LDKVLDLVLFIFFSG 667 (673)
Q Consensus 653 L~~~~~~~~~~~~~~ 667 (673)
|++||+..+ +.++|
T Consensus 563 L~~~~~~~~-l~l~a 576 (797)
T PLN03063 563 LDKNFGEYN-IWLAA 576 (797)
T ss_pred HHHHhCCCC-CcEEE
Confidence 999999864 54444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-118 Score=1049.20 Aligned_cols=550 Identities=43% Similarity=0.769 Sum_probs=509.1
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCceEEEEecC
Q 005855 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (673)
Q Consensus 94 ~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (673)
+||||||||+|+.++++ +|.|++++++|||+++|.++ +..+++||||+|...+.. .++..++..+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~-~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRE-DGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeec-CCceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 48999999999998865 46899999999999999998 778999999999775542 222334566789999999999
Q ss_pred hHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 005855 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (673)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (673)
++++++||+||||++|||+|||++... .|+ .+|++|++||++||++|++.++++|+||||||||+++|++|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999996443 477 55999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEE
Q 005855 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (673)
Q Consensus 250 r~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~ 329 (673)
|++.|+++||||+|+|||++++|+++|++++|++|||+||+|||||++|++||+++|.++++++.....++++|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 005855 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (673)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr 409 (673)
++|+|||++.|.+...++++.+..+.+++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||+|+|
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999998777777777778888888999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCce
Q 005855 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (673)
Q Consensus 410 ~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~ 489 (673)
++.++|+++++++++++++||++||+.+|.||+++.+.+++++++++|++|||||+||++||||||++||||||.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred EEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHHhhhc
Q 005855 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (673)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~~~ 569 (673)
+|+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+|++.|++++++++.+||+..|+++|++.|+++.+++...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999 689999999999999999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCcchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 570 ~~~~~~~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
....++.|+.+.++++|+++++|||+|||||||++...+| ..+.|+++++++|++|++||+|.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 2334577899999999999999999999999999987766 4678899999999999999999999999999
Q ss_pred HHhHHHHhccccc
Q 005855 650 RNVLDKVLDLVLF 662 (673)
Q Consensus 650 ~~~L~~~~~~~~~ 662 (673)
+..|+++|+.++.
T Consensus 542 ~~~l~~~~~~~~l 554 (726)
T PRK14501 542 RDTLERWFGDLPI 554 (726)
T ss_pred HHHHHHHhCCCCe
Confidence 9999999998763
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-117 Score=975.75 Aligned_cols=451 Identities=35% Similarity=0.639 Sum_probs=417.9
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHh-hcCceEEEEecCh
Q 005855 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDE 171 (673)
Q Consensus 94 ~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~ 171 (673)
+||||||||+|+.. +. +.++|||++||.++ +..+|+||||+|....++ . .+... -.+++|.||+|++
T Consensus 2 ~rLivVSNRlp~~~-----~~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~--~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----EH---KASAGGLAVGILGALKAAGGLWFGWSGETGNED--Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCC-----CC---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc--c-cchhhhcCCceEEEecCCH
Confidence 68999999999632 11 45789999999999 788999999999753321 1 12222 2568999999999
Q ss_pred HHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHH
Q 005855 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (673)
Q Consensus 172 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr 250 (673)
+++++||+||||++|||+|||+.... .|+ ++|++|++||++||++|++.+++||+||||||||+++|++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999996433 366 569999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEE
Q 005855 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (673)
Q Consensus 251 ~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~ 329 (673)
++.|+++||||||||||++|+|++||++++|++|||+||+|||||++|++||++||++++|++... ..+.++||.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987644 4567889999999
Q ss_pred EeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 005855 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (673)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr 409 (673)
++|+|||++.|...+..+ +....+.++++++++++|++||||||+|||+++|+||++||++||+++++|+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887755 4667788999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhcc-CCCc
Q 005855 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (673)
Q Consensus 410 ~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~-~~~g 488 (673)
+++++|++++++|+++|++||++||+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7889
Q ss_pred eEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 489 ~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||++|..+...
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 78999999999999999999999999999999999999999999999999999999987644
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-116 Score=973.36 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.6
Q ss_pred EEcCCCcceEecCCCc--EEEEecCCcHHHhhccc-c-cCCcEEEEeCCCCCCCchhh-HHHH-HhhcCceEEEEecChH
Q 005855 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (673)
Q Consensus 99 vsnrlP~~~~~~~~g~--~~~~~~~ggL~~~l~~~-~-~~~~~WvGw~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (673)
||||||+.++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++. .... ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 66799999999999988 4 47799999999753221111 1111 2235689999999999
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (673)
++++||+||||++|||+|||++... .|+ ++|++|++||++||++|++.++++|+||||||||+++|++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999996443 476 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCC--------------
Q 005855 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (673)
Q Consensus 252 ~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~-------------- 317 (673)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred -------ceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 318 -------~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
++.++||.++|.++|+|||++.|.+....+++.+.++.++++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999999888888888889999999999999999999999999999999999999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCc
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (673)
+||+++++++|||||.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++.+++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHH
Q 005855 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (673)
Q Consensus 471 Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (673)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999998889999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 005855 551 WAETFVSELND 561 (673)
Q Consensus 551 W~~~fl~~L~~ 561 (673)
|+++||++|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999999874
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-116 Score=975.23 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=355.8
Q ss_pred cEEEEEcCCCcceEecC-CCc--EEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCceEEEEe
Q 005855 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (673)
Q Consensus 95 rlivvsnrlP~~~~~~~-~g~--~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (673)
|+||||||||+.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999999876 676 88889999999999999 7789999999998776554 222334567899999999
Q ss_pred cChHHHHHHHHHHHHHhhHhhhcCCCC-CccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 005855 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (673)
Q Consensus 169 l~~~~~~~~Y~gf~n~~LWPlfH~~~~-~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (673)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||++||++|++.+++||+||||||||+++|
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999998742 11 112466 55999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCC--ceeeCCe
Q 005855 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (673)
Q Consensus 247 ~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~--~i~~~gr 324 (673)
++||++.|+++||||||||||++|+||+||++++||+|||+||+|||||++|++||++||++++|+++... ++.++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887654 7999999
Q ss_pred eeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 005855 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (673)
Q Consensus 325 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq 403 (673)
.++|.++|+|||++.|.+.+.++++.++.+++++++++ +++|++|||+|++|||+++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
|+.|+|+++++|++++++++++|++||++||+.+|+||+|+.+.++.+++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999955779999999999999999999999999999999999999999999999999999973
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-111 Score=918.63 Aligned_cols=462 Identities=50% Similarity=0.855 Sum_probs=430.1
Q ss_pred CCCCCcEEEEEcCCCcceEec-CCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 005855 90 TFSRQRLLVVANRLPVSAIRR-GEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (673)
Q Consensus 90 ~~~~~rlivvsnrlP~~~~~~-~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (673)
....+|+|+||||+|++..+. +++....+.++|||+++|.++ +..+++|+||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 344789999999999998643 466888899999999999999 778999999999887633333445555668999999
Q ss_pred ecChHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 005855 168 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (673)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (673)
.++.+++++||++|||++|||+|||+.... .|+ .+|+.|++||++||++|++.+++||+||||||||+++|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995432 366 45999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCcee---eCC
Q 005855 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 323 (673)
Q Consensus 247 ~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~---~~g 323 (673)
+|||++.|+++||||+|+|||++|+|+|||+|++|++||++||+|||||++|++||+.+|+++++.. ....++ ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 222333 447
Q ss_pred eeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEE
Q 005855 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (673)
Q Consensus 324 r~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lv 402 (673)
+.+++.++|+|||+..|.....++.++.++.++++.+.+ +++|++|||||+.||++++++||++||++||++++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999999888888888899988876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhh
Q 005855 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (673)
Q Consensus 403 qvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~ 482 (673)
||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||+.|||+++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
|.+++|+||+|||+|++.+| .+|++|||||.+++|++|.+||+|+.+||++|++.+++.|.+||+++|+.+|+++|..
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99889999999999999999 7899999999999999999999999999999999999999999999999999999986
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-107 Score=906.84 Aligned_cols=452 Identities=56% Similarity=0.926 Sum_probs=421.6
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHH-HHhhcCceEEEEecChH
Q 005855 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDED 172 (673)
Q Consensus 95 rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~ 172 (673)
||||||||+|+.++++ + ++.++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988654 2 567899999999998 778999999999866543322222 34567899999999999
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (673)
++++||+||||++|||+|||++... .|+ ++|++|++||++||++|.+.++++|+||||||||+++|++||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999996433 466 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEe
Q 005855 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (673)
Q Consensus 252 ~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~vi 331 (673)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999998888888999999999999
Q ss_pred ecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 005855 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (673)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~ 411 (673)
|+|||++.|.+....+++.+..+.++++++++++|++|||+++.||++.+|+||++|++++|+++++++|+|+|+|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777778889888999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEE
Q 005855 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (673)
Q Consensus 412 ~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lV 491 (673)
+++|+++++++++++++||++||+.+|.|++++.+.++.+++.++|++|||||+||++||||||++||||||...+|++|
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999866668899
Q ss_pred EeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHH
Q 005855 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (673)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 560 (673)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999999885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-98 Score=835.43 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=424.9
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChHH
Q 005855 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (673)
Q Consensus 95 rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (673)
||||||||+|+.++++++|.|+++.++|||+++|.++ +..+++||||+|...+.+++.........+++|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998889999999999999999998 777999999999877665444456667789999999999999
Q ss_pred HHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhh
Q 005855 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (673)
Q Consensus 174 ~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~ 252 (673)
++.||+||||++|||+|||++... .|+ ++|++|++||+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 366 56999999999999999999999999999999999999999999
Q ss_pred CCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEEe
Q 005855 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (673)
Q Consensus 253 ~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~vi 331 (673)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|+++|+++|+++++++... ..++++|+.+++.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987654 678899999999999
Q ss_pred ecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 005855 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (673)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~ 411 (673)
|+|||++.|.+...++++.+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666655556666667789999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEE
Q 005855 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (673)
Q Consensus 412 ~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lV 491 (673)
+++++++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||.+||||+|++||||||..++|++|
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999876778899
Q ss_pred EeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+|+++|+++++ .+|++|||+|++++|++|.++|+|+++|++.+++++++++.+||+..|+++|+++|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999985 89999999999999999999999999999999999999999999999999999887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-94 Score=823.57 Aligned_cols=554 Identities=46% Similarity=0.773 Sum_probs=515.7
Q ss_pred CCcEEEEEcCCCcceE-ecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecC
Q 005855 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (673)
Q Consensus 93 ~~rlivvsnrlP~~~~-~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (673)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.+. +..+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 44588999999999999999987 777899999999888887777778888899999999999
Q ss_pred hHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 005855 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (673)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (673)
++...++|++|||++|||+|||........ .. .|+ +.|++|+++|++||+++++.++++|+||+||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~--~~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPA--FK-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchh--hh-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 999999999999999999999993322111 11 344 56999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccC----CCceeeCCee
Q 005855 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (673)
Q Consensus 250 r~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~----~~~i~~~gr~ 325 (673)
|++..+++||||+|.|||++|+|+++|.+++|+.+|+++|+||||+++|++||+++|.|+++++.. ..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568899999
Q ss_pred eEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 005855 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (673)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg 405 (673)
+.|.++|+|||+.+|......+.+..+..+++..++++++|++|||+|+.||+.+++.||++++++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccC
Q 005855 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (673)
Q Consensus 406 ~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~ 485 (673)
.|+++++.+|++++.++..++.+||++||+..+.||+++...++..++.++|.+||++++++++|||||+++||.+|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 486 ~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+.+++|+|+|.|+.+.++.+++++||||.+++|.+|..+|+|+.+|+..|+...+.++..|+...|+.+|++.|++.++.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999999888877
Q ss_pred hhhccccCCCCcchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEE
Q 005855 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (673)
Q Consensus 566 ~~~~~~~~~~~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~Vi 645 (673)
.. ...++++.|..+.++..|+++++|+|+||||||+++.. | ..+...|+.||+||+|+|||+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--S---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCCC--C---------------chHHHHHHHHhcCCCCeEEEE
Confidence 65 33445566899999999999999999999998877642 2 129999999999999999999
Q ss_pred cCCCHHhHHHHhcccccceeec
Q 005855 646 SGSDRNVLDKVLDLVLFIFFSG 667 (673)
Q Consensus 646 SGR~~~~L~~~~~~~~~~~~~~ 667 (673)
|||++.+|++|+..++++.++|
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~a 562 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAA 562 (732)
T ss_pred EccCchhhhhhccccccceeec
Confidence 9999999999999999999886
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=282.14 Aligned_cols=311 Identities=14% Similarity=0.140 Sum_probs=216.5
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhc-----------------CCcchHH-HHhhhcCCEEEE
Q 005855 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----------------LPSRSDL-LRAVLAADLVGF 293 (673)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~-----------------lp~r~~i-l~~ll~aDlIgF 293 (673)
.|+||.|+++--.++..|++.. ++|.+++.|.- ..+-++. ++.|-+. -..+..||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999888888888765 57888888863 1121110 1112111 234678999999
Q ss_pred eCHHHHHHHHHHH-------HHHhccccCCCceeeCCe-eeEEEEeecCcChhhhhhhhcCChh-------------HHH
Q 005855 294 HTYDYARHFVSAC-------TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPV-------------QVH 352 (673)
Q Consensus 294 ~t~~~~~~Fl~~~-------~r~l~~~~~~~~i~~~gr-~~~v~viP~GID~~~f~~~~~~~~~-------------~~~ 352 (673)
.|..........- .+.|.. ....++..+|+ ..++.|||+|||++.|.+.....+. ...
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 9987766433210 011100 00123333332 2389999999999999874321110 001
Q ss_pred HHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 005855 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (673)
Q Consensus 353 ~~~lr~~~--~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey----~~l~~~l~~lv 426 (673)
...+++.+ +++++|++|||+++.||+..+|+||..+.+..+. .++++ ++|... +..+. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~--~nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLREL--ANLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccC--CCEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 11233333 5788999999999999999999999998654321 13443 455321 11111 12234555665
Q ss_pred HhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc----CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc
Q 005855 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (673)
Q Consensus 427 ~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l 502 (673)
.+.+- .+ .|. |.|.++.++++++|+.| ||||+||++||||++++|||||| .|+|+|+.+|..+.+
T Consensus 542 ~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 55432 12 244 57899999999999988 69999999999999999999995 999999999999888
Q ss_pred --cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhH
Q 005855 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (673)
Q Consensus 503 --g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 563 (673)
|.+|++|+|.|++++|++|.++|+.+ +.++++.+++++.+.+|++...+++|++.+..+.
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~ 672 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCR 672 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHh
Confidence 67899999999999999999999854 4667777888899999999999999998887764
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-27 Score=254.62 Aligned_cols=300 Identities=23% Similarity=0.209 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCC
Q 005855 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (673)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aD 289 (673)
.+..|...+..++.++... ...|+||+|+++.+.++...+. .+.++.+++|+++.... +. ....+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~~--~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLLD-LDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--RR--VWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccccc-CCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--HH--HHHHHHHHHHhCC
Confidence 4667777777776653222 2569999999998777666543 36788899999875321 10 1122334455688
Q ss_pred EEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceE
Q 005855 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (673)
Q Consensus 290 lIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 366 (673)
.+.+.+.+++..+ +. ..++ ++|+|||+........+ ......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~------------------~~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ------------------VP--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC------------------CC--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 8777663322111 01 1234 89999997532211111 12233445555 378899
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCC
Q 005855 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (673)
Q Consensus 367 l~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (673)
++|||+++.||+..+++|++.+.+++|++ .|+++|.+...+ +++.++.+++.+ ..+. . ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~~~~---~~~~----~--~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEEVLE---YAEG----D--PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHHHHH---HhCC----C--CCeEEEec
Confidence 99999999999999999999998877764 588888654221 233333333322 2111 1 13565543
Q ss_pred C-CCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHH
Q 005855 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (673)
Q Consensus 447 ~-v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~ 523 (673)
. ++.+++.++|++||+|++||.+||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 489999999999999999999999999999999995 899999999999888 578999874 6788999999
Q ss_pred HhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHH
Q 005855 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (673)
Q Consensus 524 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 561 (673)
++++ ++++.++.+++++++ ++|+++..++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457778888888887 579999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-26 Score=256.49 Aligned_cols=310 Identities=22% Similarity=0.258 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhC----CCCeEEeEeccCCC----chhhhhcC--Cc---------
Q 005855 217 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFP----SSEIHRTL--PS--------- 277 (673)
Q Consensus 217 vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~----~~~~Ig~flH~PfP----~~e~fr~l--p~--------- 277 (673)
.++...+.+...-...|+||+||||..++|.++++.. .+.++.++.|..-. +.+.+..+ |+
T Consensus 104 f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 104 FSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3333334333322367999999999999999998653 46899999998621 11111111 10
Q ss_pred ----chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeecCcChhhhhhhhcCC----
Q 005855 278 ----RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN---- 347 (673)
Q Consensus 278 ----r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~~~~~---- 347 (673)
..-+..++..||.|...++.+++..... ..| .++. +..+..++.+||||||++.|.+.....
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~ 255 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAAN 255 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccc
Confidence 1112335677888887777766543210 000 0000 112345799999999999987642100
Q ss_pred -------hhHHHHHHHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH
Q 005855 348 -------PVQVHIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 416 (673)
Q Consensus 348 -------~~~~~~~~lr~~~~----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~ 416 (673)
...+..+.++++++ +.++|++|||+++.||++.+++|+++++++ ++.|+++|.+. +
T Consensus 256 ~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g~----~--- 322 (466)
T PRK00654 256 YSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTGD----P--- 322 (466)
T ss_pred cChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecCc----H---
Confidence 00112334566553 568999999999999999999999998753 35688887421 2
Q ss_pred HHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCC
Q 005855 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (673)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a 496 (673)
.+++++++++.+.+. .+.++.+. +.+....+|+.||++|+||.+||||++.+|||+|| .|+|+|+.+
T Consensus 323 ~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~g 389 (466)
T PRK00654 323 ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTG 389 (466)
T ss_pred HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCC
Confidence 234566666655431 24444454 66667899999999999999999999999999995 899999999
Q ss_pred Cchhhc--c------CceEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 497 GAAQSL--G------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 497 G~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
|..+.+ + .+|++|+|.|+++++++|.++++. .++.+.++..+++ ...++++.-++++++..+++
T Consensus 390 G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 390 GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999988 4 569999999999999999999863 2223444333332 25788888888887766554
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=261.70 Aligned_cols=321 Identities=16% Similarity=0.183 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhh-----CCCCeEEeEeccC-----CCchhhh-hcCCcc-
Q 005855 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR- 278 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~Ig~flH~P-----fP~~e~f-r~lp~r- 278 (673)
...|.-+.++.++.+.+.-...||||+||||..++|.++++. +.++++.|++|.- ||...+. ..+|+.
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 445555566666655544345699999999999986555432 3567899999975 2221111 112211
Q ss_pred ---------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhh
Q 005855 279 ---------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (673)
Q Consensus 279 ---------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~ 343 (673)
..+..++..||.|..-++.|++.... ..-.|++. .+..+..++.+||||||++.|.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPa 742 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPS 742 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCc
Confidence 11234677899999999999887553 11011110 022345688999999999999875
Q ss_pred hcC--------Chh---HHHHHHHHHHhc------CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 005855 344 LEI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (673)
Q Consensus 344 ~~~--------~~~---~~~~~~lr~~~~------~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~ 406 (673)
... .+. ......++++++ +.++|++|||+.+.||+..+++|+..+++ + ++.|+++|.
T Consensus 743 tD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~----dvqLVIvGd 816 (977)
T PLN02939 743 TDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L----GGQFVLLGS 816 (977)
T ss_pred cccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c----CCEEEEEeC
Confidence 310 000 011234666663 35899999999999999999999998874 2 356888874
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCC
Q 005855 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (673)
Q Consensus 407 psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~ 486 (673)
+ ++ ..+++++++++.+.+. . ..|.| .+..+......+|+.||+||+||.+||||++++|||+||
T Consensus 817 G-----p~-~~~e~eL~~La~~l~l----~--drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG--- 880 (977)
T PLN02939 817 S-----PV-PHIQREFEGIADQFQS----N--NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG--- 880 (977)
T ss_pred C-----Cc-HHHHHHHHHHHHHcCC----C--CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC---
Confidence 2 21 1345566666665432 1 13554 567787778899999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc-----------cCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHhhHHHhhCCHHHHH
Q 005855 487 KGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWA 552 (673)
Q Consensus 487 ~g~lVlSe~aG~~~~l-----------g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W~ 552 (673)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+..+.++. ....+++...+
T Consensus 881 -tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A 957 (977)
T PLN02939 881 -SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSA 957 (977)
T ss_pred -CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHH
Confidence 799999999998766 247999999999999999999986 2344444444432 34678999999
Q ss_pred HHHHHHHHHhH
Q 005855 553 ETFVSELNDTV 563 (673)
Q Consensus 553 ~~fl~~L~~~~ 563 (673)
+.|++....+.
T Consensus 958 ~qYeeLY~~ll 968 (977)
T PLN02939 958 SQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH
Confidence 99887766654
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-26 Score=252.24 Aligned_cols=311 Identities=15% Similarity=0.164 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchh--hhh------------cCCcch-HH
Q 005855 217 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRS-DL 281 (673)
Q Consensus 217 vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e--~fr------------~lp~r~-~i 281 (673)
+...+...+.+.....|+||+|+++..++..++++.. +.++.++.|....... +.. .+..+- ..
T Consensus 100 ~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (439)
T TIGR02472 100 LADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAE 178 (439)
T ss_pred HHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHH
Confidence 3333434443333346999999988777777776654 5788999997432110 000 000000 01
Q ss_pred HHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-
Q 005855 282 LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF- 360 (673)
Q Consensus 282 l~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~- 360 (673)
...+..+|.|...+...+..-+ ....+ -...++.++|+|||++.|.+....+......+.+++..
T Consensus 179 ~~~~~~ad~ii~~s~~~~~~~~---~~~~~-----------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~ 244 (439)
T TIGR02472 179 EETLAHASLVITSTHQEIEEQY---ALYDS-----------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLK 244 (439)
T ss_pred HHHHHhCCEEEECCHHHHHHHH---HhccC-----------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhcc
Confidence 1234567776665543322111 00001 12457899999999999976432221111111122211
Q ss_pred -cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH----HHHHHHHHHHHhhccccCC
Q 005855 361 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGRFGT 435 (673)
Q Consensus 361 -~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~----~l~~~l~~lv~~IN~~~g~ 435 (673)
+++++|++|||+++.||+..+|+||..+.+..+. .+++ +++|.+. +.++++ ++.+++.+++.+++ .
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~--~~l~-li~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~----l 315 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEM--ANLV-LVLGCRD--DIRKMESQQREVLQKVLLLIDRYD----L 315 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhh--ccEE-EEeCCcc--ccccccHHHHHHHHHHHHHHHHcC----C
Confidence 4678999999999999999999999865321111 1232 2344211 111111 22333444544432 2
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHc----CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEE
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (673)
.+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|+.+.+ |.+|++|
T Consensus 316 ~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~lv 388 (439)
T TIGR02472 316 YG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNGLLV 388 (439)
T ss_pred Cc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEEe
Confidence 22 244 57889999999999988 99999999999999999999995 899999999999888 4689999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHH
Q 005855 510 NPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (673)
Q Consensus 510 nP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 559 (673)
+|.|++++|++|.++++++ +++.++.+++++++ ++|+++.-+++|++.|
T Consensus 389 ~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 389 DVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999865 47777888888877 5688888888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-25 Score=244.22 Aligned_cols=273 Identities=18% Similarity=0.219 Sum_probs=203.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
...|+|++|+.. .+...++++.+.+++.+.+|..|.. +.+ ..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445577888999999999987532 111 235777776643 333322 11
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~ 386 (673)
+ ...++.++|+|||.+.|.+... ..+++.+ .++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~~--------~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNPQ--------PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcch--------HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 1235789999999988864211 1223333 26789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEc
Q 005855 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (673)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (673)
++.+++|++ .|+++|.+......+...+.+++++++.+++. .++ +.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 58888865432222334566677777665432 354 56889999999999999999999
Q ss_pred CCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 467 SLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 467 Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gl-lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
|.+ ||||++++|||||| .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.++.+++++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 975 99999999999995 899999999988877 56787 6789999999999999998764 45667777766
Q ss_pred H-hhCCHHHHHHHHHHHHHHh
Q 005855 543 V-TTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 543 v-~~~~~~~W~~~fl~~L~~~ 562 (673)
+ ++|++..-++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 5 6789999999998888653
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=264.27 Aligned_cols=310 Identities=15% Similarity=0.130 Sum_probs=221.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhh-----CCCCeEEeEeccCCCchhhhhcCCcchHHHHh
Q 005855 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (673)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ 284 (673)
....|-.++++.++.+.+.-...||||+||+|..++|.++++. ..+.++.+++|..-. . ...+-.+
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~-----~----~n~lk~~ 758 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-----G----ANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-----c----hhHHHHH
Confidence 3455556666666666554345699999999999999999874 356899999996421 1 1224456
Q ss_pred hhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC-------Ch-h----HHH
Q 005855 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-------NP-V----QVH 352 (673)
Q Consensus 285 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~-------~~-~----~~~ 352 (673)
+..||.|.--++.|++..... + . ...+..++.+||||||++.|.+.... .+ . ...
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 788999999999887765420 0 0 01124578999999999988764210 00 0 111
Q ss_pred HHHHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHh
Q 005855 353 IKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 428 (673)
Q Consensus 353 ~~~lr~~~~----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~ 428 (673)
...++++++ +.++|++||||++.||+..+++|+.++++. ++.||++|.+ |+ ..++.++++++.+
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~------~~qlVIvG~G-----pd-~~~e~~l~~La~~ 893 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER------NGQVVLLGSA-----PD-PRIQNDFVNLANQ 893 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc------CcEEEEEeCC-----CC-HHHHHHHHHHHHH
Confidence 234666663 568999999999999999999999998853 2567777743 22 1345667777776
Q ss_pred hccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c---
Q 005855 429 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G--- 503 (673)
Q Consensus 429 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g--- 503 (673)
++..+.. .|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|| .|+|++..+|..+.+ +
T Consensus 894 Lg~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~ 964 (1036)
T PLN02316 894 LHSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHD 964 (1036)
T ss_pred hCccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhccccccc
Confidence 5543321 2444 344454444589999999999999999999999999994 799999999999987 2
Q ss_pred ----------CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHHh
Q 005855 504 ----------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 504 ----------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 562 (673)
.+|++|+|.|+++++++|.++|....+.+..+.+..++.+ .++++..-+++|++..+.+
T Consensus 965 ~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 965 KERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred cccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999864333334344445554 5688888888888776654
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-26 Score=253.80 Aligned_cols=312 Identities=21% Similarity=0.270 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhCC--CCeEEeEeccCCC----chhhhhcC--Ccc-------
Q 005855 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRTL--PSR------- 278 (673)
Q Consensus 214 Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~--~~~Ig~flH~PfP----~~e~fr~l--p~r------- 278 (673)
+...+++.++.+.+.-...|+||+||||..++|.+++.... +.++.++.|...+ +.+.+..+ |+.
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33445555554444333569999999999999999988765 3899999998642 12222221 110
Q ss_pred ------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeecCcChhhhhhhhcCC---
Q 005855 279 ------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 347 (673)
Q Consensus 279 ------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~~~~~--- 347 (673)
..+..++..||.|...++.+++..... ..+ .++. +..+..++.+||||||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 012335677888877777766554320 000 0010 011345789999999999987642100
Q ss_pred --------hhHHHHHHHHHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHH
Q 005855 348 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 414 (673)
Q Consensus 348 --------~~~~~~~~lr~~~~-----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~e 414 (673)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++ ++.|+++|.+. +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------~~~lvi~G~g~----~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL------GGQLVVLGTGD----P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc------CcEEEEECCCC----H-
Confidence 00112234565553 678999999999999999999999998754 25688887431 2
Q ss_pred HHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC
Q 005855 415 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (673)
Q Consensus 415 y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe 494 (673)
.+++++++++.+.+. .+.++ +..+.+++..+|+.||++++||.+||||++.+|||+|+ .|+|+|.
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 345566666644221 24443 45688889999999999999999999999999999995 8999999
Q ss_pred CCCchhhc--c------CceEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 495 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 495 ~aG~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
.+|..+.+ + .+|++++|.|++++|++|.+++.+ .++.++++.+++. .++++++.-++++++..++
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 99999988 4 679999999999999999999873 3334444444432 3578888888888776553
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=254.03 Aligned_cols=323 Identities=14% Similarity=0.182 Sum_probs=219.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhC------CCCeEEeEeccCCC----chhhhh-cC
Q 005855 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFP----SSEIHR-TL 275 (673)
Q Consensus 207 ~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~------~~~~Ig~flH~PfP----~~e~fr-~l 275 (673)
|.+....|.-.+++.++.+.+.--..|+||+||||..++|.++++.. .+++++++.|.... +.+.+. .+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44456666666777777665432245999999999999999998753 47899999998521 111111 12
Q ss_pred Ccc------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhh
Q 005855 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (673)
Q Consensus 276 p~r------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~ 343 (673)
|+. .-+-.++..||.|..-++.|++........-.|++ . .+..+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~----~-~l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD----K-VLEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH----H-HHHhcCCCeeEEeCCccccccCCc
Confidence 211 12334678889988888887765432000000110 0 011135688999999999999864
Q ss_pred hcCC--------hh---HHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcC
Q 005855 344 LEIN--------PV---QVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (673)
Q Consensus 344 ~~~~--------~~---~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~p 407 (673)
.... .. ......+++.+ +++++|++|||+++.||++.+++|+.++++. ++.|+++|.+
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G 345 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGSG 345 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCC
Confidence 3110 00 01122344444 2567999999999999999999999998752 3668888842
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCC
Q 005855 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (673)
Q Consensus 408 sr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~ 487 (673)
+. .+++++++++.+... .|. +.+.++.+++..+|+.||+||+||.+||||++.+|||+|+
T Consensus 346 -----~~--~~~~~l~~l~~~~~~--------~V~-~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G---- 405 (489)
T PRK14098 346 -----DK--EYEKRFQDFAEEHPE--------QVS-VQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG---- 405 (489)
T ss_pred -----CH--HHHHHHHHHHHHCCC--------CEE-EEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----
Confidence 21 234566666654321 255 3567899999999999999999999999999999999994
Q ss_pred ceEEEeCCCCchhhc------cCceEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 488 GVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 488 g~lVlSe~aG~~~~l------g~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
.|+|++..+|..+.+ +.+|++|+|.|++++|++|.+++.+ .++....+.++. ..++++++.-++++++..
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 789999999998876 3579999999999999999998742 232333332222 235788888888887766
Q ss_pred HHh
Q 005855 560 NDT 562 (673)
Q Consensus 560 ~~~ 562 (673)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 554
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-25 Score=245.28 Aligned_cols=285 Identities=16% Similarity=0.116 Sum_probs=206.7
Q ss_pred HHHHHhcC--CCCEEEEeCccchhHHHHHHhh-CCCCeEEeEeccCCCc-hhhhhcCCcchHHHHhhhcCCEEEEeCHHH
Q 005855 223 DVVNKHYK--DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPS-SEIHRTLPSRSDLLRAVLAADLVGFHTYDY 298 (673)
Q Consensus 223 ~~i~~~~~--~~DvVwvHDyhl~llp~~Lr~~-~~~~~Ig~flH~PfP~-~e~fr~lp~r~~il~~ll~aDlIgF~t~~~ 298 (673)
-.+.+..+ +.|+||+|..+.-.+..++++. ....++.+++|.+... ..+.. ..+..+-.-+..+|.|...+...
T Consensus 108 ~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~ 185 (406)
T PRK15427 108 AICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLW 185 (406)
T ss_pred HHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHH
Confidence 33444443 4699999998877777777763 2234567788865221 11110 01112333456799988877654
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCCh
Q 005855 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 378 (673)
...+.+ ++. ...++.++|+|||.+.|.+.... ...+...|++|||+.+.||+
T Consensus 186 ~~~l~~-----~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~ 237 (406)
T PRK15427 186 AGRLQK-----MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGL 237 (406)
T ss_pred HHHHHH-----cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCH
Confidence 443321 121 23578899999999988642110 11345679999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (673)
..+++|++.+.+++|+ +.|+++|. ++.. +++++++.+.+- ...+.|.|.++.+++..+|+
T Consensus 238 ~~ll~a~~~l~~~~~~----~~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~ 297 (406)
T PRK15427 238 HVAIEACRQLKEQGVA----FRYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLD 297 (406)
T ss_pred HHHHHHHHHHHhhCCC----EEEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHH
Confidence 9999999999887775 45888873 3333 344445444321 13344689999999999999
Q ss_pred HcCEEEEcCCC------cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHH
Q 005855 459 VTDVALVTSLR------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPE 530 (673)
Q Consensus 459 ~ADv~vv~Sl~------EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~ 530 (673)
.||+||+||.. ||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++++++
T Consensus 298 ~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~ 373 (406)
T PRK15427 298 DADVFLLPSVTGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTD 373 (406)
T ss_pred hCCEEEECCccCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHH
Confidence 99999999984 99999999999995 899999999999888 6789999999999999999999996677
Q ss_pred HHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHH
Q 005855 531 EREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (673)
Q Consensus 531 er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 561 (673)
+++++.+++++++ .+|+++..++++.+.+++
T Consensus 374 ~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 374 ELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 8888888998887 568999888888776653
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-24 Score=236.87 Aligned_cols=289 Identities=19% Similarity=0.198 Sum_probs=211.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhh---cCCc--chHHH--HhhhcCCEEEEeCHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLL--RAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr---~lp~--r~~il--~~ll~aDlIgF~t~~~~~~Fl 303 (673)
..|+||+|++....++.++++. .+.++.+.+|..++-...+. ..+. ...++ ..+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999997666666666543 45788888996532111110 0111 11222 235679999999987776664
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 005855 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 304 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 380 (673)
. ..+. ...++.++|+|||.+.|.+.. . ...+.++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD-----R---ATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc-----H---HHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235788999999999886431 0 1123333 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCCh-HHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 005855 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (673)
Q Consensus 381 ~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~-~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (673)
+++|++++++++|+. ++.|+++|.+.. ++ ++. +++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999888872 478998986542 23 333 3344444443311 1244 5789999999999999
Q ss_pred cCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 460 ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
||++++||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++.+ +++.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999995 899999999988877 56799999999999999999999854 46667777
Q ss_pred HhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
++++.+++++++..++++++.+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888899999999888777654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-24 Score=243.69 Aligned_cols=294 Identities=21% Similarity=0.240 Sum_probs=198.7
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEeEeccC-----CCchhhhhc--CCcc-------------hHHHHhhhcCC
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPSR-------------SDLLRAVLAAD 289 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~Ig~flH~P-----fP~~e~fr~--lp~r-------------~~il~~ll~aD 289 (673)
..||||+||||..++|.+++.. ..+.+++++.|.. ||. ..+.. +|+. .-+..++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 4599999999999999998753 3467899999974 221 11111 1110 11344567788
Q ss_pred EEEEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeecCcChhhhhhhhcCC-------h-h---HHHHHHH
Q 005855 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-------P-V---QVHIKEL 356 (673)
Q Consensus 290 lIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~~~~~-------~-~---~~~~~~l 356 (673)
.|.-.++.+++..... ..| .++. +..+..++.+||||||++.|.+..... + . ....+.+
T Consensus 212 ~vitVS~~~a~ei~~~---~~g-----~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 212 RITTVSPTYALEIQGP---EAG-----MGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eeeecChhHHHHHhcc---cCC-----cChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 8777777666543210 000 0000 111345799999999999998743210 0 0 0112345
Q ss_pred HHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcc
Q 005855 357 QETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (673)
Q Consensus 357 r~~~~-----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~ 431 (673)
+++++ +.++|++||||++.||+..+++|+.++++. ++.|+++|.+ + + .+++++++++.+...
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~ 350 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG 350 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC
Confidence 55552 356888999999999999999999998753 3568888742 1 2 244556666544221
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHH-HHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c-----
Q 005855 432 RFGTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 503 (673)
Q Consensus 432 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g----- 503 (673)
.+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|| .|+|+|..+|..+.+ +
T Consensus 351 --------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~ 416 (485)
T PRK14099 351 --------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAI 416 (485)
T ss_pred --------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccc
Confidence 24445565 57888877 56999999999999999999999994 688999999998877 2
Q ss_pred ----CceEEECCCCHHHHHHHHHHH---hcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhH
Q 005855 504 ----AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (673)
Q Consensus 504 ----~~gllVnP~D~~~lA~aI~~a---L~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 563 (673)
.+|++|+|.|++++|++|.++ ++. ++.++++.++++ .++++++.-++++++..+++.
T Consensus 417 ~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 417 ATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred ccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 369999999999999999984 433 445555554443 467888888888887766654
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-25 Score=241.05 Aligned_cols=284 Identities=17% Similarity=0.180 Sum_probs=196.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCc--hhh-hh-cCCcc--------hH---HHHhhhcCCEEEEeC
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~--~e~-fr-~lp~r--------~~---il~~ll~aDlIgF~t 295 (673)
..|+|++|. .+....++++..|++++..++|..+-. .+. |. ..+.+ .. ....+..+|.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 359999994 555666789999999888877644311 110 10 11111 11 224567788888776
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHH---hcCCceEEEeec-
Q 005855 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDR- 371 (673)
Q Consensus 296 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~iIl~VgR- 371 (673)
......|.. . + ..++.++|+|||.+.|.+.... ...++.. ..++++|+++||
T Consensus 165 ~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 544333211 0 1 1478899999999998764211 0111111 136788999998
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChH--H-HHHHHHHHHHHHHhhccccCCCCcccEEEeCCCC
Q 005855 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP--E-YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (673)
Q Consensus 372 Ld~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~--e-y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (673)
+.+.||+..+++|+..+.+++|++ .|+++|......+. + ...+++. +..+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---cceEE-EeCCC
Confidence 999999999999999999888865 48888853211000 0 0011111 2222221111 12355 57899
Q ss_pred CHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
+.+++.++|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999995 899999999988888 468999999999999999999998
Q ss_pred CCHHHHHHHHHHhhHHHhh-CCHHHHHHHHH
Q 005855 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (673)
Q Consensus 527 m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (673)
++ +++..+.+++++++.+ +++...+++|+
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5778888889999876 77666666654
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-24 Score=240.21 Aligned_cols=313 Identities=22% Similarity=0.247 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhC-----CCCeEEeEeccCCCc----hhhhhc--CCc--
Q 005855 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPS----SEIHRT--LPS-- 277 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~-----~~~~Ig~flH~PfP~----~e~fr~--lp~-- 277 (673)
...|...++...+.+.+.-...|+||+||+|..++|.+++... .+.++.+..|.+.+. ...+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 3344445555555555443467999999999999999998874 578999999987431 111111 111
Q ss_pred ------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeecCcChhhhhhh
Q 005855 278 ------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRA 343 (673)
Q Consensus 278 ------------r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~ 343 (673)
..-+..++..||.|...++.+++...+. .. ..++. ...+..++.++|||||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 0123344667888877777766654320 00 00110 11234689999999999998764
Q ss_pred hcCC-----------hhHHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcC
Q 005855 344 LEIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (673)
Q Consensus 344 ~~~~-----------~~~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~p 407 (673)
.... .-......+++++ .++++|+++||+.+.||+..+++|++++.++. +.|+++|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 334 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG 334 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC
Confidence 3211 0011223455554 36789999999999999999999999987642 568888743
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCC
Q 005855 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (673)
Q Consensus 408 sr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~ 487 (673)
+ + .+.+.+++++.+.. ..++++.+ .+.+++..+|+.||++++||.+||||++.+|||+|+
T Consensus 335 ---~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G---- 394 (476)
T cd03791 335 ---D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG---- 394 (476)
T ss_pred ---C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----
Confidence 1 2 33455555554421 13555544 457788899999999999999999999999999995
Q ss_pred ceEEEeCCCCchhhc--cC------ceEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHhhHHHhhCCHHHHHHHHHH
Q 005855 488 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (673)
Q Consensus 488 g~lVlSe~aG~~~~l--g~------~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (673)
.|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.+++.+ ..++++.-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 899999999999988 34 899999999999999999998643 2333333333322 35777777777766
Q ss_pred HH
Q 005855 558 EL 559 (673)
Q Consensus 558 ~L 559 (673)
..
T Consensus 473 ~y 474 (476)
T cd03791 473 LY 474 (476)
T ss_pred HH
Confidence 54
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=243.38 Aligned_cols=327 Identities=15% Similarity=0.153 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCC----chhh-hhcCC------cc-hHHH
Q 005855 216 KANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSEI-HRTLP------SR-SDLL 282 (673)
Q Consensus 216 ~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP----~~e~-fr~lp------~r-~~il 282 (673)
.+....++.+.... ...|+||.|.+.--+++..++++. +++..+..|..-. .... +..+. .+ ..-+
T Consensus 369 ~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~ 447 (784)
T TIGR02470 369 TFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADL 447 (784)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHH
Confidence 33344444443332 246999999988888888887765 4776666775411 1110 01010 01 0012
Q ss_pred HhhhcCCEEEEeCHHHHHHHHHHHHHHhcc--ccCCCce-e-eCC---eeeEEEEeecCcChhhhhhhhcCChhH-HHH-
Q 005855 283 RAVLAADLVGFHTYDYARHFVSACTRILGF--EGTPEGV-E-DQG---RLTRVAAFPIGIDSERFIRALEINPVQ-VHI- 353 (673)
Q Consensus 283 ~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~--~~~~~~i-~-~~g---r~~~v~viP~GID~~~f~~~~~~~~~~-~~~- 353 (673)
..|..||.|.-.|+.....-...+..+ +. ..+..++ . .+| ...|+.++|+|+|++.|.+........ ...
T Consensus 448 ~~~~~AD~IItsT~qEi~~~~~~v~qY-~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~ 526 (784)
T TIGR02470 448 IAMNAADFIITSTYQEIAGTKDSVGQY-ESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHP 526 (784)
T ss_pred HHHhcCCEEEECcHHHhhhhhhhhhhh-hhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhc
Confidence 557789999988864432111111100 00 0000011 0 111 224889999999999998743211100 000
Q ss_pred ---------HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC---ChHHHH
Q 005855 354 ---------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT---DVPEYQ 416 (673)
Q Consensus 354 ---------~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~---~~~ey~ 416 (673)
...++.+ +++++|++|||+++.||+..+++||.++.+. +.++.|++||++... ...+..
T Consensus 527 ~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l----~~~~~LVIVGGg~~~~~s~d~ee~ 602 (784)
T TIGR02470 527 EIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKL----RELVNLVVVAGKLDAKESKDREEQ 602 (784)
T ss_pred chhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhh----CCCeEEEEEeCCcccccccchhHH
Confidence 0111222 3678999999999999999999999876433 234678988865321 111222
Q ss_pred HHHHHHHHHHHhhccccCCCCcccEEEeCCC-CCHHHHHHHHH----HcCEEEEcCCCcCCChhHHHHHhhccCCCceEE
Q 005855 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (673)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~-v~~~el~aly~----~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lV 491 (673)
+..+++.+++.+.+ ..+ .|.+ .|. .+..++..+|+ .+||||+||.+||||+|++|||||| .|+|
T Consensus 603 ~~i~~L~~la~~~g----L~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG----lPVV 671 (784)
T TIGR02470 603 AEIEKMHNLIDQYQ----LHG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG----LPTF 671 (784)
T ss_pred HHHHHHHHHHHHhC----CCC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC----CCEE
Confidence 33445666665533 222 3554 454 45666667775 2479999999999999999999995 9999
Q ss_pred EeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHH
Q 005855 492 LSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (673)
Q Consensus 492 lSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 559 (673)
+|..+|..+++ |.+|++|+|.|++++|++|.++++ ..++.+.++.+++++++ ++|+|...++++++..
T Consensus 672 AT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 672 ATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred EcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999988 678999999999999999999874 24556677777778877 6789999888887655
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-23 Score=228.06 Aligned_cols=279 Identities=15% Similarity=0.158 Sum_probs=196.1
Q ss_pred CCCEEEEeCccchhH-HHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHH-hhhcCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~ll-p~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
..|+||+|+++.... ...+..+..+.++++..|..|+..+.... +...+.+ .+..+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999765433 33333344568899999986653222110 1111222 2457899988887655443211
Q ss_pred HhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~l 388 (673)
.+ ....++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 01 123578899999999988653210 124678999999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC
Q 005855 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (673)
Q Consensus 389 l~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (673)
.++.|++ .|+++|. ++....+ ++++.+.+ ..+ .|. +.|.++.+++..+|+.||++++||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~l----~~~~~~~~----l~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRILL----EEMREKYN----LQD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHHH----HHHHHHhC----CCC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888764 5887873 2333333 44444322 111 255 4689999999999999999999999
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCc-eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhC
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTH 546 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~-gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~ 546 (673)
.||||++++|||||| .|+|+|..+|..+.+..+ +++++ .|.++++++|.++++++.+. .....++++.+ +++
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~-~~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAE-PDVESIVRKLEEAISILRTG-KHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecC-CCHHHHHHHHHHHHhChhhh-hhHHHHHHHHHHhhC
Confidence 999999999999995 899999999999888433 44454 49999999999999876533 34445555544 678
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 005855 547 TAQEWAETFVSELNDTVV 564 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~~~~ 564 (673)
++..-++++++..+....
T Consensus 353 s~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 353 SWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 988889998888876543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-23 Score=234.75 Aligned_cols=273 Identities=18% Similarity=0.210 Sum_probs=196.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-h---HHHHh-hhcCCEEEEeCHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 305 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-~---~il~~-ll~aDlIgF~t~~~~~~Fl~~ 305 (673)
+.|+||+|+...+.++.++-.+..+.++.+.+|.-+|.........+. + .+.+. ...+|.|...+......+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655554433344678888888755432110011110 0 11111 24688888888766555432
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh----cCCceEEEeecccccCChHHH
Q 005855 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (673)
Q Consensus 306 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~VgRLd~~KGi~~~ 381 (673)
.+. ....++.++|+|||.+.|.+..... .++.++ +++++|+++||+.+.||+..+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~~-------~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRSE-------EMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCccccH-------HHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 110 0134788999999999987542211 122222 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
++|++++ |+ +.|+++|. +++. +++++++.. .+|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~~----~~l~~~~~~----------~~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPYR----EELEKMFAG----------TPTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChHH----HHHHHHhcc----------CCeE-EeccCCHHHHHHHHHHCC
Confidence 9998764 44 56888873 3433 344444432 1355 478999999999999999
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
++|+||..||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++. ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999995 899999999988877 3579999999999999999999985 45777788
Q ss_pred HHhhHHHhhCCHHHHHHHHHHH
Q 005855 537 WHNFTHVTTHTAQEWAETFVSE 558 (673)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~ 558 (673)
+++++++++|++...++++++.
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~ 430 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNE 430 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHH
Confidence 8889999999999999988874
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-23 Score=239.62 Aligned_cols=331 Identities=14% Similarity=0.116 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccC-----------CCchh-hhhcCCc
Q 005855 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTLPS 277 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~P-----------fP~~e-~fr~lp~ 277 (673)
|..-..++...++.+.... ...|+||.|++.-.+++..|+++. +++.++..|.- |...+ .++. ..
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~-~~ 464 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF-SC 464 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh-hh
Confidence 4333444444444443322 246999999877778888887765 57888888842 11111 1110 01
Q ss_pred ch-HHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhcc-ccC-C------CceeeCCeeeEEEEeecCcChhhhhhhhcCCh
Q 005855 278 RS-DLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP 348 (673)
Q Consensus 278 r~-~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~-~~~-~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~ 348 (673)
+- .=...|..||.|.-.|+......-..+..+-.. ..+ + +++.+. ..++.++|+|+|...|.+......
T Consensus 465 r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 465 QFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred chHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 00 012245567776655543322110000000000 000 0 111111 227889999999999875321100
Q ss_pred --------hHHHH---HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC-CCC
Q 005855 349 --------VQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 411 (673)
Q Consensus 349 --------~~~~~---~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~ps-r~~ 411 (673)
+.+.. ...++.+ +++++|++|||+++.||+..+++||.++.+..+ ++.|++||++. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~----~~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRE----LVNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCC----CcEEEEEECCccccc
Confidence 00000 0001111 357799999999999999999999998765544 46688888641 111
Q ss_pred --hHHHHHHHHHHHHHHHhhccccCCCCcccEEEeC---CCCCHHHHHHHHH-HcCEEEEcCCCcCCChhHHHHHhhccC
Q 005855 412 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 485 (673)
Q Consensus 412 --~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vv~Sl~EGf~Lv~lEamA~~~~ 485 (673)
..+..+..+++.+++.+.+- .+ .|.++. +..+.++++.+|+ ++||||+||.+||||+|++||||||
T Consensus 619 s~d~ee~~el~~L~~La~~lgL----~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNL----KG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCC----CC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 11111222445566655432 12 355432 2445578888777 5799999999999999999999995
Q ss_pred CCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHH
Q 005855 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (673)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 559 (673)
.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+++. ..++.+.++.+++++++ ++|++...++++++..
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 678999999999999999987653 34567777788888887 6789999998887755
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-23 Score=223.56 Aligned_cols=232 Identities=16% Similarity=0.184 Sum_probs=173.5
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--cCCc
Q 005855 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (673)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (673)
.+|.+...+....+.+.. .++. ...++.++|+|||.+.|.+..... ....+..+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCe
Confidence 367777777665554432 1121 235688999999998886532111 11111222 3577
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEe
Q 005855 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (673)
Q Consensus 365 iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (673)
+|+++||+++.||+..+++|+..++++.|+...++.|+++|. ++.. +++++++.+.+ ....++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~-------~~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAG-------LAHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcC-------CcceEEE
Confidence 999999999999999999999999999887666788998874 2322 23344443322 1234456
Q ss_pred CCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHH
Q 005855 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (673)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~ 522 (673)
.|. .+++..+|+.||++|+||..||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 664 5789999999999999999999999999999995 899999999999888 56799999999999999999
Q ss_pred HHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHH
Q 005855 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (673)
Q Consensus 523 ~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 561 (673)
++++. ++++..+.+++++++ .++++...++++++..++
T Consensus 334 ~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99985 446777778888887 688998888888776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-23 Score=221.60 Aligned_cols=295 Identities=20% Similarity=0.231 Sum_probs=207.0
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCc------ch-HHHHhhhcCCEEEEeC
Q 005855 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS------RS-DLLRAVLAADLVGFHT 295 (673)
Q Consensus 223 ~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~------r~-~il~~ll~aDlIgF~t 295 (673)
..+.+.....|+|++|++....++..+++. .+.++.+..|.............+ +. .....+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 333333335799999998777666666544 467888888875432110000000 01 1123456799999988
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeeccccc
Q 005855 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 375 (673)
Q Consensus 296 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~ 375 (673)
......+.. ... ....++.++|+|+|.+.|.+..... ...+.+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 766555432 111 1123588999999998886542211 1111111 11467899999999999
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHH
Q 005855 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (673)
Q Consensus 376 KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 455 (673)
||+..+++|+..+.+++|+ +.|+++|.......+ ....++++++.+.+. . ..+. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRER----ANLVIVGGPRDDILA---MDEEELRELARELGV----I--DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcchh---hhhHHHHHHHHhcCC----C--ceEE-EeccCCHHHHHH
Confidence 9999999999999887765 458888864432211 222345555544321 1 1244 578999999999
Q ss_pred HHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 005855 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (673)
Q Consensus 456 ly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 533 (673)
+|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +++.
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHH
Confidence 9999999999999999999999999995 899999999998888 45799999999999999999999864 5777
Q ss_pred HHHHHhhHHH-hhCCHHHHHHHHH
Q 005855 534 KRHWHNFTHV-TTHTAQEWAETFV 556 (673)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl 556 (673)
.+..++++++ ++++++..+++|+
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7788888888 7889998888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-23 Score=223.14 Aligned_cols=286 Identities=21% Similarity=0.201 Sum_probs=204.2
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhh-----cCCcchH-HHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSD-LLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr-----~lp~r~~-il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
..|+||+|++...+.+.+++ +..+.++.+.+|..+|...... ....... ....+..+|.|.+.+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 46999999988776655544 3457888999998655211100 0000111 123356788888888766555432
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~ 381 (673)
. .-+. ...++.++|+|+|++.|.+.. ...++.++ .++++|+++||+.+.||+..+
T Consensus 162 ~---~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 0011 135788999999998886421 11233333 356799999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
++|++++. ++ +.|+++|++. +. .++.+++++.+...+... ..++++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~---~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DT---PEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--Cc---HHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 22 4466666432 11 233455555554443211 23677788999999999999999
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCH------HHHHHHHHHHhcCCHHHHH
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 533 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~------~~lA~aI~~aL~m~~~er~ 533 (673)
++|+||..||||++++|||+|| .|+|+|..+|..+.+ +.+|++++|.|. ++++++|.++++. ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999995 899999999988887 567999999998 9999999999985 45777
Q ss_pred HHHHHhhHHH-hhCCHHHHHHHHHHHHHH
Q 005855 534 KRHWHNFTHV-TTHTAQEWAETFVSELND 561 (673)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 561 (673)
++.+++++.+ ++++++.+++++++.+++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 7777887776 578999999998887764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-23 Score=232.47 Aligned_cols=283 Identities=19% Similarity=0.159 Sum_probs=198.9
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch---hhhhc---CCcchH--------HH-HhhhcC
Q 005855 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LL-RAVLAA 288 (673)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~---e~fr~---lp~r~~--------il-~~ll~a 288 (673)
.+...+.+.|+||+|......++..+-.+..+.|+.+..|.-++.. +++.. .+..+. +. ..+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444455779999998765555555545556789999999765421 22211 000000 11 123467
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEE
Q 005855 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 368 (673)
Q Consensus 289 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~ 368 (673)
|.|...+........ .++....++.++|||||.+.|.+.... ....++++|++
T Consensus 246 d~Ii~~s~~~~~~~~----------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI----------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH----------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 777665543322111 111224578899999999988753210 11246789999
Q ss_pred eecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCC
Q 005855 369 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (673)
Q Consensus 369 VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (673)
+||+.+.||+..+++|++.+.++.|++ .|+++|... .+ + .+.+++++++.+.+.. ..|++ .|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~-~---~~~~e~~~li~~l~l~------~~V~f-~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED-P---EYAEECRELVESLGLE------DNVKF-TG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC-h---HHHHHHHHHHHHhCCC------CeEEE-cC--
Confidence 999999999999999999998888764 588777432 11 2 3456666676665421 13554 55
Q ss_pred CHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccC--------ceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~--------~gllVnP~D~~~lA~a 520 (673)
.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|+.+.+.. +|++|+|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999995 89999999999888733 7999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhHHHhh-CCHHHHHHHHHH
Q 005855 521 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 557 (673)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 557 (673)
|.++++.+ +++.++.+++++++++ ++++..+++|.+
T Consensus 436 i~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999864 5777888888888866 466777776654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-22 Score=222.93 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=187.1
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcC-------------Ccch--HH-----------H--H
Q 005855 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------L--R 283 (673)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~l-------------p~r~--~i-----------l--~ 283 (673)
+|+|..|--+...+ .+.+..+++++++++|.|.-+.+.+..+ ..+. .+ + .
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 48665553233322 3445567889999999665455554322 1111 01 1 1
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCC
Q 005855 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (673)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (673)
.+..||.|...+.....++.+ .. +...++.++|+|||.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 245778887776544444321 11 11236789999999988764311 012356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~-~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
++|+++||+.+.||+..+|+||.++.+..|+. ..++.|+++|...... ..++.+++++++.+.+-. + .|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~----~--~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE----D--KVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC----C--eEE
Confidence 79999999999999999999999999888752 1257799888532111 123455666666554321 1 355
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchh-hc-----cCceEEECCCCHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~ 516 (673)
|.+.++.+++..+|+.||+++.||..||||++++|||||| .|+|+|+.+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5689999999999999999999999999999999999995 7899999888654 34 45799974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHH
Q 005855 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551 (673)
Q Consensus 517 lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 551 (673)
+|++|.++++++++++..+.++.++..++++.+..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 99999999999887766655555555566765543
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-22 Score=221.71 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=197.3
Q ss_pred CEEEEeCccc-hhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-------------------hH----H---HH--
Q 005855 233 DVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-------------------SD----L---LR-- 283 (673)
Q Consensus 233 DvVwvHDyhl-~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-------------------~~----i---l~-- 283 (673)
|.|||-.--. +.+| ++| ....+|++.+|.|.-+.++...+-.+ +. . +.
T Consensus 140 p~v~vDt~~~~~~~p-l~~--~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~ 216 (463)
T PLN02949 140 PLYFFDTSGYAFTYP-LAR--LFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGL 216 (463)
T ss_pred CCEEEeCCCcccHHH-HHH--hcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHH
Confidence 4578743221 2222 233 34689999999887776554433100 00 0 11
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCC
Q 005855 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (673)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (673)
.+..+|.|...+....+++. +.. +...++.++++|+|.+.|..... ....++
T Consensus 217 ~~~~ad~ii~nS~~t~~~l~----~~~------------~~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~ 268 (463)
T PLN02949 217 VGRCAHLAMVNSSWTKSHIE----ALW------------RIPERIKRVYPPCDTSGLQALPL------------ERSEDP 268 (463)
T ss_pred HcCCCCEEEECCHHHHHHHH----HHc------------CCCCCeEEEcCCCCHHHcccCCc------------cccCCC
Confidence 12467777766554333332 111 11236778999999877632110 001356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
++++++||+.+.||+..+|+||.+++++.++-..++.|+++|.... ++..++.+++++++.+.+- .+ .|.
T Consensus 269 ~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~---~~~~~~~~eL~~la~~l~L----~~--~V~- 338 (463)
T PLN02949 269 PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN---KEDEERLQKLKDRAKELGL----DG--DVE- 338 (463)
T ss_pred CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC---cccHHHHHHHHHHHHHcCC----CC--cEE-
Confidence 7899999999999999999999999875543223567998886421 1122334556666655332 11 355
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchh-hc-----cCceEEECCCCHHHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEV 517 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~l 517 (673)
|.+.++.+++.++|+.||+++.||..||||++++|||||| .|+|++..+|..+ ++ |.+|++++ |++++
T Consensus 339 f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~l 412 (463)
T PLN02949 339 FHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEY 412 (463)
T ss_pred EeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHH
Confidence 4689999999999999999999999999999999999994 7999999988753 33 34688874 99999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhH
Q 005855 518 ANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (673)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 563 (673)
|++|.++++++++++.++.+++++.+.+++.+..++++++.++...
T Consensus 413 a~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 413 ADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999998887888888899999999999999999988877654
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=214.90 Aligned_cols=275 Identities=17% Similarity=0.136 Sum_probs=194.2
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCc--hhhhhcCCc--chHHH-HhhhcCCEEEEeCHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLL-RAVLAADLVGFHTYDYA 299 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~--~e~fr~lp~--r~~il-~~ll~aDlIgF~t~~~~ 299 (673)
+.+..+ .|+||+|+....+....+.+ ..+.++.+.+|..... .......++ ...+. ..+..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 49999997654443333333 3457888888853211 111100001 11122 22456899988886555
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChH
Q 005855 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (673)
Q Consensus 300 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~ 379 (673)
+.+.. .+. ...++.++|+|+|.+.|.+... ..+++.|+++||+.+.||+.
T Consensus 155 ~~~~~-----~~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLA-----LGF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHH-----cCC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 44432 121 2347889999999988764311 13467899999999999999
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 005855 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (673)
Q Consensus 380 ~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (673)
.+++|+..+.+++|+ +.|+++|. ++. .+++++++.+.+. . ..|. +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~----~~l~ivG~-----g~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPE----VRLVIIGD-----GPL----LAALEALARALGL----G--GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCC----eEEEEEeC-----chH----HHHHHHHHHHcCC----C--CeEE-ECCCCCHHHHHHHHHh
Confidence 999999999888776 45888873 232 2344555544221 1 1244 5789999999999999
Q ss_pred cCEEEEcCC------CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHH
Q 005855 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (673)
Q Consensus 460 ADv~vv~Sl------~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (673)
||++++||. .||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++.+ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999995 899999999998877 56899999999999999999999854 46
Q ss_pred HHHHHHHhhHHH-hhCCHHHHHHHHH
Q 005855 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (673)
Q Consensus 532 r~~r~~~~~~~v-~~~~~~~W~~~fl 556 (673)
+.++..++++++ +.++++.+++++.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777778888887 5788888888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=212.84 Aligned_cols=282 Identities=20% Similarity=0.258 Sum_probs=196.6
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHH
Q 005855 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (673)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~ 305 (673)
++..+ .|+||+|.+|..++..+++...+..++....|...+...+ +. +-..+.. ..++.+...+....+.|...
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~-~~--~~~~~~~--~~~~~~~~~s~~~~~~~~~~ 148 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL-RM--LAYRLTD--FLSDLTTNVSKEALDYFIAS 148 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH-HH--HHHHHHh--hccCceEEEcHHHHHHHHhc
Confidence 33344 5899999999888888887777777888888864322111 00 0001111 12444544555444444321
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHH
Q 005855 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKL 382 (673)
Q Consensus 306 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L 382 (673)
+ .-...++.++|+|+|...|.+.. .....+++.+ .++++++++||+.+.||+..++
T Consensus 149 -----~----------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li 207 (360)
T cd04951 149 -----K----------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLL 207 (360)
T ss_pred -----c----------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHH
Confidence 0 01134788999999998876432 1122344444 3678999999999999999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCE
Q 005855 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (673)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (673)
+|+.++.+++|++ .|+++|. +++.+. +++.+.+.+.. ..|.+ .|.. +++..+|+.||+
T Consensus 208 ~a~~~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad~ 265 (360)
T cd04951 208 KAFAKLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVKL-LGLR--DDIAAYYNAADL 265 (360)
T ss_pred HHHHHHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhce
Confidence 9999998888764 5887873 232233 33343333211 12554 5543 678999999999
Q ss_pred EEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 463 ~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
+++||..||||++++|||||| .|+|+|+.+|..+.+..+|++++|.|++++|++|.++++++++.+..+..+....
T Consensus 266 ~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 341 (360)
T cd04951 266 FVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERI 341 (360)
T ss_pred EEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999995 8999999999888886689999999999999999999987776666665553334
Q ss_pred HhhCCHHHHHHHHHHHHH
Q 005855 543 VTTHTAQEWAETFVSELN 560 (673)
Q Consensus 543 v~~~~~~~W~~~fl~~L~ 560 (673)
.+.++++.+++.+++..+
T Consensus 342 ~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 342 VKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHhcCHHHHHHHHHHHhh
Confidence 578899999998876543
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-22 Score=221.31 Aligned_cols=290 Identities=11% Similarity=0.022 Sum_probs=188.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+||+|++...++..+.........|....|. +++...-+.+-+.. ..+..++++.-.+. ++.+.....+.+.
T Consensus 280 rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s~~v~~~l~ 354 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNNHCVTRHYA 354 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhccHHHHHHHH
Confidence 3499999999987776665554443343555665 33211111000000 12333444433332 2222221111111
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
.. ++-...++.+||||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||...+|+|+.+++
T Consensus 355 ~~--------lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll 424 (578)
T PRK15490 355 DW--------LKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL 424 (578)
T ss_pred HH--------hCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH
Confidence 00 111356899999999999887643111 01111222223 34578899999999999999999999999
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (673)
+++|++ .|+++|. +++ ++++++++.+.+. . ..|+| .|. .+++..+|+.|||||+||.+
T Consensus 425 k~~pdi----rLvIVGd-----G~~----~eeLk~la~elgL----~--d~V~F-lG~--~~Dv~~~LaaADVfVlPS~~ 482 (578)
T PRK15490 425 QHHPAT----RFVLVGD-----GDL----RAEAQKRAEQLGI----L--ERILF-VGA--SRDVGYWLQKMNVFILFSRY 482 (578)
T ss_pred hHCCCe----EEEEEeC-----chh----HHHHHHHHHHcCC----C--CcEEE-CCC--hhhHHHHHHhCCEEEEcccc
Confidence 888864 5888873 333 3345555544331 1 13554 565 46899999999999999999
Q ss_pred cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHhhHHH-h
Q 005855 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHV-T 544 (673)
Q Consensus 470 EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v-~ 544 (673)
||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.+++++++ +
T Consensus 483 EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e 558 (578)
T PRK15490 483 EGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQE 558 (578)
T ss_pred cCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999995 899999999999887 78999999999999998884433221 123445567778887 5
Q ss_pred hCCHHHHHHHHHHHHHH
Q 005855 545 THTAQEWAETFVSELND 561 (673)
Q Consensus 545 ~~~~~~W~~~fl~~L~~ 561 (673)
+|+++.-++.|++.++.
T Consensus 559 ~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 559 RFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hCCHHHHHHHHHHHHHh
Confidence 68999988888877664
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-22 Score=215.15 Aligned_cols=283 Identities=17% Similarity=0.146 Sum_probs=190.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHH---------HhhhcCCEEEEeCHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL---------RAVLAADLVGFHTYDYAR 300 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il---------~~ll~aDlIgF~t~~~~~ 300 (673)
...|+|++|+..... + +++... ..++.+.+|.| .........+.+.+. ..+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999999866432 2 233333 38899999954 221111001111111 124457888777654443
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHH
Q 005855 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 301 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~ 380 (673)
.+.. .++.. ....+.++|+|||.+.|.+..... ........+++++|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3321 11100 112335889999999886542211 0011112256789999999999999999
Q ss_pred HHHHHHHHHHhC---cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHh-hccccCCCCcccEEEeCCCCCHHHHHHH
Q 005855 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (673)
Q Consensus 381 ~L~Af~~ll~~~---P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (673)
+++|++++.++. |+ +.|+++|.+... ..+..++.+++++++.+ .+- . ..|+ |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l----~--~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLL----E--DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCC----C--ceEE-EeCCCChHHHHHH
Confidence 999999998876 54 568888854321 12222344556666554 221 1 1355 5789999999999
Q ss_pred HHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 005855 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (673)
Q Consensus 457 y~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 534 (673)
|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|+++++ |++++|++|.++++.+. ++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHH
Confidence 999999999999999999999999995 899999999988888 457999987 99999999999998764 6777
Q ss_pred HHHHhhHHH-hhCCHHHHHHH
Q 005855 535 RHWHNFTHV-TTHTAQEWAET 554 (673)
Q Consensus 535 r~~~~~~~v-~~~~~~~W~~~ 554 (673)
+.+++++++ .+++++..+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 778888877 55777776654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-21 Score=208.91 Aligned_cols=277 Identities=16% Similarity=0.169 Sum_probs=193.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhC---CCCeEEeEeccCCCchhhhhcCCc-chHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~---~~~~Ig~flH~PfP~~e~fr~lp~-r~~il~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (673)
..|+|++|++....++.++..+. .+.++.+.+|..-.. ....-+. +.-+...+..+|.|...+......+..
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-- 159 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYE-- 159 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHH--
Confidence 45999999876555555544332 257888888853111 1011111 122334466899999998876655542
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHH
Q 005855 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (673)
Q Consensus 307 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~ 383 (673)
.. +...++.++|+|+|...|.+... . ..++++ .++++++++||+.+.||+..+++
T Consensus 160 --~~------------~~~~~i~vi~n~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 160 --LF------------DITKEIEVIPNFVDEDRFRPKPD-----E---ALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred --hc------------CCcCCEEEecCCcCHhhcCCCch-----H---HHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 11 11236889999999887754211 1 122233 36789999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEE
Q 005855 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (673)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (673)
|++.+.++ ++ +.|+++|.+ ++...+ ++++.+.+. . ..|++ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~----~~~~~~~~~----~--~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPA----ERLARELGL----Q--DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHH----HHHHHHcCC----C--ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 22 457777743 222233 333333221 1 13554 4543 5799999999999
Q ss_pred EEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhH
Q 005855 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (673)
Q Consensus 464 vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (673)
|+||..||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.++++++ +++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999995 899999999998888 56899999999999999999999854 467777777888
Q ss_pred H-HhhCCHHHHHHHHHHHHHH
Q 005855 542 H-VTTHTAQEWAETFVSELND 561 (673)
Q Consensus 542 ~-v~~~~~~~W~~~fl~~L~~ 561 (673)
. ...+++...++.+++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5678999888888776653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=219.59 Aligned_cols=275 Identities=16% Similarity=0.096 Sum_probs=189.5
Q ss_pred cCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCC-chhhhhcCC-c---chHHHHhhhcCCEEEEeCHHHHHHHH
Q 005855 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-SSEIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP-~~e~fr~lp-~---r~~il~~ll~aDlIgF~t~~~~~~Fl 303 (673)
..++|+|+++-.+... +.++ +..+.+++..++|.-.- ....-...+ | -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567999887655443 3333 55678999999996421 100000000 1 12234445567888877765444332
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHH
Q 005855 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (673)
Q Consensus 304 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~ 383 (673)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11224578899999876544321 0123467999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEE
Q 005855 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (673)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (673)
|+.++.++.|++ .|+++|. +++. +++++++.+.+. .+ .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l----~~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQA----QD--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCC----CC--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999988864 5888873 3333 345555544321 11 244 46654 578899999999
Q ss_pred EEcCCCcCCChhHHHHHhhccCCCceEEEeCCC-Cchhhc--cCceEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 005855 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (673)
Q Consensus 464 vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP----~D----~~~lA~aI~~aL~m~~~er 532 (673)
|+||.+||||++++|||||| .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999995 899999986 677777 789999984 33 8999999999994 3467
Q ss_pred HHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 533 EKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
.++.+++++.++++++..-++++.+.+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77888889999999988888888766653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=227.88 Aligned_cols=279 Identities=14% Similarity=0.081 Sum_probs=182.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEe-EeccCCCc---hhhhhcCCcchHHHHhhhcCCEEEEe--CHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVS 304 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~-flH~PfP~---~e~fr~lp~r~~il~~ll~aDlIgF~--t~~~~~~Fl~ 304 (673)
..|+||+|++.-..+..+..... ++++.+ .+|+ +|. .+.++. ....+...+..++.+.+. +....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 35999999998877766665543 455443 4564 221 121110 001122223333333222 2222222221
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEeecccccCChHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 383 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~~L~ 383 (673)
.++ ....++.++|||||++.|.+. +........++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 112 124578999999999888642 111111112222222 4668999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEE
Q 005855 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (673)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (673)
|+.++++++|++ .|+++|. ++. ++++++++.+.+- ...++|.|.. +++..+|+.|||+
T Consensus 538 A~a~l~~~~p~~----~LvIvG~-----G~~----~~~L~~l~~~lgL-------~~~V~flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKV----RFIMVGG-----GPL----LESVREFAQRLGM-------GERILFTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCe----EEEEEcc-----Ccc----hHHHHHHHHHcCC-------CCcEEEcCCc--chHHHHHHhcCEE
Confidence 999999988865 4888874 232 2345555554332 1233456765 4789999999999
Q ss_pred EEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHh
Q 005855 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 539 (673)
Q Consensus 464 vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~--~~lA~aI~~aL~m~~~er~~r~~~~ 539 (673)
|+||.+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999995 899999999999888 568999998875 689999999887543 223444567
Q ss_pred hHHH-hhCCHHHHHHHHHHH
Q 005855 540 FTHV-TTHTAQEWAETFVSE 558 (673)
Q Consensus 540 ~~~v-~~~~~~~W~~~fl~~ 558 (673)
++++ ++|++..-++++++.
T Consensus 671 r~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 7776 478888777777654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=214.29 Aligned_cols=285 Identities=14% Similarity=0.110 Sum_probs=197.6
Q ss_pred CCCCEEEEeCccchhH--HHHHHhhCCCCeEEeEeccCCCchhhhhc-C--Ccch----HHH-HhhhcCCEEEEeCHHHH
Q 005855 230 KDGDVVWCHDYHLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRT-L--PSRS----DLL-RAVLAADLVGFHTYDYA 299 (673)
Q Consensus 230 ~~~DvVwvHDyhl~ll--p~~Lr~~~~~~~Ig~flH~PfP~~e~fr~-l--p~r~----~il-~~ll~aDlIgF~t~~~~ 299 (673)
.+.|+||+|...++.. ...+++ ..+.++.+..|--+|..-.-.. . +... .+. ..+..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 3569999998665432 223333 3446777767755543211000 0 0000 111 12446899988887666
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccC
Q 005855 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (673)
Q Consensus 300 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~K 376 (673)
+.+.. .+ ....++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 55432 12 12457889999999998875321 1 112344444 3568999999999999
Q ss_pred ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHH
Q 005855 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (673)
Q Consensus 377 Gi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (673)
|+..+++|++++ +++|+ +.|+++|. ++.. +++++++.+.+. ..|+ |.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~-f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVH-FLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceE-EeCCCCHHHHHHH
Confidence 999999999876 44454 56888873 3333 334444443321 2365 4688999999999
Q ss_pred HHHcCEEEEcCCCcCCC----hhHHHHHhhccCCCceEEEeCCCCc--hhhccCceEEECCCCHHHHHHHHHHHhcCCHH
Q 005855 457 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (673)
Q Consensus 457 y~~ADv~vv~Sl~EGf~----Lv~lEamA~~~~~~g~lVlSe~aG~--~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~ 530 (673)
|+.||++++||..|+++ ...+|||||| .|+|+|..+|. .+.+..+|++|+|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4579999995 89999988774 355556899999999999999999999865 5
Q ss_pred HHHHHHHHhhHHHh-hCCHHHHHHHHHHHHHHhH
Q 005855 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (673)
Q Consensus 531 er~~r~~~~~~~v~-~~~~~~W~~~fl~~L~~~~ 563 (673)
++..+.+++++++. ++++...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77788888898885 6899999999998888654
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-21 Score=207.92 Aligned_cols=266 Identities=20% Similarity=0.214 Sum_probs=191.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|..+...+..++.+ ..+.++.+.+|-.++....+ . ..+..+|.+.+.+......+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------N---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------H---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 459999998776555444443 34688999999766533211 1 224468988887765544432 222
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~~ 387 (673)
+. ...++.++|+|||.+.|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 21 135788999999998886543221 1222244443 367789999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcC
Q 005855 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (673)
Q Consensus 388 ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (673)
+.++.++ +.|+++|... ....+.+.+.+.+.+.+. . ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~----~--~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGL----Q--DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCC----c--ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9877554 5588888533 112334444444443221 1 12554 555 678999999999999999
Q ss_pred -CCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 468 -l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|..++...++++.++.+++++.++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999995 899999999988877 357999999999999999998888788899998999998886
Q ss_pred hC
Q 005855 545 TH 546 (673)
Q Consensus 545 ~~ 546 (673)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 54
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=209.88 Aligned_cols=252 Identities=18% Similarity=0.071 Sum_probs=173.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHH-HHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
+.|+|++|..+...++.++........+.+..|..+...+.+........+ ...+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 569999999887777777666655556677778765443322211100001 112345677766665444433210
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~ 386 (673)
....++.++|+|||.+.|..... ..+. ++.+ .++++|+++||+.+.||+..+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11357889999999988765321 1111 1222 46789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEc
Q 005855 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (673)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (673)
.+.+++|++ .|+++|. ++..+.+++ .+.+.+ .. ..|++ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~~----~~~~~~----~~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIKK----KVKELG----LE--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHHH----HHHhcC----CC--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 999888764 5888873 233333333 333322 11 13554 555 67899999999999999
Q ss_pred CCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccC-ceEEECCCCHHHHHHHHHHHhcCCHHHH
Q 005855 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEER 532 (673)
Q Consensus 467 Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~-~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (673)
|..||||++++|||||| .|+|+|+.+|..+.++. ++++..+.+++++|++|.++++++...+
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhh
Confidence 99999999999999995 99999999999988843 4556666678999999999999886443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=207.46 Aligned_cols=276 Identities=20% Similarity=0.203 Sum_probs=200.6
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch--hhhhc---CCcchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~--e~fr~---lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
...|+||+|++..... +..+.++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+...+..+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4569999998877765 456788999999654421 11110 011233445567899999888766555543
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
..+. ...++.++|+|+|...+..... .. ........++++|+++||+.+.||+..+++|
T Consensus 158 ----~~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 ----YLGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred ----HhCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1111 2347889999999887754311 11 1111223578899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
+..+.+.+|+ +.|+++|.... .+......++ +. + ....+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~~----~~----~---~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARLR----EL----G---LGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHHH----Hc----C---CCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999888764 45777774321 1112222221 11 1 113344679999999999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
+||..||||++++|||+|| .|+|+|+.+|..+.++.+|+++++.|.++++++|.++++. ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999995 8999999988888778899999999999999999999875 4577777788888899
Q ss_pred hCCHHHHHHHHH
Q 005855 545 THTAQEWAETFV 556 (673)
Q Consensus 545 ~~~~~~W~~~fl 556 (673)
+++++.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-20 Score=208.46 Aligned_cols=272 Identities=14% Similarity=0.098 Sum_probs=192.3
Q ss_pred CCCEEEEeCccch-hHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHH-hhhcCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~-llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
+.|+++.|-++.. ....+++++....++....|......+.+ .+....+.+ .+..+|.|.+.+......+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 4577777654443 33345666666566888888532111111 011111222 245789999988766554422
Q ss_pred HhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~l 388 (673)
.++ ....++.++|+|+|...+.+.. ...++..|+++||+.+.||+..+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1235778999999987664320 013567899999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH--cCEEEEc
Q 005855 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 466 (673)
Q Consensus 389 l~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~--ADv~vv~ 466 (673)
.+.+|+. ++.++++|. +++... +++++.+.+ .. ..|+ +.|.++.+++.++|+. ||+++.|
T Consensus 256 ~~~~p~~--~l~~~iiG~-----g~~~~~----l~~~~~~~~----~~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSI--KIKWTHIGG-----GPLEDT----LKELAESKP----EN--ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCc--eEEEEEEeC-----chHHHH----HHHHHHhcC----CC--ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 9988875 467777763 333333 344433211 10 1244 5799999999999986 7899999
Q ss_pred CCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCC-CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW-NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 467 Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~-D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
|..|||+++++|||||| .|+|+|..+|..+.+ |.+|++++|. |++++|++|.++++. ++++.++.+++++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999995 899999999999988 4478999874 899999999999985 457888888888888
Q ss_pred -hhCCHHHHHHHHH
Q 005855 544 -TTHTAQEWAETFV 556 (673)
Q Consensus 544 -~~~~~~~W~~~fl 556 (673)
+++++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 5788888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-21 Score=201.82 Aligned_cols=278 Identities=17% Similarity=0.189 Sum_probs=187.0
Q ss_pred cCCCCEEEEeCccc-hhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchH------HHHhhhcCCEEEEeCHHHHHH
Q 005855 229 YKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSD------LLRAVLAADLVGFHTYDYARH 301 (673)
Q Consensus 229 ~~~~DvVwvHDyhl-~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~------il~~ll~aDlIgF~t~~~~~~ 301 (673)
....|+|++|+... ...+.....+..+.++.+..|..++....... +.... ....+..+|.+.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 34679999998432 22222222223467888888876654321000 01110 012234567777666433322
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCCh
Q 005855 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (673)
Q Consensus 302 Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi 378 (673)
... .+...++.++|+|+|.+.|.+.... . . ++.+ .++++|+++||+++.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~---~-~----~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPSR---G-R----RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchhh---h-h----hhhccCCCCCcEEEEEeCcchhcCH
Confidence 210 1123578899999999888643210 0 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (673)
..+++|+.++.+++|++ .|+++|... ..+. ..++.++.+.+ .. ..|+ +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALG----LE--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHHh
Confidence 99999999999887764 588777422 1221 22223322222 11 1244 579999999999999
Q ss_pred HcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhcc-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 459 ~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
.||++++||..||||++++|||+|| .|+|+|+.+|..+.+. ..|++++ .|.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999995 8999999999888883 3455554 56699999999999987 57778888
Q ss_pred HhhHH-HhhCCHHHHHHHHH
Q 005855 538 HNFTH-VTTHTAQEWAETFV 556 (673)
Q Consensus 538 ~~~~~-v~~~~~~~W~~~fl 556 (673)
++++. .++++++.-+++++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88888 57788887777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-21 Score=201.86 Aligned_cols=280 Identities=20% Similarity=0.159 Sum_probs=193.0
Q ss_pred CCCEEEEeCccch----hHHHHHH-hhCCCCeEEeEeccCCCchhhhhcCCcchHH-HHhhhcCCEEEEeCHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLM----FLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 231 ~~DvVwvHDyhl~----llp~~Lr-~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
..|+|++|+++-. ......+ ....+.++.+.+|...+.... .....+ ...+..+|.|.+.+.+..+.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 4599999873321 1111111 123678999999986222111 111112 22345799999987444444432
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
. ....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 00347889999999877653211 1 11 1112467899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
++.+.+++|+ +.|+++|.... +.........+++.+.+ .. ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~~~~i~~~~----~~--~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPD----VRLLVAGETHP----DLERYRGEAYALAERLG----LA--DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCC----eEEEEeccCcc----chhhhhhhhHhHHHhcC----CC--CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 9999888775 45887874321 11111111002222222 11 13665555599999999999999999
Q ss_pred EcCCCc--CCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 005855 465 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (673)
Q Consensus 465 v~Sl~E--Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (673)
+||..| |++++++|||||| .|+|+|+.+| .+++ +.+|+++++.|++++|++|.++++.+ +++.++.++++
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 8999999888 6666 56899999999999999999999865 46677788889
Q ss_pred HHHhhCCHHHHHHHHHHHH
Q 005855 541 THVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~L 559 (673)
+++++++++.+++++.+.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887754
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=207.58 Aligned_cols=268 Identities=19% Similarity=0.142 Sum_probs=186.6
Q ss_pred cCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCC-CchhhhhcCCc---chHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~Pf-P~~e~fr~lp~---r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
.++.|+|++|..+.... .+.......+...++|... .....-...++ .+.++..+..+|.|.+.+....+.+..
T Consensus 97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 36779999988776655 2223334455666677532 11110001111 234555567889999888766555532
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
.++ ...++.++|+|+|...+.+.. .....+..|+++||+.+.||+..+|+|
T Consensus 175 ----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li~a 225 (372)
T cd04949 175 ----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLIKA 225 (372)
T ss_pred ----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHHHH
Confidence 111 112378999999988765421 011356789999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
+.++.+++|++ .|+++|.+. +...+. +++.+.+. .+ .|. +.|. .+++..+|+.||++|
T Consensus 226 ~~~l~~~~~~~----~l~i~G~g~-----~~~~~~----~~~~~~~~----~~--~v~-~~g~--~~~~~~~~~~ad~~v 283 (372)
T cd04949 226 FAKVVKQVPDA----TLDIYGYGD-----EEEKLK----ELIEELGL----ED--YVF-LKGY--TRDLDEVYQKAQLSL 283 (372)
T ss_pred HHHHHHhCCCc----EEEEEEeCc-----hHHHHH----HHHHHcCC----cc--eEE-EcCC--CCCHHHHHhhhhEEE
Confidence 99999998875 477777432 222333 33322221 11 244 4563 467999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCC-Cchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhH
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (673)
+||..||||++++|||+|| .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|..+++.+ +.+.++.+++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~ 358 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYE 358 (372)
T ss_pred ecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999995 899999877 677777 67899999999999999999999876 467777788888
Q ss_pred HHhhCCHHHHHHH
Q 005855 542 HVTTHTAQEWAET 554 (673)
Q Consensus 542 ~v~~~~~~~W~~~ 554 (673)
...++++..++++
T Consensus 359 ~~~~~s~~~~~~~ 371 (372)
T cd04949 359 NAERYSEENVWEK 371 (372)
T ss_pred HHHHhhHHHHHhc
Confidence 8888877776653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=200.70 Aligned_cols=266 Identities=19% Similarity=0.164 Sum_probs=192.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|..+...+..++..+....+..+.+|.+..... +........+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4599999987666656666665557888888885421111 01123334456799999988776655432 11
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 1245788999999998876431 0112456789999999999999999999999877
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC-
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~- 469 (673)
..|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++.++|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 6554 568878742 222 233334433321 1234468999999999999999999999999
Q ss_pred -----cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 470 -----EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|++++|++|.++++++. ++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Confidence 99999999999995 899999988887777 347999999999999999999998764 567777777877
Q ss_pred Hh-hCCHHHHHH
Q 005855 543 VT-THTAQEWAE 553 (673)
Q Consensus 543 v~-~~~~~~W~~ 553 (673)
+. .|++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 74 566665544
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-20 Score=208.63 Aligned_cols=306 Identities=13% Similarity=0.106 Sum_probs=189.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-hHH-----------------------HH--
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDL-----------------------LR-- 283 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-~~i-----------------------l~-- 283 (673)
.+.|++|.|||+......+||+..++++.+|+.|-. ++-|.+-.. ..+ ++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEeccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 467999999999999999999888999999999943 333421110 000 01
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCC----hhHHHHHH----
Q 005855 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 355 (673)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~---- 355 (673)
....||.+.-.+...++ -|.. +.+++..+ |+|||||++.|.+..... ..++++..
T Consensus 223 aa~~Ad~fttVS~it~~----E~~~------------Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITAY----EAEH------------LLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHHH----HHHH------------HhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 12233333322221111 1122 23333333 999999999987643110 01111111
Q ss_pred -HHHHh---cCCceEEE-eecccc-cCChHHHHHHHHHHHHhCcCcc-CceEEEEEEcCCCCCh---------HHHHHHH
Q 005855 356 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLT 419 (673)
Q Consensus 356 -lr~~~---~~~~iIl~-VgRLd~-~KGi~~~L~Af~~ll~~~P~~~-~~v~Lvqvg~psr~~~---------~ey~~l~ 419 (673)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..-..-. +..++..+..|+.+.. .-.++|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 33433 36788888 799999 9999999999999864211111 1222323334554331 2234566
Q ss_pred HHHHHHHHhhccc---------c-----------------------------------------------------C-CC
Q 005855 420 SQVHEIVGRINGR---------F-----------------------------------------------------G-TL 436 (673)
Q Consensus 420 ~~l~~lv~~IN~~---------~-----------------------------------------------------g-~~ 436 (673)
+.++++..+|+.+ . - ..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 6666665555544 0 0 01
Q ss_pred CcccEEEeCCCCC------HHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch----hhcc---
Q 005855 437 TAVPIHHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 503 (673)
Q Consensus 437 ~~~pV~~~~~~v~------~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~----~~lg--- 503 (673)
+...|+|.+..++ ..+...+|+.||++|+||++||||++++|||||+ .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 1233454443333 2357889999999999999999999999999995 999999999984 4443
Q ss_pred CceEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHH
Q 005855 504 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (673)
Q Consensus 504 ~~gllVn-------P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 560 (673)
..|++|. +.+++++|++|.+.++++..++........+....+++.+-+..|+++-.
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3588887 56788999999999977543333322233366677888887777766544
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=208.65 Aligned_cols=188 Identities=15% Similarity=0.071 Sum_probs=131.6
Q ss_pred eEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeec-c-cccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 005855 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (673)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgR-L-d~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq 403 (673)
.++.++|||||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4788999999975432211100 001 1246789999999 4 4789999999999875 22 467888
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|.+. ++. . ..+.++....+.+++..+|+.||+||+||.+||||+|++|||||+
T Consensus 277 vG~g~----~~~---~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKFS----PFT---A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCCC----ccc---c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 87421 100 0 124443322367899999999999999999999999999999995
Q ss_pred cCCCceEEEeCCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHH
Q 005855 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (673)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~ 560 (673)
.|+|+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... +......++++.+ ..|+.+.-++++++..+
T Consensus 331 ----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 331 ----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred ----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999998887 45899999999999998653322100 0000123455554 56899988888877654
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-20 Score=196.17 Aligned_cols=278 Identities=20% Similarity=0.186 Sum_probs=192.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCC-cchHHHHh-hhcCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp-~r~~il~~-ll~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
..|+|++|+++...+...........++.+..|.-.+... .... ....+..- ...+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999987777776665567888888887654421 0001 11111111 23466665555443333321
Q ss_pred HhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af 385 (673)
. +. ...++.++|+|+|...|.+.... ....++++ .++++|+++||+++.||+..+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 0 11 13467889999999887653221 11222333 3567899999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEE
Q 005855 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (673)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (673)
..+.+++|+ +.|+++|.+. +...++.... ... +..+ .+.+ .+. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~~~~~~---~~~----~~~~--~v~~-~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANLELLAL---KEL----GLED--KVIL-LGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHHHHHHH---Hhc----CCCc--eEEE-ccc--cccHHHHHHhCCEEEe
Confidence 999888765 4588777432 1112222111 111 1111 2443 453 4679999999999999
Q ss_pred cCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh-
Q 005855 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT- 544 (673)
Q Consensus 466 ~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~- 544 (673)
||..||+|++++|||+|+ .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++.
T Consensus 275 ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 999999999999999995 89999999999888855799999999999999999999976 467777788888875
Q ss_pred hCCHHHHHHHHHHH
Q 005855 545 THTAQEWAETFVSE 558 (673)
Q Consensus 545 ~~~~~~W~~~fl~~ 558 (673)
.+++...+++|++.
T Consensus 350 ~~s~~~~~~~~~~~ 363 (365)
T cd03807 350 NFSIEAMVEAYEEL 363 (365)
T ss_pred hCCHHHHHHHHHHH
Confidence 57888888887764
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=203.46 Aligned_cols=269 Identities=14% Similarity=0.116 Sum_probs=179.4
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhC-CCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYN-SDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~-~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl 303 (673)
+.+..+ .|+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+...+..-...+.
T Consensus 79 ~l~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~ 149 (359)
T PRK09922 79 WLKETQ-PDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMM 149 (359)
T ss_pred HHHhcC-CCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHH
Confidence 333334 5999999987776666666543 23455566676543321111 1223578888887765444432
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeeccc--ccCChHHH
Q 005855 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQK 381 (673)
Q Consensus 304 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd--~~KGi~~~ 381 (673)
. .+. ...++.++|+|||.+.+.... ++ ..+++.|+++||+. +.||+..+
T Consensus 150 ~-----~~~-----------~~~ki~vi~N~id~~~~~~~~--~~-----------~~~~~~i~~~Grl~~~~~k~~~~l 200 (359)
T PRK09922 150 A-----RGI-----------SAQRISVIYNPVEIKTIIIPP--PE-----------RDKPAVFLYVGRLKFEGQKNVKEL 200 (359)
T ss_pred H-----cCC-----------CHHHEEEEcCCCCHHHccCCC--cc-----------cCCCcEEEEEEEEecccCcCHHHH
Confidence 1 121 134688999999976653211 10 13467899999996 46999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCC--CHHHHHHHHHH
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAV 459 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v--~~~el~aly~~ 459 (673)
++|+.++. + ++.|+++|. +++.+. +++++.+.|.. ..|+ |.|.+ +.+++..+|+.
T Consensus 201 ~~a~~~~~---~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 201 FDGLSQTT---G----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred HHHHHhhC---C----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhc
Confidence 99998762 2 467888874 333333 44444443311 1355 46665 45899999999
Q ss_pred cCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC-CCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 460 ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe-~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
||++|+||..||||++++|||||| .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+. .| ..
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~-~~--~~ 330 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV-KY--QH 330 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc-cC--CH
Confidence 999999999999999999999995 8999999 88888777 578999999999999999999998774 21 11
Q ss_pred HHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 537 WHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
....+.+.++..+...+++...+..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 331 DAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2223345555555555555555443
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-20 Score=196.20 Aligned_cols=273 Identities=20% Similarity=0.181 Sum_probs=190.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc----------hHHHHhhhcCCEEEEeCHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----------SDLLRAVLAADLVGFHTYDYAR 300 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r----------~~il~~ll~aDlIgF~t~~~~~ 300 (673)
..|+|++|+............+..+.++.+.+|.+++.. ....+.. ......+..+|.+.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 459999998755443333333345788999999887632 1111111 0111234578888887775443
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCC
Q 005855 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (673)
Q Consensus 301 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KG 377 (673)
.+.. . +...++.++|+|+|...|.+.... .. ++.+ .+++.|+++||+.+.||
T Consensus 162 ~~~~-----~------------~~~~~~~vi~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----Y------------GVKRPIEVIPTGIDLDRFEPVDGD----DE----RRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----c------------CCCCceEEcCCccchhccCccchh----HH----HHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1 112358899999999887653210 11 2222 35778999999999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHH
Q 005855 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (673)
Q Consensus 378 i~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (673)
+..+++|++++.++.++ +.|+++|.+ +.. ..+++++.+.+. . ..|. +.+.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGDG-----PER----EELEELARELGL----A--DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeCC-----chH----HHHHHHHHHcCC----C--CcEE-EeccCChHHHHHHH
Confidence 99999999999877654 568878742 222 234444433221 1 1244 57899999999999
Q ss_pred HHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 005855 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (673)
Q Consensus 458 ~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 535 (673)
+.||++++||..||+|++++|||+|| .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .+.++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999995 899999999888887 468999999888 99999999999875 45667
Q ss_pred HHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 536 HWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
.+++++.+.+++ |++.+.+.+
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~~ 371 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKLY 371 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHHH
Confidence 777888887765 555544443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-20 Score=192.58 Aligned_cols=282 Identities=22% Similarity=0.170 Sum_probs=201.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhh----cCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr----~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (673)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+......+.+
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-- 161 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE-- 161 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh--
Confidence 46999999999887765 4445678899999999876432110 0011122233456788888888766555432
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHH
Q 005855 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386 (673)
Q Consensus 307 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~ 386 (673)
.. .....++.++|+|+|...+.+.. ...........+++.|+++||+++.||+..+++|+.
T Consensus 162 --~~-----------~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 162 --LG-----------GVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred --cC-----------CCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 10 01125788999999998775421 000000111245688999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEc
Q 005855 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (673)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (673)
.+.+++|+ +.|+++|. ++....++ +++.+.+. . ..|. +.+.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPD----VRLVIVGD-----GPLREELE----ALAAELGL----G--DRVT-FLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCC----eEEEEEeC-----cHHHHHHH----HHHHHhCC----C--cceE-EEeccChhhHHHHHHhcCEEEec
Confidence 99887764 56887772 23333333 33322221 1 1344 57899999999999999999999
Q ss_pred CCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh-HHH
Q 005855 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THV 543 (673)
Q Consensus 467 Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~v 543 (673)
+..||+|++++|||+|| .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++.+. .+.++.++++ ...
T Consensus 283 ~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE-LRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH-HHHHHHHHHHHHHH
Confidence 99999999999999995 899999999988888 468999999999999999999998754 5566666666 455
Q ss_pred hhCCHHHHHHHHHHHH
Q 005855 544 TTHTAQEWAETFVSEL 559 (673)
Q Consensus 544 ~~~~~~~W~~~fl~~L 559 (673)
+.++++.+++.+++.+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 358 ERFSWDRVAARTEEVY 373 (374)
T ss_pred HhcCHHHHHHHHHHhh
Confidence 7889999998887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-20 Score=194.50 Aligned_cols=279 Identities=18% Similarity=0.164 Sum_probs=197.3
Q ss_pred cCCCCEEEEeC-ccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCc--------chHH-HHhhhcCCEEEEeCHHH
Q 005855 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--------RSDL-LRAVLAADLVGFHTYDY 298 (673)
Q Consensus 229 ~~~~DvVwvHD-yhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~--------r~~i-l~~ll~aDlIgF~t~~~ 298 (673)
....|+|++|. ..+..++........+.++.+.+|..+|.......... ...+ ...+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34569999997 44444554444445578999999988774432111111 1111 12356789999999877
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCCh
Q 005855 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 378 (673)
...+.. .+ ....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 766541 11 1235788999999998776532111 01111 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (673)
..+++|+.++.+. |+ +.|+++|. ++....+++ ++... ....|.+ .+.++.+++.++|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~~----~~~~~-------~~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELKE----LAKAL-------GLDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHHH----HHHHc-------CCCcEEE-eCCCChHHHHHHHH
Confidence 9999999998765 44 55777763 222223332 22111 1124665 46999999999999
Q ss_pred HcCEEEEcCCCcCC-----ChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHH
Q 005855 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (673)
Q Consensus 459 ~ADv~vv~Sl~EGf-----~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (673)
.||++++||..|++ +++++|||+|| .|+|+|..+|..+.+ +.+|+++++.|+++++++|.++++.+ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66789999995 899999999999888 35799999999999999999999654 57
Q ss_pred HHHHHHHhhHHHh-hCCHHHHHHHH
Q 005855 532 REKRHWHNFTHVT-THTAQEWAETF 555 (673)
Q Consensus 532 r~~r~~~~~~~v~-~~~~~~W~~~f 555 (673)
+..+.+++++++. +|+++.++++|
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 7777888888887 78988888876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-20 Score=193.51 Aligned_cols=282 Identities=23% Similarity=0.218 Sum_probs=197.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
...|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 356999999655444433333344457888888877653321111 1222333446689999999877666554311
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
....++.++|+|+|.+.+.+.... ....+ ....+++.|+++||+++.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADRA-----EARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcchH-----HHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 113478899999999887653210 00111 11246788999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (673)
+++|+ +.|+++|.+ ++...++ +++...+ ..+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~~-----~~~~~~~----~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGDG-----PLREALE----ALAAELG-------LEDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcCC-----cchHHHH----HHHHhcC-------CcceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 77664 557777632 2222333 3332222 12234457899999999999999999999999
Q ss_pred cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh-HHHhhC
Q 005855 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (673)
Q Consensus 470 EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~v~~~ 546 (673)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+++ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999995 899999999988877 4567999999999999999999998753 3444444 445677
Q ss_pred CHHHHHHHHHHHHHH
Q 005855 547 TAQEWAETFVSELND 561 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~ 561 (673)
+++.+++.+.+.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 888888888777654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-20 Score=193.53 Aligned_cols=262 Identities=17% Similarity=0.105 Sum_probs=183.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.+.+.+......+ .
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------~ 151 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------Y 151 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh-------h
Confidence 5699999998732222222222 1477888887654322111 011112334567898888886554111 0
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
.....++.++|+|+|...+... ...+++.++++||+.+.||+..+++|++.+.+
T Consensus 152 -----------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 152 -----------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred -----------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 1113478899999998766432 12467899999999999999999999999988
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCc
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (673)
.+|++ .|+++|.. ++... +++++.+.+. .+.+.+.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 57777742 22222 3333333321 123334555 689999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCchhhc---cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 471 Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
|||++++|||+|| .|+|+|+..+..+.+ +.+|+++++.|++++|++|.++++.+ +.+..+.+++++.+++++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999995 899999876655544 34899999999999999999999865 466666777788889999
Q ss_pred HHHHHHHHH
Q 005855 548 AQEWAETFV 556 (673)
Q Consensus 548 ~~~W~~~fl 556 (673)
++.++++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 988888764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-20 Score=196.52 Aligned_cols=274 Identities=23% Similarity=0.176 Sum_probs=192.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc----hHHH-HhhhcCCEEEEeCHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLL-RAVLAADLVGFHTYDYARHFVSA 305 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r----~~il-~~ll~aDlIgF~t~~~~~~Fl~~ 305 (673)
..|+|++|......+......+..+.++.+++|..||..-........ ..+. .....+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999987554433333323345678888899877632211111111 1122 2234688888887765542211
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHH
Q 005855 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385 (673)
Q Consensus 306 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af 385 (673)
....++.++|+|+|.+.|.+..... .....+. ..++++|+++||+.+.||+..+++|+
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~ 219 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE---ALRARLG--PPDRPVLLYVGRLAPEKNLEALLDAD 219 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH---HHHHHhC--CCCCeEEEEEeccccccCHHHHHHHH
Confidence 0123678899999998886532211 1111111 24578899999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEE
Q 005855 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (673)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (673)
..+.++ |+ +.|+++|.. ++...++ .. ...|.+ .|.++.+++..+|+.||++++
T Consensus 220 ~~l~~~-~~----~~l~i~G~~-----~~~~~~~--------~~--------~~~v~~-~g~~~~~~~~~~~~~~d~~l~ 272 (364)
T cd03814 220 LPLRRR-PP----VRLVIVGDG-----PARARLE--------AR--------YPNVHF-LGFLDGEELAAAYASADVFVF 272 (364)
T ss_pred HHhhhc-CC----ceEEEEeCC-----chHHHHh--------cc--------CCcEEE-EeccCHHHHHHHHHhCCEEEE
Confidence 998776 55 458877732 2221221 10 113554 577899999999999999999
Q ss_pred cCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 466 ~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|.++++++|.++++.+ +++.++..++++.+
T Consensus 273 ~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (364)
T cd03814 273 PSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARAEA 347 (364)
T ss_pred CcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH
Confidence 999999999999999995 899999999988888 36899999999999999999999865 46777778888888
Q ss_pred hhCCHHHHHHHHHHHH
Q 005855 544 TTHTAQEWAETFVSEL 559 (673)
Q Consensus 544 ~~~~~~~W~~~fl~~L 559 (673)
.++++..+++++++.+
T Consensus 348 ~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 348 ERRSWEAFLDNLLEAY 363 (364)
T ss_pred hhcCHHHHHHHHHHhh
Confidence 8899999998887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-19 Score=198.65 Aligned_cols=219 Identities=17% Similarity=0.157 Sum_probs=154.6
Q ss_pred hhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCc
Q 005855 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK 364 (673)
Q Consensus 285 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~ 364 (673)
+..+|.|.+.+......+.+ .. .....++.++|+|||.+.|.+...... ....+++
T Consensus 170 ~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~~---------~~~~~~~ 225 (397)
T TIGR03087 170 AARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYPN---------PYPPGKR 225 (397)
T ss_pred HhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCccccC---------CCCCCCc
Confidence 34678888777765554432 11 112347889999999998865321100 0013567
Q ss_pred eEEEeecccccCChHHHH----HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 365 VMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 365 iIl~VgRLd~~KGi~~~L----~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
+|+++||+++.||++.++ +++..+.+++|++ .|+++|.. ++ .+++++... ..
T Consensus 226 ~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~g-----~~-----~~~~~l~~~----------~~ 281 (397)
T TIGR03087 226 VLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGAK-----PS-----PAVRALAAL----------PG 281 (397)
T ss_pred EEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECCC-----Ch-----HHHHHhccC----------CC
Confidence 899999999999999888 5666677777765 48888742 21 123333111 12
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-cCceEEECCCCHHHHH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVA 518 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA 518 (673)
|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||| .|+|+|..++..... +..|+++. .|++++|
T Consensus 282 V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la 353 (397)
T TIGR03087 282 VT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-ADPADFA 353 (397)
T ss_pred eE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CCHHHHH
Confidence 55 467776 68899999999999996 599999999999995 888988864322111 34688886 8999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHH
Q 005855 519 NAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (673)
Q Consensus 519 ~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~ 560 (673)
++|.++++++ +.+..+.+++++++ ++|+++..++++.+.+.
T Consensus 354 ~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 354 AAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 9999999864 46777888888887 57899988888876653
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=200.87 Aligned_cols=195 Identities=17% Similarity=0.188 Sum_probs=146.4
Q ss_pred eecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
+|+|||++.|.+.... ..+..+.+...+++..+|++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~~--~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEKL--VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccchh--hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 6789999998763210 1112222222234667899999999999999999999999999998766777876651
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeC--CCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCc
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g 488 (673)
.. ++++ +..+ .|+++. |.++.+++.++|+.||+||+||..||||++++|||||| .
T Consensus 192 --~~-------~~~l--------~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~ 248 (335)
T PHA01633 192 --KQ-------FTQL--------EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----T 248 (335)
T ss_pred --HH-------HHHc--------CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----C
Confidence 11 1111 1111 355543 67789999999999999999999999999999999995 8
Q ss_pred eEEEeCCCCchhhcc------------------C--ceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCH
Q 005855 489 VLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (673)
Q Consensus 489 ~lVlSe~aG~~~~lg------------------~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~ 548 (673)
|+|+|..+|..|..| . .|+++++.|++++|++|..++.+.. +..+..++++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcCH
Confidence 999998888777543 1 2567889999999999999988764 33445667889999998
Q ss_pred HHHHHHHH
Q 005855 549 QEWAETFV 556 (673)
Q Consensus 549 ~~W~~~fl 556 (673)
+.-.++|+
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 88877764
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-19 Score=187.34 Aligned_cols=259 Identities=18% Similarity=0.181 Sum_probs=178.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.+..+..+.....+..++++.+++|-.++.... ...+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~------~~~~~---~~~d~ii~~s~~~~~~~~~----~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR------QGLFK---KGGDAVIAPSRFLLDRYVA----N- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch------hhhhc---cCCCEEEEeCHHHHHHHHH----c-
Confidence 35999999875554433322233458899999965432111 11111 1128888877655554432 1
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11357899999999987754211 012457789999999999999999999998865
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-C
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (673)
+ ++.|+++|.... ........ ..+ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~----~~~l~i~G~~~~-----~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --G----DIELVIVGNGLE-----LEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --c----CcEEEEEcCchh-----hhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 3 356888874321 11111111 111 1344 5789999999999999999999997 7
Q ss_pred cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 470 EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++.+ +.++.+.+++++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999995 899999999988888 34799999999999999999999854 4566666666666543
Q ss_pred HHHHHHHHHHHH
Q 005855 548 AQEWAETFVSEL 559 (673)
Q Consensus 548 ~~~W~~~fl~~L 559 (673)
...++++++.+
T Consensus 347 -~~~~~~~~~~~ 357 (359)
T cd03823 347 -EDQAEEYLKLY 357 (359)
T ss_pred -HHHHHHHHHHh
Confidence 55555555443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=199.63 Aligned_cols=280 Identities=11% Similarity=0.026 Sum_probs=180.8
Q ss_pred CCCCEEEEeCccch--hHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcch---HH---HHh--hhcCCEEEEeCHHHH
Q 005855 230 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---DL---LRA--VLAADLVGFHTYDYA 299 (673)
Q Consensus 230 ~~~DvVwvHDyhl~--llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~---~i---l~~--ll~aDlIgF~t~~~~ 299 (673)
+..|+|++|..... .+...+-.+..+.++++.+|--+++..... .+... .+ ++. ...||.|...+....
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~ 172 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMK 172 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHH
Confidence 35699999985432 222333233356889988886443211010 11000 01 111 235788877776544
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHH---------------H--hcC
Q 005855 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FAG 362 (673)
Q Consensus 300 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~~ 362 (673)
+.+.+ .+ ....++.++|+| +...|.+.... ........ . -++
T Consensus 173 ~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (415)
T cd03816 173 EDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEER 231 (415)
T ss_pred HHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCCC
Confidence 33321 11 124578899999 55677654211 11111110 0 123
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCc--cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~--~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
..+++++||+.+.||+..+|+|+..+.+..++. ..++.|+++|. +++.+ ++++++.+.+ ...
T Consensus 232 ~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~----~l~~~~~~~~-------l~~ 295 (415)
T cd03816 232 PALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKE----KYLERIKELK-------LKK 295 (415)
T ss_pred ceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHH----HHHHHHHHcC-------CCc
Confidence 467889999999999999999999987642110 12467888874 33333 3444444322 235
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEc---CCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVT---SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 515 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~---Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~ 515 (673)
++++.+.++.+++..+|+.||++|++ +..+||+++++|||||| .|+|+|+.+|..+.+ |.+|++|+ |++
T Consensus 296 ~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~~ 369 (415)
T cd03816 296 VTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DSE 369 (415)
T ss_pred EEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CHH
Confidence 77778889999999999999999974 33588999999999995 899999999988888 56899994 999
Q ss_pred HHHHHHHHHhcCC--HHHHHHHHHHhhHHHhhCCHHHHHHHHHH
Q 005855 516 EVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (673)
Q Consensus 516 ~lA~aI~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (673)
++|++|.++++++ ++++.++.+++++..+. +|.+.+.+
T Consensus 370 ~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~----~~~~~~~~ 409 (415)
T cd03816 370 ELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL----RWDENWDR 409 (415)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc----CHHHHHHH
Confidence 9999999999972 56777777777777643 45555443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=193.87 Aligned_cols=214 Identities=12% Similarity=0.067 Sum_probs=153.9
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceE
Q 005855 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (673)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 366 (673)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+.... ..++.+|
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~~-------------~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPKE-------------KPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCccc-------------cCCCEEE
Confidence 488888888765555432 1110 12368899999999988643110 1244566
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCC
Q 005855 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (673)
Q Consensus 367 l~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (673)
++++|+.+.||++.+|+|++.+.+++|+ +.|+++|.. +. +. . +. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~~-----~~--~~--~---l~-~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSSN-----ML--DP--R---LF-GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeCc-----cc--ch--h---hc-ccc------c------eec
Confidence 6778899999999999999999887765 458877721 11 11 1 10 011 1 135
Q ss_pred CCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECC-------------
Q 005855 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------------- 511 (673)
Q Consensus 447 ~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP------------- 511 (673)
.++.+++..+|+.||+||+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++|++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6788999999999999999999999999999999995 999999998888877 456666532
Q ss_pred ------CCHHHHHHHHHHHhcCC--HHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 512 ------WNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 512 ------~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
.|.+++++++.++|..+ ++.++......+...+++++...++++++.+++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 27889999999999874 333434444455677899999999999887753
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=190.74 Aligned_cols=264 Identities=22% Similarity=0.212 Sum_probs=180.5
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
.+.|+|++|+...+.....+... .+.+..+++|........+..+ ........+..+|.|.+.+..+.+.+.. .
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~ 155 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV----L 155 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH----h
Confidence 45699999986544332222222 4667788888643221111100 1111223456789888887765554321 1
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
. ....++.++|+|+|.+.|.+.... . ........++++|+++||+.+.||+..+++|++++.
T Consensus 156 -~-----------~~~~~~~~i~~gi~~~~~~~~~~~---~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 217 (357)
T cd03795 156 -R-----------RFRDKVRVIPLGLDPARYPRPDAL---E---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP 217 (357)
T ss_pred -c-----------CCccceEEecCCCChhhcCCcchh---h---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc
Confidence 1 112478899999999887643210 0 011111246789999999999999999999999864
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (673)
++.|+++|.+ +... .+.+++.+.+. . ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 218 --------~~~l~i~G~g-----~~~~----~~~~~~~~~~~----~--~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~~ 273 (357)
T cd03795 218 --------DAPLVIVGEG-----PLEA----ELEALAAALGL----L--DRVR-FLGRLDDEEKAALLAACDVFVFPSVE 273 (357)
T ss_pred --------CcEEEEEeCC-----hhHH----HHHHHHHhcCC----c--ceEE-EcCCCCHHHHHHHHHhCCEEEeCCcc
Confidence 4668888742 3222 33344333221 1 1355 5799999999999999999999996
Q ss_pred -CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc---cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 469 -RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 469 -~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
.||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ ++++++.+++++++.
T Consensus 274 ~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (357)
T cd03795 274 RSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERAE 348 (357)
T ss_pred cccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHH
Confidence 599999999999995 899999989888876 46899999999999999999999865 477777888888875
Q ss_pred hC
Q 005855 545 TH 546 (673)
Q Consensus 545 ~~ 546 (673)
++
T Consensus 349 ~~ 350 (357)
T cd03795 349 EE 350 (357)
T ss_pred Hh
Confidence 53
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-19 Score=186.15 Aligned_cols=273 Identities=20% Similarity=0.132 Sum_probs=191.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCC--cchHH-HHhhhcCCEEEEeCHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDL-LRAVLAADLVGFHTYDYARHFVSACT 307 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp--~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (673)
..|+|++|..+..++..+.+......++.+.+|...+.... .... ....+ ...+..+|.+.+.+....+.+.+
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--- 155 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALK--- 155 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHH---
Confidence 45999999887777777776656667788877765321110 0000 00011 12234678999888777666543
Q ss_pred HHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHH
Q 005855 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (673)
Q Consensus 308 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ 387 (673)
.... ....++.+.|+|+|.+.+.+.... ...++..|+++||+.+.||+..+++|++.
T Consensus 156 -~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 156 -LGII----------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred -hcCC----------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 1000 012467788999999877543210 12467899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcC
Q 005855 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (673)
Q Consensus 388 ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (673)
+.+++|+ +.|+++|...... ..... ++...+. ...|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~~-----~~~~~---~~~~~~~------~~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEEN-----PAAIL---EIEKLGL------EGRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcch-----hhHHH---HHHhcCC------cceEEE-eec--cccHHHHHHhccEEEecC
Confidence 9877765 4588787543211 11111 1222111 113554 454 578999999999999999
Q ss_pred CCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH-Hh
Q 005855 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (673)
Q Consensus 468 l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~ 544 (673)
..||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++.++++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999995 899999999999888 56799999999999999999988765 4666667777777 57
Q ss_pred hCCHHHHHHHHH
Q 005855 545 THTAQEWAETFV 556 (673)
Q Consensus 545 ~~~~~~W~~~fl 556 (673)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=198.58 Aligned_cols=187 Identities=11% Similarity=0.027 Sum_probs=134.1
Q ss_pred eecCcChhhhhhhhcCChhHHHHHHHHHHhcC--CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC
Q 005855 331 FPIGIDSERFIRALEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 408 (673)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~--~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~ps 408 (673)
.+.|||++.|.+.... ..+... -.+ .+++++||||.+.||+..+|+|+..+.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~------~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG--- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK------LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG--- 266 (462)
T ss_pred cCceechhhcCCCccc------HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC---
Confidence 4589999988754211 111111 112 346899999999999999999999998877764 588786
Q ss_pred CCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCc
Q 005855 409 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (673)
Q Consensus 409 r~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g 488 (673)
+||+.++|++.+.++ +- .+++|.|..+.+ ++|+.+||||+||.+||||+|++|||||| .
T Consensus 267 --dGp~~~~L~~~a~~l----~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G----~ 325 (462)
T PLN02846 267 --SGEDSDEVKAAAEKL----EL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG----K 325 (462)
T ss_pred --CCccHHHHHHHHHhc----CC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC----C
Confidence 456655555444433 21 234467765544 68999999999999999999999999995 8
Q ss_pred eEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHH
Q 005855 489 VLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 489 ~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 561 (673)
|+|+++..| .+.+ +.+|++++ |.++++++|.++|+.++++.. .+. ...++++.-+++|++.+.-
T Consensus 326 PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~~~~~~~---~~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 326 IVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAEEPAPLT---DAQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred cEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHccCchhHH---HHH---HHhCCHHHHHHHHHHHhcc
Confidence 888888776 5767 67888884 899999999999986542221 112 2477877777777776653
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.7e-19 Score=186.40 Aligned_cols=243 Identities=19% Similarity=0.156 Sum_probs=167.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|+....++ + .+..+.++.+.+|..++.... .........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 459999999887766 2 234567888899987542211 123334455555544433222110
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
. ..++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 148 ------------~-~~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 148 ------------P-LPWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred ------------c-ccccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 0 1467899999999888641 1246789999999999999999999764
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-C
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (673)
++ +.|+++|... ..+ .+...+.+... ++ ..|+ +.|.++.+++..+|+.||++++||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4588787532 111 22222222210 11 1355 5789999999999999999999997 5
Q ss_pred cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH-HhhC
Q 005855 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (673)
Q Consensus 470 EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~~~ 546 (673)
||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+ ++++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999995 899999999999888 347999987 99999999999765431 12222 3667
Q ss_pred CHHHHHHHHHHH
Q 005855 547 TAQEWAETFVSE 558 (673)
Q Consensus 547 ~~~~W~~~fl~~ 558 (673)
+++.-++++++.
T Consensus 322 s~~~~~~~~~~~ 333 (335)
T cd03802 322 SAARMVDDYLAL 333 (335)
T ss_pred CHHHHHHHHHHH
Confidence 777777766553
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-18 Score=195.36 Aligned_cols=264 Identities=10% Similarity=0.074 Sum_probs=161.9
Q ss_pred CCCEEEEeCccch-hH--HHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHH--
Q 005855 231 DGDVVWCHDYHLM-FL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (673)
Q Consensus 231 ~~DvVwvHDyhl~-ll--p~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~-- 305 (673)
+.|+||+|..-.+ .. +....+++. +++..+||.|+.+--...+..-+..+. .++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 5699999885444 33 233333333 588889999985322222221111111 122223322
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc---CCceEEEeecccccCChHHHH
Q 005855 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (673)
Q Consensus 306 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~~L 382 (673)
|+.++.++.... .+. ...+. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 344433221000 111 11111 1259999999864321 011 1221 235589999999999999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCE
Q 005855 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (673)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (673)
+|+..+.++.|+ +.|+++| +||+..+++ +++.+.+. .|.| .|.. ++...+|+.+||
T Consensus 566 eAla~L~~~~pn----vrLvIVG-----DGP~reeLe----~la~eLgL--------~V~F-LG~~--dd~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDG----FNLDVFG-----NGEDAHEVQ----RAAKRLDL--------NLNF-LKGR--DHADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCC----eEEEEEc-----CCccHHHHH----HHHHHcCC--------EEEe-cCCC--CCHHHHHHhCCE
Confidence 999998877775 4588887 345444444 44433221 2554 4443 334579999999
Q ss_pred EEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 005855 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (673)
Q Consensus 463 ~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (673)
||+||.+||||+|++|||||| .|+|+++..|.. .+ |.+|++. .|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999995 899999988743 34 4566654 799999999999999775 22221 1
Q ss_pred HHHhhCCHHHHHHHHHHHH
Q 005855 541 THVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~L 559 (673)
...++++..-++++++.-
T Consensus 690 -a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HHhhCCHHHHHHHHHHhh
Confidence 133677777777776543
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-18 Score=187.19 Aligned_cols=248 Identities=20% Similarity=0.171 Sum_probs=169.8
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCC----ch-hhhhcCCcc-------------hHHHHhhhcCCEE
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSR-------------SDLLRAVLAADLV 291 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP----~~-e~fr~lp~r-------------~~il~~ll~aDlI 291 (673)
.+.|+|+++...... ..+ ..+..+..+++|.|.+ .. ......+.. ......+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 356999876532222 111 3456777888898621 11 111111110 0112234678888
Q ss_pred EEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeec
Q 005855 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (673)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgR 371 (673)
...+....+.+.+ ..+ .+..++|+|+|.+.|.+.. ..+++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~--------------~~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG--------------RDATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC--------------CCcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8887766555432 111 1346789999998875421 23567999999
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHH
Q 005855 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (673)
Q Consensus 372 Ld~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~ 451 (673)
+.+.||++.+++|++++ | +.|+++|. +++.+.++ + ... ..|. +.|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~----~---~~~--------~~V~-~~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLR----A---KAG--------PNVT-FLGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHH----h---hcC--------CCEE-EecCCCHH
Confidence 99999999999999865 3 34777874 33332332 2 111 2365 46899999
Q ss_pred HHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCH
Q 005855 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (673)
Q Consensus 452 el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (673)
++.++|+.||++++||. ||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999995 899999999988877 468999999999999999999998774
Q ss_pred HHHHHHHHHhhHHHhhCCHHHHHHH
Q 005855 530 EEREKRHWHNFTHVTTHTAQEWAET 554 (673)
Q Consensus 530 ~er~~r~~~~~~~v~~~~~~~W~~~ 554 (673)
...+.+++.+.++++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 122344555666776666554
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-18 Score=184.74 Aligned_cols=269 Identities=16% Similarity=0.043 Sum_probs=178.5
Q ss_pred CCEEEEeCccch--hHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHH-----HhhhcCCEEEEeCHHHHHHHHH
Q 005855 232 GDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 232 ~DvVwvHDyhl~--llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il-----~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
.|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 85 ~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~- 159 (363)
T cd04955 85 RDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK- 159 (363)
T ss_pred CCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH-
Confidence 456666654433 33333333 367888888853111111110 0 01111 234568888887765444332
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
...+ ... .++|+|+|...+.+. . ..... ....+++.|+++||+.+.||+..+++|
T Consensus 160 ---~~~~------------~~~--~~i~ngv~~~~~~~~---~---~~~~~--~~~~~~~~i~~~G~~~~~Kg~~~li~a 214 (363)
T cd04955 160 ---EKYG------------RDS--TYIPYGADHVVSSEE---D---EILKK--YGLEPGRYYLLVGRIVPENNIDDLIEA 214 (363)
T ss_pred ---HhcC------------CCC--eeeCCCcChhhcchh---h---hhHHh--cCCCCCcEEEEEecccccCCHHHHHHH
Confidence 1111 111 789999998776430 0 11111 112355678999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
+.++.. ++.|+++|..... ..+.+.+.+. ++.. ..|+ +.|.++.+++..+|+.||+++
T Consensus 215 ~~~l~~-------~~~l~ivG~~~~~-----~~~~~~~~~~-------~~~~--~~V~-~~g~~~~~~~~~~~~~ad~~v 272 (363)
T cd04955 215 FSKSNS-------GKKLVIVGNADHN-----TPYGKLLKEK-------AAAD--PRII-FVGPIYDQELLELLRYAALFY 272 (363)
T ss_pred HHhhcc-------CceEEEEcCCCCc-----chHHHHHHHH-------hCCC--CcEE-EccccChHHHHHHHHhCCEEE
Confidence 987632 4668888854211 1233333321 1111 1355 579999999999999999999
Q ss_pred EcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 465 VTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 465 v~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
+||.. ||||++++|||||| .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+..+.+++++.+
T Consensus 273 ~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~~~~ 345 (363)
T cd04955 273 LHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAARERI 345 (363)
T ss_pred eCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHHHHH
Confidence 99999 99999999999995 899999999988888778999998776 999999999976 45666677778777
Q ss_pred h-hCCHHHHHHHHHHHH
Q 005855 544 T-THTAQEWAETFVSEL 559 (673)
Q Consensus 544 ~-~~~~~~W~~~fl~~L 559 (673)
. .++++.-+++|++.+
T Consensus 346 ~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 346 REKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCCHHHHHHHHHHHh
Confidence 5 488888787777654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-18 Score=178.67 Aligned_cols=246 Identities=19% Similarity=0.152 Sum_probs=167.1
Q ss_pred CCCEEEEeCc-cchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDy-hl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
..|+|++|++ ...++..+.+ +. +.++.+.+|..++..... ..+........+..+|.+.+.+......+.+ .
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~ 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAA-RL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLK----L 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHh-hc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHH----h
Confidence 4599999998 4444444433 33 789999999876532211 1111112334456788888887765555432 1
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
.+. ...++.++|+|+|.+.+.+..... . .. ....++.+|+++||+++.||+..+++|+..+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEEP-----L-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccchh-----h-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 111 135788999999998876532110 0 00 11246789999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (673)
++.++ +.|+++|.+ +....++ +++.+.+. . ..|. +.+.+ +++..+|+.||+++.||..
T Consensus 216 ~~~~~----~~l~i~G~~-----~~~~~~~----~~~~~~~~----~--~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGDG-----PLREELE----ALAKELGL----A--DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcCC-----ccHHHHH----HHHHhcCC----C--ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77654 458877742 2222333 34333331 1 1244 45554 4688999999999999999
Q ss_pred cCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHH---HHHHHHhcC
Q 005855 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 527 (673)
Q Consensus 470 EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA---~aI~~aL~m 527 (673)
||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|...+..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999995 899999999988888 5679999999999994 555555544
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.1e-18 Score=179.39 Aligned_cols=196 Identities=21% Similarity=0.323 Sum_probs=148.0
Q ss_pred eEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccc--cCChHHHHHHHHHHHHh-CcCccCce
Q 005855 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 399 (673)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~--~KGi~~~L~Af~~ll~~-~P~~~~~v 399 (673)
.++.++|+|||.+.|.+... ...+..+ .++++++++++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 47889999999988754311 1122222 34566777777654 89999999999988665 33 46
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCC-HHHHHHHHHHcCEEEEcCCCcCCChhHHH
Q 005855 400 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 478 (673)
Q Consensus 400 ~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vv~Sl~EGf~Lv~lE 478 (673)
.++++|... ... . . ..+ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~----~~~---~----~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD----PEI---P----P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc----hhh---h----c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 687776432 100 0 0 111 1244 467887 88999999999999999999999999999
Q ss_pred HHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHH
Q 005855 479 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 555 (673)
Q Consensus 479 amA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~f 555 (673)
||+|+ .|+|+|+.+|..+.+ +.+|+++++.|++++|++|.++++.+ +++.++.+++++.+ .+++++..+++|
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99995 899999999988888 34799999999999999999999865 46667777778777 468999999988
Q ss_pred HHHHHH
Q 005855 556 VSELND 561 (673)
Q Consensus 556 l~~L~~ 561 (673)
++.+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 876653
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=181.42 Aligned_cols=240 Identities=12% Similarity=0.010 Sum_probs=159.0
Q ss_pred CCCCEEEEeCccchh--HHHHHHhhCCCCeEEeEeccCCCchhhhhc-C---Cc----chHHHHh-hhcCCEEEEeCHHH
Q 005855 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-L---PS----RSDLLRA-VLAADLVGFHTYDY 298 (673)
Q Consensus 230 ~~~DvVwvHDyhl~l--lp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~-l---p~----r~~il~~-ll~aDlIgF~t~~~ 298 (673)
...|+|++|..+.+. ++..+-.+..+.++.+.+|..+.. .+.. . +. ...+.+. ...+|.|...+...
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~ 176 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAM 176 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 356999999876532 233333333467888888865311 1100 0 00 0111111 23578888888765
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCCh
Q 005855 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 378 (673)
.+...+ .. |.. +.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||+
T Consensus 177 ~~~l~~----~~------------g~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 177 QHELDQ----NW------------GIR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHH----hc------------CCC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCH
Confidence 544321 11 111 67889984 5777643211 0111 1234678899999999999
Q ss_pred HHHHHHHHHHHH-----------------hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 379 PQKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 379 ~~~L~Af~~ll~-----------------~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
..+++|+..+.. ++| ++.|+++|. |++.+++++.++ +.+ ...+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~----~i~l~ivG~-----G~~~~~l~~~~~----~~~-------l~~v 288 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYP----RLLFIITGK-----GPQKAMYEEKIS----RLN-------LRHV 288 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCC----CeEEEEEeC-----CCCHHHHHHHHH----HcC-------CCce
Confidence 999999988752 234 467998884 444444444443 322 1247
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcC---CCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHH
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITE 516 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~S---l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~ 516 (673)
+++.+.++.++++.+|+.||++|+|+ ..|||+++++|||||| .|+|+|..+|..+.+ |.+|++|+ |+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~ 362 (371)
T PLN02275 289 AFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSE 362 (371)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHH
Confidence 77777889999999999999999853 2489999999999995 899999999988888 67899997 7999
Q ss_pred HHHHHHHHh
Q 005855 517 VANAIARAL 525 (673)
Q Consensus 517 lA~aI~~aL 525 (673)
+|++|.++|
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998875
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-16 Score=175.78 Aligned_cols=319 Identities=21% Similarity=0.188 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCCEEEEeCccchhHHHHHHhh---CCCCeEEeEeccC-----CC-chhhhhcCCc--
Q 005855 211 FAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS-- 277 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~--~~~DvVwvHDyhl~llp~~Lr~~---~~~~~Ig~flH~P-----fP-~~e~fr~lp~-- 277 (673)
+..+....++-++-+-... -.+||||+||||+-++|.++++. ...++.+|++|.- |+ .....-.||.
T Consensus 108 ~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~ 187 (487)
T COG0297 108 AERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEA 187 (487)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHH
Confidence 4455444444433332211 25799999999999999999997 7789999999943 23 1111223341
Q ss_pred -c----------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC
Q 005855 278 -R----------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI 346 (673)
Q Consensus 278 -r----------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~ 346 (673)
. .-+-.++..||.|.--++.|+..... ...| +.-...+.+ +.-++.-|=||||.+...+....
T Consensus 188 ~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t---~~~g-~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~ 261 (487)
T COG0297 188 YASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYT---PEYG-EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDP 261 (487)
T ss_pred hhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcc---cccc-ccchhhhhh--ccccEEEEEeeEEecccCccccc
Confidence 1 23345678889998888888876541 0000 000011111 22467778888987766553211
Q ss_pred -------Ch----hHHHHHHHHHHh--c---CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 347 -------NP----VQVHIKELQETF--A---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 347 -------~~----~~~~~~~lr~~~--~---~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
.+ -.+....|.+.+ . +.+++..|+||+..||++.+++|+..++++. ..||++|.+.
T Consensus 262 ~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~gd-- 333 (487)
T COG0297 262 YIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTGD-- 333 (487)
T ss_pred chhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecCc--
Confidence 00 111223344554 2 5689999999999999999999999999876 3478787531
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceE
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 490 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~l 490 (673)
+ .++..+..++.++..++ .+.-..+..-...+|+.||++++||..||+||+-++||.-| .++
T Consensus 334 --~---~le~~~~~la~~~~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvp 395 (487)
T COG0297 334 --P---ELEEALRALASRHPGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLP 395 (487)
T ss_pred --H---HHHHHHHHHHHhcCceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----Ccc
Confidence 2 56777888887766432 12234466777889999999999999999999999999985 899
Q ss_pred EEeCCCCchhhc-c---------CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH--hhCCHHHHHHHHHHH
Q 005855 491 ILSEFAGAAQSL-G---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSE 558 (673)
Q Consensus 491 VlSe~aG~~~~l-g---------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~ 558 (673)
|+.+.+|.++.+ . .+|+++.|.|+++++.+|.+|+..-..... .++..+... ..++++.=+++|+..
T Consensus 396 Iv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~l 474 (487)
T COG0297 396 IVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVEL 474 (487)
T ss_pred eEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHH
Confidence 999999999987 2 468999999999999999999975331111 022222222 355555556666555
Q ss_pred HHHh
Q 005855 559 LNDT 562 (673)
Q Consensus 559 L~~~ 562 (673)
-+.+
T Consensus 475 Y~~~ 478 (487)
T COG0297 475 YKPL 478 (487)
T ss_pred HHHH
Confidence 4443
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-16 Score=176.19 Aligned_cols=287 Identities=16% Similarity=0.108 Sum_probs=176.5
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHh-hCCCCeEEeEeccCCC-chhhhhcCCcchHHHHh-hhcCCEEEEeCHHHH
Q 005855 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYA 299 (673)
Q Consensus 223 ~~i~~~~~~~DvVwvHDyhl~llp~~Lr~-~~~~~~Ig~flH~PfP-~~e~fr~lp~r~~il~~-ll~aDlIgF~t~~~~ 299 (673)
.++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.. +...++.++ .+.+. +..+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~~---~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKFK---RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHHH---HHHHHHHHhCCEEEECCHHHH
Confidence 444555665 89998877655 444433 2345666665543222 222222221 22222 335899999998887
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCceEEEeecccccCCh
Q 005855 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (673)
Q Consensus 300 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi 378 (673)
+.+.+ +|.. .. +.++|++ +.+.+.... .......+++.+ +++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~~----~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPPE----LAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCChh----hHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77642 2321 22 5566763 333322111 112233456666 578889999875 6889
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccc---cCC--C-CcccEEEeCCCCCHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR---FGT--L-TAVPIHHLDRSLDFPA 452 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~---~g~--~-~~~pV~~~~~~v~~~e 452 (673)
..+++|+.++.+++|++ .|+++| ++++. .+++++++.+.+-. |.. . +-...+++.+ +..+
T Consensus 247 ~~ll~A~~~l~~~~~~~----~liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~--~~~e 312 (425)
T PRK05749 247 ELVLDAHRALLKQFPNL----LLILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD--TMGE 312 (425)
T ss_pred HHHHHHHHHHHHhCCCc----EEEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe--cHHH
Confidence 99999999998888865 477775 34443 12344444332211 100 0 0000122222 3579
Q ss_pred HHHHHHHcCEEEE-cCCCcCCChhHHHHHhhccCCCceEEEeCCCCch-h---hccCceEEECCCCHHHHHHHHHHHhcC
Q 005855 453 LCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-Q---SLGAGAILVNPWNITEVANAIARALNM 527 (673)
Q Consensus 453 l~aly~~ADv~vv-~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~-~---~lg~~gllVnP~D~~~lA~aI~~aL~m 527 (673)
+..+|+.|||+++ +|+.||+|++++|||||| .|+|++...|.. + .+..+|.++.|.|++++|++|.+++++
T Consensus 313 l~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~ 388 (425)
T PRK05749 313 LGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTD 388 (425)
T ss_pred HHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcC
Confidence 9999999999666 678899999999999995 888887654332 2 223578888899999999999999985
Q ss_pred CHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHH
Q 005855 528 SPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (673)
Q Consensus 528 ~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 560 (673)
+ +.+.++++++++++.++. .=.+++++.+.
T Consensus 389 ~-~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 389 P-DARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred H-HHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 4 577888888899987762 33445555554
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=158.59 Aligned_cols=156 Identities=27% Similarity=0.346 Sum_probs=120.1
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcc
Q 005855 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (673)
Q Consensus 361 ~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~-~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~ 439 (673)
.++++|+++||+++.||+..+++|+..+.++ .++ +.|+++|. ++.. ..+..++...+. . .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~----~--~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEYK----KELKNLIEKLNL----K--E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCHH----HHHHHHHHHTTC----G--T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cccc----cccccccccccc----c--c
Confidence 5789999999999999999999999999875 554 55777762 1222 223333333221 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHH
Q 005855 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (673)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~l 517 (673)
.+.+ .+.++.+++.++|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3555 467779999999999999999999999999999999995 899999988888887 567899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhH
Q 005855 518 ANAIARALNMSPEEREKRHWHNFT 541 (673)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~ 541 (673)
+++|.++++++ +.+..+.+++++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-14 Score=153.41 Aligned_cols=264 Identities=17% Similarity=0.134 Sum_probs=164.4
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
+..++|.+..-...+... .+..++++-+|-.|+..... -+.. ......+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 556788876555544444 45667777666444322110 0000 11223356789998877655433211
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
+ + .++.++|+|+|.+.|.+....+.. .+.+. ..++++|+|+|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 367889999999999764322110 01111 14678999999999966654 44433 3
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (673)
+.+|++ .|++||... ...+ ..++ . ....|++ .|.++.+++.++|+.|||+++|+.
T Consensus 228 ~~~p~~----~~vliG~~~--~~~~-------~~~~----~------~~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDW----SFVLIGPVD--VSID-------PSAL----L------RLPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCC----EEEEECCCc--CccC-------hhHh----c------cCCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 456765 488787431 0011 0111 0 0123664 689999999999999999999986
Q ss_pred ----CcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 469 ----~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
.+++++..+|||||| .|+|+|....+.+.. . +..+.+.|+++++++|.++|..+..++..+ ..+.++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~---~~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-D-EVVLIADDPEEFVAAIEKALLEDGPARERR---RLRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-C-cEEEeCCCHHHHHHHHHHHHhcCCchHHHH---HHHHHH
Confidence 357899999999995 888888765544332 3 344446799999999999876554333332 223688
Q ss_pred hCCHHHHHHHHHHHHHH
Q 005855 545 THTAQEWAETFVSELND 561 (673)
Q Consensus 545 ~~~~~~W~~~fl~~L~~ 561 (673)
+||++.=++.++..|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 89888888888766653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=150.84 Aligned_cols=172 Identities=16% Similarity=0.192 Sum_probs=136.4
Q ss_pred eeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCc
Q 005855 320 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (673)
Q Consensus 320 ~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~ 398 (673)
+-.-.+.++.++||-|+++.|.|.+.. +. .+...|+.++||-|.||++.+++.+.++.+++|+.+
T Consensus 163 r~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr-- 228 (426)
T KOG1111|consen 163 RGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR-- 228 (426)
T ss_pred EeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee--
Confidence 333346689999999999999884321 12 345789999999999999999999999999999865
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHH
Q 005855 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (673)
Q Consensus 399 v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lE 478 (673)
++++| |||..-.+++.+++.-- ..++. +.|.++.+++...|...|||+.||+.|.||++++|
T Consensus 229 --fii~G-----DGPk~i~lee~lEk~~l----------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivE 290 (426)
T KOG1111|consen 229 --FIIIG-----DGPKRIDLEEMLEKLFL----------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVE 290 (426)
T ss_pred --EEEec-----CCcccchHHHHHHHhhc----------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHH
Confidence 77776 56655455555555411 13566 47999999999999999999999999999999999
Q ss_pred HHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcC
Q 005855 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 527 (673)
Q Consensus 479 amA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m 527 (673)
|+.|| .++|.+..+|..+.|.++-+...+-+++++++++.++++.
T Consensus 291 AaScG----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 291 AASCG----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred HHhCC----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 99994 7888888999888883332445566789999999998863
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.7e-13 Score=144.29 Aligned_cols=217 Identities=10% Similarity=0.051 Sum_probs=139.6
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCC
Q 005855 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (673)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (673)
.+|.+...+......+.. .|. ...++.+++++||.+.+.+. . ....+++++ +++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 588887766544333321 122 13467788999987544321 1 112345555 368
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh----CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcc
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~----~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~ 439 (673)
++|+++||....||+..+++++..++.. .++ +.++++++. ++ .+++++++... + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G~----~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICGR----NK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEECC----CH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 233 333334421 22 22333433310 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC-----CCchhhccCceEEECCCCH
Q 005855 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 514 (673)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-----aG~~~~lg~~gllVnP~D~ 514 (673)
.|+ +.|.++ ++..+|++||++|.+| .+++++|||||+ .|+|++.. .|.++.+..+|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 354 456664 7999999999999866 378999999995 89999985 2333444223333345899
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHH
Q 005855 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (673)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (673)
++++++|.++|++.+++++++.+++++....+....-++.+++.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99999999999874556777777778887777666666555443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=143.54 Aligned_cols=187 Identities=17% Similarity=0.170 Sum_probs=143.5
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCcc-CceEEEEEEcC-CCCChHHHHHHHHHHHHHHHhhccccCCCCcc
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~-~~v~Lvqvg~p-sr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~ 439 (673)
.+.+...+-|+.|.||+...|.||.++...-|+.. ...+++..|.+ ..+...+..++..++.+++++.+- +|
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g----- 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG----- 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----
Confidence 36788899999999999999999999988775411 13556655532 323344445566677777766431 22
Q ss_pred cEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHH--
Q 005855 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT-- 515 (673)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~-- 515 (673)
..++|....++.+.+.+++.+.+.+.++..|.||+|++|||||+ .|+|++..+|..|++ |.+|++++| +.+
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~ 420 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQEAV 420 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chHHH
Confidence 34556677888888888888899999998899999999999995 999999999999998 789999999 666
Q ss_pred -HHHHHHHHHhcCCHHHHHHHHHHhhHHHhh-CCHHHHHHHHHHHHH
Q 005855 516 -EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELN 560 (673)
Q Consensus 516 -~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~ 560 (673)
.+|++|.++.+.|. .+.+++++.+++|.+ |+++...+++.+.+.
T Consensus 421 ~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 421 AELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 59999999998765 588888999999987 665444444444333
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.7e-12 Score=130.42 Aligned_cols=198 Identities=25% Similarity=0.335 Sum_probs=143.9
Q ss_pred EEEEeecCcChhhhhhh-hcCChhHHHHHHHHHHhcC--CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 005855 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (673)
Q Consensus 327 ~v~viP~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq 403 (673)
++.++|+|+|.+.+... ... ..+ ..+++++||+.+.||+...++|+..+....++ +.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIGL-------------LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccCC-------------CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67789999999988642 000 112 36899999999999999999999999877665 45776
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|..... ...+.. ++...+. . ..+.+ .|.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~----~--~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGL----E--DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCC----C--CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 7643211 122222 3333221 0 13454 788888899999999999999999999999999999995
Q ss_pred cCCCceEEEeCCCCchhhccCc--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHH
Q 005855 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (673)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~--gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~ 560 (673)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-++.+.+.+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 889999999888888433 88888889999999999999887 34444444344444 57777666665555554
Q ss_pred H
Q 005855 561 D 561 (673)
Q Consensus 561 ~ 561 (673)
.
T Consensus 376 ~ 376 (381)
T COG0438 376 E 376 (381)
T ss_pred H
Confidence 4
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-13 Score=142.50 Aligned_cols=82 Identities=29% Similarity=0.430 Sum_probs=75.6
Q ss_pred cchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHH
Q 005855 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKV 656 (673)
Q Consensus 577 L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~ 656 (673)
+....+...|..+++|+|||||||||+++..+| ..+.|+++++++|++|+++++|.|||+|||+..+|++|
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 456677788999999999999999999999999 78999999999999999999999999999999999999
Q ss_pred hcccccceeecc
Q 005855 657 LDLVLFIFFSGL 668 (673)
Q Consensus 657 ~~~~~~~~~~~~ 668 (673)
++ ++++.++|-
T Consensus 75 ~~-v~~i~l~ae 85 (266)
T COG1877 75 FG-VPGIGLIAE 85 (266)
T ss_pred cC-CCCccEEEe
Confidence 99 888877653
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=128.33 Aligned_cols=312 Identities=12% Similarity=0.196 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHHHH---hcC-CCCEEEEe--CccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHh
Q 005855 211 FAAYIKANQMFADVVNK---HYK-DGDVVWCH--DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~---~~~-~~DvVwvH--Dyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ 284 (673)
|..+--.-|+.+..|+. .++ ++| |||- .|.+. +|.+ |. +...+|+.+.|.|--|.++...+-.|..-
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--- 198 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--- 198 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc---
Confidence 44444444444444442 234 555 4663 34433 3333 22 56789999999999888887655432111
Q ss_pred hhcCCEEEEeCHHHHHHHHH------HHHHHhccccC--CCce-eeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHH
Q 005855 285 VLAADLVGFHTYDYARHFVS------ACTRILGFEGT--PEGV-EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355 (673)
Q Consensus 285 ll~aDlIgF~t~~~~~~Fl~------~~~r~l~~~~~--~~~i-~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~ 355 (673)
.+..+---.|-|-|.. +|..+.-++.+ .+.| +.-++ ..+.++.+-++++.+.....+
T Consensus 199 ----~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~t--------- 264 (465)
T KOG1387|consen 199 ----GILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGT--------- 264 (465)
T ss_pred ----chhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcc---------
Confidence 1122222234444432 11111111111 1111 11222 234444444676655443221
Q ss_pred HHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcC--ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcccc
Q 005855 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (673)
Q Consensus 356 lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~--~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~ 433 (673)
+-.....+|++|.+.|.|+.. .|+-+...+.+.|. ....+.|+++| ..|+. .++ +.-+.++.++.+++-.
T Consensus 265 ---e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne-eD~-ervk~Lkd~a~~L~i~- 336 (465)
T KOG1387|consen 265 ---EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE-EDE-ERVKSLKDLAEELKIP- 336 (465)
T ss_pred ---cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh-hhH-HHHHHHHHHHHhcCCc-
Confidence 113457899999999999999 77888888888887 34468888777 45543 222 3344566666665532
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch-hhc----c-CceE
Q 005855 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-QSL----G-AGAI 507 (673)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~-~~l----g-~~gl 507 (673)
..|. |...++.+++..+|..|.+.|.+-..|-||+.+.||||++ ..+|+-..+|.. +++ | .+|+
T Consensus 337 -----~~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~tGF 406 (465)
T KOG1387|consen 337 -----KHVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETTGF 406 (465)
T ss_pred -----cceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCcccee
Confidence 2355 4678999999999999999999999999999999999993 334443444433 222 4 4788
Q ss_pred EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhH
Q 005855 508 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (673)
Q Consensus 508 lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 563 (673)
+.. +.++.|++|.+++.+..+||..+...+|..+.+++-+...+.|.+.+....
T Consensus 407 la~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll 460 (465)
T KOG1387|consen 407 LAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKLL 460 (465)
T ss_pred ecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhh
Confidence 873 678899999999999999988888888999999988888888876665543
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.4e-11 Score=129.47 Aligned_cols=271 Identities=13% Similarity=0.084 Sum_probs=161.4
Q ss_pred HHHHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHH
Q 005855 222 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 301 (673)
Q Consensus 222 A~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~ 301 (673)
..++++..+| |+|++| +....++.+.+....++++...+ +.|-. + ...+ ...+|.+...+....+.
T Consensus 96 l~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~---~~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWV---HREVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-cccc---cCCCCEEEECCHHHHHH
Confidence 3444444554 999985 55556776655555556655322 21210 0 0001 12588888777654444
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCc-eEEEeecccccCC
Q 005855 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKG 377 (673)
Q Consensus 302 Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KG 377 (673)
+.+ .|.+ ..++.++++.++. .|.+.. + . ..+++++ ++++ ++++.|++...||
T Consensus 162 l~~-----~gi~-----------~~ki~v~G~p~~~-~f~~~~--~--~---~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGVP-----------PEQVVETGIPIRS-SFELKI--N--P---DIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCCC-----------hhHEEEECcccCh-HHcCcC--C--H---HHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 322 1221 2345554443432 333211 1 1 1234444 2444 4556799999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHH
Q 005855 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (673)
Q Consensus 378 i~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (673)
+..+++++.. .|+ +.++++++. +.+ +++++++++.+.+ ..|++ .|.+ +++..+|
T Consensus 218 ~~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~--~~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYV--ENIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eech--hhHHHHH
Confidence 9999888753 344 457666532 122 3344555543321 13665 4665 4688999
Q ss_pred HHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC-CCCc----hhhccCceEEECCCCHHHHHHHHHHHhcCCHHHH
Q 005855 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEER 532 (673)
Q Consensus 458 ~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe-~aG~----~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (673)
+.||+++. ++.|++++|||||+ .|+|++. ..|. ...+...|..+.+.|+++++++|.++++.+ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999995 8888876 3442 122334465666789999999999999864 456
Q ss_pred HHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 533 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
.++.++.++....++.+..++.+++.+....+-
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~~ 375 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPNL 375 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhhh
Confidence 666667777777788888888888777655443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.5e-11 Score=129.27 Aligned_cols=247 Identities=17% Similarity=0.166 Sum_probs=151.0
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
+++..+ .|+|++|..... ++..+..+..+.++.++.|..+|. .. +.++ ...+|.|...++...+.
T Consensus 84 ~i~~~~-pDvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--- 148 (350)
T cd03785 84 ILKKFK-PDVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--- 148 (350)
T ss_pred HHHhcC-CCEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---
Confidence 334344 599999875543 333333444466776655554442 10 1111 12367777666533221
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~ 381 (673)
+ ...++.++|+|+|.+.+.+.. . ++++ +++++|+.+++....|+...+
T Consensus 149 -----~-------------~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 199 (350)
T cd03785 149 -----F-------------PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEA 199 (350)
T ss_pred -----C-------------CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHH
Confidence 0 134778899999988775321 0 2222 367788888888778887765
Q ss_pred H-HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 005855 382 L-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 382 L-~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (673)
+ +|++.+.+ + ++.++.++++ + +.+++++.++++ + ..|++ .+.+ +++..+|+.|
T Consensus 200 l~~a~~~l~~--~----~~~~~~i~G~----g-~~~~l~~~~~~~--------~----~~v~~-~g~~--~~~~~~l~~a 253 (350)
T cd03785 200 VPEALAELLR--K----RLQVIHQTGK----G-DLEEVKKAYEEL--------G----VNYEV-FPFI--DDMAAAYAAA 253 (350)
T ss_pred HHHHHHHhhc--c----CeEEEEEcCC----c-cHHHHHHHHhcc--------C----CCeEE-eehh--hhHHHHHHhc
Confidence 4 77776642 2 2333333322 2 223344333322 1 12443 4554 7899999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC--------chhhc--cCceEEECCC--CHHHHHHHHHHHhcCC
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMS 528 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG--------~~~~l--g~~gllVnP~--D~~~lA~aI~~aL~m~ 528 (673)
|++|.+| | +.+++|||+|+ .|+|++...+ .++.+ +..|++|++. |.++++++|.++++.
T Consensus 254 d~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 254 DLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-
Confidence 9999877 3 57899999995 7888876543 13444 3578999987 999999999999974
Q ss_pred HHHHHHHHHHhhHHHhhCCHHH
Q 005855 529 PEEREKRHWHNFTHVTTHTAQE 550 (673)
Q Consensus 529 ~~er~~r~~~~~~~v~~~~~~~ 550 (673)
++.++.+..++++++..+...+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 325 PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred HHHHHHHHHHHHhcCCCCHHHH
Confidence 4566777777777776654433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.8e-11 Score=132.36 Aligned_cols=252 Identities=16% Similarity=0.082 Sum_probs=159.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
+.|+|++|+....+.+. +..+..+.++.++.|..+|.. .+.++ ...+|.+...++.. +. .
T Consensus 91 ~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 35999999855544433 334455678877666544421 01111 12356555444311 10 0
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCceEEEeecccccCChHHHH-HHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~~L-~Af~~l 388 (673)
....++.++|+|||.+.+.+.. .. ..+ .. .+.++|+++|+....|++..++ +|+.++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~~-----~~--~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALAA-----PP--ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhcccc-----hh--hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 1235789999999987664311 00 111 11 3677889999999999887776 888877
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC
Q 005855 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (673)
Q Consensus 389 l~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (673)
... | ..++++|.+ + .+++.+.++ . + .. |. +.+.+ +++..+|+.||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~g-----~-~~~~~~~~~-----~----~---~~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGKG-----D-LEEVRAAYA-----A----G---IN-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCCC-----c-HHHHHHHhh-----c----C---Cc-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 335556532 2 122322221 1 1 11 44 35555 68999999999999877
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCC--------chhhc--cCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG--------~~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
| +.+++|||+|+ .|+|++...| .++.+ +..|+++++.| +++++++|.+++++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999995 7888775432 12334 35689999888 99999999999997 45677777
Q ss_pred HHhhHHHhhCCHHHHHHHHHHHHH
Q 005855 537 WHNFTHVTTHTAQEWAETFVSELN 560 (673)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~L~ 560 (673)
++++++.++++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 788888888888888877776553
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=122.70 Aligned_cols=118 Identities=28% Similarity=0.343 Sum_probs=86.4
Q ss_pred EeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCC
Q 005855 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (673)
Q Consensus 368 ~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~ 447 (673)
++||+.+.||+..+++|+..+.+++|+ +.|+++|... + .. .....+.+. +. ...|.++ +.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~--~-~~--~~~~~~~~~--------~~--~~~v~~~-~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGP--E-RE--YLEELLAAL--------LL--LDRVIFL-GG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCC--C-hH--HHHHHHHhc--------CC--cccEEEe-CC
Confidence 999999999999999999999887765 5588887532 1 11 111111111 11 1246654 55
Q ss_pred C-CHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEE
Q 005855 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (673)
Q Consensus 448 v-~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (673)
+ +.+++..+++.||+++.||..||++.+++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 56677777777999999999999999999999995 899999999988766 4566654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.9e-11 Score=126.00 Aligned_cols=181 Identities=16% Similarity=0.146 Sum_probs=118.9
Q ss_pred EEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCceEEEeecccccCChHHH-HHHHHHHHHhCcCccCceEEEEEEc
Q 005855 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (673)
Q Consensus 329 ~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~~-L~Af~~ll~~~P~~~~~v~Lvqvg~ 406 (673)
.++|+|||...+.+.. + . ..+ .+ +++++|+++||....|++... ++|++++.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~--~--~---~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P--R---ERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc--h--h---hhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 6889999976654310 0 0 111 12 367789999998888987664 4788777542 22 2333432
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCC
Q 005855 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (673)
Q Consensus 407 psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~ 486 (673)
+++ .+. +++.+.+.+ ...++.+. . .++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~-~~~----l~~~~~~~~-------l~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KND-LEK----VKNVYQELG-------IEAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cch-HHH----HHHHHhhCC-------ceEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 222 123 333333322 11233333 2 27899999999999875 4 68999999995
Q ss_pred CceEEEeCCCCc-------hhhc--cCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 487 KGVLILSEFAGA-------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 487 ~g~lVlSe~aG~-------~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
.|+|++...|. ++.+ +.+|+++++.| +++++++|.++++. ++.++++.+++++++.++...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 88888876553 2344 46799999876 99999999999975 4567777788888887776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-09 Score=123.49 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=124.8
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcc
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~--~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~ 439 (673)
+.++|.+|.|+...||++.++.+++++++ ++|+ ..+.+|+.|.+...+.. -+++.+.+.+++.+ -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 55689999999999999999999999985 5554 24778888765433322 23455666666543 0121 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHcCEEEE-cCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECC----
Q 005855 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (673)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv-~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP---- 511 (673)
.|.++. ..+..--..+|..||+++. ||. +|..|+.-+=||.- |.|-+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 466654 3455666678999999999 787 99999999999986 778888888777665 568999985
Q ss_pred --------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHHhhH-HHhhCCHHHHHHHHHHH
Q 005855 512 --------WNITEVANAIARAL-N----MSP----EEREKRHWHNFT-HVTTHTAQEWAETFVSE 558 (673)
Q Consensus 512 --------~D~~~lA~aI~~aL-~----m~~----~er~~r~~~~~~-~v~~~~~~~W~~~fl~~ 558 (673)
.|.+++-++|.+++ . .+. .+-.++++++.. ....+++.+=++.|.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998777 2 111 112233333222 22347777777766553
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.30 E-value=5e-10 Score=121.86 Aligned_cols=252 Identities=15% Similarity=0.143 Sum_probs=143.2
Q ss_pred HhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhh--cCCEEEEeCHHHHHHHHH
Q 005855 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (673)
Q Consensus 227 ~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~ 304 (673)
+..+ .|+|++|......+...+-....+++++...+.- -+.+.+. |+.++..+-+. .+|++.-.+....+++++
T Consensus 83 ~~~~-pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~ 158 (365)
T TIGR00236 83 LEEK-PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR 158 (365)
T ss_pred HHcC-CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 3344 4999999543433433333334467776432221 1111111 12222222111 256665566665555532
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEe-ecc-cccCChHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGV-DRL-DMIKGIPQK 381 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V-gRL-d~~KGi~~~ 381 (673)
.|. ...+|.++++|+....+...... ....++++++ ++++++.. .|. ...||+..+
T Consensus 159 -----~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~l 217 (365)
T TIGR00236 159 -----ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENI 217 (365)
T ss_pred -----cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHH
Confidence 122 24578999999633222221110 0122344443 33455544 465 345999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
++|+.++.+++|+++ +++++.|. ++ .+.++.+ .++ .. ..|+ +.+.++..++..+|+.||
T Consensus 218 l~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~~~---~~~----~~--~~v~-~~~~~~~~~~~~~l~~ad 276 (365)
T TIGR00236 218 FKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPLHK---HLG----DS--KRVH-LIEPLEYLDFLNLAANSH 276 (365)
T ss_pred HHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHHHH---HhC----CC--CCEE-EECCCChHHHHHHHHhCC
Confidence 999999988887653 55554332 11 1222222 111 11 2355 457888999999999999
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEe-CCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 535 (673)
+++.+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...++++ |.|+++++++|.++|+.+ +.+.++
T Consensus 277 ~vv~~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 277 LILTDS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred EEEECC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 999888 55689999995 788886 445554444 2345666 579999999999999854 334433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.7e-10 Score=121.50 Aligned_cols=268 Identities=11% Similarity=0.067 Sum_probs=156.4
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHH-hhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHH
Q 005855 224 VVNKHYKDGDVVWCHDYHLMFLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302 (673)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr-~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~F 302 (673)
++++..+ .|+|+++.. ...+ ..++ ....++|+.. +++-+-.... | + --.+|.+...+......+
T Consensus 98 ~~l~~~k-PDvVi~~~p-~~~~-~~l~~~~~~~iP~~~-v~td~~~~~~-----w----~--~~~~d~~~v~s~~~~~~l 162 (391)
T PRK13608 98 NLLIKEK-PDLILLTFP-TPVM-SVLTEQFNINIPVAT-VMTDYRLHKN-----W----I--TPYSTRYYVATKETKQDF 162 (391)
T ss_pred HHHHHhC-cCEEEECCc-HHHH-HHHHHhcCCCCCEEE-EeCCCCcccc-----c----c--cCCCCEEEECCHHHHHHH
Confidence 3333344 489988522 2233 3344 3334566643 4444311000 1 0 135788877776544443
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCc-eEEEeecccccCCh
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGI 378 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KGi 378 (673)
.+ .|. ...+|.++++.|+.. |.+.. + ...+++++ ++++ +++++||+...||+
T Consensus 163 ~~-----~gi-----------~~~ki~v~GiPv~~~-f~~~~--~-----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~ 218 (391)
T PRK13608 163 ID-----VGI-----------DPSTVKVTGIPIDNK-FETPI--D-----QKQWLIDNNLDPDKQTILMSAGAFGVSKGF 218 (391)
T ss_pred HH-----cCC-----------CHHHEEEECeecChH-hcccc--c-----HHHHHHHcCCCCCCCEEEEECCCcccchhH
Confidence 31 121 134566666666643 43211 1 11233333 2444 55679999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (673)
..+++++ ++..|+ +.++++++. .+ ++.+++.+.. +. . ..|+ +.|.+ +++..+|+
T Consensus 219 ~~li~~~---~~~~~~----~~~vvv~G~----~~---~l~~~l~~~~---~~----~--~~v~-~~G~~--~~~~~~~~ 272 (391)
T PRK13608 219 DTMITDI---LAKSAN----AQVVMICGK----SK---ELKRSLTAKF---KS----N--ENVL-ILGYT--KHMNEWMA 272 (391)
T ss_pred HHHHHHH---HhcCCC----ceEEEEcCC----CH---HHHHHHHHHh---cc----C--CCeE-EEecc--chHHHHHH
Confidence 9999985 233444 446556532 12 2233333322 11 0 1344 34665 57999999
Q ss_pred HcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhh-----ccCceEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 005855 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEERE 533 (673)
Q Consensus 459 ~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~-----lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 533 (673)
.||++|.. +.|+++.|||||+ .|+|++...+..+. +.+.|.-+-+.|.++++++|.++++++ +++.
T Consensus 273 ~aDl~I~k----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~ 343 (391)
T PRK13608 273 SSQLMITK----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLT 343 (391)
T ss_pred hhhEEEeC----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHH
Confidence 99999863 4589999999995 88888854332221 113333333569999999999999864 4667
Q ss_pred HHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 534 KRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 534 ~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
++.+++++....++....++.+++.+......
T Consensus 344 ~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 344 NMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 77778888888888888888888777654433
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.9e-10 Score=121.11 Aligned_cols=244 Identities=14% Similarity=0.056 Sum_probs=139.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|++....++..+..+..+.++.++.|.-. +.+ +..|+......-...+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~------ 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ------ 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHHHHhhhccCCCHHHHHHHHH------
Confidence 459999998766556555555555778876554211 000 01111100000112345554444433333321
Q ss_pred ccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHh--c-CCceEEEeecccc---cCChHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKLL 383 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIl~VgRLd~---~KGi~~~L~ 383 (673)
.+....+|.++++++ |...+.+..... ...++.+ . ++.+++.++|+.. .||+..+++
T Consensus 159 ----------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 159 ----------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred ----------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 112245788889885 654433221110 0111222 2 3456778999875 799999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEE
Q 005855 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (673)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (673)
|++.+.+. ++.++..+. .+....+++ .+.+.+. ....|+ +.+....+++..+|+.||++
T Consensus 223 al~~l~~~------~~~vi~~~~-----~~~~~~l~~----~~~~~~~-----~~~~v~-~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 223 ALAELAEE------DVPVVFPNH-----PRTRPRIRE----AGLEFLG-----HHPNVL-LISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHhc------CCEEEEECC-----CChHHHHHH----HHHhhcc-----CCCCEE-EECCcCHHHHHHHHHcCcEE
Confidence 99987532 234443332 222233333 3333221 001355 45666788999999999999
Q ss_pred EEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCC-CHHHHHHHHHHHhcCCH
Q 005855 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 529 (673)
Q Consensus 464 vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~-D~~~lA~aI~~aL~m~~ 529 (673)
|.+|- | +..|||+|+ .|+|++...+...++..+|+.+.+. |+++++++|.++++.+.
T Consensus 282 v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 282 LTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 99994 4 469999995 8888887655454443566655544 79999999999998754
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.7e-12 Score=135.65 Aligned_cols=73 Identities=18% Similarity=0.419 Sum_probs=65.7
Q ss_pred HHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccccc
Q 005855 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLF 662 (673)
Q Consensus 583 ~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~ 662 (673)
+.+|.++++++|||||||||+|++++| ..+.|+++++++|+.|+++. .|+|||||++++|+++++.. .
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~~--~VAIVSGR~~~~L~~~l~~~-~ 178 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKYF--PTAIISGRSRDKVYELVGLT-E 178 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhCC--CEEEEeCCCHHHHHHHhCCC-C
Confidence 458899999999999999999999999 78999999999999999985 69999999999999999854 4
Q ss_pred ceeec
Q 005855 663 IFFSG 667 (673)
Q Consensus 663 ~~~~~ 667 (673)
+.++|
T Consensus 179 l~laG 183 (384)
T PLN02580 179 LYYAG 183 (384)
T ss_pred ccEEE
Confidence 55555
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-11 Score=125.53 Aligned_cols=63 Identities=29% Similarity=0.422 Sum_probs=42.5
Q ss_pred EEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccccceeec
Q 005855 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLFIFFSG 667 (673)
Q Consensus 595 ~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~~~~~~ 667 (673)
||||||||+|+.++| ..+.|+++++++|++||++|+|+|||||||++++ .++|..++++.++|
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~-~~~~~~~~~i~l~g 63 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDD-LERFGGIPNIGLAG 63 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHH-HHHH-S-SS-EEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH-hHHhcCCCCceEEE
Confidence 799999999999988 7899999999999999999999999999999999 55666678887776
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.6e-09 Score=118.85 Aligned_cols=260 Identities=12% Similarity=0.075 Sum_probs=166.6
Q ss_pred cCCCCEEE--EeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCc--chHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 229 YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 229 ~~~~DvVw--vHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~--r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
..++|++. ++.-|... +....|..++.+..|+ -+. +. -...+..+..+|.+...|.+-.+....
T Consensus 222 ~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~ 289 (519)
T TIGR03713 222 VKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYESLSRADLIIVDREDIERLLEE 289 (519)
T ss_pred CCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhChhhcCeEEEcCHHHHHHHHH
Confidence 56788887 67677665 3333343344445565 111 21 245666777888777666543333221
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
.++.. . ...++..+|++.- +... . ..++..++.|-+++||| +.|-+..+|+|
T Consensus 290 ----~~~~~--------~-~~~~v~~Ip~~~~--~~~~--~----------~s~r~~~~~I~v~idrL-~ek~~~~~I~a 341 (519)
T TIGR03713 290 ----NYREN--------Y-VEFDISRITPFDT--RLRL--G----------QSQQLYETEIGFWIDGL-SDEELQQILQQ 341 (519)
T ss_pred ----Hhhhc--------c-cCCcceeeCccce--EEec--C----------hhhcccceEEEEEcCCC-ChHHHHHHHHH
Confidence 11100 0 1234556776544 1111 0 11222345556666699 99999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC----------------------cccEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT----------------------AVPIH 442 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~----------------------~~pV~ 442 (673)
+.++.+++|+.. |.+.|..+ .. ++.+.+++++.++|..++... -...+
T Consensus 342 v~~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 411 (519)
T TIGR03713 342 LLQYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERI 411 (519)
T ss_pred HHHHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEE
Confidence 999999999854 66666432 11 234556666666654422100 00234
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~a 520 (673)
.|.+..+..++.+.|..|.++|.+|..|||+ +.+||++.| .|.| .-|.++.+ |.||++| .|..++++|
T Consensus 412 ~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V~d~~NG~li--~d~~~l~~a 481 (519)
T TIGR03713 412 AFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYVEHNKNGYII--DDISELLKA 481 (519)
T ss_pred EEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceeeEcCCCcEEe--CCHHHHHHH
Confidence 4677788889999999999999999999999 999999983 5555 56777777 7899999 699999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhHHHhhCCHH
Q 005855 521 IARALNMSPEEREKRHWHNFTHVTTHTAQ 549 (673)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~v~~~~~~ 549 (673)
|...|..+. ...+....+.+.+.+|+..
T Consensus 482 l~~~L~~~~-~wn~~~~~sy~~~~~yS~~ 509 (519)
T TIGR03713 482 LDYYLDNLK-NWNYSLAYSIKLIDDYSSE 509 (519)
T ss_pred HHHHHhCHH-HHHHHHHHHHHHHHHhhHH
Confidence 999998653 4455556666766666543
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.9e-11 Score=123.14 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=61.6
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccccceeecc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLFIFFSGL 668 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~~~~~~~ 668 (673)
|++|+|||||||||+|+.++| ..+.|++++++.|+.|++|++|.|+|+|||+..++...+ .++++.+.|-
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~ 70 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGE 70 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEee
Confidence 578999999999999998888 578899999999999999999999999999999988766 4566656554
Q ss_pred c
Q 005855 669 L 669 (673)
Q Consensus 669 ~ 669 (673)
+
T Consensus 71 h 71 (244)
T TIGR00685 71 H 71 (244)
T ss_pred c
Confidence 3
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.14 E-value=2e-10 Score=106.37 Aligned_cols=129 Identities=26% Similarity=0.328 Sum_probs=89.6
Q ss_pred CceEEEeecccccCChHHHHH-HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~-Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|.++|.. ++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999986 558877752 22 12222 11 136
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHH
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (673)
++ .+.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+ ...|+++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 5666 689999999999999985 789999999999995 88898888 555555 2456677 88999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999985
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-08 Score=110.46 Aligned_cols=240 Identities=14% Similarity=0.022 Sum_probs=144.8
Q ss_pred HHHhcCCCCEEEEeCccchh--H-HHHHHh-hCCCCeEEeEeccCCCchhhhhcCC-cchHHHHhhhcCCEEEEeCHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMF--L-PKCLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~l--l-p~~Lr~-~~~~~~Ig~flH~PfP~~e~fr~lp-~r~~il~~ll~aDlIgF~t~~~~ 299 (673)
+....++||+|++|...+.. + ..+++. +..++++++++|--+|..- .... ........+..||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~--~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRF--DSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhc--cccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45567899999999854432 2 222222 1126999999998766321 1111 12233445667999999998765
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChH
Q 005855 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (673)
Q Consensus 300 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~ 379 (673)
..+.+ .|.. ..++.++++..+...... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 1211 223444454333211100 00113456899999999433211
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 005855 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (673)
Q Consensus 380 ~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (673)
+..|+ +.|+++|.+ ++.. .. ...|+ |.|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~g-----~~~~-----------~~--------~~~V~-f~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGPN-----PEDL-----------EN--------SANIS-YKGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECCC-----cccc-----------cc--------CCCeE-EecCCCHHHHHHHHhc
Confidence 12343 557777732 2111 00 01355 4689999999999998
Q ss_pred cCEEEEcCC-----------CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 460 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 460 ADv~vv~Sl-----------~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
|+.+++.- .-.++--..|||||| .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76666432 123444578999995 999999999999888 56799998 678999998874
Q ss_pred CCHHHHHHHHHHhhHHHhh
Q 005855 527 MSPEEREKRHWHNFTHVTT 545 (673)
Q Consensus 527 m~~~er~~r~~~~~~~v~~ 545 (673)
.++++.++.+++++....
T Consensus 298 -~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKL 315 (333)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 356666666666665543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-10 Score=123.96 Aligned_cols=73 Identities=18% Similarity=0.352 Sum_probs=63.4
Q ss_pred HHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccccc
Q 005855 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLF 662 (673)
Q Consensus 583 ~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~ 662 (673)
+....++++++|||||||||+|++++| ..+.++++++++|+.|+++ ..|+|||||+++.|+++++. +.
T Consensus 90 ~~~~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~~~-~~ 157 (354)
T PLN02151 90 ILHKSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFVKL-TE 157 (354)
T ss_pred HHHhhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHcCC-cc
Confidence 344467788999999999999999999 6789999999999999976 58999999999999999974 55
Q ss_pred ceeec
Q 005855 663 IFFSG 667 (673)
Q Consensus 663 ~~~~~ 667 (673)
+.++|
T Consensus 158 l~laG 162 (354)
T PLN02151 158 LYYAG 162 (354)
T ss_pred ceEEE
Confidence 66665
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.5e-09 Score=112.11 Aligned_cols=144 Identities=19% Similarity=0.181 Sum_probs=94.7
Q ss_pred CCceE-EEe-ecccccC-ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVM-LGV-DRLDMIK-GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iI-l~V-gRLd~~K-Gi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
++++| +.. +|....| ++..+++|++.+.+++|++ .+++++. +.+. ++++++++.+.. | .
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~----~~~~~~~~~~~~---~---~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKR----REQIEEALAEYA---G---L 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----Chhh----HHHHHHHHhhcC---C---C
Confidence 45554 333 4666654 4788999999998887764 4666653 1222 233444433210 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-----------------CCCCchhh
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----------------EFAGAAQS 501 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-----------------e~aG~~~~ 501 (673)
.+.++. .++..+|+.||+++.+| |.+.+|+|+|+ .|+|++ .+.|.++.
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 244333 47899999999999998 78889999995 888877 44455555
Q ss_pred cc----CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 005855 502 LG----AGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (673)
Q Consensus 502 lg----~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (673)
+. ..+++++..|+++++++|.++|+.++ .++++.+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~ 352 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEGF 352 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHHH
Confidence 52 13467788899999999999998653 455544443
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-07 Score=111.95 Aligned_cols=182 Identities=15% Similarity=0.098 Sum_probs=126.7
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~--~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
.+|.++.|+...||...++..++++.+ .+|+ ..+++|+.|.+...+. .-+++.+.+.+++.. .+|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC----CcE
Confidence 378999999999999999999999865 2344 2578887776543332 223455556655541 0221 146
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECC------
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------ 511 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP------ 511 (673)
+|+.+ .+-.--..++..|||++.||. +|.-|+.-+=||.- |+|-+|..-|.-.+. |.+|+.+.+
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 76554 455666678999999999999 89999999999885 889999988887776 788999988
Q ss_pred ------CCHHHHHHHHHHHhc----------CCHHHHHHHHHHhhH-HHhhCCHHHHHHHHHHHHHH
Q 005855 512 ------WNITEVANAIARALN----------MSPEEREKRHWHNFT-HVTTHTAQEWAETFVSELND 561 (673)
Q Consensus 512 ------~D~~~lA~aI~~aL~----------m~~~er~~r~~~~~~-~v~~~~~~~W~~~fl~~L~~ 561 (673)
.|.+++-+.|.+.+- .|. +-.+++++... ..-.+++.+-++.|+..+..
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~-~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPP-GWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 566777777755443 122 33344444333 33467888888888777753
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.6e-07 Score=101.53 Aligned_cols=307 Identities=16% Similarity=0.198 Sum_probs=154.7
Q ss_pred EEEEeCccchhHHHHHHhhCCCCeEEeEeccCCC-------chhhhhcCCc--chH------------HH-HhhhcCCEE
Q 005855 234 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS--RSD------------LL-RAVLAADLV 291 (673)
Q Consensus 234 vVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP-------~~e~fr~lp~--r~~------------il-~~ll~aDlI 291 (673)
+.|.|.|..-+-..++|.+.+.+.-+|+.|---+ ..++|..|+. ..+ +- .+...||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3477888888777889999999999999996533 2233444431 001 11 112344443
Q ss_pred EEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC----ChhHHHHHHH-HHHh------
Q 005855 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI----NPVQVHIKEL-QETF------ 360 (673)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~----~~~~~~~~~l-r~~~------ 360 (673)
-..+.--+. .|..+|+ |..- .|.|||+|.+.|.....- ...++++.++ +..+
T Consensus 226 TTVSeITa~----Ea~~LL~------------r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK------------RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHHS------------S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHhC------------CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 333321111 2333332 2211 366999999877653210 0112233332 2222
Q ss_pred -cCCceEE-Eeecccc-cCChHHHHHHHHHHHHh--CcCccCceEEEEEEcCCCCCh---H------HHHHHHHHHHHHH
Q 005855 361 -AGRKVML-GVDRLDM-IKGIPQKLLAFEKFLEE--NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHEIV 426 (673)
Q Consensus 361 -~~~~iIl-~VgRLd~-~KGi~~~L~Af~~ll~~--~P~~~~~v~Lvqvg~psr~~~---~------ey~~l~~~l~~lv 426 (673)
.++.+++ -.||.++ .||++..|+|+.+|-.. .-.....|+-. +-.|+.... . -+.+|++.+.++.
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~ 367 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQ 367 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHHHH
Confidence 1345554 5799985 89999999999988432 11111124333 334554321 0 1223333333333
Q ss_pred Hhhccc-c-----C---------------------------------------------------------CCCcccEEE
Q 005855 427 GRINGR-F-----G---------------------------------------------------------TLTAVPIHH 443 (673)
Q Consensus 427 ~~IN~~-~-----g---------------------------------------------------------~~~~~pV~~ 443 (673)
.+|..+ | | ..+-..|+|
T Consensus 368 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF 447 (633)
T PF05693_consen 368 EKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIF 447 (633)
T ss_dssp HHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE
T ss_pred HHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEE
Confidence 333110 0 0 011133555
Q ss_pred eCCCCC------HHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-------cCceEEE-
Q 005855 444 LDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAILV- 509 (673)
Q Consensus 444 ~~~~v~------~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-------g~~gllV- 509 (673)
....++ .-++..+.+.+|+.|+||+||++|.+++|+.|.+ .|-|.|+.+|....+ ...|+.|
T Consensus 448 ~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~GV~Vv 523 (633)
T PF05693_consen 448 HPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYGVYVV 523 (633)
T ss_dssp --S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGTEEEE
T ss_pred eeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCcEEEE
Confidence 443333 2467889999999999999999999999999994 899999999987655 1356665
Q ss_pred CC--CC----HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 510 NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 510 nP--~D----~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
+= .+ ++++|+.|.+...++..+|.....+..+.....+|.....-|.++-..+
T Consensus 524 dR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 524 DRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp -SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 22 23 4567777777778887777665555544445567666666565554443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.1e-09 Score=111.82 Aligned_cols=80 Identities=16% Similarity=0.336 Sum_probs=65.0
Q ss_pred CcchHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHH
Q 005855 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (673)
Q Consensus 576 ~L~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~ 655 (673)
.|+.-+-+.++.+.++++|||||||||+|++++| ..+.+++++.++|++|++ ...|+|+|||++..+++
T Consensus 96 al~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~ 164 (366)
T PLN03017 96 ALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYN 164 (366)
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHH
Confidence 3444455566677889999999999999999988 567899999999999995 47899999999999999
Q ss_pred Hhcccccceeec
Q 005855 656 VLDLVLFIFFSG 667 (673)
Q Consensus 656 ~~~~~~~~~~~~ 667 (673)
+++. ..+.++|
T Consensus 165 ~~~l-~~l~l~g 175 (366)
T PLN03017 165 FVKL-AELYYAG 175 (366)
T ss_pred hhcc-cCceEEE
Confidence 9765 4444443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.5e-08 Score=103.34 Aligned_cols=62 Identities=19% Similarity=0.243 Sum_probs=57.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++||+||||||+++..+| ....+++++++.|+.|++++++.|+|+|||+...++++++.+.
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 7899999999999998888 5678899999999999998899999999999999999998754
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.60 E-value=7e-06 Score=90.55 Aligned_cols=135 Identities=17% Similarity=0.115 Sum_probs=84.5
Q ss_pred CCceEEEe--ecccc-cCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGV--DRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~V--gRLd~-~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
++++|+.+ +|..+ .|+++.+++|++.+.+++|+++ +++++.+. ... ..++++.... +. +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~----~~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEY----GP-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHh----CC-C-
Confidence 55665433 59887 7999999999999988888754 54443221 111 1222332222 11 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCC-----------------Cchhh
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-----------------GAAQS 501 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a-----------------G~~~~ 501 (673)
..+.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++.-. +.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13444432 3467999999999999 77888999995 788877322 22222
Q ss_pred c-cCceE---EECCCCHHHHHHHHHHHhcCC
Q 005855 502 L-GAGAI---LVNPWNITEVANAIARALNMS 528 (673)
Q Consensus 502 l-g~~gl---lVnP~D~~~lA~aI~~aL~m~ 528 (673)
+ +.+++ +-+-.+++.+++++.++|+.+
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2 22211 113357889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.6e-07 Score=80.40 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=72.8
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (673)
|++.|+..+|++...+|+|||| +|+|.+...+..+.+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999994 667766677777777 55688888 9999999999999965 5888888999
Q ss_pred hHHHh-hCCHHHHHHHHH
Q 005855 540 FTHVT-THTAQEWAETFV 556 (673)
Q Consensus 540 ~~~v~-~~~~~~W~~~fl 556 (673)
+++|. +|++..-++.|+
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 88886 778777777665
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.2e-05 Score=89.90 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHH
Q 005855 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (673)
Q Consensus 379 ~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (673)
...|+|++.+.++.|++. |=+ |.++ + +...+.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999865 443 5433 1 12334444 22 2 23555554 44567889999
Q ss_pred HcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-C-CCCchhhccCceEEECCCCHHHHHHHHHHHhcCCH
Q 005855 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-E-FAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 529 (673)
Q Consensus 459 ~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e-~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (673)
.||+++.+|..||+++.+.||+.. |.+|+| + ..|..+.+ ..|.+|++.|+++|+++|.++|+.+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 555555 3 33555555 56999999999999999999999764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0019 Score=70.65 Aligned_cols=233 Identities=19% Similarity=0.189 Sum_probs=144.5
Q ss_pred chHHHHhh-hcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHH
Q 005855 278 RSDLLRAV-LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKE 355 (673)
Q Consensus 278 r~~il~~l-l~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~ 355 (673)
++.+.+.| ..-|+|.-|+..+++.|.+ ||... |.+..| -.|.+ ..+........
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~-------------v~v~GNlKfd~~------~~~~~~~~~~~ 222 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP-------------VVVTGNLKFDIE------PPPQLAAELAA 222 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc-------------eEEecceeecCC------CChhhHHHHHH
Confidence 34455554 3679999999999999974 55331 222211 01110 11223345566
Q ss_pred HHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccC
Q 005855 356 LQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (673)
Q Consensus 356 lr~~~~~-~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g 434 (673)
+|..+++ +++++..+. ...--...++|+..+++++|+.. ||+| | ..||. ...+++++.+.|-+++
T Consensus 223 ~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~l----lIlV--P---RHpER---f~~v~~l~~~~gl~~~ 288 (419)
T COG1519 223 LRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLL----LILV--P---RHPER---FKAVENLLKRKGLSVT 288 (419)
T ss_pred HHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCce----EEEe--c---CChhh---HHHHHHHHHHcCCeEE
Confidence 7777776 899998888 33334447899999999999752 3333 3 34443 4567778877775554
Q ss_pred CCCc-------ccEEEeCCCCCHHHHHHHHHHcCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEe----CCCCchhhc
Q 005855 435 TLTA-------VPIHHLDRSLDFPALCALYAVTDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL 502 (673)
Q Consensus 435 ~~~~-------~pV~~~~~~v~~~el~aly~~ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlS----e~aG~~~~l 502 (673)
.-+. ++|.. .. +.-|+..+|+.|||+.+-- +-+-=|=-++|+.+++ .|+|.. .|.-+++.+
T Consensus 289 ~rS~~~~~~~~tdV~l-~D--tmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~----~pvi~Gp~~~Nf~ei~~~l 361 (419)
T COG1519 289 RRSQGDPPFSDTDVLL-GD--TMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFG----TPVIFGPYTFNFSDIAERL 361 (419)
T ss_pred eecCCCCCCCCCcEEE-Ee--cHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcC----CCEEeCCccccHHHHHHHH
Confidence 3221 23432 21 4679999999999988764 3322233469999994 666654 344455545
Q ss_pred -c-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHH
Q 005855 503 -G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (673)
Q Consensus 503 -g-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 560 (673)
. .+|+.|+ |.+.+++++...++. +++|.++.++..+.+.++. .=.++.++.|+
T Consensus 362 ~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~~--gal~r~l~~l~ 416 (419)
T COG1519 362 LQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQNR--GALARTLEALK 416 (419)
T ss_pred HhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhh--HHHHHHHHHhh
Confidence 2 3567776 477888888777775 6788888888888887662 33344444443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.1e-05 Score=80.53 Aligned_cols=55 Identities=22% Similarity=0.417 Sum_probs=47.4
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
||++|+||||++.. ...+++++.+.|++|.++. ..++|+|||+...+++++..++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~~g-~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLREAG-VKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHhCC
Confidence 58999999999741 1357799999999999986 8999999999999999998755
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.029 Score=59.80 Aligned_cols=169 Identities=14% Similarity=0.185 Sum_probs=112.3
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCc-C--ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-D--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P-~--~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
...++++--...+-..+--+++|+..+-++.- + --.++. .+|++ .||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~ll-ciITG----KGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLL-CIITG----KGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEE-EEEcC----CCchhHHHHHHHHHh-----------cc
Confidence 34677788889999999999999986532211 0 011233 33432 456666677777765 46
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCE--EEEcCCCcCCCh--hHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCC
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDV--ALVTSLRDGMNL--VSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW 512 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv--~vv~Sl~EGf~L--v~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~ 512 (673)
..|.+.+-.+.-++.+.++..||. ++.||. -|+-| -+....-|+ .|+++-.|.-..|.+ |.||++++
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg----lPvcA~~fkcl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG----LPVCAVNFKCLDELVKHGENGLVFE-- 390 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC----CceeeecchhHHHHHhcCCCceEec--
Confidence 678877888899999999999995 556664 45444 456666673 666666777666655 78999997
Q ss_pred CHHHHHHHHHHHhcC---CHHHHHHHHHHhhHHHhhCCHHHHHHHHHH
Q 005855 513 NITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (673)
Q Consensus 513 D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (673)
|.+++|+.|..+++. +..+... .++.+++....+|.+...+
T Consensus 391 Ds~eLa~ql~~lf~~fp~~a~~l~~----lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 391 DSEELAEQLQMLFKNFPDNADELNQ----LKKNLREEQELRWDESWER 434 (444)
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHHH----HHHhhHHHHhhhHHHHHHH
Confidence 899999999999972 2233332 2333444445567665433
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00095 Score=67.70 Aligned_cols=54 Identities=9% Similarity=0.206 Sum_probs=43.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||... ....+++..++|++|.+ ....|+|+|||+...+...+..+
T Consensus 4 kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l 57 (230)
T PRK01158 4 KAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLI 57 (230)
T ss_pred eEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHh
Confidence 79999999999963 22356899999999885 36799999999998887665443
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.001 Score=60.23 Aligned_cols=62 Identities=18% Similarity=0.272 Sum_probs=48.5
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++||+||||++....... .....+.+++.+.|+.|.+. ...++|+||+....++.++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE------IEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCccccc------cccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcC
Confidence 4799999999986432100 02346789999999999986 57899999999999999987754
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0012 Score=66.45 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=44.5
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++++|+||||... ....+++..++|++|.+ ....|++.|||+...++..+..++
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~ 56 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIG 56 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhC
Confidence 58999999999963 23467899999999976 468999999999998877765543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0018 Score=67.15 Aligned_cols=54 Identities=22% Similarity=0.365 Sum_probs=44.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+++|++|+||||... ....+++..++|++|.+ +..++|.|||+...+.+.|+..
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~--~i~fviaTGR~~~~~~~~~~~~ 60 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK--VVTVGVVGGSDLSKISEQLGKT 60 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh--CCEEEEECCcCHHHHHHHhccc
Confidence 567789999999963 22356889999999985 3999999999999998888875
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0017 Score=67.76 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=45.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-+++++|+||||... ....+++.+++|++|.+. ...|+|.|||+...+...+....
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 58 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARAK-GVNVVLTTGRPYAGVHRYLKELH 58 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHHC-CCEEEEecCCChHHHHHHHHHhC
Confidence 379999999999964 224678999999999764 57999999999998877766543
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0021 Score=64.97 Aligned_cols=62 Identities=23% Similarity=0.404 Sum_probs=48.9
Q ss_pred EEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc----cceeeccc
Q 005855 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL----FIFFSGLL 669 (673)
Q Consensus 594 l~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~----~~~~~~~~ 669 (673)
+|+|+||||... ...++++.+++|+.|.+. ...++|.|||+...+..++...+ .|...|.+
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999873 233779999999999985 78999999999998888887544 44445554
Q ss_pred c
Q 005855 670 I 670 (673)
Q Consensus 670 ~ 670 (673)
+
T Consensus 66 i 66 (254)
T PF08282_consen 66 I 66 (254)
T ss_dssp E
T ss_pred e
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0021 Score=66.86 Aligned_cols=55 Identities=15% Similarity=0.340 Sum_probs=44.0
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-++|++|+||||... ....+++.+++|++|.+. ...|++.|||....+...+..+
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~~-G~~~~iaTGR~~~~~~~~~~~l 57 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARAREA-GYKVIIVTGRHHVAIHPFYQAL 57 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhc
Confidence 379999999999963 223567889999998875 5799999999998877766554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0026 Score=65.89 Aligned_cols=55 Identities=25% Similarity=0.388 Sum_probs=45.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
+.++|++|+||||... ....+++.+++|++|.+. ...|+|.|||+...+.+.++.
T Consensus 4 ~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 4 KKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred CCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhh
Confidence 4689999999999963 234578899999998774 688999999999988888863
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0021 Score=66.47 Aligned_cols=53 Identities=19% Similarity=0.390 Sum_probs=44.0
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+|++|+||||... ....+++..++|++|.+. ...++|+|||+...+...+..+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~ 53 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKEL 53 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 5899999999974 224678899999999876 6899999999999888877654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0028 Score=65.89 Aligned_cols=55 Identities=20% Similarity=0.301 Sum_probs=44.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++++|+||||... ....+++.+++|++|.+. ...|+|.|||+...+...+..++
T Consensus 3 kli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 57 (266)
T PRK10976 3 QVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTAR-GIHFVFATGRHHVDVGQIRDNLE 57 (266)
T ss_pred eEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhcC
Confidence 68999999999964 224678899999998864 68999999999998877765543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0032 Score=65.89 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=44.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||... ....+++.+++|++|.+. ...|++.|||+...+...+..+
T Consensus 3 kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l 56 (272)
T PRK15126 3 RLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRER-DITLTFATGRHVLEMQHILGAL 56 (272)
T ss_pred cEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHc
Confidence 68999999999963 224678999999998764 6899999999999888776554
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=60.71 Aligned_cols=96 Identities=22% Similarity=0.324 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhCC------CCeEEeEeccC-CC---chhhhh--cC
Q 005855 208 QSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FP---SSEIHR--TL 275 (673)
Q Consensus 208 ~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~------~~~Ig~flH~P-fP---~~e~fr--~l 275 (673)
.+.-..|.-.+++-++.+...-...||||+||||..++|.+||.... +.++.+++|.. |- +.+.+. .+
T Consensus 110 ~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl 189 (245)
T PF08323_consen 110 PDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGL 189 (245)
T ss_dssp TTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCC
Confidence 33344444444444444444212569999999999999999999753 69999999964 22 112221 12
Q ss_pred Ccc--------------hHHHHhhhcCCEEEEeCHHHHHHHH
Q 005855 276 PSR--------------SDLLRAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 276 p~r--------------~~il~~ll~aDlIgF~t~~~~~~Fl 303 (673)
|+. ..+-.|+..||.|..-++.|++.-+
T Consensus 190 ~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 190 PDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTT
T ss_pred CHHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHh
Confidence 321 2455779999999999999987654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0068 Score=56.35 Aligned_cols=52 Identities=13% Similarity=0.088 Sum_probs=38.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
+++++|.||||......+- ....|.+++++.|+.|.+. ...|+++|||+...
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~~-G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKAL-GFEIVISSSRNMRT 53 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHHC-CCEEEEECCCCchh
Confidence 4799999999975321110 1245788999999998764 68899999998754
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0056 Score=63.64 Aligned_cols=56 Identities=20% Similarity=0.300 Sum_probs=46.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+++++|+||||.... ...+++++++|++|.+. .-.|+|+|||+...+.+.+..+.
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~~~l~ 58 (264)
T COG0561 3 IKLLAFDLDGTLLDSN--------------KTISPETKEALARLREK-GVKVVLATGRPLPDVLSILEELG 58 (264)
T ss_pred eeEEEEcCCCCccCCC--------------CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcC
Confidence 4799999999999752 23679999999987664 68899999999998888886544
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0074 Score=63.22 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=48.8
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc-----cce
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL-----FIF 664 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~-----~~~ 664 (673)
..+++++|.||||... ....++..+++|++|.+. ...|++.|||+...+...+..+. .|.
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLREA-QVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4689999999999963 123567899999998864 67899999999998877665542 344
Q ss_pred eecccc
Q 005855 665 FSGLLI 670 (673)
Q Consensus 665 ~~~~~~ 670 (673)
.-|.+|
T Consensus 71 ~NGa~I 76 (271)
T PRK03669 71 ENGAVI 76 (271)
T ss_pred eCCCEE
Confidence 445444
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.011 Score=62.07 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=47.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc----cceee
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL----FIFFS 666 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~----~~~~~ 666 (673)
-+++|+|.||||.... ...+++..++|++|.+. .-.++|+|||....+...+..+. .+...
T Consensus 4 ~kli~~DlDGTLl~~~--------------~~~~~~~~~ai~~l~~~-Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDHH--------------TYSYEPAKPALKALKEK-GIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCCC--------------CcCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 4689999999999631 12356788999998763 56899999999988777666543 44455
Q ss_pred cccc
Q 005855 667 GLLI 670 (673)
Q Consensus 667 ~~~~ 670 (673)
|.+|
T Consensus 69 Ga~i 72 (273)
T PRK00192 69 GAAI 72 (273)
T ss_pred CcEE
Confidence 5443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.3 Score=55.08 Aligned_cols=171 Identities=15% Similarity=0.141 Sum_probs=92.1
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+..++.+..++ .|=-+..++.+.++|++-|+-+ |++...+. .. ++.+.+.+.+ .|. +-..+
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~Gv-~~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----HGV-DPDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----TTS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----cCC-ChhhE
Confidence 44444445554 5677899999999999999754 66665443 11 1223333333 232 22346
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc-h-----hhc---cCceEEECCC
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA-A-----QSL---GAGAILVNPW 512 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~-~-----~~l---g~~gllVnP~ 512 (673)
+| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+ |++|+|--+-. + ..| |-.-++. .
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELIA--D 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhcC--C
Confidence 65 456788999999999999999987766 5788999999 67777643311 1 111 3222222 4
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh---CCHHHHHHHHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELND 561 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~ 561 (673)
|.++..+.-.++-+++ +.++...++.++.+.+ ++...|++.+-..++.
T Consensus 416 s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 416 SEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp SHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 6777666655555544 3455544555555433 4778888877766654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.01 Score=60.69 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=45.2
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc----ccceeecc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV----LFIFFSGL 668 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~----~~~~~~~~ 668 (673)
++|+|+||||.... ..+++.+++|++|.+. ...|+++|||+...+...+..+ +.|..-|.
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999731 1235689999999875 6789999999998877665433 34555555
Q ss_pred cc
Q 005855 669 LI 670 (673)
Q Consensus 669 ~~ 670 (673)
+|
T Consensus 65 ~I 66 (225)
T TIGR02461 65 AI 66 (225)
T ss_pred EE
Confidence 54
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.03 E-value=1.2 Score=49.24 Aligned_cols=233 Identities=18% Similarity=0.199 Sum_probs=123.3
Q ss_pred CCCCEEEEeCccch--hHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (673)
Q Consensus 230 ~~~DvVwvHDyhl~--llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (673)
++.|+|..=||.=+ .+.+.+|++.+..++.++. ++.+|.-=++|-..++.. +|.+.- .+.+-..|++
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-ifPFE~~~y~--- 149 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-IFPFEPEFYK--- 149 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-CCcccHHHHh---
Confidence 35688888787643 5778899998888887764 344544435554444332 232211 1111122221
Q ss_pred HHhccccCCCceeeCCeeeEEEEe-ecCcChhhhhhhhcCChhHHHHHHHHHHh--cCCceEEE--eecccccCC-hHHH
Q 005855 308 RILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLG--VDRLDMIKG-IPQK 381 (673)
Q Consensus 308 r~l~~~~~~~~i~~~gr~~~v~vi-P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~--VgRLd~~KG-i~~~ 381 (673)
..+ .++..+ ++=+|.- .+. .. . ...++.+ .++++|.. =+|-.+.|- ++..
T Consensus 150 --------~~g-------~~~~~VGHPl~d~~--~~~---~~-~---~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~ 205 (373)
T PF02684_consen 150 --------KHG-------VPVTYVGHPLLDEV--KPE---PD-R---AEAREKLLDPDKPIIALLPGSRKSEIKRLLPIF 205 (373)
T ss_pred --------ccC-------CCeEEECCcchhhh--ccC---CC-H---HHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHH
Confidence 111 111211 1112221 111 11 0 1112222 34554443 367666554 4888
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
++|.+++.+++|+++ +++...+. .. .+.+++.....+.. .++... ..+...+++.||
T Consensus 206 l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad 262 (373)
T PF02684_consen 206 LEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAAD 262 (373)
T ss_pred HHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCc
Confidence 999999999999864 55433221 11 22233333222211 123322 245677899999
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCC-----------------Cchhhc-cCc---eEEECCCCHHHHHHH
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-----------------GAAQSL-GAG---AILVNPWNITEVANA 520 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a-----------------G~~~~l-g~~---gllVnP~D~~~lA~a 520 (673)
+.+++| |.+.+|++..+ .|.|+.--. |..-.+ |.. =++-+-.+++.++++
T Consensus 263 ~al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~ 333 (373)
T PF02684_consen 263 AALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAE 333 (373)
T ss_pred chhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHH
Confidence 999999 79999999985 665554333 333322 111 122345689999999
Q ss_pred HHHHhcCCH
Q 005855 521 IARALNMSP 529 (673)
Q Consensus 521 I~~aL~m~~ 529 (673)
+..+|..++
T Consensus 334 ~~~ll~~~~ 342 (373)
T PF02684_consen 334 LLELLENPE 342 (373)
T ss_pred HHHHhcCHH
Confidence 999998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.0095 Score=60.08 Aligned_cols=52 Identities=13% Similarity=0.274 Sum_probs=40.0
Q ss_pred EEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 594 l~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
|++|+||||... ....+++..++|++|.+. ...+++.|||+...+...+..+
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-Gi~~~~aTGR~~~~~~~~~~~l 52 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAESV-GIPVVLVTGNSVQFARALAKLI 52 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHh
Confidence 589999999963 223568889999998764 5789999999998766655433
|
catalyze the same reaction as SPP. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.021 Score=53.83 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=48.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-----hHHHHh-hhcCCEEEEeCHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-----SDLLRA-VLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-----~~il~~-ll~aDlIgF~t~~~~~~Fl~ 304 (673)
+.|+||+|.++...+...... +.++.+++|.+++.........+. ..+... ...+|.+..-+...++.+.
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 569999999887765443322 789999999987421111111111 111111 3568888887765555443
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhh
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~ 341 (673)
+ .|.+ ..++.++|||||++.|+
T Consensus 156 ---~-~~~~-----------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 156 ---K-FGIP-----------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---H-HT-------------SS-EEE----B-CCCH-
T ss_pred ---H-hCCc-----------ccCCEEEECCccHHHcC
Confidence 2 2322 46899999999999884
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.013 Score=68.01 Aligned_cols=58 Identities=14% Similarity=0.277 Sum_probs=46.7
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+.+-++|++|+||||... ....+++.+++|++|.+. ...|+|.|||....+...+..+
T Consensus 305 ~~~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALSR-GVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred ccCccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHh
Confidence 345679999999999963 224678999999999875 6789999999999887776544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.012 Score=59.51 Aligned_cols=54 Identities=7% Similarity=0.027 Sum_probs=41.3
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
++++|.||||.... ...++..+++|++|.+ ....|+|+|||+...++..+..+.
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~ 54 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALG 54 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 58999999999632 1133458899999866 356899999999998887776543
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.36 Score=52.69 Aligned_cols=251 Identities=15% Similarity=0.113 Sum_probs=130.0
Q ss_pred CCCCEEEEeCccc--hhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (673)
Q Consensus 230 ~~~DvVwvHDyhl--~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (673)
++.|++..=|+.= +.+...+|+..|+.||.++. -| .+|.--|.|...+.. .+|++.--.+-. ..|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV---~P--sVWAWr~~Ra~~i~~--~~D~lLailPFE-~~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV---SP--SVWAWRPKRAVKIAK--YVDHLLAILPFE-PAFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE---Cc--ceeeechhhHHHHHH--HhhHeeeecCCC-HHHHH---
Confidence 4568887767553 35788899999999998765 23 344333444222222 344432111111 11111
Q ss_pred HHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh----cCCceEEEe-ecc-cccCChHHH
Q 005855 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGV-DRL-DMIKGIPQK 381 (673)
Q Consensus 308 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~V-gRL-d~~KGi~~~ 381 (673)
-.|.+ ..|=|+ .=.|.-.+.+ ..+..|+++ ..+.+.+.. +|- +-.+-.+..
T Consensus 153 -k~g~~-----~~yVGH--------pl~d~i~~~~---------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 -KFGLP-----CTYVGH--------PLADEIPLLP---------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred -hcCCC-----eEEeCC--------hhhhhccccc---------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 00110 112121 1122111111 111244444 234444443 333 445667788
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
++|++.+.+++|+.+ ++.-.. .+.|+.+..+ ....... .+.. .+...+....+..||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~---~~~~~~~-------~~~~----~~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEE---ALKWEVA-------GLSL----ILIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHH---Hhhcccc-------CceE----EecCchHHHHHHHhh
Confidence 899999999999876 443221 1333333322 2111000 0111 123456778899999
Q ss_pred EEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhh-cc---------------CceEEEC-----CCCHHHHHHH
Q 005855 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LG---------------AGAILVN-----PWNITEVANA 520 (673)
Q Consensus 462 v~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~-lg---------------~~gllVn-----P~D~~~lA~a 520 (673)
+.+..| |.+.+|++.|+ .|.|++--...-.. +. .+-.+|+ -..++.+|++
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~ 337 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARA 337 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHH
Confidence 999999 79999999995 77777754433322 10 1111111 1347899999
Q ss_pred HHHHhcCCH--HHHHHHHHHhhHHHhhC
Q 005855 521 IARALNMSP--EEREKRHWHNFTHVTTH 546 (673)
Q Consensus 521 I~~aL~m~~--~er~~r~~~~~~~v~~~ 546 (673)
+..++..+. ++..+....+++.+++.
T Consensus 338 l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 338 LEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 999998762 23334445556666555
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.019 Score=66.98 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=47.1
Q ss_pred HHHHHhhc---cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 582 SIERYLRS---NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 582 ~~~~y~~s---~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
++..|..+ +++++|+|+||||..... ..++..+++|+.|.+. ...|++.|||+...++..+.
T Consensus 404 ~~~~~~~~~~~~~KLIfsDLDGTLLd~d~--------------~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~ 468 (694)
T PRK14502 404 ARPSRLPSSGQFKKIVYTDLDGTLLNPLT--------------YSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRN 468 (694)
T ss_pred hhcccCCCcCceeeEEEEECcCCCcCCCC--------------ccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHH
Confidence 34444443 478999999999997421 2345778999998864 57899999999998877765
Q ss_pred cc
Q 005855 659 LV 660 (673)
Q Consensus 659 ~~ 660 (673)
.+
T Consensus 469 ~L 470 (694)
T PRK14502 469 EL 470 (694)
T ss_pred Hc
Confidence 44
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.019 Score=53.05 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=46.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC--------HHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~--------~~~L~~~~~~~~ 661 (673)
|+++||+||||+..... ..+.....+.+.+.++|+.|.+. ...++|+|+.. .+.+++++....
T Consensus 1 k~~~~D~dgtL~~~~~~------~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~ 71 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY------VDDEDERILYPEVPDALAELKEA-GYKVVIVTNQSGIGRGKFSSGRVARRLEELG 71 (132)
T ss_pred CEEEEeCCCceecCCCC------CCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCccccccHHHHHHHHHHHHHCC
Confidence 67999999999952110 00113456789999999999754 68999999999 777777776544
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.018 Score=59.75 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=41.0
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
++++|+||||..... . ..+..+++|+.|.+. ...|+++|||+...+..++..+.
T Consensus 1 li~~DlDGTll~~~~-------------~-~~~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~ 54 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG-------------Y-DWGPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELG 54 (256)
T ss_pred CEEEcCCCCCcCCCC-------------c-CchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcC
Confidence 589999999996421 1 223578899998764 67899999999998887776543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.022 Score=60.19 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=43.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
++||+|+||||..... ..++..+++|++|.+. ...|++.|||+...++..+..+.
T Consensus 2 KLIftDLDGTLLd~~~--------------~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lg 56 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF--------------NSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLR 56 (302)
T ss_pred cEEEEeCCCCCcCCCC--------------cCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhC
Confidence 6899999999997421 2346788999999875 78899999999998777665543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.02 Score=55.24 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=42.5
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHH---HHhcc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KVLDL 659 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~---~~~~~ 659 (673)
++++|.||||+.... -+....-. .....++.+.+++++|.+. .+.|+++|||.....+ +|+..
T Consensus 1 iVisDIDGTL~~sd~-~~~~~~~~--~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITKSDV-LGHVVPII--GKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCccccc-cccccccc--ccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHH
Confidence 478999999996421 00000000 0135689999999999875 6889999999987653 55544
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.02 Score=59.10 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=42.0
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVL 657 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~ 657 (673)
+.+++.|+||||.+..+ . ....++++.+.++++.+. ...++++|||+...+.+..
T Consensus 1 ~~li~tDlDGTLl~~~~-~----------~~~~~~~~~~~i~~~~~~-gi~fv~aTGR~~~~~~~~~ 55 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-G----------DNQALLRLNALLEDHRGE-DSLLVYSTGRSPHSYKELQ 55 (249)
T ss_pred CeEEEEcCCCcCcCCCC-C----------ChHHHHHHHHHHHHhhcc-CceEEEEcCCCHHHHHHHH
Confidence 45799999999997321 1 123458999999998864 4599999999998888773
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.014 Score=59.63 Aligned_cols=52 Identities=13% Similarity=0.046 Sum_probs=37.7
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
|+++|+||||.+.. + ..++. .+.++ + .+....++|+|||+...+.+.+....
T Consensus 1 li~~DlDgTLl~~~--~------------~~~~~-~~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~ 52 (236)
T TIGR02471 1 LIITDLDNTLLGDD--E------------GLASF-VELLR-G-SGDAVGFGIATGRSVESAKSRYAKLN 52 (236)
T ss_pred CeEEeccccccCCH--H------------HHHHH-HHHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCC
Confidence 58999999999731 1 12233 36666 4 45567899999999999999987654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=94.88 E-value=3.2 Score=44.95 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=90.2
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE-EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq-vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
..|+-=-.-|++-++...|+++.+.... ++.+++ .+.| ...+++.++|.+...++ ||.. .+.
T Consensus 186 ltILvGNSgd~sNnHieaL~~L~~~~~~------~~kIivPLsYg-----~~n~~Yi~~V~~~~~~l---F~~~---~~~ 248 (360)
T PF07429_consen 186 LTILVGNSGDPSNNHIEALEALKQQFGD------DVKIIVPLSYG-----ANNQAYIQQVIQAGKEL---FGAE---NFQ 248 (360)
T ss_pred eEEEEcCCCCCCccHHHHHHHHHHhcCC------CeEEEEECCCC-----CchHHHHHHHHHHHHHh---cCcc---cee
Confidence 3333334568888888888877764321 233332 2222 11345566676665553 4432 345
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEE----CCCCHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEV 517 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllV----nP~D~~~l 517 (673)
.++..++.+|+.++++.||++++...| .|+|..++= +.+ |.++++|+-.-....+.+.++.| +.-|...+
T Consensus 249 iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lL-l~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v 323 (360)
T PF07429_consen 249 ILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLL-LQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALV 323 (360)
T ss_pred EhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHH-HHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHH
Confidence 568899999999999999999999975 999987642 444 48899999887777774445443 44566666
Q ss_pred HHHHHHHhc
Q 005855 518 ANAIARALN 526 (673)
Q Consensus 518 A~aI~~aL~ 526 (673)
++|=.++..
T Consensus 324 ~ea~rql~~ 332 (360)
T PF07429_consen 324 REAQRQLAN 332 (360)
T ss_pred HHHHHHHhh
Confidence 665554443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.059 Score=56.97 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=45.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCcccccccc-CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~-~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+++||+||||..... .. ..+|++.++|++|.+. ...++|+|++++...+..+....
T Consensus 126 ~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lG 184 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVK 184 (301)
T ss_pred ceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcC
Confidence 57999999999997532 12 2258999999999985 56889999999987777666544
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.64 E-value=1.2 Score=49.64 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=80.4
Q ss_pred eEEEeec-ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccc------cCCCC
Q 005855 365 VMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR------FGTLT 437 (673)
Q Consensus 365 iIl~VgR-Ld~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~------~g~~~ 437 (673)
+|+.-.| =+-.++++.+++|++.+.++ |+ +.++....+. .++..+++.+.+. .++.. .....
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3445566 35567889999999998654 43 4455444332 2233343333221 11100 00000
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc------hhh---ccCceEE
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGAIL 508 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~------~~~---lg~~gll 508 (673)
...+.++ ....++..+|+.||++|..|= -+..|+++++ .|.|+--+.+. .+. +-..++.
T Consensus 278 ~~~~~v~---~~~~~~~~~l~~ADlvI~rSG-----t~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 278 KGTLEVL---LGRGAFAEILHWADLGIAMAG-----TATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred cCceEEE---echHhHHHHHHhCCEEEECcC-----HHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 0012221 123678999999999999863 5669999995 67777653222 111 1024555
Q ss_pred ECCCCHHHHHHHHHHHhcCC
Q 005855 509 VNPWNITEVANAIARALNMS 528 (673)
Q Consensus 509 VnP~D~~~lA~aI~~aL~m~ 528 (673)
+...+++.++++|.++|+++
T Consensus 346 l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred cCCCCHHHHHHHHHHHHcCH
Confidence 56678899999999999854
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.39 E-value=9 Score=41.81 Aligned_cols=243 Identities=15% Similarity=0.094 Sum_probs=118.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
.+|+|.||.=-.-.++..+-...-+++|+.. |---=+.|.. .|.-++..+-+ .-||+----|..++++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 3489998775555555555555567777653 2211111211 12223333332 2466666667666666543
Q ss_pred HhccccCCCceeeCCeeeEEEEe-ecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeeccccc---CChHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 384 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~vi-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~---KGi~~~L~A 384 (673)
.|.+ ..+|.++ ..++|.-........+.. ....+.....++.+++..-|.... ........+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 1221 2244444 445665432221111111 011221122344445555555433 346677778
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
++.+.+. ++ +.+|....++ + .....+.+...+++ .+++ ..+++..++..+++.|+++|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEEE
Confidence 8877776 43 3355443211 2 22333333332221 3553 46889999999999999998
Q ss_pred EcCCCcCCChhHH-HHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcC
Q 005855 465 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (673)
Q Consensus 465 v~Sl~EGf~Lv~l-EamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 527 (673)
--|- .+. ||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.++++.
T Consensus 264 gdSs------GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 7772 445 999994 677766667767665 23455565 8999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.26 E-value=6.2 Score=43.31 Aligned_cols=73 Identities=19% Similarity=0.098 Sum_probs=51.7
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (673)
+. +.+.++..++.+|++.||++|-.|. | ...||.+.+ .|+|. ...-.+.+ |.+.++| +.|++++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----g-gi~EA~~lg----~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----S-GIIEAPSFG----VPTIN--IGTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----h-HHHhhhhcC----CCEEe--ecCCchhhhhcCeEEEe-CCCHHHHH
Confidence 44 5789999999999999999995542 1 228999994 55542 22222222 4556767 67899999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.097 Score=48.40 Aligned_cols=84 Identities=18% Similarity=0.143 Sum_probs=44.5
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHH-----HHhhhcCCEEEEeCHHHHHHHHH
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-----LRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~i-----l~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
.+.|+|++|+++..++..++++. .++++.+.+|..+.... .++...+ -..+..||.|...+...++.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 47899999997543211 1111111 24456799999999877766643
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecC
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~G 334 (673)
.+. ...++.++|||
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 24588999997
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.11 Score=48.24 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=41.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC-CHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR-~~~~L~~~~~ 658 (673)
++|++|+||||++..... .....+- ...++.+++.+.|+.|.+. ...++|+|+. ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~-~~~~~~~-~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIV-VGEDPII-DLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCccc-ccCCcch-hhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHHH
Confidence 589999999999863210 0000000 0014678999999999764 5789999999 6665544443
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.00 E-value=7.2 Score=42.85 Aligned_cols=94 Identities=20% Similarity=0.198 Sum_probs=60.9
Q ss_pred HHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch--hh------c--cCceEEECCCC--HHHHH
Q 005855 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 518 (673)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~--~~------l--g~~gllVnP~D--~~~lA 518 (673)
+++.++|+.||+++.=+= ++++-|..+++ .|.|+=-+...+ ++ + -..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999986552 58999999995 666666555551 22 2 13466665555 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 519 NAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 519 ~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
+.|.++++.+ +....+.++.++.........-++
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~~~p~aa~~i~~ 349 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKLGKPDAAERIAD 349 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999863 334444444444444443333333
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.059 Score=55.90 Aligned_cols=53 Identities=21% Similarity=0.240 Sum_probs=36.9
Q ss_pred CeEEEEccccccc-CCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLT-EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~-~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
++||+.|+||||+ +. ..-..++.+.|+ ....++..++++|||+.+...+.+..
T Consensus 2 ~~ll~sDlD~Tl~~~~---------------~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~ 55 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD---------------DEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLRE 55 (247)
T ss_dssp SEEEEEETBTTTBHCH---------------HHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHH
T ss_pred CEEEEEECCCCCcCCC---------------HHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHh
Confidence 6899999999999 21 111246666666 44566778889999999988877764
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.18 Score=50.03 Aligned_cols=59 Identities=29% Similarity=0.377 Sum_probs=47.9
Q ss_pred HHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 585 ~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
++++-.+-|+++|-||||++. ..+.++++.+.|+.|-. +.++-+|-|.+.+-+.+.+|.
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~ 63 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGD 63 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhch
Confidence 345556679999999999984 35567899999999765 789999999999988888854
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.12 Score=50.56 Aligned_cols=52 Identities=10% Similarity=0.100 Sum_probs=38.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+++|||.||||....+... ......+.+.+.++|+.|.+. .-.++|+|+.+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~------~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVH------EIDNFEFIDGVIDALRELKKM-GYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCC------CHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 6899999999994322110 014566788999999999864 568999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.25 Score=52.38 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=43.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.++++||+||||....... ..-+|.+.++|++|.+. ...++|+|+.++...+..+....
T Consensus 128 ~~~i~~D~D~TL~~~~~~v-----------~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~Le~lg 186 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPV-----------RIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSLKETK 186 (303)
T ss_pred ccEEEEecCCCccCCCCcc-----------ccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHcC
Confidence 5899999999999763211 11147999999999984 56788999887777777666544
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.19 Score=48.68 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=37.8
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
+++|||.||||....+ +....+.+ ...++-+.+.+.|+.|.+. .-.++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~--~~~~~~~~-~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP--SDFQVDAL-EKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCC--CccccCCH-HHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 6799999999987432 11112222 3457789999999999874 4688999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.24 Score=51.40 Aligned_cols=53 Identities=9% Similarity=0.192 Sum_probs=40.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~~ 660 (673)
++|+||.||||.... . +.++..++|+.|.+. ...|+++|| |+...+.+.+...
T Consensus 2 ~~~~~D~DGtl~~~~-------------~--~i~~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK-------------E--RIPEAETFVHELQKR-DIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CEEEEeCCCceEcCC-------------e--eCcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 579999999998631 1 234788999999875 567888884 8898888777654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.26 Score=47.18 Aligned_cols=62 Identities=16% Similarity=0.354 Sum_probs=39.4
Q ss_pred eEEEEcccccccCCC---CCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPV---DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~---~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++|||.||||.... ... .+..... ...+. .+|+.|.+. ...++|+||+....++..+....
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~---~~~~~~~--~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~~~g 66 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNN---GEEIKAF--NVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCKTLG 66 (154)
T ss_pred eEEEEeCceeEEcCeEEECCC---CcEEEEE--echhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHHHcC
Confidence 689999999999721 111 1111110 11112 267888654 57999999999988888776654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.15 E-value=27 Score=38.25 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=49.0
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc----hhhcc--CceEEECCC--CHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSLG--AGAILVNPW--NIT 515 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~----~~~lg--~~gllVnP~--D~~ 515 (673)
+.+.++.. +++..||++| .+-|+ -+..|++++| .|+|+--..+- +..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 45667655 5688899999 34554 6779999995 77766655541 22221 235555554 789
Q ss_pred HHHHHHHHHhc
Q 005855 516 EVANAIARALN 526 (673)
Q Consensus 516 ~lA~aI~~aL~ 526 (673)
+++++|.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=91.08 E-value=8 Score=42.41 Aligned_cols=100 Identities=11% Similarity=0.062 Sum_probs=62.2
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhh----c--cCceEEECC--CCHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----L--GAGAILVNP--WNIT 515 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~----l--g~~gllVnP--~D~~ 515 (673)
+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--.. + ...|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 35677764 5688999988654 555 679999995 77777544432211 2 123566654 4689
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhHHHhh-CCHHHHHHHHH
Q 005855 516 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (673)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (673)
+++++|.++|+.+ +.+++.+++.+.+.. ......++.+.
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i~ 387 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEIE 387 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999864 344444555444443 34555555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.22 Score=51.88 Aligned_cols=49 Identities=8% Similarity=0.121 Sum_probs=36.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
++|+||.||||...... .-.+.+...++|++|.+. ...++++|||+...
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 57999999999864210 012567999999998875 67899999876653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.65 Score=47.99 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=46.1
Q ss_pred chHHHHHHHhhccCeEEEEcccccccCCCCC--CCCC---Cc--------ccc-------ccccCCChhHHHHHHHHhcC
Q 005855 578 READSIERYLRSNNRLLILGFNATLTEPVDT--PGRR---GD--------QIR-------EMELKLHPDLKQPLNALCHD 637 (673)
Q Consensus 578 ~~~~~~~~y~~s~~rll~lDyDGTL~~~~~~--p~~~---~~--------~~~-------~~~~~p~~~~~~~L~~L~~d 637 (673)
.++++.++..-.+...++||+||||+...+. -|.. .. ... .....|.+.+.++|+.|.+.
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~ 129 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHC
Confidence 5666666666666669999999999976541 1100 00 000 02235556699999999874
Q ss_pred CCCeEEEEcCC
Q 005855 638 PKTTIVVLSGS 648 (673)
Q Consensus 638 ~~n~V~ViSGR 648 (673)
.-+++|||+|
T Consensus 130 -G~~i~iVTnr 139 (237)
T TIGR01672 130 -GDAIFFVTGR 139 (237)
T ss_pred -CCEEEEEeCC
Confidence 5689999999
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=90.63 E-value=2.1 Score=45.16 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=60.8
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
+++++..|-.|+.+.....++|+..+. +++ .+.+|.++.. +.++ ++++++.. + + .+.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~---~-----~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNLD----ELKKFAKE-Y---P-----NII 227 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCHH----HHHHHHHh-C---C-----CEE
Confidence 578999999999887777888886542 222 2333443332 2223 34444332 1 1 233
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe 494 (673)
. .+ ..+++..+|+.||+++.+ -|.++.|+++++ .|.|+-.
T Consensus 228 ~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i~ 267 (279)
T TIGR03590 228 L-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAIC 267 (279)
T ss_pred E-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEEE
Confidence 2 23 346899999999999984 458999999995 5655443
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.37 E-value=5.2 Score=42.84 Aligned_cols=124 Identities=18% Similarity=0.164 Sum_probs=81.8
Q ss_pred ceEEEee-cccccCChHHHHHHHHHHHHhCcCccCceEEEEE-EcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI-AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 364 ~iIl~Vg-RLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqv-g~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
++-+-|| .=|++-.+.+.|+++.+.+.. ++.+++. +.|+ ++ . ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn-~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN-Q---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC-H---HHHHHHHHHHHH---hcCcc---cE
Confidence 3444444 468999999999998877543 3434332 3332 12 3 446666666554 45532 35
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEE
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllV 509 (673)
..++..++.+|+.++++.||+.++.-- .+|+|..++=. .. +.|+++|.-.-.-..+.+.|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999999876 49999887542 23 47888887666655553445444
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.26 Score=48.56 Aligned_cols=64 Identities=13% Similarity=0.331 Sum_probs=39.1
Q ss_pred cCeEEEEcccccccCC---CCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEP---VDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~---~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.-++|++|+||||+.. ....+ ..+..... .=...++.|.+ ....|+|+||+.....+..+....
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~---~~~~~~~~----~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNG---EELKAFNV----RDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCC---CEEEEEec----cchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcC
Confidence 4689999999999974 11111 01110101 00134555554 457899999999988888776654
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.27 Score=51.12 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=36.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
++|+||.||||... ..+.+...+.|+.|.+. .-.++++|+|+...
T Consensus 2 ~~v~~DlDGtL~~~---------------~~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~ 46 (248)
T PRK10444 2 KNVICDIDGVLMHD---------------NVAVPGAAEFLHRILDK-GLPLVLLTNYPSQT 46 (248)
T ss_pred cEEEEeCCCceEeC---------------CeeCccHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 47999999999853 13567899999999875 57899999998743
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=90.25 E-value=0.68 Score=45.09 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=41.1
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC-HHhHHHHhc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKVLD 658 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~-~~~L~~~~~ 658 (673)
.-+++++|+||||+... ...+.+.+.+.|+.|.+. .-.++|+|+.+ ....+.++.
T Consensus 24 ~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~~~~~~~~~~~ 79 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKAA-GRKLLIVSNNAGEQRAKAVEK 79 (170)
T ss_pred CCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHH
Confidence 45889999999999752 235668999999999764 46899999988 454444433
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.52 Score=45.26 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=40.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLF 662 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~ 662 (673)
=+|+++|.||||+.-.-.-+.-+..++.-...---. +..|.++ .-+|+|||||+..-+++...+...
T Consensus 8 IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~G-ik~l~~~----Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 8 IKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHG-IKLLLKS----GIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred ceEEEEeccceeecCeEEEcCCCceeeeeeccCcHH-HHHHHHc----CCeEEEEeCCCCHHHHHHHHHcCC
Confidence 489999999999974211111122222111222222 2333332 469999999999999998877653
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.71 Score=45.13 Aligned_cols=59 Identities=29% Similarity=0.403 Sum_probs=44.4
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCC-CCeEEEEcCCC----------HHhHHH
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP-KTTIVVLSGSD----------RNVLDK 655 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~-~n~V~ViSGR~----------~~~L~~ 655 (673)
++..=+.++||.|.||+++. ...+++++.+.++++.+.- ...|+|+|... .+.+++
T Consensus 37 k~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~ 103 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEK 103 (168)
T ss_pred hhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHH
Confidence 44556899999999999863 4456789999999998753 34799999873 345666
Q ss_pred Hhc
Q 005855 656 VLD 658 (673)
Q Consensus 656 ~~~ 658 (673)
-++
T Consensus 104 ~lg 106 (168)
T PF09419_consen 104 ALG 106 (168)
T ss_pred hhC
Confidence 665
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.56 Score=44.36 Aligned_cols=52 Identities=19% Similarity=0.197 Sum_probs=37.4
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
++|||.||||+...... ..+.. ....+.+++.++|+.|.+. .-.++|+|+.+
T Consensus 2 ~~~~d~dgtl~~~~~~~---~~~~~-~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSD---YPRSL-DDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcc---cCCCH-HHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 68999999999763211 11111 2346789999999999875 56889999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.79 E-value=0.49 Score=46.06 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=36.5
Q ss_pred CeEEEEcccccccCCCC-CCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~-~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.++++||.||||..... .+ .-+.++.-..+.+++.++|+.|-+. .-.++|+|..+.
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~---~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~~ 69 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKV---FPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQSG 69 (166)
T ss_pred CcEEEEeCCCceEecCCCCc---ccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 57899999999996421 00 0011111223568999999999764 578899997554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=88.82 E-value=0.49 Score=46.21 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=38.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
=|+||||-||||.+...... .....+.+++.+.|+.|.+. .-.++|+|+.+
T Consensus 4 ~~~~~~d~d~~~~~~~~~~~-------~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~ 54 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIHY-------PGSFTLFPFTKASLQKLKAN-HIKIFSFTNQP 54 (173)
T ss_pred CcEEEEeCCCcccCCCCCCC-------HHHeEECCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 37899999999987632110 03456789999999999764 57899999876
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.76 E-value=2.2 Score=46.54 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=80.4
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCC---CcCC---ChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSL---RDGM---NLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl---~EGf---~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~ 514 (673)
+.++....+.......++.-|+.+.=+. -++. +.-+.|+++|+ |++|.+-..+.-..++.+--++--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 4444334445777888888888775443 2333 88899999995 777777666666556544334445799
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHH
Q 005855 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (673)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 561 (673)
.++.+.+..++.-+. ||++..+.+.+.| ..|+-..=+.+++..+..
T Consensus 315 kdl~~~~~yll~h~~-erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 315 KDLKEKLKYLLNHPD-ERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHHHHHHHHhcCcc-hHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 999999999998754 8888888887776 456656656666666654
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.53 E-value=0.43 Score=51.22 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=34.8
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
-++|+||.||||.... .+.+...++|+.|.+. .-.++++|+++.
T Consensus 28 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~~-g~~~~~~TN~~~ 71 (311)
T PLN02645 28 VETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRSM-GKKLVFVTNNST 71 (311)
T ss_pred CCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 3689999999998631 2446789999998875 568999999983
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.49 E-value=0.56 Score=51.31 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=39.3
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
+++++|||.||||+...... ...+.. ....|.|++.+.|..|-+ ..-.++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863211 111111 356788999999999964 35689999985
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=88.21 E-value=1.2 Score=42.17 Aligned_cols=69 Identities=23% Similarity=0.274 Sum_probs=48.3
Q ss_pred CeEEEEcccccccCCCC--CCCC-CCcc---------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 591 NRLLILGFNATLTEPVD--TPGR-RGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~--~p~~-~~~~---------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
+.+++||.||||..... .++. ...+ .......+-|.+.+.|+.|.. .-.++|+|+..++..+..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHHH
Confidence 56799999999998642 1111 1101 111334667899999999974 47999999999998888776
Q ss_pred ccc
Q 005855 659 LVL 661 (673)
Q Consensus 659 ~~~ 661 (673)
...
T Consensus 80 ~l~ 82 (148)
T smart00577 80 LLD 82 (148)
T ss_pred HhC
Confidence 543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=88.20 E-value=0.44 Score=50.16 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=32.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
++|++|.||||.... .+.+++.++|+.|-+. ...++++||++
T Consensus 3 ~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~~-g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE---------------RVVPGAPELLDRLARA-GKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHHC-CCeEEEEeCCC
Confidence 579999999997631 2345688889999864 56899999965
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=87.81 E-value=0.84 Score=44.64 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=38.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
.+++|||.||||.-... .+.... ....|.+++.+.|+.|.+. .-.++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~---~~~~~~--~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD---GYVKSP--DEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCc---cccCCH--HHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 36899999999965421 122222 2356789999999999874 57899999876
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=87.77 E-value=0.81 Score=51.20 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=36.2
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccccccccCCC-hhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHH
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLH-PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKV 656 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~-~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~ 656 (673)
..+.+.+|+.|+||||.+..+ + ...+ .+....++++.+ ..-.++++|||+.....+.
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~~-~-----------~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l 62 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHHD-P-----------ENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKEL 62 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCCC-c-----------cchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHH
Confidence 455678899999999996421 1 1233 344444466555 3456779999996555444
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=87.74 E-value=0.71 Score=44.66 Aligned_cols=54 Identities=15% Similarity=0.263 Sum_probs=31.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
.+.+||+||||..... +....+.+..-...++.+.+.|++|.++ .-.++|+|..
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEeCc
Confidence 3689999999986422 1111111112233456799999999776 5789999844
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.72 E-value=47 Score=36.35 Aligned_cols=33 Identities=12% Similarity=0.090 Sum_probs=27.1
Q ss_pred HHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC
Q 005855 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (673)
Q Consensus 453 l~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe 494 (673)
...+|+.||+++..| |.+.+|++.++ .|.|+.-
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g----~P~Vv~Y 261 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIG----TPFVLAY 261 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhC----CCEEEEE
Confidence 457899999999998 78899999995 6666643
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=87.37 E-value=1.2 Score=47.15 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=47.1
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
+..++++|.||||....... -..-.......+.+.+.+.|+.|.+. ...++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHHHH
Confidence 45789999999999764310 00011112457889999999999874 678999999999866655543
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.09 E-value=2.3 Score=41.30 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=51.0
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccccceeec
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVLFIFFSG 667 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~~~~~~~ 667 (673)
+..-+-+++|+|.||+|+.. ...+|++++-+..|..- .-.|+|+|.-+..-...+......-++++
T Consensus 25 ~~Gikgvi~DlDNTLv~wd~-------------~~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~~~l~v~fi~~ 90 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWDN-------------PDATPELRAWLAELKEA-GIKVVVVSNNKESRVARAAEKLGVPFIYR 90 (175)
T ss_pred HcCCcEEEEeccCceecccC-------------CCCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhhhhcCCceeec
Confidence 34457799999999999843 34578999999998874 56899999988888888887655445544
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=87.01 E-value=0.55 Score=47.43 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=31.9
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.|.+.+.|+.|.+ ....++|+||.....++.++...
T Consensus 73 ~~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 73 AEIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CCcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 4678899999999865 36789999999998888877653
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.54 E-value=57 Score=36.08 Aligned_cols=136 Identities=18% Similarity=0.243 Sum_probs=85.9
Q ss_pred CceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~-KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+.+++..-|-... +++...+.|+.++++++|+.. ++ . |.-.. +.. ++.+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi-y--p~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI-Y--PVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE-E--eCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 4566677887666 999999999999999998753 22 2 32111 222 2222 1112221 134
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCce-EEEeCCCCchhhccCc-eEEECCCCHHHHHH
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG-AILVNPWNITEVAN 519 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~-lVlSe~aG~~~~lg~~-gllVnP~D~~~lA~ 519 (673)
+ +..++...+...|+..|-+.+--| |=.--||-.-+ .| +++=+.+--.+-+..+ -++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 4 456889999999999997766555 33456877763 33 4444544444444223 35555 57899999
Q ss_pred HHHHHhcCCH
Q 005855 520 AIARALNMSP 529 (673)
Q Consensus 520 aI~~aL~m~~ 529 (673)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998764
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.68 E-value=2.2 Score=44.13 Aligned_cols=71 Identities=7% Similarity=-0.045 Sum_probs=45.3
Q ss_pred chHHHHHHHhhccCeEEEEcccccccCCCC---CCCC-C-Cc---cc------------cccccCCChhHHHHHHHHhcC
Q 005855 578 READSIERYLRSNNRLLILGFNATLTEPVD---TPGR-R-GD---QI------------REMELKLHPDLKQPLNALCHD 637 (673)
Q Consensus 578 ~~~~~~~~y~~s~~rll~lDyDGTL~~~~~---~p~~-~-~~---~~------------~~~~~~p~~~~~~~L~~L~~d 637 (673)
.++++.++-.-.+...+.||.|||+....+ .+.. + .+ .+ ....+.|.+.++++|+.|-+.
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~ 129 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKR 129 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHC
Confidence 455555555433455899999999995322 1100 0 00 00 012467788899999999764
Q ss_pred CCCeEEEEcCCC
Q 005855 638 PKTTIVVLSGSD 649 (673)
Q Consensus 638 ~~n~V~ViSGR~ 649 (673)
...+++||||+
T Consensus 130 -G~~I~iVTnR~ 140 (237)
T PRK11009 130 -GDSIYFITGRT 140 (237)
T ss_pred -CCeEEEEeCCC
Confidence 67999999996
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=85.38 E-value=84 Score=36.97 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=26.8
Q ss_pred HHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe
Q 005855 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 493 (673)
Q Consensus 454 ~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS 493 (673)
..++++||+++.+| |.+.+|++.++ .|.|+.
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~ 513 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVT 513 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEE
Confidence 68999999999999 79999999995 666654
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=85.29 E-value=46 Score=39.77 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=87.6
Q ss_pred CCceEEEeecccccCChHHH-H---HHHHHHHHhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQK-L---LAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~-L---~Af~~ll~~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~ 436 (673)
+.-+++++-|+..-|-.... | .-+.+++ +.|+.. ..+++|..|....++. .-+++-+.|.+++..||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~-~gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDY-MGKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-H-HHHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHHhcChhhc
Confidence 45577899999998977663 3 3445544 455432 2466665554433332 22456667777777777531111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC--cCCChhHHHHHhhccCCCceEEEeCCCCchhhc----c-CceEEE
Q 005855 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 509 (673)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~--EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g-~~gllV 509 (673)
+...|+|+. ..+-.--..++.+|||-+.+|++ |.-|..-+=||.- |++.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 223578765 44556666789999999999984 9999998888875 889999999997665 5 567777
Q ss_pred CCCCHHHHHH
Q 005855 510 NPWNITEVAN 519 (673)
Q Consensus 510 nP~D~~~lA~ 519 (673)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 4 45666544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=84.63 E-value=0.78 Score=40.83 Aligned_cols=49 Identities=20% Similarity=0.317 Sum_probs=33.6
Q ss_pred EEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC---HHhHHHHhc
Q 005855 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKVLD 658 (673)
Q Consensus 594 l~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~---~~~L~~~~~ 658 (673)
|+||.||||... ..|-|...++|+.|.+. .-.++++|..+ ++.+.+.+.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~~~L~ 52 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYAKKLK 52 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHHHHHH
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHH
Confidence 689999999852 23557889999999886 45677877654 445554443
|
... |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=84.52 E-value=29 Score=41.98 Aligned_cols=150 Identities=11% Similarity=0.131 Sum_probs=100.4
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHH--HhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++++=|+..-|-... +|..++++. ..+|+.. ..+++|..|....++. .-+.+-+.|.+++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766653 3456421 2466776665554443 334666777888887775211122
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVn 510 (673)
...|+|+.. .+-.--..++.+|||...+|. .|.=|..-+=||.- |++-+|..-|+..++ ++|++.+-
T Consensus 621 ~lkVVFlen-Y~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIPN-YSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeCC-CCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 335887653 344555678999999999997 47777777777764 889999999987665 36788885
Q ss_pred CCCHHHHHH
Q 005855 511 PWNITEVAN 519 (673)
Q Consensus 511 P~D~~~lA~ 519 (673)
. +.+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 4 5666554
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.47 E-value=0.72 Score=45.70 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=31.5
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.|++.+.|+.|.+. ..++|+|+.....++..+....
T Consensus 67 ~~~~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER--FQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred CCCCCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHHHHcC
Confidence 45678899999999874 6899999999998888766543
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.07 E-value=51 Score=39.59 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=92.6
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCc-CccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P-~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
+..+++++=|+..-|-....+.=..++...-- ++..+|.++..|....++. .-.++.+.+...+..||.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhccc------ce
Confidence 46688899999988877766665555544332 4555676665554443343 2346677788888888753 25
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCC--cCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEECC
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNP 511 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~--EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP 511 (673)
|+|+..+ +-.--..++.+|||-..+|++ |.=|..-+=||.- |++-+|..-|+--++ |.||+++-.
T Consensus 559 VvFl~nY-dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alN-----GaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLPNY-DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALN-----GALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeCCC-ChhHHHhhcccccccccCCCCCccccCcCcchHHhc-----CCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 7777543 334445678999999999874 6666665555553 889999999988665 478898854
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=83.03 E-value=58 Score=37.76 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=78.1
Q ss_pred EEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeC
Q 005855 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (673)
Q Consensus 366 Il~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~ 445 (673)
++|..=-.+.|=.++.+.-.-++++.-|+- +|++.+++ +. .+..+.+++++++-+ . +...++| .
T Consensus 431 vVf~c~~n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~G----v-~~eRL~f-~ 494 (620)
T COG3914 431 VVFCCFNNYFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAEREG----V-DSERLRF-L 494 (620)
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHcC----C-Chhheee-c
Confidence 333333457788999999999999999974 36666643 12 245666777776633 2 3345665 5
Q ss_pred CCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCC
Q 005855 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (673)
Q Consensus 446 ~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~a 496 (673)
...+.++..+-|+.||+++-|=-|-| ..++.|++-. |++|++-.+
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 67788899999999999999877766 5788999998 677777544
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=82.79 E-value=2.1 Score=49.28 Aligned_cols=60 Identities=12% Similarity=0.215 Sum_probs=39.6
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+.+.+++|||.||||..... +......+..-..+.+.+.+.|+.|.++ .-.++|+|..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~s--g~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKS--GKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCC--CccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 34578999999999996421 1000001111223578999999999875 568899998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.27 E-value=2.3 Score=43.08 Aligned_cols=51 Identities=14% Similarity=0.106 Sum_probs=34.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVL 657 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~ 657 (673)
.+|||+|.||||.|....+ .|-..++.-|. |....|+..|..++.++...-
T Consensus 7 ~~lIFtDlD~TLl~~~ye~------------~pA~pv~~el~----d~G~~Vi~~SSKT~aE~~~l~ 57 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEW------------QPAAPVLLELK----DAGVPVILCSSKTRAEMLYLQ 57 (274)
T ss_pred ceEEEEcccCcccCCCCCC------------CccchHHHHHH----HcCCeEEEeccchHHHHHHHH
Confidence 4799999999999954333 23333433333 336789999999998665443
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=82.25 E-value=1.3 Score=44.66 Aligned_cols=38 Identities=21% Similarity=0.403 Sum_probs=30.3
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+++.++|+.|.+. ...++|+||.....++..+...
T Consensus 84 ~l~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 84 RLSPGIPELVKKLRAR-GTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CCCccHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHh
Confidence 4568999999999764 5689999999998888766653
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=82.21 E-value=2.9 Score=40.30 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=50.2
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCcc-------------------c--cccccCCChhHHHHHHHHhcCCCCeEEEEc
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ-------------------I--REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~-------------------~--~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS 646 (673)
+.++..++||.|.||+.....|...... . .....++-|.+.+.|+.|+. .-.++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3567779999999999866554311100 0 01224556899999999995 48999999
Q ss_pred CCCHHhHHHHhcccc
Q 005855 647 GSDRNVLDKVLDLVL 661 (673)
Q Consensus 647 GR~~~~L~~~~~~~~ 661 (673)
...+.-.+..+..+.
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999987777666554
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=80.32 E-value=2.6 Score=43.33 Aligned_cols=46 Identities=20% Similarity=0.290 Sum_probs=35.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
-++++||.||||... ..|.|.+.++|+.|.+. .-.++|+|+.++..
T Consensus 8 ~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~~-G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEecccccccC---------------CccCccHHHHHHHHHHC-CCEEEEEeCCCCCh
Confidence 357999999999853 23568999999999874 45788887766643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 673 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 4e-66 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 5e-66 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-64 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 1e-15 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 1e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 8e-15 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 688 bits (1779), Expect = 0.0
Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 22/495 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ K
Sbjct: 3 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLK 54
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ K L E + +YYN + N +LWP FHY RL + + +
Sbjct: 55 KVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 105
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 106 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 165
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 225
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 226 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 344
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 345 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 403
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
++ EVA A+ RAL MS ER RH + + W E F+S+L V + +
Sbjct: 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQ 463
Query: 572 QVPPSLREADSIERY 586
+ + ++E +
Sbjct: 464 RDKVATFPKLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 652 bits (1684), Expect = 0.0
Identities = 107/500 (21%), Positives = 187/500 (37%), Gaps = 28/500 (5%)
Query: 92 SRQRLLVVANRLPVSAIRRGED-SWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV--- 146
+ + + + R ++ ++ GG + + WI A
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRR 60
Query: 147 PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ +T L R I V L D + N N++W +Y + + +
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSF 119
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261
+ +A + + + FAD + K V HDY L+ +P L+E D + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 262 LHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVSACTRILG---FEGTP 316
+H P+PS++ R LP R+ +L +L A +GF + R+F+ + +L +
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREA 239
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
VE +G TR+ P+G + ++E G ++++ R D IK
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLPEGIEEWADGHRLVVHSGRTDPIK 294
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
+ + AF L K +L P R VP +V V N G+
Sbjct: 295 NAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS- 351
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
+D D A + D+ + S DG NL ++E + + +ILSE
Sbjct: 352 ---DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-RDADVILSETC 407
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAA+ LG VNP+++ E A AI+ AL P +R + T + W + +
Sbjct: 408 GAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQL 467
Query: 557 SELNDTVVEAQLRIKQVPPS 576
L ++ +
Sbjct: 468 DGLAADHAARTATAERFDTA 487
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.2 bits (163), Expect = 1e-11
Identities = 72/484 (14%), Positives = 142/484 (29%), Gaps = 163/484 (33%)
Query: 2 PGNSYNSNSSNIP------PDRVTRLVREKIERDLRKSSRASHPN------DVTDNGGRE 49
S + +SSNI + RL++ K + N +V +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN 260
Query: 50 VFEDEQRL----RDG---DNLGPSI---VDEDLEGPASTPNEGCERLDGRTFSRQRLLVV 99
F ++ R D L + + D TP+E + L + L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV-KSL----LLKY-LDCR 314
Query: 100 ANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKAL 159
LP + +S +++ + ++ A W W VN LT +
Sbjct: 315 PQDLPREVLTTN----PRRLS---IIAESI--RDGLATWDNWKHVNC------DKLTTII 359
Query: 160 AEKRCIPVFLDEDIVHQYYNG--------------YCNNILWPLFHYLGLPQEDRLATTR 205
+ + V L+ + ++ ++W + + D
Sbjct: 360 --ESSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSD----VM 405
Query: 206 SFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP 265
++ Y +V K K+ + +L K EY
Sbjct: 406 VVVNKLHKY--------SLVEKQPKES-TISIPSIYLELKVKLENEY------------- 443
Query: 266 FPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY-----ARHFVSACTRILGFEGTPEGVE 320
+HR++ ++ + + DL+ + Y H +
Sbjct: 444 ----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--------------- 484
Query: 321 DQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIK-- 376
+ R+ F + +D RF+ K ++ A ++ L +
Sbjct: 485 EHPE--RMTLFRMVFLDF-RFLEQ----------KIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 377 -------GIPQKLL-AFEKFL---EENSDWRGKVV-LLQIAVPTRTDVPEYQRLTSQVHE 424
++L+ A FL EEN K LL+IA+ + E + + + H+
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRIAL-----MAEDEAIFEEAHK 585
Query: 425 IVGR 428
V R
Sbjct: 586 QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 93/617 (15%), Positives = 165/617 (26%), Gaps = 250/617 (40%)
Query: 6 YNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDGDNLGP 65
YN N V+RL + + LR++ LR N+
Sbjct: 120 YNDNQV-FAKYNVSRL--QPYLK-LRQAL--------------------LELRPAKNVL- 154
Query: 66 SIVDEDLEGPASTPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLV 125
++G G G+T VA + +
Sbjct: 155 ------IDGVL-----GS----GKT-------WVA----LDVCLSYK------------- 175
Query: 126 SALLGVKEFEARWIGWAGVNVPDEI-------------------------------GQKA 154
+ +F+ W+ N P+ + Q
Sbjct: 176 --VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 155 LTKALAEK---RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQED---R-LATTRSF 207
L + L K C+ V L ++ N W F + + L TTR
Sbjct: 234 LRRLLKSKPYENCLLV-LL-NV--------QNAKAWNAF--------NLSCKILLTTR-- 273
Query: 208 QSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP 267
Q ++ A + H+ D L K L D+ P
Sbjct: 274 FKQVTDFLSAATTT-HISLDHHSMT---LTPDEVKSLLLKYLDCRPQDL--------P-- 319
Query: 268 SSEIHRTLPSRSDLLRAVLAADL-VGFHTYDYARHF--------VSACTRILGFEGTPEG 318
E+ T P +++A + G T+D +H + + +L P
Sbjct: 320 -REVLTTNP----RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL----EPA- 369
Query: 319 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378
E + + F L + P HI + L + D+IK
Sbjct: 370 -EYR---------------KMF-DRLSVFPPSAHIPT--------IL-LSLIWFDVIKSD 403
Query: 379 PQKLLA-FEKF--LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVH-EIVGRINGR-- 432
++ K+ +E+ + + I + + + L H IV N
Sbjct: 404 VMVVVNKLHKYSLVEKQPK-ESTISIPSIYLELKVKLENEYAL----HRSIVDHYNIPKT 458
Query: 433 --FGTLTAVPI---------HHLDRS-------------LDF-----------PALCALY 457
L + HHL LDF A A
Sbjct: 459 FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518
Query: 458 AVTDVALVTSLRDGMNLVSYE-FVACQDLKKGVLI--LSEFAGAAQSLGAGAILVNPWNI 514
++ + L+ L Y+ ++ D K L+ + +F L+
Sbjct: 519 SILNT-----LQQ---LKFYKPYICDNDPKYERLVNAILDF-----LPKIEENLIC---- 561
Query: 515 TEVANAIARALNMSPEE 531
++ + + AL M+ +E
Sbjct: 562 SKYTDLLRIAL-MAEDE 577
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 4e-06
Identities = 60/446 (13%), Positives = 129/446 (28%), Gaps = 116/446 (26%)
Query: 218 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMK-VGWFLHTPFPSSEIHRTLP 276
+ M + Y+ D++ +F + + D K V + EI +
Sbjct: 5 HHMDFETGEHQYQYKDIL------SVFEDAFVDNF--DCKDVQDMPKSILSKEEIDHIIM 56
Query: 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-LGFEGTPEGVEDQGRLTRVAAF---- 331
S+ + + + + + FV RI F +P E + +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 332 -PIGIDSERFI-----RALEINPVQVHIKELQETFAGRKVML-GVDRLDMIKGIPQKLLA 384
+ D++ F R ++ + EL+ + V++ G + G + +A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP---AKNVLIDG-----V-LGSGKTWVA 167
Query: 385 FE-----KFLEENSD---W-------RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429
+ K + W + VL + P + + I RI
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 430 N---GRFGTLTAVPIHH-----LD--------RSLDFPALCALYAVTDVALVT----SLR 469
+ L + L + + C + L+T +
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKI-------LLTTRFKQVT 278
Query: 470 DGMNLVSYEFVACQDLKKGVL------ILSEFAG-AAQSLGAGAILVNPWNITEVANAIA 522
D ++ + ++ + +L ++ Q L + NP
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----------- 327
Query: 523 RALNMSPEE-REKR-HWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREA 580
R L++ E R+ W N+ HV E+ ++ L P R
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-------------PAEYR-- 372
Query: 581 DSIERYLRSNNRLLILGFNATLTEPV 606
+ + +RL + +A + +
Sbjct: 373 ---KMF----DRLSVFPPSAHIPTIL 391
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 205 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 264
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 8e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 260
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 261 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 318
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 319 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 362
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 420
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 479
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 480 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 536
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 537 W 537
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 295 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 355 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 413
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 414 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 473
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 474 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 532 REKRHWHNFTHVTTHTAQEWAETF 555
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 444
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 503
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 504 AG--AILVNPWNITEVANAIARALNMSPEEREK 534
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 194 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 242
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 243 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 363 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 415
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 416 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 472
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 529
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 530 EERE-------KRHWHNFT 541
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)
Query: 258 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 313
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 314 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 431
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 432 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 489
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 490 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546
++ + G A + G ++ P++ ++ + +AL R + + T
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQ 355
Query: 547 TAQEWAE 553
E
Sbjct: 356 DLYSLPE 362
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 673 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.96 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.95 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.94 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.94 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.94 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.94 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.94 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.93 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.93 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.93 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.93 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.93 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.92 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.89 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.89 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.89 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.84 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.83 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.8 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.79 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.79 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.74 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.69 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.67 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.65 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.64 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.47 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.41 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.04 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.88 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.64 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.62 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.6 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.59 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 98.44 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 98.42 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.26 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 98.09 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.95 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.95 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.8 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.73 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.68 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.57 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 97.46 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.41 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 97.3 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 97.22 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 97.2 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.17 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.13 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.08 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.05 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.02 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.01 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.0 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 96.99 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 96.95 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 96.95 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.9 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 96.84 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 96.79 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 96.77 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.73 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 96.66 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 96.58 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.53 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 96.49 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 96.49 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.48 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 96.44 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.36 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 96.26 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.24 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.21 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 95.91 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 95.85 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 95.64 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 95.52 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 95.38 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.16 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 94.97 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 94.96 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 94.82 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 94.6 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 94.53 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.51 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.42 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.21 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 94.05 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.6 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 93.58 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 92.91 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 92.78 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 92.64 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 92.4 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.38 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 92.1 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 91.76 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 91.46 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 91.3 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 91.1 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 91.05 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 90.97 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 90.59 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 89.95 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 89.05 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 88.85 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 88.51 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 87.94 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 87.79 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 87.07 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 86.88 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 86.66 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 86.59 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 86.52 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 86.05 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 85.24 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 84.43 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 84.41 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 84.35 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 83.87 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 83.24 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 83.15 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.01 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 81.88 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.72 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 81.72 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 81.47 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 81.23 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 80.51 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-106 Score=897.18 Aligned_cols=453 Identities=23% Similarity=0.313 Sum_probs=403.6
Q ss_pred CCcEEEEEcCCCcceEec-CCCcE---EEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 005855 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (673)
Q Consensus 93 ~~rlivvsnrlP~~~~~~-~~g~~---~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~----------~ 158 (673)
.++||||||||||.++++ ++|+| .++.++||||+||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999988 68887 67889999999999987 899999998532 1222221 2
Q ss_pred hcCceEEEEecChHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhc--CCCCEE
Q 005855 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (673)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~--~~~DvV 235 (673)
..+++|+||+|+++++++||+||||++|||+|||+.+.+. .+. ...|+ ++|++|++||++||++|++.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~-~p~-~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWT-QPS-FGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSS-CCC-BCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCC-CCc-cchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 4679999999999999999999999999999999843220 000 12344 569999999999999999999 589999
Q ss_pred EEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCC--cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh-cc
Q 005855 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (673)
Q Consensus 236 wvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp--~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l-~~ 312 (673)
|||||||+++|++||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+++|++++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred ccC--CCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 313 EGT--PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 313 ~~~--~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
+.. ...++++|+.++|.++|+|||++.|.+... ++ .++++++++++++|++|||||+.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 653 457899999999999999999999987643 11 145777888999999999999999999999999 9999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCc
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (673)
++|+++ +++|||||.|+++++++|+++++++++++++||++||+. ||+|+ +.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 78865 6889999999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHH
Q 005855 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (673)
Q Consensus 471 Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (673)
|||||++|||||+ +++||+|+|+++|++++++.+|++|||+|++++|+||.++|+|+++||++|+++++++|++||+..
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 467999999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHH
Q 005855 551 WAETFVSELNDTVVE 565 (673)
Q Consensus 551 W~~~fl~~L~~~~~~ 565 (673)
|+++||++|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-93 Score=796.30 Aligned_cols=449 Identities=35% Similarity=0.625 Sum_probs=406.9
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 005855 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (673)
Q Consensus 94 ~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (673)
+||||||||+|+.. + .+.++|||++||.++ +..+++||||+|.. +++ ++...+....+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~----~~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~~-~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E----HAASAGGLAVGILGALKAAGGLWFGWSGET-GNE-DQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SCC-SSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----C----CCcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Ccc-cchhhhhccCCceEEEEECCHH
Confidence 68999999999972 1 146899999999998 77899999999965 221 1111112246899999999999
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (673)
++++||+||||++|||+|||..... .|+ .+|.+|.++|+.||+++.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999985322 366 5599999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEE
Q 005855 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (673)
Q Consensus 252 ~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~v 330 (673)
+.++++|+||+|+|||++++|+++|++++++++++++|+|+||++.|+++|+++|+++++.+... ..++++|+..+|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876543 34778899999999
Q ss_pred eecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
+|+|||++.|.+....+++.+ .++++++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999987655555544 6678888889999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhcc-CCCce
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~-~~~g~ 489 (673)
++++|+++++++++++++||.+||..+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999983 45689
Q ss_pred EEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|+++++++++++++||++.|+++|++.|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-28 Score=261.60 Aligned_cols=314 Identities=19% Similarity=0.198 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch---hhhh--------cCC
Q 005855 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~---~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~---e~fr--------~lp 276 (673)
+..+....+.....+... -...|+||+|+++..+++.++++. .+.++.+.+|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 334444444444444444 346799999999998888888744 6789999999987531 1111 111
Q ss_pred cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHH
Q 005855 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (673)
Q Consensus 277 ~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l 356 (673)
........+..+|.|.+.+..+++.... .++.. ..++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~-----------~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF-----------EGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG-----------TTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc-----------CCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123344566899999999877766221 22111 34788999999999998763322233445566
Q ss_pred HHHh--cCCceEEEeeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcc
Q 005855 357 QETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (673)
Q Consensus 357 r~~~--~~~~iIl~VgRLd-~~KGi~~~L~Af~~ll~~~--P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~ 431 (673)
++++ .++++|+++||+. +.||+..+++|++.+.+++ |+ +.|+++|.+. . .+.+.+++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~----~---~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----P---ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCCC----H---HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCCC----h---hHHHHHHHHHhhcC-
Confidence 6666 3448999999999 9999999999999998765 54 5688887421 2 23455666665533
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-cCceEEEC
Q 005855 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (673)
Q Consensus 432 ~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-g~~gllVn 510 (673)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25667899999999999999999999999999999999999995 999999999999888 44899999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHH
Q 005855 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 511 P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~ 564 (673)
|.|++++|++|.+++++.++.+.++.+++++++++++++.+++++++.++++.+
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999955567888888999999999999999999998887543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=262.97 Aligned_cols=298 Identities=17% Similarity=0.189 Sum_probs=206.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhhC------CCCeEEeEeccCCCc----hhhhhc--CCc--------------------
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFPS----SEIHRT--LPS-------------------- 277 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~------~~~~Ig~flH~PfP~----~e~fr~--lp~-------------------- 277 (673)
.++||+|+||||..++|.+++... .+++++|++|..-.. .+.+.. ++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 356899999999999999998764 368999999965210 011110 110
Q ss_pred chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC--------Chh
Q 005855 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (673)
Q Consensus 278 r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~--------~~~ 349 (673)
-.-+..++..||.|..-++.|++..++. .+. ..++....+..++.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 0134567889999999999888765421 110 0111222345679999999999999874211 000
Q ss_pred ----HHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHH
Q 005855 350 ----QVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (673)
Q Consensus 350 ----~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~ 420 (673)
......+++.+ ++.++|++|||+++.||++.+++|+.+++++.+ .|+++|.+ + +++ ..
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~-~~~---~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---K-KKF---EK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---C-HHH---HH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---C-chH---HH
Confidence 11122344444 367899999999999999999999999976543 36666642 2 222 23
Q ss_pred HHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchh
Q 005855 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (673)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~ 500 (673)
.++.+....+. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||| .|+|+|+.+|+.+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 33444433321 2443 567899999999999999999999999999999999995 9999999999999
Q ss_pred hc--cCceE----------EECCCCHHHHHHHHHHHhcCC-HHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 501 SL--GAGAI----------LVNPWNITEVANAIARALNMS-PEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 501 ~l--g~~gl----------lVnP~D~~~lA~aI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
.+ |.+|+ +|+|.|++++|++|.++|..- .++.+++.+++ ..++++|++-+++|++.+.+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Confidence 88 66777 788899999999999998632 22333333322 225688888899988877654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=246.30 Aligned_cols=301 Identities=19% Similarity=0.149 Sum_probs=211.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch----hhhhc--CC-------------cchHHHHhhhcCCEE
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~----e~fr~--lp-------------~r~~il~~ll~aDlI 291 (673)
..|+||+|+++..+++.+++.+..++++++.+|..++.. ..+.. ++ ........+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 569999999998888888764456789999999875421 11111 01 011222345679999
Q ss_pred EEeCHHHHHHHHHHHHHHhccccCCCceeeCCee--eEEEEeecCcChhhhhhhhcC-----------ChhHHHHHHHHH
Q 005855 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (673)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~--~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (673)
...+....+.+... .+|.... .+ ..... .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~~--~~-~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGME--GL-LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTCH--HH-HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcchH--HH-HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 99988766554321 0110000 00 00011 478899999999988764211 000112344566
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcccc
Q 005855 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (673)
Q Consensus 359 ~~~-----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~ 433 (673)
+++ ++++|+++||+++.||+..+++|++.+.+ + ++.|+++|.+ ++ .+.+++++++.+.+
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g-----~~--~~~~~l~~~~~~~~--- 346 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q----GGQLALLGAG-----DP--VLQEGFLAAAAEYP--- 346 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T----TCEEEEEEEE-----CH--HHHHHHHHHHHHST---
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--C----CcEEEEEeCC-----ch--HHHHHHHHHHHhCC---
Confidence 553 57899999999999999999999999876 2 3568888842 21 23556666665532
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c--------
Q 005855 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (673)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g-------- 503 (673)
..|+++.|. +.+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ |
T Consensus 347 -----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 347 -----GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp -----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred -----CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC----CCEEECCCCCccceeccCcccccccc
Confidence 146656676 88888999999999999999999999999999995 999999999999888 4
Q ss_pred -CceEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 504 -~~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
.+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.++++..++++++.+++...+
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 68999999999999999999994 245566666666553 7899999999998888776433
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-25 Score=242.74 Aligned_cols=295 Identities=18% Similarity=0.184 Sum_probs=213.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhh-hhcC----C-cchHH-HHhhhcCCEEEEeCHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P-SRSDL-LRAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~-fr~l----p-~r~~i-l~~ll~aDlIgF~t~~~~~~Fl 303 (673)
..|+|++|++...+++.++++. .+.++.+.+|..++.... +... + .+..+ ...+..+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999997665555555543 367889999987432110 0000 0 01111 1234579999999977666553
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 005855 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 304 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 380 (673)
+ .+|.. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||+..
T Consensus 201 ~----~~g~~-----------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDAD-----------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCCC-----------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCCC-----------hhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 2 23322 346889999999988865321 1112345555 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 005855 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 381 ~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (673)
+++|++.+.+++|+. ++.|+++|.+.. +++. .+++++++.+.+. .+ .|+ +.|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l----~~--~v~-~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGV----EK--RIR-FLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTC----TT--TEE-EECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCC----CC--cEE-EcCCCChHHHHHHHHhC
Confidence 999999999988742 467888875321 1222 3445555554331 11 355 46899999999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|++++|++|.++++. ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999995 899999999999888 4579999999999999999999985 4577777888
Q ss_pred hhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+++++.++++...++++++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899998899999999999988877654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-25 Score=243.75 Aligned_cols=300 Identities=16% Similarity=0.175 Sum_probs=211.3
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEeEeccCCCch----hhhhc--CCc-------------chHHHHhhhcCCE
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~Ig~flH~PfP~~----e~fr~--lp~-------------r~~il~~ll~aDl 290 (673)
..|+||+|+++..+++.+++.. ..++++.+.+|..++.. ..+.. ++. .......+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5699999999888888887764 46789999999875421 11111 110 1122334567999
Q ss_pred EEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC-----------ChhHHHHHHHHHH
Q 005855 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (673)
Q Consensus 291 IgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (673)
|...+....+.+.+. .+|.... . .+.....++.++|+|||.+.|.+.... +........++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~~--~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGLE--G-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTCH--H-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcchH--H-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 999988766654321 0110000 0 000013478899999999988764211 0011122345555
Q ss_pred hc---C-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCC
Q 005855 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (673)
Q Consensus 360 ~~---~-~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~ 435 (673)
++ + +++|+++||+++.||+..+++|+..+.+. ++.|+++|.+ ++ .+++++++++.+.+
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------~~~l~ivG~g-----~~--~~~~~l~~~~~~~~----- 345 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAG-----DV--ALEGALLAAASRHH----- 345 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT------TCEEEEEECB-----CH--HHHHHHHHHHHHTT-----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhc------CceEEEEeCC-----ch--HHHHHHHHHHHhCC-----
Confidence 52 2 67999999999999999999999998752 4668888842 21 23456666665542
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c---------C
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g---------~ 504 (673)
..|+++.|. +.+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ | .
T Consensus 346 ---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 346 ---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 136656666 88888999999999999999999999999999995 999999999999888 4 6
Q ss_pred ceEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHH
Q 005855 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 505 ~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.++++..++++++..+++..
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhhC
Confidence 8999999999999999999994 235566666666654 788999999999888876543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=249.80 Aligned_cols=303 Identities=16% Similarity=0.087 Sum_probs=215.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhh-hhcC----C---------cchHH-HHhhhcCCEEEEeC
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P---------SRSDL-LRAVLAADLVGFHT 295 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~-fr~l----p---------~r~~i-l~~ll~aDlIgF~t 295 (673)
..|+||+|+++..+++.++++. .++++.+++|..++.... +... | ....+ ...+..+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998776666666544 357888999986432110 0000 0 00011 22345789998888
Q ss_pred HHHHHHHHHHHHHH--hc-cccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--------cCCc
Q 005855 296 YDYARHFVSACTRI--LG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--------AGRK 364 (673)
Q Consensus 296 ~~~~~~Fl~~~~r~--l~-~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--------~~~~ 364 (673)
....+.+.. . +| ... .....++.++|+|||.+.|.+... ......+++++ .+++
T Consensus 199 ~~~~~~~~~----~~~~g~~~~-------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 199 SQERFGQYS----HDLYRGAVN-------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHHHTTT----SGGGTTTCC-------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHHHh----hhccccccc-------ccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 755544321 1 11 100 002357899999999998875321 11223344443 3678
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC----h---HHHHHHHHHHHHHHHhhccccCCCC
Q 005855 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD----V---PEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 365 iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~----~---~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+|+++||+.+.||+..+++|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+.+.. +
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----~ 335 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----G 335 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB----T
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC----c
Confidence 9999999999999999999999998776642 4577666411 11 0 11223456677777664421 1
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc----CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 511 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP 511 (673)
.|+ |.|.++.+++..+|+.| |++|+||.+||||++++|||||| .|+|+|+.+|..+.+ |.+|++|+|
T Consensus 336 --~V~-~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 336 --KVS-MFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp --TEE-EEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECT
T ss_pred --eEE-ECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCC
Confidence 355 46899999999999999 99999999999999999999995 899999999988888 457999999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh-CCHHHHHHHHHHHHHHhHHH
Q 005855 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~~~~~~ 565 (673)
.|++++|++|.++++. ++.+.++.+++++++.+ ++++..++++++.++++...
T Consensus 409 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 409 EDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999985 45777888888898877 99999999999988877654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-25 Score=234.52 Aligned_cols=282 Identities=18% Similarity=0.212 Sum_probs=209.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHH-HhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il-~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
..|+||+|+...+.+...+.++....++.+.+|...+. +...+....+. ..+..+|.|.+.+....+.+.+ .
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~ 158 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG---WSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS----A 158 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---HTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----H
T ss_pred CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---hhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----h
Confidence 35999999876554333333333444688888965321 11222222232 3356799999999876665543 2
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc---CCceEEEeecccccCChHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFE 386 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~~L~Af~ 386 (673)
.+ ...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||+..+++|++
T Consensus 159 ~~------------~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 159 FG------------SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp HC------------SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred cC------------CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHH
Confidence 22 134789999999999886521 123345666662 5589999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEc
Q 005855 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (673)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (673)
++.+++|++ .|+++|. ++.. +.+++++..++ ..|+ +.|.++.+++..+|+.||++|+|
T Consensus 222 ~l~~~~~~~----~l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~v~p 279 (394)
T 3okp_A 222 QVIAARPDA----QLLIVGS-----GRYE----STLRRLATDVS--------QNVK-FLGRLEYQDMINTLAAADIFAMP 279 (394)
T ss_dssp HHHHHSTTC----EEEEECC-----CTTH----HHHHHHTGGGG--------GGEE-EEESCCHHHHHHHHHHCSEEEEC
T ss_pred HHHhhCCCe----EEEEEcC-----chHH----HHHHHHHhccc--------CeEE-EcCCCCHHHHHHHHHhCCEEEec
Confidence 999988865 4887763 2322 33444432222 1355 46889999999999999999999
Q ss_pred CCC-------cCCChhHHHHHhhccCCCceEEEeCCCCchhhcc-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 467 SLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 467 Sl~-------EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|.. ||||++++|||||| .|+|+|+.+|..+.+. .+|++++|.|++++|++|.++++. +++++++.++
T Consensus 280 s~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~ 354 (394)
T 3okp_A 280 ARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAA 354 (394)
T ss_dssp CCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHH
T ss_pred CccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 999 99999999999995 8999999999998882 289999999999999999999985 4577788888
Q ss_pred hhHHHhh-CCHHHHHHHHHHHHHHhH
Q 005855 539 NFTHVTT-HTAQEWAETFVSELNDTV 563 (673)
Q Consensus 539 ~~~~v~~-~~~~~W~~~fl~~L~~~~ 563 (673)
+++.+.+ ++++.+++++++.+++..
T Consensus 355 ~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 355 GRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8888865 899999999999888754
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=238.57 Aligned_cols=280 Identities=21% Similarity=0.200 Sum_probs=200.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|+++...+..+++. ..++.+.+|..++.... .....+.+.+..+|.+.+.+.++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~--------- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP--------- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT---------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh---------
Confidence 469999999887766655543 27899999987653210 00111222234556555443322111
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~~ 387 (673)
.+ ...++.++|+|||+..|.+.... ......+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 190 -------~~----~~~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 190 -------EL----DRNKAVIMPPSIDPLSEKNVELK---QTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp -------TS----CTTTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred -------hC----CccceEEeCCCCChhhhcccccC---hhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 11 11467899999998777543211 12334566665 367899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCC---CCCHHHHHHHHHHcCEEE
Q 005855 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (673)
Q Consensus 388 ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~---~v~~~el~aly~~ADv~v 464 (673)
+.+++|++ .|+++|.+... .+++ .+.+++++.+.+.. ..|++ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~----~l~i~G~g~~~-~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGV----QLLLVGVMAHD-DPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTC----EEEEEECCCTT-CHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCe----EEEEEecCccc-chhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 99988865 48888854321 1332 33444555444321 13665 44 455889999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++ |++++|++|.++++. ++.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9999999999999999995 899999999988888 56899997 999999999999985 45677778888888
Q ss_pred Hh-hCCHHHHHHHHHHHHHHh
Q 005855 543 VT-THTAQEWAETFVSELNDT 562 (673)
Q Consensus 543 v~-~~~~~~W~~~fl~~L~~~ 562 (673)
+. .+++...++++++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 85 789999999998877653
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=260.09 Aligned_cols=312 Identities=11% Similarity=0.100 Sum_probs=213.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcch---------H---HHHhhhcCCEEEEeCHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------D---LLRAVLAADLVGFHTYDY 298 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~---------~---il~~ll~aDlIgF~t~~~ 298 (673)
..|+||.|++...+++.+++++. +++++++.|...+.........|.. . -...+..||.|...+...
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 56999999877777777776654 6889999997532111101011100 0 012466899999888765
Q ss_pred HHHHHHHHHHHhccccC---C------CceeeCCeeeEEEEeecCcChhhhhhhhcCCh----hHHHHHHH-------HH
Q 005855 299 ARHFVSACTRILGFEGT---P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------QE 358 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~---~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~----~~~~~~~l-------r~ 358 (673)
+......+.. .+.... + .++.... .++.++|+|||.+.|.+...... .......+ ++
T Consensus 486 ~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~--~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~ 562 (816)
T 3s28_A 486 IAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKE 562 (816)
T ss_dssp HHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTC--TTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTT
T ss_pred HHHHHHHHHH-hhhhhccccchhhhcccccccCC--CCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHH
Confidence 5431110000 000000 0 0111111 18999999999999987542211 01111111 01
Q ss_pred H-----hcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC--CCChHHHHHHHHHHHHHHHhhcc
Q 005855 359 T-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRING 431 (673)
Q Consensus 359 ~-----~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~ps--r~~~~ey~~l~~~l~~lv~~IN~ 431 (673)
. ..++++|+++||+++.||+..+++|+.++.+.+|+ +.|+++|.+. .....+..+..+++.+++.+.+.
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~----v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL 638 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL----ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKL 638 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH----CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC----eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCC
Confidence 1 13678999999999999999999999999887765 4588888644 11223344456677777766542
Q ss_pred ccCCCCcccEEEeCC----CCCHHHHHHHHH-HcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cC
Q 005855 432 RFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GA 504 (673)
Q Consensus 432 ~~g~~~~~pV~~~~~----~v~~~el~aly~-~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~ 504 (673)
. ..|.| .| .++.+++..+|+ +|||||+||.+||||++++|||||| .|+|+|+.+|..+.+ |.
T Consensus 639 ~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~dg~ 707 (816)
T 3s28_A 639 N------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVHGK 707 (816)
T ss_dssp B------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCBTT
T ss_pred C------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC----CCEEEeCCCChHHHHccCC
Confidence 1 13555 45 445689999998 6899999999999999999999995 999999999999998 67
Q ss_pred ceEEECCCCHHHHHHHHHHHh----cCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHHh
Q 005855 505 GAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 505 ~gllVnP~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 562 (673)
+|++|+|.|++++|++|.+++ ..+ +.+.++.+++++++ +.|++..+++++++..+..
T Consensus 708 ~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 708 SGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred cEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 899999999999999998877 555 47788888889988 7899999999998877654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-24 Score=232.69 Aligned_cols=283 Identities=15% Similarity=0.099 Sum_probs=203.8
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CC-CCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCC--EEEEeCHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~-~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aD--lIgF~t~~~~~~Fl~~~ 306 (673)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+.. +..+...+..+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------RENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC--------CGGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh--------HHHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4599999955444433332222 22 345566666543321 111223345677 888888765555432
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---c--CCceEEEeecccccCChHHH
Q 005855 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (673)
Q Consensus 307 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIl~VgRLd~~KGi~~~ 381 (673)
++. ..++.++|+|||.+.|.. .++++ . ++++|+++||+.+.||+..+
T Consensus 151 ---~~~------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YGC------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TTC------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cCC------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 221 247889999999988721 12222 2 67899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC-cccEEEeCCCCCHHHHHHHHHHc
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-AVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~-~~pV~~~~~~v~~~el~aly~~A 460 (673)
++|+.++.+++|+++ |+++|.+..... ..+++.+++++.+.+-.- ... +..++++.|.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999998865 888886442211 124455666665543210 000 00256678999999999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCc---------------eE--EECCCCHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAI 521 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~---------------gl--lVnP~D~~~lA~aI 521 (673)
|++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 99999999999999999999995 899999999998888 344 88 99999999999999
Q ss_pred HHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHHhHHH
Q 005855 522 ARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 522 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
++++. ++++.++.+++++++ +.++++.+++++++.++++.+.
T Consensus 351 -~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99985 557788888889988 5789999999999999886543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-24 Score=231.73 Aligned_cols=276 Identities=17% Similarity=0.098 Sum_probs=209.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.+....++.++.+. .+.++.+.+|..+|....++.+-.. +-..+..+|.+.+.+......+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4599999998887765555443 3588999999988765433221111 114456799999999766655543 12
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~~L~Af~~ll 389 (673)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 2 1367 9999999998875432110 0 1256899999999 99999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (673)
+++|++ .|+++|. +++ ..++ +++.+.. ..|. +.|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~----~l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDV----EILIVGR-----GDE-DELR----EQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTC----EEEEESC-----SCH-HHHH----HHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCe----EEEEEcC-----CcH-HHHH----HHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 888765 4777764 222 3333 3333321 1355 5789999999999999999999997
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
.||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++.+ +.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDD-QLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHhC
Confidence 999999999999995 899999998888888 46899999999999999999999854 56777788889999899
Q ss_pred CHHHHHHHHHHHHHHhHHH
Q 005855 547 TAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~~~~~ 565 (673)
++...++++++.+++....
T Consensus 368 s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp BHHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999998888876543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=231.15 Aligned_cols=280 Identities=17% Similarity=0.190 Sum_probs=200.5
Q ss_pred CCCEEEEeCccchhHHHHH-HhhCC-CCeEEeEeccCCCchhhhhcCCcchHH-HHhhhcCCEEEEeCHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCL-KEYNS-DMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACT 307 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~L-r~~~~-~~~Ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (673)
..|+|++|+.....++.++ +.... +.++.+.+|...+ ..+..-+....+ ...+..+|.|...+....+.+.+
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 4599999986654444444 33333 6899999997421 111111222222 23355799999998766555432
Q ss_pred HHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHH
Q 005855 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 308 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
..+ ...++.++|+|||++.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~~------------~~~~~~vi~ngv~~~~~~~~~--~------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LVK------------PNKDIQTVYNFIDERVYFKRD--M------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HTC------------CSSCEEECCCCCCTTTCCCCC--C------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hhC------------CcccEEEecCCccHHhcCCcc--h------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 221 124788999999999886531 1 1234444 357899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
++.+.++ ++ +.|+++|. +++.. ++++++.+.+. . ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~~----~l~~~~~~~~l----~--~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEFC----TILQLVKNLHI----E--DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTHH----HHHHHHHTTTC----G--GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHHH----HHHHHHHHcCC----C--CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998766 33 45887763 23333 34444444321 1 12443 453 578999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999995 999999999999888 5789999999999999999999985 45677778888888
Q ss_pred H-hhCCHHHHHHHHHHHHHHhHH
Q 005855 543 V-TTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 543 v-~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+ +.++++..++++++.++++..
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHhCCHHHHHHHHHHHHHHHHh
Confidence 8 889999999999998887643
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-22 Score=229.22 Aligned_cols=313 Identities=13% Similarity=0.070 Sum_probs=204.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccC----C----CchhhhhcCC--------------cchH-HHHhhhc
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP--------------SRSD-LLRAVLA 287 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~P----f----P~~e~fr~lp--------------~r~~-il~~ll~ 287 (673)
..|++|+||||..++|.+||+..++++.+|+.|.- + -..+++..+. ..-. .-.++..
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~ 260 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHS 260 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHh
Confidence 46999999999999999999999999999999975 1 1111121111 0111 2235678
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCC----hhHHHHH-HHHHHh--
Q 005855 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIK-ELQETF-- 360 (673)
Q Consensus 288 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~----~~~~~~~-~lr~~~-- 360 (673)
||.|...++.|++.-. .+++.. ...+ ||||||++.|.+..... ..++.++ .++..+
T Consensus 261 AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~ 323 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHG 323 (725)
T ss_dssp SSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999888776533 344321 2233 99999999987631100 0111111 122212
Q ss_pred -----cCCceEEE-eeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHH-----HH----HHHHHH
Q 005855 361 -----AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPE-----YQ----RLTSQV 422 (673)
Q Consensus 361 -----~~~~iIl~-VgRLd-~~KGi~~~L~Af~~ll~~~--P~~~~~v~Lvqvg~psr~~~~e-----y~----~l~~~l 422 (673)
.++++|++ +||++ ..||++.+++|+.++...- -+....|+-+ |..|+...... .+ +|++.+
T Consensus 324 ~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~~~ 402 (725)
T 3nb0_A 324 CFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALENTV 402 (725)
T ss_dssp CCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHHHH
Confidence 24566666 79999 5899999999999986431 1111123222 33355433311 11 122111
Q ss_pred HHHH-------------------------------------------------------------------------Hhh
Q 005855 423 HEIV-------------------------------------------------------------------------GRI 429 (673)
Q Consensus 423 ~~lv-------------------------------------------------------------------------~~I 429 (673)
+.+- .++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l 482 (725)
T 3nb0_A 403 HEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQV 482 (725)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhc
Confidence 1111 011
Q ss_pred ccccCCCCcccEEEeCCCCCHH------HHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-
Q 005855 430 NGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (673)
Q Consensus 430 N~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l- 502 (673)
+-.=...+...|+|+.+.++.. ++..+|+.||+||+||++||||++++|||||| .|+|+|+.+|+.+.+
T Consensus 483 ~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G----~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 483 QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG----VPSITTNVSGFGSYME 558 (725)
T ss_dssp TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT----CCEEEETTBHHHHHHH
T ss_pred CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC----CCEEEeCCCChhhhhh
Confidence 0000001234578888888876 58999999999999999999999999999995 999999999998877
Q ss_pred -c-------CceEEEC---CCCHHHHHHHHHHHh----cCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 503 -G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 503 -g-------~~gllVn---P~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+ .+|++|. |.|+++++++|.++| .+++.++..+.+++++..+.++|..-++.+++..+.+...
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2 2589884 567777666666665 4677677777777778888999999999999888877644
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=193.93 Aligned_cols=190 Identities=21% Similarity=0.235 Sum_probs=149.8
Q ss_pred eecCcChhhhh--hhhcCChhHHHHHHHHHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHH--HhCcCccCceEEEE
Q 005855 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (673)
Q Consensus 331 iP~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd-~~KGi~~~L~Af~~ll--~~~P~~~~~v~Lvq 403 (673)
+|+|||++.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|+ +.|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEE
Confidence 69999999998 542 111222345666663 677999999999 9999999999999997 77665 55887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|... + +...++++++.+.+ .|++..|.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~~~----~---~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGKGD----P---ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECCBC----H---HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECCCC----h---HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 77421 1 12345555555432 35643799999999999999999999999999999999999995
Q ss_pred cCCCceEEEeCCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.++++.++.+++++++++|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 899999999999888 77899999999999999999999977778888888888887654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=215.45 Aligned_cols=239 Identities=14% Similarity=0.008 Sum_probs=181.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.++...+. .+..+.+ .+.+|..++... .+|.|.+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 4699999998765443 2345678 888998875321 188888888655443321
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
..++.++|+|||.+.|.+... ...++++|+++||+.+.||+..+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 235678999999988865321 123567899999999999999999999886
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-- 468 (673)
++.|+++|.+ ++.. .+++++.+++ ..|+ +.|.++.+++..+|+.||++|+||.
T Consensus 188 -------~~~l~i~G~g-----~~~~----~l~~~~~~~~--------~~v~-~~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 -------GRRLVLAGPA-----WEPE----YFDEITRRYG--------STVE-PIGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp -------TCCEEEESCC-----CCHH----HHHHHHHHHT--------TTEE-ECCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred -------CcEEEEEeCc-----ccHH----HHHHHHHHhC--------CCEE-EeccCCHHHHHHHHHhCCEEEECCccc
Confidence 2457777642 2222 3333444433 1355 5799999999999999999999999
Q ss_pred --------CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 469 --------~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
.||||++++|||||| .|+|+|+.+|..+.+ |.+|++++| |++++|++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999995 999999999999888 357999999 99999999999987 3
Q ss_pred HHhhHHH-hhCCHHHHHHHHHHHHHHhHH
Q 005855 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 537 ~~~~~~v-~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+++++++ +++++...++++++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3445555 678999999999888887654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=220.77 Aligned_cols=229 Identities=14% Similarity=0.163 Sum_probs=177.0
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCC
Q 005855 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (673)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (673)
.+|.|.+.+......+.+ .++.. ..++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~-----------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTE-----------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCC-----------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCC-----------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 589999999876666543 22321 34788999999999987654322 223455555 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~-~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|.+. + +.+++ ++.+.+. . ..|+
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~~~----~~~~~~~----~--~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKFEA----LAEKLGV----R--SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHHHH----HHHHHTC----G--GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHHHH----HHHHcCC----C--CcEE
Confidence 8999999999999999999999998766 454 5688887532 1 23333 3333221 1 1366
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEEC-CCCHHHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVn-P~D~~~lA~ 519 (673)
++ |. .+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ +.+|++++ |.|++++|+
T Consensus 257 ~~-g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 FF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp EE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred EC-CC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 54 54 4789999999999999999999999999999995 899999999999888 57899998 999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 520 aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
+|.++++. ++.+.++.+++++.+.++++..|++.+.+.++..
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99999985 5577788888899999999999999988877643
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=174.97 Aligned_cols=162 Identities=13% Similarity=0.069 Sum_probs=123.1
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
+.+|+++||+.+.||+..+++|+..+ +++| ++.|+++|. ++....++ +++.+.+. .+.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~----~~~l~i~G~-----g~~~~~~~----~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQ----DIVLLLKGK-----GPDEKKIK----LLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGG----GEEEEEECC-----STTHHHHH----HHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCC----CeEEEEEeC-----CccHHHHH----HHHHHcCC--------eEE
Confidence 46899999999999999999999987 3344 466888874 23333344 44433321 233
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCc-eEEEeC-CCCchhhccCceEEECCCCHHHHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVANA 520 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g-~lVlSe-~aG~~~~lg~~gllVnP~D~~~lA~a 520 (673)
+ +.++.+++..+|+.||++|+||..||||++++|||||| . |+|++. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G----~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG----IVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT----CCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC----CCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 89999999999999999999999999999999999994 6 777744 55555555566779999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
|.++++. ++.+.++.+++++++++|+++.+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999995 5577778888888888888776654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-19 Score=196.93 Aligned_cols=175 Identities=9% Similarity=0.032 Sum_probs=129.1
Q ss_pred EEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 005855 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (673)
Q Consensus 327 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg 405 (673)
++.++|+|+|.+.|.+... ...+++.|+++||+ .+.||+..+|+|++.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999887753210 11356789999997 68999999999999998888852 135688888
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccC
Q 005855 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (673)
Q Consensus 406 ~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~ 485 (673)
.+.. . .+.+.. ..|+ |.|.++.+++.++|+.|||||+||.+||||++++||||||
T Consensus 284 ~~~~-~-------------------~~l~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D-------------------IALGKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C-------------------EEEETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h-------------------hhcCCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4321 0 011111 1355 5789999999999999999999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
.|+|++ .+|+.+.+ |.+|++|+|.|++++|++|.++++++. .+.+ ++++.+++++
T Consensus 339 --~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~~~~~~~~~~ 395 (413)
T 2x0d_A 339 --LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---DKKESSNMMF 395 (413)
T ss_dssp --CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCBSCGG
T ss_pred --CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---hHHHHHHhCC
Confidence 777775 46777766 678999999999999999999998654 3332 3444454443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=184.71 Aligned_cols=270 Identities=14% Similarity=0.129 Sum_probs=175.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
..|+|++|......++..+..+..++++.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+.+
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 167 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK---- 167 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH----
Confidence 35999998753333332222233467777665542 2212111 22233444332 389998888766655532
Q ss_pred HhccccCCCceeeCCeeeEEEEeecC-cChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEeeccccc-CChHHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMI-KGIPQKLLAF 385 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~-KGi~~~L~Af 385 (673)
.|.. ..++.++|+| +|...+.+..... ..+++++. ++.+++++||+.+. ||+..+++|+
T Consensus 168 -~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~ 229 (375)
T 3beo_A 168 -ENKD-----------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAI 229 (375)
T ss_dssp -TTCC-----------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHH
T ss_pred -cCCC-----------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHH
Confidence 2321 2468899999 8887765421111 12333343 34467799999986 9999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEE
Q 005855 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (673)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (673)
+++.+++|+++ ++ ++.. ++ .+++++++++++. . ..|++ .+.++..++..+|+.||++|+
T Consensus 230 ~~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~~v~ 288 (375)
T 3beo_A 230 KRLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD-------Y--GRIHL-IEPLDVIDFHNVAARSYLMLT 288 (375)
T ss_dssp HHHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTCSEEEE
T ss_pred HHHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc-------c--CCEEE-eCCCCHHHHHHHHHhCcEEEE
Confidence 99988888653 44 3321 11 1345555555321 0 13554 578898999999999999999
Q ss_pred cCCCcCCChhHHHHHhhccCCCceEEEeCC-CCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 466 ~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
|| |.+++|||||| .|+|+|.. +|..+.+ ..+|++|++ |++++|++|.++++.+ +.++++.++++++.
T Consensus 289 ~s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~ 357 (375)
T 3beo_A 289 DS-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMSKASNPYG 357 (375)
T ss_dssp CC-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHCCCCCTTC
T ss_pred CC-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhhhcCCCCC
Confidence 99 67799999995 89999964 7776666 238999987 9999999999999854 46666666667776
Q ss_pred hhCCHHHHHHHHHH
Q 005855 544 TTHTAQEWAETFVS 557 (673)
Q Consensus 544 ~~~~~~~W~~~fl~ 557 (673)
..++++..++.+.+
T Consensus 358 ~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 358 DGRASERIVEAILK 371 (375)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 66666666665544
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-19 Score=194.33 Aligned_cols=240 Identities=10% Similarity=-0.011 Sum_probs=158.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
..|+||.++.....+..+.+.. +.++.+.+|....- ..+...+.. ......+..+|.|...+....+.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------- 192 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAE-------- 192 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGG--------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHH--------
Confidence 4588885443322222334433 35566667764320 111111111 12223355677776655422111
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
+.-.+ ++.++|+|||.+.|.+.... ...++++|+++||+.+.||+ ++.+.
T Consensus 193 ---------~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 193 ---------VVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp ---------CSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred ---------HHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 11112 78999999999988754221 11244899999999999999 45555
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (673)
++.|+ +.|+++|.+ + +. +.|.. ..|+ |.|.++.+++.++|+.||++|+||..
T Consensus 243 ~~~~~----~~l~ivG~g-----~------------~~----~~~l~--~~V~-f~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQ----VTFHVIGSG-----M------------GR----HPGYG--DNVI-VYGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTT----EEEEEESCS-----S------------CC----CTTCC--TTEE-EECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCC----eEEEEEeCc-----h------------HH----hcCCC--CCEE-EcCCCCHHHHHHHHHhcCEEEECCCc
Confidence 66775 458888632 2 11 11211 1366 46899999999999999999999999
Q ss_pred cCCChhHHHHH-------hhccCCCceEEEeCCCCchhhc-cCceEE-ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 005855 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (673)
Q Consensus 470 EGf~Lv~lEam-------A~~~~~~g~lVlSe~aG~~~~l-g~~gll-VnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (673)
||||++++||| ||| .|+|+|+. .. +.+|++ |+|.|++++|++|.++++++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 995 89999987 22 568999 999999999999999998774 1
Q ss_pred HHHhhCCHHHHHHHHHHH
Q 005855 541 THVTTHTAQEWAETFVSE 558 (673)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~ 558 (673)
+..++++++..++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 345678877777776543
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-18 Score=180.80 Aligned_cols=274 Identities=13% Similarity=0.129 Sum_probs=174.5
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
.|+|++|+.....++..+..+..++++.+..|... +...+. ++.....+.+ ..+|.+...+....+.|..
T Consensus 87 pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~----- 158 (384)
T 1vgv_A 87 PDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQNLLR----- 158 (384)
T ss_dssp CSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHHHHH-----
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHHHHHH-----
Confidence 59999997533333433333445678877766432 212111 1122223322 2389998888766655532
Q ss_pred hccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhc----CC-ceEEEeeccccc-CChHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KGIPQKL 382 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIl~VgRLd~~-KGi~~~L 382 (673)
.|.. ..++.++|+|+ |...+.+....+. ......++++++ ++ .+++++||+.+. ||+..++
T Consensus 159 ~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li 226 (384)
T 1vgv_A 159 ENVA-----------DSRIFITGNTVIDALLWVRDQVMSS-DKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEIC 226 (384)
T ss_dssp TTCC-----------GGGEEECCCHHHHHHHHHHHHTTTC-HHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHH
T ss_pred cCCC-----------hhhEEEeCChHHHHHHhhhhccccc-hhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHH
Confidence 2321 23678899995 5433322110000 001123444432 33 467899999987 9999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCE
Q 005855 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (673)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (673)
+|+.++.+++|++ .|++++++ ++ .++++++++++. . ..|++ .+.++.+++..+|+.||+
T Consensus 227 ~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~ 285 (384)
T 1vgv_A 227 HALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH-------V--KNVIL-IDPQEYLPFVWLMNHAWL 285 (384)
T ss_dssp HHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc-------C--CCEEE-eCCCCHHHHHHHHHhCcE
Confidence 9999999888764 46554322 22 234555555421 0 13654 577888999999999999
Q ss_pred EEEcCCCcCCChhHHHHHhhccCCCceEEEeCC-CCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 005855 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (673)
Q Consensus 463 ~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (673)
+|.|| |.+++|||||| .|+|+|.. +|..+.+ | +|++|+| |++++|++|.++|+++ +.++++.+++
T Consensus 286 ~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~-~~~~~~~~~~ 353 (384)
T 1vgv_A 286 ILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE-NEYQAMSRAH 353 (384)
T ss_dssp EEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH-HHHHHHHSSC
T ss_pred EEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh-HHHhhhhhcc
Confidence 99999 44589999995 89999987 6766666 4 8999988 9999999999999854 4666666666
Q ss_pred hHHHhhCCHHHHHHHHHHH
Q 005855 540 FTHVTTHTAQEWAETFVSE 558 (673)
Q Consensus 540 ~~~v~~~~~~~W~~~fl~~ 558 (673)
+++...++++..++.+++.
T Consensus 354 ~~~~~~~~~~~i~~~~~~~ 372 (384)
T 1vgv_A 354 NPYGDGQACSRILEALKNN 372 (384)
T ss_dssp CTTCCSCHHHHHHHHHHHT
T ss_pred CCCcCCCHHHHHHHHHHHH
Confidence 7666666666666555443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.7e-18 Score=162.87 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=113.8
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 361 ~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.++++|+++||+.+.||+..+++|++.+ |+ +.|+++|... +...+++.++++ ..+ .. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~----~~l~i~G~~~-----~~~~l~~~~~~~--~~~----l~--~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QD----EKLYIVGWFS-----KGDHAERYARKI--MKI----AP--DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TT----SCEEEEBCCC-----TTSTHHHHHHHH--HHH----SC--TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CC----cEEEEEecCc-----cHHHHHHHHHhh--hcc----cC--Cc
Confidence 3678999999999999999999999986 44 4477777432 112333333311 111 11 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (673)
|.+ .|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|+++ +.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 554 689999999999999999999999999999999999995 899999998888887 5689999 99999999
Q ss_pred HHHHHHhcCCH
Q 005855 519 NAIARALNMSP 529 (673)
Q Consensus 519 ~aI~~aL~m~~ 529 (673)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998875
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=178.81 Aligned_cols=199 Identities=13% Similarity=0.030 Sum_probs=148.0
Q ss_pred eEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 005855 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (673)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq 403 (673)
.++.++|+++++....+..... ..++++ ++.++++++||+.+ ||++.+|+|+.++++++|++ .|++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~----~l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDS----VLWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTC----EEEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCc----EEEE
Confidence 5788999965543221110000 122333 34567889999999 99999999999999999875 4887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|. +++.. +++++++.+.+. . ...|+ |.|.++.+++..+|+.|||||+||.+ |||++++||||||
T Consensus 412 ~G~----~g~~~----~~l~~~~~~~~l----~-~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEAD----ARLRAFAHAQGV----D-AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHH----HHHHHHHHHTTC----C-GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHH----HHHHHHHHHcCC----C-hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 762 23433 344444444321 1 01355 47899999999999999999999999 9999999999995
Q ss_pred cCCCceEEE-------eCCC-------CchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH---hhC
Q 005855 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (673)
Q Consensus 484 ~~~~g~lVl-------Se~a-------G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v---~~~ 546 (673)
.|+|+ |+.+ |+.+.+ .+ |+++++++|.++++.+ +.+..+.+++++.+ ..+
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCC
Confidence 89999 8888 887776 22 8999999999999864 46777778888888 678
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 005855 547 TAQEWAETFVSELNDTVV 564 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~~~~ 564 (673)
++...++.+++.+++...
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999888876654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-15 Score=162.96 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=156.5
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+.+..+ .|+|++|++....++..+..+..++++.+ .|.++.+...+. ++.....+.+ ..+|.+...+....+.|
T Consensus 86 ~l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l 161 (376)
T 1v4v_A 86 ALKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 161 (376)
T ss_dssp HHHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHH
Confidence 334444 49999998765555544433344677754 454443222211 1222233322 24788888877655554
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEeecccccCChHH
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~ 380 (673)
.+ .|. ...++.++|+++ |...+.+.. ..++++++ ++.+++++||+...||+..
T Consensus 162 ~~-----~g~-----------~~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~ 216 (376)
T 1v4v_A 162 LK-----EGK-----------REEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSD 216 (376)
T ss_dssp HT-----TTC-----------CGGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHH
T ss_pred HH-----cCC-----------CcceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHH
Confidence 32 122 124677888854 543332110 01222233 3456678999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 005855 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 381 ~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (673)
+++|++.+.+++|+++ |++++++ ++ .++++++++++. . ..|++ .+.++..++..+|+.|
T Consensus 217 ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 217 LAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLKG-------V--RNFVL-LDPLEYGSMAALMRAS 275 (376)
T ss_dssp HHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTE
T ss_pred HHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhcc-------C--CCEEE-ECCCCHHHHHHHHHhC
Confidence 9999999988888753 5544222 22 234455555421 1 14654 5778888999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC-CCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe-~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|++|.|| +|+ .+|||||| .|+|++. .+|..+.+ +.+|++|+ .|++++|++|.++|+.+ +.++++.+.
T Consensus 276 d~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~~ 344 (376)
T 1v4v_A 276 LLLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRKA 344 (376)
T ss_dssp EEEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHHS
T ss_pred cEEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-Hhhhhhccc
Confidence 9999999 543 88999995 8888875 45655555 34688886 49999999999999854 355554443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=163.63 Aligned_cols=250 Identities=12% Similarity=-0.023 Sum_probs=158.0
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
+++..+| |+|+++.++++. .++..... ++.+..+. +.. +.-....+..+|.|.+++....+.|.+
T Consensus 106 ~l~~~~p-Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~~~~~~~~~~d~ii~~S~~~~~~l~~ 170 (374)
T 2xci_A 106 FEELSKP-KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SLIEKILSKKFDLIIMRTQEDVEKFKT 170 (374)
T ss_dssp HHHHHCC-SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CHHHHHHHTTCSEEEESCHHHHHHHHT
T ss_pred HHHHhCC-CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 3444455 899888777653 33332222 44443332 211 111112245699999999887766532
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
+| .. ++.++|+|. |..... + +..+ .+++++++++ ..||+..+++|
T Consensus 171 -----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~--~~k~~~~ll~A 215 (374)
T 2xci_A 171 -----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSI--HTGEVEIILKA 215 (374)
T ss_dssp -----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEE--CGGGHHHHHHH
T ss_pred -----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeC--CCchHHHHHHH
Confidence 12 12 677888863 221110 0 0011 2367777776 46899999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHhhccccCC--CCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGRFGT--LTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey-~~l~~~l~~lv~~IN~~~g~--~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
+.++.+++|+++ |+++|. +++. ++++ +++.+.+-.+.. .+...|. +.+. .+++..+|+.||
T Consensus 216 ~~~l~~~~p~~~----lvivG~-----g~~~~~~l~----~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~aD 279 (374)
T 2xci_A 216 FKEIKKTYSSLK----LILVPR-----HIENAKIFE----KKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVGK 279 (374)
T ss_dssp HHHHHTTCTTCE----EEEEES-----SGGGHHHHH----HHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGEE
T ss_pred HHHHHhhCCCcE----EEEECC-----CHHHHHHHH----HHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhCC
Confidence 999988888764 887873 3433 2444 444433321100 0001243 4443 378999999999
Q ss_pred EEEEcCC-CcCCChhHHHHHhhccCCCceEEEe-CCCCchhhc---cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 462 VALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 462 v~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
++++||. .|++|++++|||||| .|+|++ +.+|+.+.+ +.+|.++.|.|++++|++|.++|+. +.+++++
T Consensus 280 v~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg 353 (374)
T 2xci_A 280 IAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVE 353 (374)
T ss_dssp EEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHH
T ss_pred EEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHH
Confidence 9888764 577899999999994 788876 556666654 2578899999999999999999985 5777788
Q ss_pred HHhhHHHhhC
Q 005855 537 WHNFTHVTTH 546 (673)
Q Consensus 537 ~~~~~~v~~~ 546 (673)
++++++++++
T Consensus 354 ~~ar~~~~~~ 363 (374)
T 2xci_A 354 EKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888887654
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.9e-15 Score=159.09 Aligned_cols=249 Identities=14% Similarity=0.010 Sum_probs=160.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.....+...++. +..++++.+..|..+|..- ...+ ...+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~-~~~~~p~v~~~~~~~~~~~--------~~~~--~~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAA-WSLGIPVVLHEQNGIAGLT--------NKWL--AKIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHH-HHTTCCEEEEECSSSCCHH--------HHHH--TTTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHH-HHcCCCEEEEecCCCCcHH--------HHHH--HHhCCEEEecChh-------------
Confidence 35999999754333222333 3346778888887654310 1111 1235655432210
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCc-eEEEeecccccCChHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRK-VMLGVDRLDMIKGIPQKLLAFEKF 388 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-iIl~VgRLd~~KGi~~~L~Af~~l 388 (673)
. +. ++.++|+|||.+.|.+. . .. +.+ .. .+++ +++++||+.+.||++.+++|++.+
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~---~-~~---~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l 209 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP---L-PQ---QRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKL 209 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC---C-HH---HHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc---h-hh---hhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHh
Confidence 0 11 45689999999877531 1 10 111 11 2445 455667999999999999999987
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC
Q 005855 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (673)
Q Consensus 389 l~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (673)
.+ ++.++.++++ ++ ++++ ++++.+.+. ..|.+ .|.+ +++..+|+.||++|+||
T Consensus 210 ~~-------~~~~l~i~G~----~~-~~~l----~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 210 GD-------SVTIWHQSGK----GS-QQSV----EQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp GG-------GEEEEEECCT----TC-HHHH----HHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEECC-
T ss_pred cC-------CcEEEEEcCC----ch-HHHH----HHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEECC-
Confidence 43 2443333322 22 2333 334433221 13554 4666 78999999999999999
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCCch-------hhc--cCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
| +++++|||+|| .|+|+|..+|.. +.+ ...|++++|.| ++++|++|.++ .++.+.++.+
T Consensus 263 --g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 263 --G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 99999999995 899999988763 234 33599999988 99999999988 4667777778
Q ss_pred HhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
++++.+.+++++.-++.+++.+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARAL 357 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHH
Confidence 8888888887777777776666543
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-12 Score=140.51 Aligned_cols=263 Identities=15% Similarity=0.133 Sum_probs=162.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+++..+ +|+|++|+.-...++..+..+..++|++.+ |.+..+...+. ++.+++.+-+ ..+|++...+....++|
T Consensus 106 ~l~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h~-~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l 181 (396)
T 3dzc_A 106 VLSSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGHV-EAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANL 181 (396)
T ss_dssp HHHHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHH
T ss_pred HHHhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEEE-ECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHH
Confidence 334445 499999986666666555555667887643 33332322221 3444555544 36899988888877776
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhc----CCce-EEEeecccc-c
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA----GRKV-MLGVDRLDM-I 375 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~----~~~i-Il~VgRLd~-~ 375 (673)
.+ .|.+ ..+|.++++ ++|...+.+... ........+++++++ ++++ ++..+|... .
T Consensus 182 ~~-----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~ 244 (396)
T 3dzc_A 182 LQ-----ENYN-----------AENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHRRESFG 244 (396)
T ss_dssp HH-----TTCC-----------GGGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT
T ss_pred HH-----cCCC-----------cCcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCcccch
Confidence 53 2322 235677776 456443322110 000011245666553 3454 446678654 4
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHH
Q 005855 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (673)
Q Consensus 376 KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 455 (673)
|++..+++|++.+.+++|++ .+++++.+ .+ .+++.++++.+ . ...|+ +.+.++..++..
T Consensus 245 ~~~~~ll~A~~~l~~~~~~~----~~v~~~g~----~~---~~~~~l~~~~~-------~--~~~v~-~~~~lg~~~~~~ 303 (396)
T 3dzc_A 245 GGFERICQALITTAEQHPEC----QILYPVHL----NP---NVREPVNKLLK-------G--VSNIV-LIEPQQYLPFVY 303 (396)
T ss_dssp THHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHTT-------T--CTTEE-EECCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCc----eEEEEeCC----Ch---HHHHHHHHHHc-------C--CCCEE-EeCCCCHHHHHH
Confidence 88999999999999888874 35544322 13 23444444321 1 12455 457888889999
Q ss_pred HHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-CCCCchhhcc-CceEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 005855 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEERE 533 (673)
Q Consensus 456 ly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 533 (673)
+|+.||++|.+| | |++ +|||+|+ .|+|++ +.++..+.+. ..+++|++ |.++++++|.++|+.+ +.++
T Consensus 304 l~~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~-~~~~ 372 (396)
T 3dzc_A 304 LMDRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP-QAYQ 372 (396)
T ss_dssp HHHHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH-HHHH
T ss_pred HHHhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999 6 666 9999995 888888 5555555441 24677765 8999999999999864 3444
Q ss_pred HHHHHhh
Q 005855 534 KRHWHNF 540 (673)
Q Consensus 534 ~r~~~~~ 540 (673)
++.++..
T Consensus 373 ~m~~~~~ 379 (396)
T 3dzc_A 373 AMSQAHN 379 (396)
T ss_dssp HHHTSCC
T ss_pred HHhhccC
Confidence 4444333
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.41 E-value=9e-12 Score=136.14 Aligned_cols=260 Identities=14% Similarity=0.123 Sum_probs=158.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhh--cCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~F 302 (673)
+.+..+| |+|++|+.-...++..+..+..++|++. ++.+.-+...++ |+.+++.+.+. .+|++...+..+.++|
T Consensus 109 ~l~~~kP-D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l 184 (403)
T 3ot5_A 109 VIAAENP-DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENL 184 (403)
T ss_dssp HHHHHCC-SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcCC-CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHH
Confidence 3344454 9999998655555544444456788753 333332222222 23344444432 3788888888887777
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhcC-CceEEEeecccc-cCChH
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDM-IKGIP 379 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~-~KGi~ 379 (673)
.+ .|.+ ..+|.++++ ++|...+........ ..++++.+ +.+++.++|... .|++.
T Consensus 185 ~~-----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 185 LA-----EGKD-----------PATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp HH-----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHH
T ss_pred HH-----cCCC-----------cccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHH
Confidence 53 2322 345677765 567654432110000 11222233 345667888754 47899
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 005855 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (673)
Q Consensus 380 ~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (673)
.+++|+..+.+++|++ .++.++.+ .+ .+++.+++..+. +..|+ +.++++..++..+|+.
T Consensus 243 ~ll~a~~~l~~~~~~~----~~v~~~~~----~~---~~~~~l~~~~~~---------~~~v~-l~~~l~~~~~~~l~~~ 301 (403)
T 3ot5_A 243 GMFEAVREIVESREDT----ELVYPMHL----NP---AVREKAMAILGG---------HERIH-LIEPLDAIDFHNFLRK 301 (403)
T ss_dssp HHHHHHHHHHHHCTTE----EEEEECCS----CH---HHHHHHHHHHTT---------CTTEE-EECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCc----eEEEecCC----CH---HHHHHHHHHhCC---------CCCEE-EeCCCCHHHHHHHHHh
Confidence 9999999999988874 35544332 12 234444443211 12455 4578888999999999
Q ss_pred cCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-CCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 460 ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
||++|.+| |-+.+||++|+ .|+|++ +.++..+.+ ..+|++|++ |.++++++|.++|+.+ +.++++.+
T Consensus 302 ad~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~~ 370 (403)
T 3ot5_A 302 SYLVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMAQ 370 (403)
T ss_dssp EEEEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHHH
T ss_pred cCEEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHHh
Confidence 99999888 33449999995 888888 555554544 237888876 9999999999999864 34444444
Q ss_pred HhhHH
Q 005855 538 HNFTH 542 (673)
Q Consensus 538 ~~~~~ 542 (673)
....+
T Consensus 371 ~~~~~ 375 (403)
T 3ot5_A 371 AANPY 375 (403)
T ss_dssp SCCTT
T ss_pred hcCcc
Confidence 43333
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-08 Score=109.24 Aligned_cols=244 Identities=12% Similarity=0.042 Sum_probs=151.6
Q ss_pred HHHHhcCCCCEEEEeCccch--hH-HHHHHhh-CCCCeEEeEeccCCCchhhhhcCCcc-hHHHHhhhcCCEEEEeCHHH
Q 005855 224 VVNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDY 298 (673)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~--ll-p~~Lr~~-~~~~~Ig~flH~PfP~~e~fr~lp~r-~~il~~ll~aDlIgF~t~~~ 298 (673)
.+....+++|+|+++-..+. .+ ..+++.. ..++++.+..|--+|-.- ..-+.. ..-...+..||.|..+++..
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 35556788999999876652 22 2334432 238999999997665221 000000 11123356899999999876
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCC
Q 005855 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 377 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KG 377 (673)
.+.+.+ .|.. ..++. +.++ |... + .+. ....++++|+++||+....+
T Consensus 145 ~~~l~~-----~G~~-----------~~ki~--~~~~~~~~~--~---~~~---------~~~~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 145 IDKLRD-----FGMN-----------VSKTV--VQGMWDHPT--Q---APM---------FPAGLKREIHFPGNPERFSF 192 (339)
T ss_dssp HHHHHH-----TTCC-----------CSEEE--ECCSCCCCC--C---CCC---------CCCEEEEEEEECSCTTTCGG
T ss_pred HHHHHH-----cCCC-----------cCcee--ecCCCCccC--c---ccc---------cccCCCcEEEEeCCcchhhH
Confidence 655432 1321 12343 3333 2110 0 000 01134688999999985322
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHH
Q 005855 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (673)
Q Consensus 378 i~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (673)
+. + + .|+ +.|+++|.+. +. + .+ .|+| .|.++.+|++.+|
T Consensus 193 L~----~---l---~~~----~~f~ivG~G~-----~~------------~-------l~--nV~f-~G~~~~~el~~~l 231 (339)
T 3rhz_A 193 VK----E---W---KYD----IPLKVYTWQN-----VE------------L-------PQ--NVHK-INYRPDEQLLMEM 231 (339)
T ss_dssp GG----G---C---CCS----SCEEEEESCC-----CC------------C-------CT--TEEE-EECCCHHHHHHHH
T ss_pred HH----h---C---CCC----CeEEEEeCCc-----cc------------C-------cC--CEEE-eCCCCHHHHHHHH
Confidence 11 1 1 344 4588898532 10 0 11 3665 6899999999999
Q ss_pred HHcCEEEEcCCCcC---------CChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 458 AVTDVALVTSLRDG---------MNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 458 ~~ADv~vv~Sl~EG---------f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
+.||+.++. .++ ++....|||||| .|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 232 ~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l-- 301 (339)
T 3rhz_A 232 SQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV-- 301 (339)
T ss_dssp HTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC--
T ss_pred HhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh--
Confidence 999999987 233 467899999995 899999999888888 46789987 578888888753
Q ss_pred CCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 527 MSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 527 m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
.++++.++.+++++..++.+.....+
T Consensus 302 -~~~~~~~m~~na~~~a~~~~~~~f~k 327 (339)
T 3rhz_A 302 -NEDEYIELVKNVRSFNPILRKGFFTR 327 (339)
T ss_dssp -CHHHHHHHHHHHHHHTHHHHTTHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 46677777777777765544334433
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.88 E-value=5e-08 Score=105.90 Aligned_cols=245 Identities=10% Similarity=0.052 Sum_probs=142.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+.+..+| |+|++|+.-...++ .+.....++|++. ++.+.-+.+. ++.+++.+-+ ..+|++...+....++|
T Consensus 89 ~l~~~kP-D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~~----~~pee~nR~~~~~~a~~~~~~te~~~~~l 161 (385)
T 4hwg_A 89 VLEKEKP-DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFDQ----RVPEEINRKIIDHISDVNITLTEHARRYL 161 (385)
T ss_dssp HHHHHCC-SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSCT----TSTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHhcCC-cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCccccc----cCcHHHHHHHHHhhhceeecCCHHHHHHH
Confidence 3444454 99999985544445 4444445678754 3333322111 2223343333 24788877888777777
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhc---CCceEEEeeccc---cc
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MI 375 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd---~~ 375 (673)
.+ .|.+ ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..
T Consensus 162 ~~-----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~ 219 (385)
T 4hwg_A 162 IA-----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVK 219 (385)
T ss_dssp HH-----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----C
T ss_pred HH-----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcH
Confidence 53 2322 235566654 56643332100 01123445553 344556778854 44
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHH
Q 005855 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (673)
Q Consensus 376 KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 455 (673)
|++..+++|+..+.+++ ++ .+|... .|. +++.++++. +- .+ ....|+ +.+.++..++..
T Consensus 220 ~~l~~ll~al~~l~~~~-~~----~vv~p~------~p~---~~~~l~~~~---~~-~~--~~~~v~-l~~~lg~~~~~~ 278 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEY-NF----LIIFST------HPR---TKKRLEDLE---GF-KE--LGDKIR-FLPAFSFTDYVK 278 (385)
T ss_dssp HHHHHHHHHHHHHHHHH-CC----EEEEEE------CHH---HHHHHHTSG---GG-GG--TGGGEE-ECCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-Ce----EEEEEC------ChH---HHHHHHHHH---HH-hc--CCCCEE-EEcCCCHHHHHH
Confidence 78999999999987765 43 243322 132 233333220 10 00 112455 567888889999
Q ss_pred HHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC-chhhc-cCceEEECCCCHHHHHHHHHHHhcCCH
Q 005855 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMSP 529 (673)
Q Consensus 456 ly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG-~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (673)
+|+.||+++..| |.+..||++++ .|+|+..... ..+.+ ..++++|++ |.+++++++.++|+.+.
T Consensus 279 l~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 279 LQMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCB
T ss_pred HHHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChH
Confidence 999999999887 45679999995 7777765433 33444 235677754 99999999999998653
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.64 E-value=5.9e-06 Score=96.19 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=106.4
Q ss_pred CCceEEEeecccccCChHHH-HHHHHHHH--HhCcCccC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~-L~Af~~ll--~~~P~~~~-~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||.... +..+++++ ..+|+..- .+++|..|....++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56889999999999999998 88888885 35664321 36777666544333 3334566678888888864211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhh----cc-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~----lg-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+|||++.||. .|.-|+.-+=||.- |.|-+|..-|+..+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 22477665 4466666788999999999999 99999999999986 66666776676533 34 5799998
Q ss_pred CCCHHHHHHHH
Q 005855 511 PWNITEVANAI 521 (673)
Q Consensus 511 P~D~~~lA~aI 521 (673)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 76 6666 444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=3e-07 Score=106.62 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=107.6
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll~--~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||... ++..++++++ .+|+.. ..+++|..|....++ ...+.+-+.+.+++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8999888865 355411 247787666544333 2334556667788777774211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----c-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 22477654 4566666788999999999999 99999999999986 566668887777655 5 5899998
Q ss_pred CCCHHHHHH
Q 005855 511 PWNITEVAN 519 (673)
Q Consensus 511 P~D~~~lA~ 519 (673)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 7 7777663
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=5e-07 Score=97.18 Aligned_cols=158 Identities=15% Similarity=0.047 Sum_probs=103.1
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+..+++++|++. .|+...+..+++.+.+ .+ +.+++++++.. ... .+ ++ + . ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~g~~~-~~~---~l----~~----~------~--~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-LD-----ADVLVASGPSL-DVS---GL----GE----V------P--ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-SS-----SEEEEECCSSC-CCT---TC----CC----C------C--TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-CC-----CEEEEEECCCC-Chh---hh----cc----C------C--CcE
Confidence 345678899996 6777666666666533 22 23444443221 000 11 00 0 0 135
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--C
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~--D 513 (673)
.+ .+.++ +..+|+.||++|.+|- ..+++|||+|+ .|+|+....+ .++.+ +..|+++++. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 56664 7789999999997762 36899999995 8888865543 45555 3579999987 9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+++++++|.++|+++ +.++.+.+..++....++...-++.+.+.+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 455666666677777777777666555443
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.59 E-value=4.7e-06 Score=96.65 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=107.6
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll~--~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||... ++..++++++ ++|+.. ..+++|..|....++ ...+.+-+.+.+++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5788999999999999999 8999998875 566421 247787666544333 2334556667788777775211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----c-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 22477665 4466666788999999999999 99999999999986 556667777777554 5 5899997
Q ss_pred C--CCHHHHHH
Q 005855 511 P--WNITEVAN 519 (673)
Q Consensus 511 P--~D~~~lA~ 519 (673)
. .++.++-.
T Consensus 668 ~~~~ev~~l~~ 678 (796)
T 2c4m_A 668 ARVEELPALRE 678 (796)
T ss_dssp CCTTTHHHHHH
T ss_pred CchhhHHHHHH
Confidence 6 56655543
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.5e-06 Score=92.94 Aligned_cols=155 Identities=11% Similarity=0.031 Sum_probs=101.6
Q ss_pred CceEEEeecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi-~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+.+++++|++...|+. ..+++++... ++.|++ .+++++++ ++...+ . .+ . ..|
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~----~~v~~~~~-----~~~~~l----~----~~------~--~~v 272 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGV----EAVIAVPP-----EHRALL----T----DL------P--DNA 272 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE----EEEEECCG-----GGGGGC----T----TC------C--TTE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe----EEEEEECC-----cchhhc----c----cC------C--CCE
Confidence 4567788999886655 8888888877 777754 36655432 111111 1 00 0 134
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC----CCchhhc--cCceEEECC----
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP---- 511 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP---- 511 (673)
+ +.+.++..+ ++..||++|. .|-..+.+|||+|| .|+|+.-. .+.++.+ +..|+++++
T Consensus 273 ~-~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 340 (391)
T 3tsa_A 273 R-IAESVPLNL---FLRTCELVIC----AGGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQ 340 (391)
T ss_dssp E-ECCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHH
T ss_pred E-EeccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCccccc
Confidence 4 467777654 4599999995 44457889999995 78887433 3344444 357899998
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHH
Q 005855 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (673)
.|.++++++|.++|+++. .++.+.+..++..........++.+.
T Consensus 341 ~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 341 SDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp TCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999764 44444455555566666666555443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.6e-06 Score=90.37 Aligned_cols=100 Identities=16% Similarity=0.061 Sum_probs=66.1
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe----CCCCchhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS----e~aG~~~~l--g~~gllVnP~-- 512 (673)
|. +.+.++ ...++..||++|. .|-+.+..|||+|| .|+|+. +..+.++.+ ...|+++++.
T Consensus 286 v~-~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VL-AAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EE-EESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EE-EeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 55 356776 4567888999994 45577899999995 788884 333555555 3568999887
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
|.++++++|.++|+.+. .+..+.+..++..........++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78999999999999764 44444455555556666555444
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.2e-05 Score=91.52 Aligned_cols=171 Identities=9% Similarity=-0.050 Sum_probs=107.7
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE-EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq-vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
..++.+..|+ .|..+..++++.+++++.|+. +.++. +|. . .+.+. .+.+++.+. .|. ..+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~-~--~g~~~-~~~~~~~~~--GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ-S--NGITH-PYVERFIKS--YLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS-C--CGGGH-HHHHHHHHH--HHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC-C--chhhH-HHHHHHHHc--CCC--------ccE
Confidence 4456667775 699999999999999999963 22222 331 1 22222 222232221 222 135
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--------cCceEEECCCC
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWN 513 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--------g~~gllVnP~D 513 (673)
. |.+.++.++..++|+.|||||.|+.+.| |++++|||+|| .|+|.....+.+.-+ |-..++| ..|
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 5 4688999999999999999999998877 99999999994 666664444333222 3333223 247
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh---CCHHHHHHHHHHHHHHh
Q 005855 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDT 562 (673)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~~ 562 (673)
.++.+++..++.++++ .+....+++++...+ ++ .|.+.|-+.++.+
T Consensus 575 ~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 9999999999988754 555555555554322 22 3445554444443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.09 E-value=9.9e-05 Score=78.99 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=87.4
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
.+++..|++...+.-..+++|++.+... .++.++.+++. ..++.+.+... ..+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGR-----QHAEITAERYR----TVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCT-----TTHHHHHHHHH----HTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCc-----cccccccceec----cccc--------cccc
Confidence 3455557887766666666776655322 12334444322 12333333332 2221 1232
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch--------hhc--cCceEEECCC-
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL--GAGAILVNPW- 512 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~--------~~l--g~~gllVnP~- 512 (673)
.+++ +++..+|+.||++|..+ | +.++.|+|+++ .|.|+..+.++. +.+ ...|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 2343 46889999999999654 4 67889999995 788877665432 223 1347788755
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
++++++++|.++|++++ .++++.+++++....+
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLAKPE 342 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCTT
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCcc
Confidence 58999999999999874 5555556665554443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.95 E-value=3.4e-05 Score=83.57 Aligned_cols=102 Identities=13% Similarity=-0.026 Sum_probs=70.9
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
|.+ .+.+++. .+|+.||++|..+ |. .+.+|||+|| .|+|+....| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 554 5777765 6899999998865 33 6899999995 8888887654 23333 3468999887
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (673)
|.++++++|.++|+.+ +.++++.+..++....++....++.+
T Consensus 353 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 394 (430)
T 2iyf_A 353 TADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLI 394 (430)
T ss_dssp CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 8999999999999854 34444444445555555545544444
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.95 E-value=1e-05 Score=81.45 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=49.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||.+...+| ....++++++++|++|.+.. .|+|+|||+...+..++..+
T Consensus 2 kli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~g--~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKERF--DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHHS--EEEEECSSCHHHHHHHSCSS
T ss_pred eEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhcCC--CEEEEeCCCHHHHHHHhccc
Confidence 689999999999865433 34567899999999999875 99999999999999998775
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.80 E-value=7.6e-05 Score=70.37 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=83.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~VgRLd---~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
...+++++|++. +.|++..+++|+..+ + ..++.++++.. .+ .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-----~~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-----QKVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-----SEEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-----CeEEEEECCcC---cc-------------cC----C----
Confidence 356888999995 677888888887542 2 23444443221 00 01 0
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~ 512 (673)
..|+ +.+.+++.++.++ ..||++|.. |-+.++.|+|+|+ .|+|+....+ .++.+ ...|+.+++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1355 4578888766553 999999974 3358999999995 8888887642 23333 2468888876
Q ss_pred --CHHHHHHHHHHHhcCC
Q 005855 513 --NITEVANAIARALNMS 528 (673)
Q Consensus 513 --D~~~lA~aI~~aL~m~ 528 (673)
+.++++++|.++|+.+
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=3.7e-05 Score=78.22 Aligned_cols=60 Identities=25% Similarity=0.304 Sum_probs=45.3
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+|+..+.+||++|+||||.+. ....+++.+++|++|.+ . ..|+|.|||+...+.+.++.
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~ 65 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGD 65 (262)
T ss_dssp -------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSS
T ss_pred ccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhh
Confidence 4567777899999999999974 22357899999999965 4 89999999999988888864
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00055 Score=72.76 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=86.7
Q ss_pred CceEEEeeccccc-------CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCC
Q 005855 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (673)
Q Consensus 363 ~~iIl~VgRLd~~-------KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~ 435 (673)
..+++++|++... +.+..+++|++++ + +.++++++ .++. ++++.+ .
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g-----~~~~----~~l~~~----~----- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAP-----DTVA----EALRAE----V----- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECC-----HHHH----HHHHHH----C-----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeC-----CCCH----HhhCCC----C-----
Confidence 4578899999875 5677778887642 2 33554432 1222 122221 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEE
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllV 509 (673)
..|. + +.++.. .+|..||+||..+ | ..+..|||+|| .|+|+....+ .++.+ ...|+++
T Consensus 264 ---~~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 264 ---PQAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ---TTSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ---CceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 0244 4 677654 5679999999863 3 46899999995 8888887643 33333 2468888
Q ss_pred CCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 510 nP~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
++. +.++++++|.++|+.+ +.++++.+..+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 875 7999999999999864 33344444444443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.57 E-value=9.4e-05 Score=74.25 Aligned_cols=54 Identities=26% Similarity=0.388 Sum_probs=45.6
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+.++|++|+||||... ....+++.+++|++|.+. ..|+|+|||+...+.+.++
T Consensus 4 ~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~ 57 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQK--IKIGVVGGSDFEKVQEQLG 57 (246)
T ss_dssp CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHC
T ss_pred CCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHhC--CeEEEEcCCCHHHHHHHhc
Confidence 45789999999999974 223578999999999764 8999999999998888887
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00011 Score=75.43 Aligned_cols=62 Identities=19% Similarity=0.288 Sum_probs=46.2
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+|...+.++++||+||||... ....++++.++|++|.+. ...|+|+|||+...++..+..+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l 75 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNL 75 (285)
T ss_dssp -------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHH
T ss_pred cccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 4688899999999999999974 234678999999999764 7899999999998888777543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00021 Score=72.27 Aligned_cols=54 Identities=20% Similarity=0.211 Sum_probs=46.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+++++|+||||.+.. ...+++++++|++|.+. ...|+|+|||+...+.+.|+.
T Consensus 4 ~kli~~DlDGTLl~~~--------------~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~ 57 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR--------------LCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGR 57 (246)
T ss_dssp SEEEEECSBTTTBSTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCT
T ss_pred ceEEEEeCcCCcCCCC--------------CccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhh
Confidence 5899999999999742 34678999999999985 589999999999999999884
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00033 Score=71.82 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=49.7
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..|...+-++|++|+||||.... ....++++.++|++|.+. ...|+++|||+...++..+..+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~ 77 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFAPIK 77 (283)
T ss_dssp -----CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTGGGG
T ss_pred hhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcC
Confidence 45778888999999999999642 114678999999999875 68999999999999998887654
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0027 Score=69.04 Aligned_cols=150 Identities=11% Similarity=0.000 Sum_probs=87.6
Q ss_pred CceEEEeeccccc-----CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 363 ~~iIl~VgRLd~~-----KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
..++++.|++... |.+..+++|+..+ + +.+++++++. +...+ . . . .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~----~~~v~~~g~~-----~~~~l----~----~----~--~- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D----AEIIATFDAQ-----QLEGV----A----N----I--P- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----S----SEEEECCCTT-----TTSSC----S----S----C--C-
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----C----CEEEEEECCc-----chhhh----c----c----C--C-
Confidence 3577899999764 8888889988643 2 2344443211 11000 0 0 0 0
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP 511 (673)
..|. +.+.+++. .+|..||++|.. -| ..+..|+|+++ .|+|+..+.+ .++.+ ...|+.+++
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1344 46788864 457999999973 33 56899999995 8888887743 23333 246888887
Q ss_pred C--CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHH
Q 005855 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (673)
Q Consensus 512 ~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (673)
. +.++++++|.++|+.+ +.++.+.+...+.........-++.+
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 430 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHRAGAARMRDDMLAEPSPAEVVGIC 430 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5 8999999999999864 23333333333334444444444433
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0016 Score=69.03 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=68.8
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC-C----Cchhhc--cCceEEECCC-
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-A----GAAQSL--GAGAILVNPW- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-a----G~~~~l--g~~gllVnP~- 512 (673)
++ +.+.++.. .++..||++|..+- ..+.+|+|++| .|+|+.-. . +.++.+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHGT----TGAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECCC----HHHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECCC----HHHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 44 35677765 88999999997763 25779999995 77775543 2 334444 3468888876
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
|.++++++|.++|+++. .+....+...+.........-++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADSA-VRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 89999999999998642 33333333333344445555555444443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00035 Score=71.71 Aligned_cols=56 Identities=18% Similarity=0.311 Sum_probs=45.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++|++|+||||.+. ...++++.+++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~~~l~ 60 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELH 60 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTT
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhC
Confidence 379999999999974 234678999999999865 67899999999998887776543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00045 Score=70.25 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=43.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||... ....+++.+++|++ .+....|+|+|||+...+...+..+
T Consensus 3 kli~~DlDGTLl~~--------------~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l 55 (268)
T 1nf2_A 3 RVFVFDLDGTLLND--------------NLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKY 55 (268)
T ss_dssp CEEEEECCCCCSCT--------------TSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHH
T ss_pred cEEEEeCCCcCCCC--------------CCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHh
Confidence 68999999999974 22457889999999 4557899999999999888877654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00049 Score=70.45 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=44.1
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+.++|++|+||||.... ...+++.+++|++|.+. ...|+|+|||+...+...+..+
T Consensus 8 ~~~li~~DlDGTLl~~~--------------~~~~~~~~~~l~~l~~~-G~~~~iaTGR~~~~~~~~~~~l 63 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTL 63 (275)
T ss_dssp CCEEEEEECTTTTSCSS--------------CCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHT
T ss_pred CceEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHc
Confidence 35899999999999742 12335678999999764 6789999999999988887654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00042 Score=69.05 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=45.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||.+. ...++++.+++|++|.+. ...|+|+|||+...++..+..+
T Consensus 6 kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l 59 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFL 59 (227)
T ss_dssp CEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHh
Confidence 79999999999974 224678999999999864 6789999999999888887654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00061 Score=70.82 Aligned_cols=53 Identities=13% Similarity=0.258 Sum_probs=43.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVL 657 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~ 657 (673)
-++|++|+||||.+.. ....+++.+++|++|.+. ...|+|+|||+...+..++
T Consensus 27 ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp CCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHH
T ss_pred ccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHh
Confidence 4799999999999741 223578999999999865 6789999999999888777
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00054 Score=69.67 Aligned_cols=56 Identities=13% Similarity=0.151 Sum_probs=44.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChh-HHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-+++++|+||||.... ...+++ ++++|++|.+. ...|+|+|||+...+...+..+.
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 59 (271)
T 1rlm_A 3 VKVIVTDMDGTFLNDA--------------KTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELK 59 (271)
T ss_dssp CCEEEECCCCCCSCTT--------------SCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTT
T ss_pred ccEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHhcC
Confidence 3699999999999742 234566 58999999763 57899999999999988876653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00065 Score=67.43 Aligned_cols=54 Identities=13% Similarity=0.220 Sum_probs=44.2
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+++++|+||||++.. ...++++.++|++|.+. ...|+++|||+...++..+..+
T Consensus 4 kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l 57 (231)
T 1wr8_A 4 KAISIDIDGTITYPN--------------RMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILI 57 (231)
T ss_dssp CEEEEESTTTTBCTT--------------SCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHc
Confidence 689999999999742 24578999999999765 6889999999998887776543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00083 Score=68.10 Aligned_cols=56 Identities=16% Similarity=0.263 Sum_probs=46.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||... ....+++..++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 60 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELR 60 (279)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhC
Confidence 479999999999974 234678999999999876 68999999999998888776543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0031 Score=67.41 Aligned_cols=151 Identities=11% Similarity=0.007 Sum_probs=88.2
Q ss_pred CCceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRLd~~-KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
...+++++|++... |+...+..+++.+.+ . + +.+++++++. +.. .+ . .+ . ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~----~~~v~~~g~~--~~~---~l----~----~~------~--~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-D----ADFVLALGDL--DIS---PL----G----TL------P--RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-S----SEEEEECTTS--CCG---GG----C----SC------C--TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-C----CEEEEEECCc--Chh---hh----c----cC------C--Cc
Confidence 35677789999654 355444444444432 2 2 3455555432 110 11 0 00 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEE----eCCCCch--hhc--cCceEEECCC
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVl----Se~aG~~--~~l--g~~gllVnP~ 512 (673)
|.+ .+.++.. .++..||++|.. |-..+..|||++| .|+|+ .+-.+.+ +.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 553 5677644 577889999953 4456889999995 78887 5556666 666 3568888876
Q ss_pred --CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHH
Q 005855 513 --NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (673)
Q Consensus 513 --D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (673)
+.+.++ ++|+++ +.++.+.+..++......+...++.+.
T Consensus 353 ~~~~~~l~----~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (398)
T 3oti_A 353 KVDADLLR----RLIGDE-SLRTAAREVREEMVALPTPAETVRRIV 393 (398)
T ss_dssp GCCHHHHH----HHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCCHHHHH----HHHcCH-HHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 555555 777753 345554455555566666666555443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0011 Score=61.55 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=43.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC---HHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~---~~~L~~~~~~~ 660 (673)
.+++++|+||||.... .+ ....+.+.++++|++|.+. ...|+|+|||+ ...+..|+...
T Consensus 3 ~k~i~~DlDGTL~~~~-~~---------~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~~~~~~~~~l~~~ 64 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRAR 64 (142)
T ss_dssp CCEEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred CeEEEEECcCCCCCCC-Cc---------cccccCHHHHHHHHHHHHC-CCEEEEEeCCCcccHHHHHHHHHHc
Confidence 4689999999999742 11 1123456899999999864 68999999998 56667776553
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0093 Score=63.78 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=67.6
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC----CCchhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP~-- 512 (673)
+.+ .+.++.. .++..||++|..+ |. .+..|++++| .|+|+--. ...++.+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 553 4777765 7889999999765 32 5779999995 77777433 2233334 2457888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+.++++++|.++|+++. .+..+.+...+..........++.+.+.+
T Consensus 367 ~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADPA-LLARVEAMRGHVRRAGGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 89999999999998642 33333333333344455555555444433
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00094 Score=67.71 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=38.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++|+||+||||... ....+++..++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 60 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYLDAMD 60 (279)
T ss_dssp CCEEEECC-------------------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred eEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcC
Confidence 478999999999974 234678999999999875 68999999999999988886653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0013 Score=67.12 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=45.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-++++||+||||... ....+++..++|++|.+. ...|+++|||+...++..+..+
T Consensus 6 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~ 60 (290)
T 3dnp_A 6 KQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSL 60 (290)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHc
Confidence 479999999999974 234678999999999875 6889999999998887776544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0015 Score=67.57 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=46.4
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChh-HHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.-++|+||+||||.... ...+++ +.++|++|.+. ...|+++|||+...++..+..+.
T Consensus 36 ~iKli~fDlDGTLld~~--------------~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 93 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSK--------------GSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFPDCH 93 (304)
T ss_dssp CCSEEEECCCCCCSCTT--------------SCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCTTTG
T ss_pred eeEEEEEeCCCCCCCCC--------------CccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhC
Confidence 35899999999999742 234566 88999999875 68999999999999998887654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0011 Score=66.61 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=40.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||. . . . .+ ++++++|++|.+. ...|+|+|||+...+...+..+
T Consensus 3 kli~~DlDGTLl-~-~-~------------~~-~~~~~~l~~l~~~-g~~~~i~Tgr~~~~~~~~~~~~ 54 (249)
T 2zos_A 3 RLIFLDIDKTLI-P-G-Y------------EP-DPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKEL 54 (249)
T ss_dssp EEEEECCSTTTC-T-T-S------------CS-GGGHHHHHHHHHT-TEEEEEBCSSCHHHHHHHHHHH
T ss_pred cEEEEeCCCCcc-C-C-C------------Cc-HHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 689999999999 3 1 1 12 3488999999764 6889999999999888877653
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0011 Score=66.63 Aligned_cols=56 Identities=18% Similarity=0.294 Sum_probs=45.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||.... ...++...++|++|.+. ...|+++|||+...++..+..++
T Consensus 5 ~kli~fDlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~ 60 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEV--------------YGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDVLSLG 60 (274)
T ss_dssp CCEEEECSBTTTBBTT--------------TBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHHHTTC
T ss_pred ceEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcC
Confidence 4789999999999742 24678999999999765 68999999999988877775543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.001 Score=67.08 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=41.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
+++++|+||||.... ....+++.+++|++|.+. ...|+++|||+ ..+...+..
T Consensus 3 kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~~~~ 55 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINNLSE 55 (261)
T ss_dssp CEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCSCHH
T ss_pred cEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHHHHH
Confidence 689999999999742 122678999999999874 57899999999 877655543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0021 Score=64.72 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=40.9
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
+++||+||||... . ..++.+.++|++|.+. ...|+++|||....++ .++
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~-~l~ 50 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRAL-GVPVVPVTAKTRKEVE-ALG 50 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHHT-TCCEEEBCSSCHHHHH-HTT
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHH-HcC
Confidence 7999999999964 2 4567889999999864 6789999999999998 554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0025 Score=64.09 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=43.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-++++||+||||.... ....+++..++|++|.+. ...|++.|||+...+ ..+..+
T Consensus 12 iKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~-~~~~~l 66 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHDS-GIKIVIATGRAASDL-HEIDAV 66 (268)
T ss_dssp CCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCC-GGGTTS
T ss_pred eEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHh-HHHHhc
Confidence 4899999999999631 234578999999999876 689999999998877 344433
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0036 Score=64.14 Aligned_cols=54 Identities=15% Similarity=0.262 Sum_probs=44.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+++++|+||||.... ...++..+++|++|.+. ...|+++|||+...+...+...
T Consensus 5 kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l 58 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSK--------------HQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPL 58 (288)
T ss_dssp CEEEEECCCCCSCTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGG
T ss_pred EEEEEeCCCCCCCCC--------------CccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 689999999999742 23568899999998864 5788999999999988887654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0048 Score=58.89 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=48.4
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccc-----------cccccCCChhHHHHHHHHhcCCCCeEEEEcCCC-HHhHH
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLD 654 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~-----------~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~-~~~L~ 654 (673)
.....++++||+||||.+..... ..+... ......+.+.+.++|+.|.+. ...++|+||++ ...++
T Consensus 23 m~~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~ 100 (187)
T 2wm8_A 23 MARLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGAN 100 (187)
T ss_dssp HHTSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHH
T ss_pred HHhccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHH
Confidence 33445799999999998642110 000000 012356789999999999874 56899999999 68777
Q ss_pred HHhcccc
Q 005855 655 KVLDLVL 661 (673)
Q Consensus 655 ~~~~~~~ 661 (673)
.++....
T Consensus 101 ~~l~~~g 107 (187)
T 2wm8_A 101 QLLELFD 107 (187)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 7766543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.14 Score=54.90 Aligned_cols=146 Identities=10% Similarity=-0.013 Sum_probs=84.9
Q ss_pred CCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRLd-~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.+.++++.|++. ..+.+...++|++.+ +++ +|.++++...+. . +.. ..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~~----------------~----~~~--~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLGR----------------I----DEG--DD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCCC----------------S----SCC--TT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCccccc----------------c----cCC--CC
Confidence 456777889998 666677777777653 222 343332211000 0 000 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch----hhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~----~~l--g~~gllVnP~-- 512 (673)
+.+ .+.++.. .++..||++|..+ |. .+..|++++| .|+|+--+.+-- ..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~---~ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQ---VLFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHH---HHGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHH---HHHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 443 4677765 4667999999655 32 5778999995 777776554321 112 1356777653
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
+.++++++|.++|+ + +.++++++..+.+........++
T Consensus 338 ~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~~~~~~~~~ 375 (404)
T 3h4t_A 338 TVESLSAALATALT-P--GIRARAAAVAGTIRTDGTTVAAK 375 (404)
T ss_dssp CHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhhhHHHHHHH
Confidence 78999999999997 3 34444444444443333333333
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0019 Score=66.02 Aligned_cols=61 Identities=13% Similarity=0.081 Sum_probs=43.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..++++||+||||++..-.| .....-.++.+.|+.++.+....++++|||+...+...+..
T Consensus 21 ~~kliifDlDGTLlds~i~~---------~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~ 81 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHTIDE---------QKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGR 81 (289)
T ss_dssp CSEEEEEETBTTTBCSSCCH---------HHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcCCCCCc---------chHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHh
Confidence 35899999999999853111 11112234456666788888889999999999998887754
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0038 Score=62.55 Aligned_cols=55 Identities=11% Similarity=0.234 Sum_probs=43.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+++++|+||||.... ...+++..++|++|.+. ...|++.|||+...+...+..+
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~~~~l 57 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQ--------------KQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHVRKQL 57 (258)
T ss_dssp CCEEEECTBTTTBCTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHHHHHH
T ss_pred ceEEEEeCCCCCcCCC--------------CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHhc
Confidence 3789999999999742 23568899999999764 5688999999998776665543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0022 Score=64.26 Aligned_cols=51 Identities=14% Similarity=0.101 Sum_probs=40.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
++|++|+||||.+.. . . .+++.++|+++.+ ...|+|+|||+...+..++..
T Consensus 4 ~li~~DlDGTLl~~~-------------~-~-~~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~ 54 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ-------------Q-A-LEHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQ 54 (244)
T ss_dssp EEEEECTBTTTBSCH-------------H-H-HHHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHH
T ss_pred eEEEEeCCCCCcCCH-------------H-H-HHHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHH
Confidence 599999999999731 1 1 1577888888653 588999999999999888765
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0052 Score=55.45 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=37.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+++++|+||||+.....+ . ....+++...+.|+.|.+. ...++|+|||+.
T Consensus 2 k~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQL-GFEIVISTARNM 51 (126)
T ss_dssp CEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHHT-TCEEEEEECTTT
T ss_pred CEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHhC-CCeEEEEeCCCh
Confidence 589999999999753211 0 1134678999999999875 678999999986
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.009 Score=56.14 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=39.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+++|||.||||+.....- . .......+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 2 k~v~~D~DGtL~~~~~~~---~--~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDAF---V--KSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp CEEEECSBTTTBCCCTTC---C--CSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred CEEEEcCCCccccCCCcc---C--CCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 689999999999753211 0 0013456789999999999875 578999999985
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.16 Score=59.22 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=109.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
.++.+.-++ .|=-+..++.+.++|++.|+-+ |++...+. .....+ .+.+.+ +|.. -..|+|
T Consensus 524 v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l----~~~~~~----~gi~-~~r~~f 584 (723)
T 4gyw_A 524 IVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNI----QQYAQN----MGLP-QNRIIF 584 (723)
T ss_dssp EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHH----HHHHHH----TTCC-GGGEEE
T ss_pred EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHH----HHHHHh----cCCC-cCeEEE
Confidence 333344444 4557899999999999999753 66665332 111223 333332 2321 134665
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc-h-----hhc---cCceEEECCCCH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA-A-----QSL---GAGAILVNPWNI 514 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~-~-----~~l---g~~gllVnP~D~ 514 (673)
.+..+.++..+.|+.+||++-|--+-| +.+..||+.+ |++|+|--+.. + ..+ |-.-++ -.|.
T Consensus 585 -~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~~~ 655 (723)
T 4gyw_A 585 -SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELI--AKNR 655 (723)
T ss_dssp -EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CSSH
T ss_pred -CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCcccc--cCCH
Confidence 567899999999999999999998877 7899999999 66676643211 0 111 222222 2467
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh---CCHHHHHHHHHHHHHHhHHH
Q 005855 515 TEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~~~~~ 565 (673)
++..+.-.++-+++ +.+....+++++...+ +|...|++.|-..+...+..
T Consensus 656 ~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 656 QEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 77666655555554 3455544555555543 58899999988888877654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.06 Score=57.77 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=76.6
Q ss_pred CCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRL-d~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
...++++.|++ +..|.+..+++|++.+ + . .++.+.++. + .+ . ..+ . ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~----~~v~~~g~~--~-~~-------~----~~~------~--~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-R----RVILSRGWA--D-LV-------L----PDD------G--AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-C----CEEECTTCT--T-CC-------C----SSC------G--GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-C----eEEEEeCCC--c-cc-------c----cCC------C--CC
Confidence 35678899999 6888888888888754 2 2 133332211 1 00 0 000 0 12
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
+. +.+.+++.+ ++..||++|..+ |. .++.|+|++| .|+|+-...+ .++.+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHHG---GA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHH---HHhhCCEEEeCC---Ch-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 44 467888765 469999999753 43 6899999995 7888776543 22323 2467888763
Q ss_pred CHHHHHHHHHHHhcC
Q 005855 513 NITEVANAIARALNM 527 (673)
Q Consensus 513 D~~~lA~aI~~aL~m 527 (673)
+.++++++|.++ +.
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 889999999999 65
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0083 Score=55.55 Aligned_cols=66 Identities=21% Similarity=0.098 Sum_probs=45.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+...... ..........+++..+.|+.|.+. ...++|+||++...++..+....
T Consensus 9 ~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~g 74 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRLKELG 74 (162)
T ss_dssp CCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHHHHTT
T ss_pred eeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHHHcC
Confidence 5789999999999642100 000001223456788999999864 56899999999988888776543
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0087 Score=56.88 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=44.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+.....- ....+.....+++..++|+.|.+. ...++|+||+....++..+....
T Consensus 8 ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~lg 73 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIADLG 73 (180)
T ss_dssp CCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHHHHT
T ss_pred CeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHcC
Confidence 4799999999999742100 000001123456778899999875 56899999999988887776543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.036 Score=53.64 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=45.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.-+++|||+||||+....... ...........+.+.+.++|+.|.+. .-.++|+||.....+.+..+
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred cCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 346799999999987421110 00000112346779999999999764 46789999999988766665
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.41 Score=51.14 Aligned_cols=93 Identities=5% Similarity=-0.038 Sum_probs=62.0
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
+. +.+.+++. .+|..||++|..+ | ..+.+|++++| .|+|+.-..+ .+..+ ...|+.+++.
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eE-EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 44 34677765 6899999988643 3 36899999995 7888876643 12222 2457888765
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
+.++++++|.++|+.+ +.+++.+++.+.+...+
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 8999999999999864 33444444444444433
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.013 Score=51.98 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=39.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
+++++|+||||.. ...+.+++.+.|+.|.+. ...++|+|+++...++..+.
T Consensus 3 k~i~~D~DgtL~~---------------~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 3 RGLIVDYAGVLDG---------------TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CEEEECSTTTTSS---------------CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHHH
T ss_pred cEEEEeccceecC---------------CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHH
Confidence 6799999999942 234568899999999875 57899999998876554443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.82 E-value=0.025 Score=56.68 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=41.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~ 659 (673)
-++++||.||||.... .+.++.+++|++|.+. .-.|+++|| |+...+.+.+..
T Consensus 8 ~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l~~ 63 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERLRS 63 (268)
T ss_dssp CSEEEEECBTTTEETT---------------EECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHHHH
T ss_pred CCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHHHH
Confidence 4799999999999631 1346899999999875 678999999 777777666654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.052 Score=52.78 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=39.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.++++||+||||+....... . .....+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 25 ~k~v~~D~DGTL~~~~~~~~----~--~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~ 77 (211)
T 2gmw_A 25 VPAIFLDRDGTINVDHGYVH----E--IDNFEFIDGVIDAMRELKKM-GFALVVVTNQSG 77 (211)
T ss_dssp BCEEEECSBTTTBCCCSSCC----S--GGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTH
T ss_pred CCEEEEcCCCCeECCCCccc----C--cccCcCCcCHHHHHHHHHHC-CCeEEEEECcCC
Confidence 46899999999997532110 0 13456788999999999875 578999999993
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.074 Score=50.60 Aligned_cols=69 Identities=19% Similarity=0.129 Sum_probs=45.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH---HhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~---~~L~~~~~~~~ 661 (673)
++++||+||||+......-.......-....+.+++.++|+.|.+. .-.++|+|+.+. ..++..+....
T Consensus 4 k~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~~g 75 (189)
T 3ib6_A 4 THVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTNFG 75 (189)
T ss_dssp CEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHTT
T ss_pred eEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHhcC
Confidence 5799999999986322100000000002357889999999999875 578999998876 66666665433
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=94.51 E-value=0.035 Score=53.02 Aligned_cols=66 Identities=12% Similarity=0.191 Sum_probs=41.9
Q ss_pred hhccCeEEEEcccccccCCC----CCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 587 LRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~----~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
....-++++||+||||++.. ..+ . ........-...|+.|.+. ...|+|+||++...++.++....
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~----~----~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l~~lg 91 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNG----E----ELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRCATLG 91 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTS----C----EEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCC----c----EEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHHHHcC
Confidence 44567899999999999731 111 0 0000111122367777654 57899999999988888776543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.022 Score=57.92 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=43.4
Q ss_pred cCeEEEEcccccccCCCC-----------CCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC---HHhHHH
Q 005855 590 NNRLLILGFNATLTEPVD-----------TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDK 655 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~-----------~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~---~~~L~~ 655 (673)
+.++++||+||||....+ .+.............+.+.+.++|+.|.+. ...++|+|||+ +..+.+
T Consensus 58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~~ 136 (258)
T 2i33_A 58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKTNQLDATIK 136 (258)
T ss_dssp SEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEGGGHHHHHH
T ss_pred CCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHH
Confidence 457899999999997520 000000000001256778999999999875 57899999999 555555
Q ss_pred Hh
Q 005855 656 VL 657 (673)
Q Consensus 656 ~~ 657 (673)
++
T Consensus 137 ~L 138 (258)
T 2i33_A 137 NL 138 (258)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.21 E-value=0.055 Score=51.17 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=39.1
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
+..++++||.||||...... ... ........+.+.+.++|+.|.+. .-.++|+|+.
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~--~~~-~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPS--DFQ-VDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp -CCEEEEECSBTTTBCCC----CCC-CCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CcCcEEEEeCCCCeEcCCCC--CcC-cCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 45689999999999865310 000 00113467789999999999875 5689999998
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.05 E-value=0.03 Score=56.09 Aligned_cols=53 Identities=6% Similarity=0.047 Sum_probs=40.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~ 659 (673)
-++|+||.||||... ..+.++.+++|++|.+. .-.|+++|| |+...+.+.+..
T Consensus 6 ~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l~~ 61 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKLVS 61 (266)
T ss_dssp CSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHH
Confidence 479999999999853 12346889999999875 568999988 777766665544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.60 E-value=0.05 Score=54.55 Aligned_cols=54 Identities=7% Similarity=0.165 Sum_probs=42.0
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~~ 660 (673)
-++|+||.||||.... ... ++..++|++|.+. .-.|+++| ||+...+...+...
T Consensus 5 ~kli~~DlDGTLl~~~--------------~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l~~l 61 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK--------------SRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEMLRGF 61 (264)
T ss_dssp CCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHHTT
T ss_pred CCEEEEeCCCceEeCC--------------EEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHC
Confidence 4799999999998641 122 6899999998875 56788999 88888877777644
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=93.58 E-value=0.24 Score=52.99 Aligned_cols=136 Identities=10% Similarity=-0.022 Sum_probs=80.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~VgRLd---~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
...++++.|++. ..|.+..+++|++.+ + . .++.+.+.. +. + . .. ..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~v~~~g~~--~~-~---~--------~~----~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-R----RVILSRGWT--EL-V---L--------PD----DR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-C----CEEEECTTT--TC-C---C--------SC----CC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-C----eEEEEeCCc--cc-c---c--------cC----CC----
Confidence 356778889984 566677777777653 1 2 233332221 10 0 0 00 00
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECC-
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP- 511 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP- 511 (673)
..+. +.+.++..+ +|..||++|. +-|. .+..|++++| .|+|+--..+ .+..+ ...|+.+++
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~ 353 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGP 353 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSS
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCC
Confidence 1244 357777654 6799999997 3454 5999999995 7777765432 22223 245777765
Q ss_pred -CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 512 -WNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 512 -~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
.+.++++++|.++ +. + +.++++++..+.+
T Consensus 354 ~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 354 TPTFESLSAALTTV-LA-P-ETRARAEAVAGMV 383 (416)
T ss_dssp CCCHHHHHHHHHHH-TS-H-HHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHh-hC-H-HHHHHHHHHHHHH
Confidence 5889999999999 64 3 3334444443333
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=92.91 E-value=0.11 Score=47.89 Aligned_cols=66 Identities=9% Similarity=0.163 Sum_probs=39.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||++....-........ .....-...|+.|.+. .-.++|+||++....+..+....
T Consensus 4 ik~vifD~DGTL~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~g 69 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMFYDQTGNEWK----KFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAEKLK 69 (164)
T ss_dssp CCEEEECSTTTTSSSEEEECSSSCEEE----EEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHHHTT
T ss_pred ceEEEEcCCCceEcCcEEEcCCCcEEE----EecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcC
Confidence 478999999999984210000000000 0001111256777664 46899999999988888776544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.043 Score=51.98 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=38.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+.....-.......... ...+.+ .|+.|.+. .-.++|+||+....++..+....
T Consensus 12 ~k~vifD~DGTL~d~~~~~~~~~~~~~~~--~~~~~~--~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~lg 77 (176)
T 3mmz_A 12 IDAVVLDFDGTQTDDRVLIDSDGREFVSV--HRGDGL--GIAALRKS-GLTMLILSTEQNPVVAARARKLK 77 (176)
T ss_dssp CSEEEECCTTTTSCSCCEECTTCCEEEEE--EHHHHH--HHHHHHHT-TCEEEEEESSCCHHHHHHHHHHT
T ss_pred CCEEEEeCCCCcCcCCEeecCCccHhHhc--ccccHH--HHHHHHHC-CCeEEEEECcChHHHHHHHHHcC
Confidence 47899999999998211000000001100 001111 57777664 46899999999988888776544
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=92.64 E-value=0.11 Score=51.78 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=41.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~~ 660 (673)
-+.++||.||||... ...+++..++|++|.+. .-.|+++| ||+...+.+.+...
T Consensus 17 ~~~v~~DlDGTLl~~---------------~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~~~l 73 (271)
T 1vjr_A 17 IELFILDMDGTFYLD---------------DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLRNM 73 (271)
T ss_dssp CCEEEECCBTTTEET---------------TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHHHT
T ss_pred CCEEEEcCcCcEEeC---------------CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHHHHc
Confidence 467999999999964 12346788889888765 45788999 99998888777553
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=92.40 E-value=0.15 Score=53.67 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=54.3
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhcc--CceEEECCCCHHHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSLG--AGAILVNPWNITEV 517 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~lg--~~gllVnP~D~~~l 517 (673)
+.+.+++. .++..||+||.- -|+| +..|+|++| .|+|+--+.+ .+..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~lL~~~~~~v~h---~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~ 358 (400)
T 4amg_A 292 VVEWIPLG---ALLETCDAIIHH---GGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLG 358 (400)
T ss_dssp EECCCCHH---HHHTTCSEEEEC---CCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTT--TCS
T ss_pred EEeecCHH---HHhhhhhheecc---CCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCC--Cch
Confidence 45677765 467889998853 3554 678999995 7777754433 223231 246666654 457
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999865 3444455555555444
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.056 Score=54.22 Aligned_cols=44 Identities=11% Similarity=0.210 Sum_probs=33.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~ 651 (673)
++|+||+||||.... . +.++..+.|+.|.+. ...|+++|||+..
T Consensus 2 k~i~~D~DGtL~~~~-------------~--~~~~~~~~l~~l~~~-g~~~~~~T~r~~~ 45 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN-------------R--AIPGVRELIEFLKER-GIPFAFLTNNSTK 45 (263)
T ss_dssp EEEEEECBTTTEETT-------------E--ECTTHHHHHHHHHHH-TCCEEEEESCCSS
T ss_pred eEEEEeCcCceEeCC-------------E--eCccHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 589999999999531 1 225788899998764 5689999999864
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=91.76 E-value=0.12 Score=49.17 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=29.3
Q ss_pred ccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 620 ~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
...+.+.+.++|+.|.+.+...++|+|+++...++.++.
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~ 109 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGE 109 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHH
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHH
Confidence 346789999999999874346899999998765544443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.46 E-value=0.19 Score=49.44 Aligned_cols=57 Identities=12% Similarity=0.059 Sum_probs=40.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
-++++||+||||.... . ....+.+....+++.|.+. ...++++| ||+...+.+.+..
T Consensus 12 ~k~i~fDlDGTLl~s~--~---------~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l~~ 71 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSG--A---------GGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQLQR 71 (271)
T ss_dssp CCEEEECCBTTTEECC--T---------TTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHHHH
T ss_pred CCEEEEeCCCeEEecC--C---------CCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 4799999999999742 0 0122446777778888765 46788999 9998877666654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.30 E-value=0.093 Score=50.38 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=38.9
Q ss_pred cCeEEEEcccccccCCC---CCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPV---DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~---~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+... ...+ . ........-...|+.|.+. .-.++|+||++...++..+....
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~~~~---~----~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~~lg 84 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHIDNHG---N----ELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRMEQLG 84 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEECTTC---C----EECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHHHHT
T ss_pred cCCEEEEeCCCCCCCCceeecCCc---h----hhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHHHcC
Confidence 34789999999999721 1110 0 0011111111147777664 56899999999988877776544
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=91.10 E-value=0.14 Score=49.87 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=39.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
-+++++|.||||........ ......+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 31 ~k~i~~D~DGtl~~~~~y~~------~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 31 LPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSG 83 (218)
T ss_dssp CCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHH
T ss_pred CCEEEEeCCCCcCCCCcccC------CcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCC
Confidence 47799999999986522111 013456788999999999874 568999999998
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=91.05 E-value=0.2 Score=50.57 Aligned_cols=55 Identities=9% Similarity=0.142 Sum_probs=41.2
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDLV 660 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~~ 660 (673)
+-++++||+||||.... .+.+...+.|+.|.+. ...|+++|| |+...+.+.+...
T Consensus 13 ~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 35789999999998631 1346788899998875 567888885 8888777777554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=90.97 E-value=0.19 Score=51.47 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=40.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
-++++||.||||.... .+.+...+.|+.|.+. ...|+++| ||+...+.+.+..
T Consensus 21 ~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~~~ 76 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGE---------------RAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRFAR 76 (306)
T ss_dssp CSEEEECSBTTTEETT---------------EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHh
Confidence 4689999999998531 2346788899998875 56788999 6888887766654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.59 E-value=0.25 Score=47.64 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=35.5
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
++++||+||||.... .. .++. .+.++.|.+. .-.++++| ||+...+.+.+..
T Consensus 4 k~i~fDlDGTLl~~~-------------~~-~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 4 KNVICDIDGVLMHDN-------------VA-VPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CEEEEECBTTTEETT-------------EE-CTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHH
T ss_pred cEEEEcCcceEEeCC-------------Ee-CcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 689999999999742 11 2234 6677777664 34566888 8988777666543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=89.95 E-value=0.46 Score=45.82 Aligned_cols=67 Identities=15% Similarity=0.269 Sum_probs=40.0
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+.....-..... ........-...|+.|.+. .-.++|+||......+..+....
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~~~~----~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~l~~lg 90 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGNQGE----ELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENRMKALG 90 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECTTSC----EECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHTT
T ss_pred CCCEEEEcCCCCcCCCcEEEccCch----hhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHHHHHcC
Confidence 4579999999999973110000000 1111111222347777664 46899999999998887776554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=89.05 E-value=0.17 Score=48.33 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=39.5
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+.....-...... .....-.-...|+.|.+. .-.++|+||+....++..+....
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~----~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~lg 84 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSE----IKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAKSLG 84 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCE----EEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcE----eeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHHHcC
Confidence 45789999999999742100000000 000001111267777664 46899999999988888776544
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=88.85 E-value=0.084 Score=53.84 Aligned_cols=69 Identities=7% Similarity=0.057 Sum_probs=47.7
Q ss_pred ccCeEEEEcccccccCCCCC-------CCCCCcc------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH----H
Q 005855 589 SNNRLLILGFNATLTEPVDT-------PGRRGDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----N 651 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~-------p~~~~~~------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~----~ 651 (673)
.++.+++||.||||+..... ...+ +. .....++|-+.+.++|+.|.+. ...|+|||||+. +
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f-~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPF-DGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCC-CHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETTTTHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccC-CHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccchHH
Confidence 45678999999999975320 0000 00 0123567889999999999875 578999999965 4
Q ss_pred hHHHHhcc
Q 005855 652 VLDKVLDL 659 (673)
Q Consensus 652 ~L~~~~~~ 659 (673)
...+++..
T Consensus 134 ~T~~~L~~ 141 (262)
T 3ocu_A 134 GTIDDMKR 141 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666655
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=88.51 E-value=0.62 Score=45.58 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=35.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLD 658 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~ 658 (673)
-++++||+||||.... ...++..++++.|.+. .-.++++| |++...+.+.+.
T Consensus 7 ik~i~fDlDGTLld~~---------------~~~~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l~ 61 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIED---------------AAVPGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERLK 61 (259)
T ss_dssp CCEEEEESSSSSCC------------------CCTTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHHH
T ss_pred CCEEEEeCcCcEEeCC---------------EeCcCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHHH
Confidence 4789999999999742 1224667778888775 34678899 676666655554
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.19 Score=49.03 Aligned_cols=60 Identities=8% Similarity=0.012 Sum_probs=37.3
Q ss_pred CeEEEEcccccccCCCCC---------CCCCCcccc-----------ccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDT---------PGRRGDQIR-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~---------p~~~~~~~~-----------~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
-++++||+||||+...+. +........ .....|.+.+.+.|+.|.+. .-.++|+|+++.
T Consensus 37 ~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~-G~~l~ivTn~~~ 115 (211)
T 2b82_A 37 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR-GDAIFFVTGRSP 115 (211)
T ss_dssp CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH-TCEEEEEECSCC
T ss_pred CCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC-CCEEEEEcCCcH
Confidence 578999999999974210 000000000 00123566889999999764 468999999975
Q ss_pred H
Q 005855 651 N 651 (673)
Q Consensus 651 ~ 651 (673)
.
T Consensus 116 ~ 116 (211)
T 2b82_A 116 T 116 (211)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=87.79 E-value=0.43 Score=46.30 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=30.0
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++..+...
T Consensus 105 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 142 (240)
T 2no4_A 105 SAYPDAAETLEKLKSA-GYIVAILSNGNDEMLQAALKAS 142 (240)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 4558899999999874 5789999999998777766543
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=87.07 E-value=0.39 Score=48.79 Aligned_cols=71 Identities=8% Similarity=0.097 Sum_probs=46.8
Q ss_pred ccCeEEEEcccccccCCCCCCC-----CC-Ccc------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH----Hh
Q 005855 589 SNNRLLILGFNATLTEPVDTPG-----RR-GDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----NV 652 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~-----~~-~~~------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~----~~ 652 (673)
.++.+++||.||||+.-...-. .. .+. .....++|.+.++++|+.|.+. ...|+|||||+. +.
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccccHHH
Confidence 3456999999999997531100 00 000 0123567889999999999875 578999999964 46
Q ss_pred HHHHhccc
Q 005855 653 LDKVLDLV 660 (673)
Q Consensus 653 L~~~~~~~ 660 (673)
..+++...
T Consensus 135 T~~~L~~l 142 (260)
T 3pct_A 135 TVDDMKRL 142 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666553
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=86.88 E-value=0.27 Score=48.12 Aligned_cols=67 Identities=15% Similarity=0.366 Sum_probs=39.7
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.-++++||+||||+.....-.......... ...+.+ .|+.|.+. .-.++|+||+.....+..+....
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~--~~~d~~--~L~~L~~~-G~~l~I~T~~~~~~~~~~l~~lg 114 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGNQGEELKAF--NVRDGY--GIRCLITS-DIDVAIITGRRAKLLEDRANTLG 114 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEETTSCEEEEE--EHHHHH--HHHHHHHT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCEECCHHHHhhhhHHHHHh--ccchHH--HHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcC
Confidence 347999999999997421000000001100 011111 67777764 46899999999988887776544
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=86.66 E-value=0.53 Score=46.66 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=35.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~ 655 (673)
-++++||+||||.... . +-+++.+.|+.|.+. ...++++|||.....+.
T Consensus 5 ~k~v~fDlDGTL~~~~-------------~--~~~~~~~~l~~l~~~-g~~~~~~t~~~~~~~~~ 53 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK-------------E--PIPAGKRFVERLQEK-DLPFLFVTNNTTKSPET 53 (264)
T ss_dssp CCEEEECCBTTTEETT-------------E--ECHHHHHHHHHHHHT-TCCEEEEECCCSSCHHH
T ss_pred CCEEEEeCCCeEEeCC-------------E--ECcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHH
Confidence 4789999999999741 1 125778888888765 45678999987644333
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=86.59 E-value=1.2 Score=42.78 Aligned_cols=39 Identities=5% Similarity=-0.022 Sum_probs=31.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+.+++.+.|+.|.+. .-.++|+||.....++.++....
T Consensus 92 ~~~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~g 130 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFG 130 (232)
T ss_dssp GCCHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTT
T ss_pred hcCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcC
Confidence 4588999999999874 56899999999988877776543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=86.52 E-value=0.33 Score=50.58 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=32.6
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.+.|+.|.+. .-.++|+||.....++.++....
T Consensus 178 ~~l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~lg 217 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLKARYQ 217 (317)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHHT
T ss_pred CEECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHHcC
Confidence 46788999999999875 57899999999988777766543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=86.05 E-value=0.97 Score=48.88 Aligned_cols=58 Identities=14% Similarity=0.210 Sum_probs=38.6
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
...+++|||+||||..... +.........-..+.+.+.++|+.|.+. .-.++|+|+.+
T Consensus 56 ~~~k~v~fD~DGTL~~~~~--~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRS--GKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSS--CSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCC--CccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 3468999999999985421 1000000111223678999999999875 57899999965
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=85.24 E-value=7.3 Score=39.95 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=55.7
Q ss_pred ceEEEeec-ccccCChH--HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 364 KVMLGVDR-LDMIKGIP--QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 364 ~iIl~VgR-Ld~~KGi~--~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.+++..|- ..+.|..+ ...+..+.|.++ ++ .++++|++. +. + .++++...++... -.+
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~----~vvl~g~~~-----e~-~---~~~~i~~~~~~~~----~~~ 242 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GY----QVVLFGSAK-----DH-E---AGNEILAALNTEQ----QAW 242 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TC----EEEECCCGG-----GH-H---HHHHHHTTSCHHH----HTT
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHC--CC----eEEEEeChh-----hH-H---HHHHHHHhhhhcc----ccc
Confidence 45566665 55677776 666666666543 33 345455432 21 2 2222322211000 013
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
++.+.+..+..++.++++.||++|-+.. -+...|.|.+
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~Ds-----g~~HlAaa~g 280 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALN 280 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTT
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcC
Confidence 5556788999999999999999998752 3344588874
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=84.43 E-value=0.87 Score=42.92 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=31.9
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.++|+.|.+. .-.++|+|+.....++..+....
T Consensus 69 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~ 108 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGR-GYRLGILTRNARELAHVTLEAIG 108 (205)
T ss_dssp EEECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred CCCCccHHHHHHHHHhc-CCeEEEEeCCchHHHHHHHHHcC
Confidence 35778999999999874 46899999999988877765543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=84.41 E-value=1.2 Score=43.60 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=29.3
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|. ...++|+|+.....++..+...
T Consensus 93 ~~~~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~ 128 (253)
T 1qq5_A 93 TPYPDAAQCLAELA---PLKRAILSNGAPDMLQALVANA 128 (253)
T ss_dssp CBCTTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHHC
Confidence 56688999999988 5789999999998877766543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=84.35 E-value=0.74 Score=43.36 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=35.0
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+-++|++|+||||+...-.-...+..+. .. +-.=...|+.|.+. .-.++|+||+ ...+..+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~---~f-~~~D~~~L~~Lk~~-Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEII---SY-DVKDAIGISLLKKS-GIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEE---EE-EHHHHHHHHHHHHT-TCEEEEECSS--CCCHHHHH
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEE---EE-ecCcHHHHHHHHHC-CCEEEEEeCc--HHHHHHHH
Confidence 34589999999999974211000000000 00 00111257777765 4689999999 55555555
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=83.87 E-value=0.54 Score=44.25 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+++.+ |+.|.+. ..++|+|+.+...++..+...
T Consensus 74 ~~~~~~~~-l~~l~~~--~~~~i~t~~~~~~~~~~l~~~ 109 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI--AEVYALSNGSINEVKQHLERN 109 (201)
T ss_dssp EECGGGGG-HHHHHHH--SEEEEEESSCHHHHHHHHHHT
T ss_pred ccCCChHH-HHHHHhC--CeEEEEeCcCHHHHHHHHHHC
Confidence 45678888 8888765 789999999988777766543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=83.24 E-value=0.99 Score=43.19 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=30.1
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++.++...
T Consensus 95 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 132 (232)
T 1zrn_A 95 APFSEVPDSLRELKRR-GLKLAILSNGSPQSIDAVVSHA 132 (232)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhc
Confidence 4568899999999874 5689999999988877776643
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.01 E-value=0.93 Score=43.82 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=49.3
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCcc---------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~---------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..++.+++||.||||+.....|....+. .......+-|.+.+.|+.|.+. -.++|.|...+...+..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~--~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL--FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC--CeEEEEcCCCHHHHHHHHH
Confidence 3567889999999999764333211110 0001234568999999999984 8999999999987777665
Q ss_pred cc
Q 005855 659 LV 660 (673)
Q Consensus 659 ~~ 660 (673)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 43
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=81.88 E-value=1.4 Score=46.74 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=32.8
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
+.+.|+||.||||.... .+-++..+.|+.|.+. .-.++++|+.+
T Consensus 12 ~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~~-g~~~~~vTNn~ 55 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNRN-KIPYILLTNGG 55 (352)
T ss_dssp CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHHT-TCCEEEECSCC
T ss_pred cCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 67889999999998631 2346788888888875 45677888654
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=81.72 E-value=1.2 Score=42.47 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=48.8
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccc---------cccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~---------~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.++.+++||.|+||+.....|....+.. ......+-|.+.+.|+.|++. -.++|.|.......+..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~--~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL--FECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC--CCEEEEcCCCHHHHHHHHHH
Confidence 4578899999999997654442111100 011245678999999999984 89999999999877666554
Q ss_pred c
Q 005855 660 V 660 (673)
Q Consensus 660 ~ 660 (673)
+
T Consensus 91 l 91 (181)
T 2ght_A 91 L 91 (181)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.47 E-value=0.71 Score=44.08 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=32.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHH-hcCCCCeEEEEcCCCHHh-HHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL-CHDPKTTIVVLSGSDRNV-LDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L-~~d~~n~V~ViSGR~~~~-L~~~~~~ 659 (673)
.++++||+||||..... ...+...+.++++ .......+...+||.... ++..+..
T Consensus 4 ~k~iifDlDGTL~d~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVES--------------MNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEEECT--------------HHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCcccCcc--------------chHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 37899999999997421 1234566667763 332223566789998766 5555543
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=81.23 E-value=2.4 Score=42.19 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=30.4
Q ss_pred cCCChhHHHHHHHHhcCCCC--eEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKT--TIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n--~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+.+.++|+.|.+. .. .++|+|+.....++..+..
T Consensus 141 ~~~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~~ 180 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLRL 180 (282)
T ss_dssp CCCCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHHHHh
Confidence 45788999999999875 45 8999999998877766543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=80.51 E-value=2.7 Score=39.79 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=30.4
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+.+.+.|+.|.+. ...++|+|+.+...++..+..
T Consensus 95 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 132 (230)
T 3um9_A 95 LTPFADVPQALQQLRAA-GLKTAILSNGSRHSIRQVVGN 132 (230)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHHH
Confidence 35678899999999874 468999999999877776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 673 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-137 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-09 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 5e-06 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 406 bits (1045), Expect = e-137
Identities = 158/472 (33%), Positives = 238/472 (50%), Gaps = 22/472 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNED--QP 51
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
L E + +YYN + N +LWP FHY RL + + +
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 104
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 105 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 164
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 224
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 225 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 283
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 284 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 343
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 344 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 402
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563
++ EVA A+ RAL MS ER RH + + W E F+S+L V
Sbjct: 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 56.4 bits (134), Expect = 5e-09
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 165 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 224
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 345 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 522
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 523 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 47.4 bits (111), Expect = 5e-06
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 268
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 269 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 315
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 316 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 364
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 365 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 480
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 481 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 534
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 334 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 390
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 511 PWNITEVANAIARALNMSPEEREK 534
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 673 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.95 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.95 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.89 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.75 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.3 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 97.41 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.4 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 97.37 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.3 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 97.16 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.16 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 97.08 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.96 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.93 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.92 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.84 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.69 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 96.45 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 95.9 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 95.69 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 95.36 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 93.55 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 93.28 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 92.55 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 91.49 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 90.31 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 90.3 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 89.5 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 89.44 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 88.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 87.74 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 87.29 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.99 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 86.65 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 83.85 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 83.38 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 82.54 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 81.96 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 80.59 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-99 Score=839.29 Aligned_cols=450 Identities=35% Similarity=0.622 Sum_probs=413.0
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 005855 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (673)
Q Consensus 94 ~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (673)
+||||||||+|+..++ +.++|||++||.++ +..+|+||||+|...++++. .......+++|.||+|+++
T Consensus 1 srlivvsnr~~~~~~~--------~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~ 70 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEH--------AASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQ 70 (456)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCCCC--------CCCCccHHHHhHHHHhhCCCEEEecCCCCCcccch--hhhhhccCceeEEecCCHH
Confidence 5899999999997653 35799999999998 77899999999976554322 1223457899999999999
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (673)
++++||+||||++|||+|||+.... .|+ ++|++|++||+.||++|.+.++++|+||||||||+++|.+||+
T Consensus 71 ~~~~~Y~gf~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 71 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhccccccccCccccc--------cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEeccchhhhHHHHHH
Confidence 9999999999999999999985332 366 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccC-CCceeeCCeeeEEEE
Q 005855 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRVAA 330 (673)
Q Consensus 252 ~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~-~~~i~~~gr~~~v~v 330 (673)
+.|+++|+||+|+|||++++|+++|++++|+++|++||+||||+++|++||+.+|.++++.+.. ...+.+.|+.+++.+
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~ 222 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 222 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999999987653 456789999999999
Q ss_pred eecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
+|+|||++.|.+....+ +.+.+.+++..++++++|++|||+|+.||+..+|+||++|++++|+++++++|+|++.|+++
T Consensus 223 ~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~ 301 (456)
T d1uqta_ 223 YPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 301 (456)
T ss_dssp CCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCccc
Confidence 99999999998876554 34566778888899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhcc-CCCce
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~-~~~g~ 489 (673)
+.++|.+++.++.+++++||++|+..+|.|++++.+.++++++.++|+.|||+++||++||||||++||||||. .++|+
T Consensus 302 ~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~ 381 (456)
T d1uqta_ 302 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381 (456)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985 35789
Q ss_pred EEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhH
Q 005855 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (673)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 563 (673)
||+|+++|+++++ .+|++|||+|++++|+||.++|+||++||++|+++++++|.+||+++|+++||++|+++.
T Consensus 382 lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 382 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred EEEeCCCCCHHHh-CCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhhc
Confidence 9999999999999 679999999999999999999999999999999999999999999999999999998753
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=7.5e-26 Score=249.16 Aligned_cols=321 Identities=17% Similarity=0.211 Sum_probs=218.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEeCccchhHHHHHHh-hCCCCeEEeEeccCCC----chhhhhcCC--c
Q 005855 207 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP----SSEIHRTLP--S 277 (673)
Q Consensus 207 ~~~~w~~Y~~vN~~fA~~i~~~~~--~~DvVwvHDyhl~llp~~Lr~-~~~~~~Ig~flH~PfP----~~e~fr~lp--~ 277 (673)
|.+.|..|...++.+++.+..... ..|+||+||+|..+.+.+++. +.+++++.+++|.... ....+..+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 444577888888888776665544 459999999999999988874 5678999999996521 112222111 0
Q ss_pred -------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhh
Q 005855 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (673)
Q Consensus 278 -------------r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~ 344 (673)
...+..++..+|.+...+..+++..+.. ..+... +.+ ...+..++.++|+|||.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHH---hcCcch--hhh-hhhccccEEEEECCcchhhccccc
Confidence 1123345778999999998887765431 111100 000 112345788999999999887532
Q ss_pred cC-----------ChhHHHHHHHHHHh----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 005855 345 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (673)
Q Consensus 345 ~~-----------~~~~~~~~~lr~~~----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr 409 (673)
.. .......+.++..+ +++++|+++||+++.||++.+++|++++++.++ .|+++|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G~G-- 329 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLGAG-- 329 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEECB--
T ss_pred cccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCC------eEEEEecC--
Confidence 11 01112223344333 246799999999999999999999999987643 36666642
Q ss_pred CChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCce
Q 005855 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (673)
Q Consensus 410 ~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~ 489 (673)
+.. ...++.++..+.+. .+.+ .+..+.+++..+|+.||+||+||.+||||+|++|||||| .|
T Consensus 330 -~~~----~~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G----~P 391 (477)
T d1rzua_ 330 -DVA----LEGALLAAASRHHG--------RVGV-AIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CI 391 (477)
T ss_dssp -CHH----HHHHHHHHHHHTTT--------TEEE-EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CE
T ss_pred -Cch----HHHHHHHHHhhcCC--------eEEE-EcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcC----CC
Confidence 221 22333344433332 2443 466788899999999999999999999999999999995 99
Q ss_pred EEEeCCCCchhhc--c---------CceEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhHHHhhCCHHHHHHHHH
Q 005855 490 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (673)
Q Consensus 490 lVlSe~aG~~~~l--g---------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (673)
+|+|+.+|..+.+ | .+|++|+|.|++++|++|.++|+. .++.++++.+++. -++++++.-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH--HhhCCHHHHHHHHH
Confidence 9999999999987 2 279999999999999999998863 3444444444332 23578777777776
Q ss_pred HHHHH
Q 005855 557 SELND 561 (673)
Q Consensus 557 ~~L~~ 561 (673)
+.-++
T Consensus 470 ~lY~~ 474 (477)
T d1rzua_ 470 ALYSQ 474 (477)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.95 E-value=1.2e-25 Score=241.20 Aligned_cols=305 Identities=20% Similarity=0.216 Sum_probs=220.5
Q ss_pred HHHHHHHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch---hhhhc--C----C--cchHHHHhhhcC
Q 005855 220 MFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT--L----P--SRSDLLRAVLAA 288 (673)
Q Consensus 220 ~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~---e~fr~--l----p--~r~~il~~ll~a 288 (673)
..+..+.+....+|+||+|+++..+++.++++. .+.++.+.+|..++.. ..+.. + . ...........+
T Consensus 109 ~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (437)
T d2bisa1 109 LLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIA 187 (437)
T ss_dssp HHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHS
T ss_pred HHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhh
Confidence 334444444445699999999998888777765 5688999999876531 11111 1 1 112233445678
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--cCCceE
Q 005855 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM 366 (673)
Q Consensus 289 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI 366 (673)
|.+...+..++.... ..+.. ...++.++|+|+|++.|.+....+........++.++ .++++|
T Consensus 188 d~v~~~~~~~~~~~~----~~~~~-----------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (437)
T d2bisa1 188 DIVTTVSRGYLIDEW----GFFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTF 252 (437)
T ss_dssp SEEEESCHHHHHHTH----HHHGG-----------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEE
T ss_pred hhhcccchhhhhhhh----hhhcc-----------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceE
Confidence 988888765554322 11111 1236789999999999987655444344445566655 367899
Q ss_pred EEeecccc-cCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeC
Q 005855 367 LGVDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (673)
Q Consensus 367 l~VgRLd~-~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~ 445 (673)
+++||++. .||+..+++|++.+..+... .++.|+++|.. .+.+.... +.+... .+ .+.++.
T Consensus 253 ~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~----~~~~~~~~---~~~~~~----~~-----~~~~~~ 314 (437)
T d2bisa1 253 MFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG----DPELEGWA---RSLEEK----HG-----NVKVIT 314 (437)
T ss_dssp EEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB----CHHHHHHH---HHHHHT----CT-----TEEEEC
T ss_pred EEeecccccchhHHHHHhhhccccccccc--ccceeeeeccc----ccccccch---hhhccc----cc-----cceecc
Confidence 99999975 79999999999988654211 14668888742 13333222 222221 11 345578
Q ss_pred CCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-cCceEEECCCCHHHHHHHHHHH
Q 005855 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARA 524 (673)
Q Consensus 446 ~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~a 524 (673)
+.++.+++..+|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++|+|.|++++|++|.++
T Consensus 315 ~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~~l 390 (437)
T d2bisa1 315 EMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKA 390 (437)
T ss_dssp SCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHhhhccccccccccccchHHHHHHHCC----CCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999995 899999999988877 5679999999999999999999
Q ss_pred hcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 525 LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 525 L~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
|+++++.++++.+++++.+++++++++++++++..+++
T Consensus 391 l~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 391 LELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 98777677888888888899999999999998876654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=3.5e-23 Score=201.35 Aligned_cols=192 Identities=20% Similarity=0.231 Sum_probs=153.4
Q ss_pred CcChhhhhhhhcCChhHHHHHHHHHHh--cCCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 334 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 334 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd-~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
|||++.|.+........+....+++++ +++++|++|||++ ++||++.+++|++.|.++.+. .++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999988765555566677788887 4788999999997 589999999999999754332 24678888732
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceE
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 490 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~l 490 (673)
.++++.+.+.+. ..+ ..++++.+.++.+++..+|+.||++|+||..||||++++|||+|| .|+
T Consensus 76 -~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEGWARSLE---EKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHHHHHHHH---HHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -ccchhhhhhhhh---hcc---------ceeEEeeeccccccchhccccccccccccccccccccchhhhhcC----cee
Confidence 244443333332 221 125567899999999999999999999999999999999999995 899
Q ss_pred EEeCCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 491 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 491 VlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
|+|..+|..+.+ +.+|++++|.|+++++++|.++|.+..+.+.++.+.+++++.+++
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred eecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 999988888777 567999999999999999999999888777777777888776653
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=8.4e-24 Score=219.54 Aligned_cols=205 Identities=15% Similarity=0.193 Sum_probs=156.0
Q ss_pred eeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEE
Q 005855 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVL 401 (673)
Q Consensus 325 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~L 401 (673)
..++.++|+|||++.+.+... +. ..+.++..+ .++++|+++||+.+.||+..+++|++.+.+++|+. .+
T Consensus 158 ~~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~----~~ 229 (370)
T d2iw1a1 158 PERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TL 229 (370)
T ss_dssp GGGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EE
T ss_pred cceEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccc----ee
Confidence 346789999999988765432 22 223344444 37889999999999999999999999998887754 35
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHh
Q 005855 402 LQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVA 481 (673)
Q Consensus 402 vqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA 481 (673)
+++++.. . + +.+ ++++.+.+.. ..++++ +. .+++..+|+.||++|+||..||||++++||||
T Consensus 230 ~ii~g~~--~-~--~~~----~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma 291 (370)
T d2iw1a1 230 LFVVGQD--K-P--RKF----EALAEKLGVR------SNVHFF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAIT 291 (370)
T ss_dssp EEEESSS--C-C--HHH----HHHHHHHTCG------GGEEEE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHH
T ss_pred eeccccc--c-c--ccc----cccccccccc------cccccc-cc--ccccccccccccccccccccccccceeeeccc
Confidence 5555432 1 1 123 3344433321 135543 44 35799999999999999999999999999999
Q ss_pred hccCCCceEEEeCCCCchhhc--cCceEEE-CCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHH
Q 005855 482 CQDLKKGVLILSEFAGAAQSL--GAGAILV-NPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (673)
Q Consensus 482 ~~~~~~g~lVlSe~aG~~~~l--g~~gllV-nP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (673)
|| .|+|+|+.+|..+.+ |.+|.++ +|.|++++|++|.++|+++ +.++++.++++++++++++..|.++..+.
T Consensus 292 ~G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~-~~~~~~~~~ar~~~~~~~~~~~~~~~~~i 366 (370)
T d2iw1a1 292 AG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADI 366 (370)
T ss_dssp HT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHH
T ss_pred CC----eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 95 899999999999988 5677655 7899999999999999864 46777888899999999999999877665
Q ss_pred HH
Q 005855 559 LN 560 (673)
Q Consensus 559 L~ 560 (673)
++
T Consensus 367 i~ 368 (370)
T d2iw1a1 367 IT 368 (370)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.75 E-value=5.4e-18 Score=160.06 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=114.2
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
..+++|||+++.||+..+++|++++ |+. .|+++|..+ +.+.++.+.+++.+.. ...|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~----~l~ivg~~~--~~~~~~~~~~~~~~~~-----------~~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFS--KGDHAERYARKIMKIA-----------PDNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCC--TTSTHHHHHHHHHHHS-----------CTTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCC----eEEEEEecc--cccchhhhhhhhcccc-----------cCcEEE
Confidence 5688999999999999999999876 443 367677543 2344545555544331 124665
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAI 521 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI 521 (673)
.+.++.+++..+|+.||++++||..||+|++++|||+|| .|+|+|..+|..+.+ +.+|+++++ |+++++++|
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i 145 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAM 145 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHH
T ss_pred -eeccccccccccccccccccccccccccccccccccccc----ccceeecCCcceeeecCCcccccCCC-CHHHHHHHH
Confidence 589999999999999999999999999999999999995 999999999999887 567888775 899999999
Q ss_pred HHHhcCCHHHH
Q 005855 522 ARALNMSPEER 532 (673)
Q Consensus 522 ~~aL~m~~~er 532 (673)
.++++++...+
T Consensus 146 ~~l~~~~~~~~ 156 (166)
T d2f9fa1 146 KKVSKNPDKFK 156 (166)
T ss_dssp HHHHHCTTTTH
T ss_pred HHHHhCHHHHH
Confidence 99999875333
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.30 E-value=3.5e-07 Score=87.17 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=50.8
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
|||||+||||++..++| ....++++++++|++|.+ ++.|+|+|||+...|+..+....
T Consensus 2 Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~~~ 59 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPLDI 59 (229)
T ss_dssp EEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCSSC
T ss_pred EEEEEecCCCCCCCCCh---------hhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCccc
Confidence 89999999999987777 567789999999999986 57899999999999998886544
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=5.5e-05 Score=73.94 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=45.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-+||++|+||||.+. ...+++++.++|++|.+. ...|+|+|||+...+.+++..+
T Consensus 4 iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l 58 (271)
T d1rkqa_ 4 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKEL 58 (271)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHT
T ss_pred eeEEEEeCCccccCC--------------CCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHh
Confidence 478999999999863 234578999999999876 5789999999999888777653
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=0.00011 Score=69.65 Aligned_cols=54 Identities=28% Similarity=0.384 Sum_probs=43.4
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..||++||+||||++. ....+++++++|++|.+ ++.++++|||+...+...+..
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~ 55 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGN 55 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCT
T ss_pred CCEEEEEcCcCCeeCC--------------CCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhh
Confidence 4689999999999963 24568999999999975 678999999999776665543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=97.37 E-value=0.0001 Score=71.98 Aligned_cols=62 Identities=13% Similarity=0.224 Sum_probs=49.5
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
++++.+.=+++++|+||||.... ...++++++++|++|.+. ...|+++|||+...+...+..
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-Gi~v~i~TGR~~~~~~~~~~~ 64 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGE 64 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCH
T ss_pred ccCcccCccEEEEECCCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHH
Confidence 44566667899999999998431 234678999999999764 788999999999888877764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.30 E-value=7.3e-05 Score=73.04 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=45.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
|||++|+||||.... ...++++++++|++|.+. ...|+++|||+...+.+.+..+.
T Consensus 3 Kli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~~l~ 58 (269)
T d1rlma_ 3 KVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELK 58 (269)
T ss_dssp CEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTT
T ss_pred EEEEEeCCccCcCCC-------------CcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhC
Confidence 589999999998632 223457899999999885 46899999999999998887654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=97.16 E-value=0.00023 Score=69.71 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=46.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+||++|+||||... ...++++++++|++|.+. ...|+++|||+...+...+....
T Consensus 2 Kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~~-Gi~~~i~TGR~~~~~~~~~~~l~ 56 (285)
T d1nrwa_ 2 KLIAIDLDGTLLNS--------------KHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLG 56 (285)
T ss_dssp CEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGT
T ss_pred eEEEEECCccccCC--------------CCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhC
Confidence 68999999999963 233578999999999885 57899999999999988887754
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00018 Score=67.79 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=43.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..|+|+|+||||.... ...+++.+++|++|.+. ...++++|||+...+.+.+...
T Consensus 4 ~~li~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-Gi~~~i~TGR~~~~~~~~~~~~ 58 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTL 58 (232)
T ss_dssp CEEEEEECTTTTSCSS--------------CCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHT
T ss_pred CEEEEEECCCCccCCc--------------CcCCHHHHHHHHHHHHC-CCEEEEEeCCChhhchhHHHHh
Confidence 4589999999999632 23567889999999874 6889999999999888777654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.08 E-value=0.00026 Score=66.55 Aligned_cols=55 Identities=13% Similarity=0.218 Sum_probs=44.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
=++++||+||||+.. ...+++++.+.|++|.+. ...|+++|||+...++..+...
T Consensus 2 iK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~~-gi~v~~~TGR~~~~~~~~~~~~ 56 (230)
T d1wr8a_ 2 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILI 56 (230)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHH
T ss_pred ceEEEEecCCCCcCC--------------CCccCHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHhc
Confidence 379999999999863 234678999999999875 5789999999999888776543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.96 E-value=0.00041 Score=67.76 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=40.5
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
|||++|+||||++. ...++++++++|++|.+ ...++++|||+...+...+.
T Consensus 3 Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~ 53 (267)
T d1nf2a_ 3 RVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEK 53 (267)
T ss_dssp CEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHH
T ss_pred EEEEEeCCccccCC--------------cCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHH
Confidence 68999999999863 23467899999999986 46799999999866555443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.00045 Score=64.91 Aligned_cols=51 Identities=27% Similarity=0.376 Sum_probs=38.4
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
|++||+||||.+. ...++++++++|++|.+ ++.++|+|||+.......+..
T Consensus 3 i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~--~g~~~i~tgrr~~~~~~~~~~ 53 (244)
T d2fuea1 3 LCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS--RVQIGVVGGSDYCKIAEQLGD 53 (244)
T ss_dssp EEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHSS
T ss_pred EEEEccccCccCC--------------CCcCCHHHHHHHHHHHh--CCCEEEEecCChhhhhhhhhh
Confidence 4446999999974 23467899999999977 467889999988765555443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.92 E-value=0.00065 Score=60.15 Aligned_cols=60 Identities=17% Similarity=0.120 Sum_probs=44.8
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
..++.+.++||+||||+...... ......-..+.|.+.+.+.|+.|.+. ...|+++|||+
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~--~~~~~~~~~~~~~p~v~~~l~~l~~~-G~~Iii~T~R~ 62 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRG--PYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRE 62 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCC--TTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCC--cCCccccccCccCHHHHHHHHHHHhc-cCeEEEEecCc
Confidence 34678899999999998754321 11111223568899999999999975 68999999997
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.84 E-value=0.00038 Score=66.13 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=41.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
++++||+||||+.. ...+++++.++|+.|.+. ...|+++|||+...++....
T Consensus 4 Kli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~~-g~~v~~~TGr~~~~~~~~~~ 55 (225)
T d1l6ra_ 4 RLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKI 55 (225)
T ss_dssp CEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHH
T ss_pred EEEEEecCCCCcCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCchhhhHHHHH
Confidence 78999999999953 234568999999999986 67899999999986665543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.81 E-value=0.00048 Score=65.37 Aligned_cols=53 Identities=21% Similarity=0.147 Sum_probs=42.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+++|+|+||||.+.. . +++.+++|++|.+. ...|+++|||+...+..++..++
T Consensus 3 Kli~~DlDGTLl~~~-------------~---~~~~~~ai~~l~~~-G~~~~~aTGR~~~~~~~~~~~~~ 55 (243)
T d1wzca1 3 RLIFLDIDKTLIPGY-------------E---PDPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELE 55 (243)
T ss_dssp EEEEECCBTTTBSSS-------------C---SGGGHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCCCCC-------------C---CHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhc
Confidence 789999999998531 1 24677889998876 68899999999998888877654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.69 E-value=0.00045 Score=67.18 Aligned_cols=50 Identities=14% Similarity=0.281 Sum_probs=40.0
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~ 655 (673)
++||+|+||||.+.. ....+++++++|++|.+. ...|+++|||+...++.
T Consensus 2 k~if~DlDGTL~~~~-------------~~~i~~~~~~al~~l~~~-gi~v~~~TGR~~~~~~~ 51 (260)
T d2rbka1 2 KALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHAK-GLKIFIATGRPKAIINN 51 (260)
T ss_dssp CEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHHT-TCEEEEECSSCGGGCCS
T ss_pred eEEEEECCCCCcCCC-------------CCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHH
Confidence 689999999998642 234578999999999885 56899999999875543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.45 E-value=0.00052 Score=65.83 Aligned_cols=55 Identities=15% Similarity=0.067 Sum_probs=36.7
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
++.||++|+||||++.. ..| +.+. .+.++.+ ....|+++|||+...+++++....
T Consensus 2 ~~~li~~DlDGTL~~~~--------------~~~-~~~~-~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~ 56 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ--------------QAL-EHLQ-EYLGDRR-GNFYLAYATGRSYHSARELQKQVG 56 (244)
T ss_dssp CSEEEEECTBTTTBSCH--------------HHH-HHHH-HHHHTTG-GGEEEEEECSSCHHHHHHHHHHHT
T ss_pred CceEEEEECcccCCCCC--------------CCH-HHHH-HHHHHHc-CCCEEEEECCCCHHHHHHHHHHcC
Confidence 46789999999998631 111 2333 3333332 256788999999999988876543
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.90 E-value=0.0053 Score=53.33 Aligned_cols=55 Identities=18% Similarity=0.197 Sum_probs=41.8
Q ss_pred EEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhH---HHHhcc
Q 005855 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKVLDL 659 (673)
Q Consensus 594 l~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L---~~~~~~ 659 (673)
+++|+||||+... .+ ....|-+.+++.|+.|.+. ...|++.|+|+.... .+|+..
T Consensus 3 i~vDiDGTl~~~~-~~---------~~~kPi~~~Ie~l~~L~~~-G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 3 IAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEcCCCcCCCC-CC---------ccccccHHHHHHHHHHHHC-CCeEEEEecCCCcchHHHHHHHHH
Confidence 7899999998642 23 3457889999999999876 578999999987543 445543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=95.69 E-value=0.14 Score=50.67 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=64.7
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc--------hhhc--cCceEEECCC-
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW- 512 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~--------~~~l--g~~gllVnP~- 512 (673)
+.+.+++.+ ++..+|+||..+- . -+..|+|++| .|+|+.-+.+- ++.+ ...|+.+++.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hgG---~-~t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHDS---A-GTTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEESC---H-HHHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EecccCHHH---HHhhccEEEecCc---h-HHHHHHHHhC----CcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCC
Confidence 357787654 5788999997653 3 4788999995 78888766553 2233 1357888775
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+.++++++|.++|+.+- +++.+++.+.++.....+=++.+.+.|
T Consensus 343 ~~~~~l~~~i~~~l~~~~---r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEI---RARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp CCHHHHHHHHHHHTSTTH---HHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 48999999999997432 233344444454434444444444333
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=95.36 E-value=0.014 Score=50.70 Aligned_cols=48 Identities=19% Similarity=0.220 Sum_probs=38.1
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
-|++|+||||+...... . ..+.|-+.+++.|+.|-+. .++++|.|+|.
T Consensus 3 ~i~~DiDGTI~~~~~~~------y--~~~~P~~~~Ie~l~~l~~~-G~~Iii~TaR~ 50 (124)
T d1xpja_ 3 KLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQL-GFEIVISTARN 50 (124)
T ss_dssp EEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred EEEEeCCCCeECCCCCC------c--CccCcCHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 47899999998643211 0 3578999999999999775 68999999995
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.93 E-value=0.059 Score=48.46 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=38.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
++++|||.||||....... ..... -....+.|.+.++|+.|.+. .-.++|+|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~-~~~~~--~~~~~~~pgv~e~L~~L~~~-g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSD-FQVDR--FDKLAFEPGVIPQLLKLQKA-GYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--C-CCCCS--GGGCCBCTTHHHHHHHHHHT-TEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCC-CccCC--HHHceECccHHHHHHHHHHc-CCceeeecccc
Confidence 5789999999999643211 00111 13456788999999999875 56889999764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.55 E-value=0.052 Score=48.43 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=40.0
Q ss_pred CeEEEEcccccccCCCCCCCCC-------Ccc---ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRR-------GDQ---IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~-------~~~---~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
.++++||+||||++........ ... .......+-|.+.++|+.|.+. .-.++|+|+.....
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~-G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSL-GVPVAAASRTSEIQ 75 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHT-TCCEEEEECCSCHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHC-CCcEEEEeccccch
Confidence 4789999999998743211100 000 0112356788999999999985 46888999766543
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=93.28 E-value=4.5 Score=40.26 Aligned_cols=242 Identities=14% Similarity=0.113 Sum_probs=139.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+.+..+| |+|.||.=-.-.++..+.....++||++ +|--..+.++... ..++..+-+ ..+|+---.+..+.++.
T Consensus 83 ~l~~~kP-D~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~~--~~de~~R~~iskls~~hf~~t~~~~~~L 158 (373)
T d1v4va_ 83 ALKEMGA-DYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKEP--FPEEANRRLTDVLTDLDFAPTPLAKANL 158 (373)
T ss_dssp HHHHTTC-SEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTSS--TTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred hhhhcCc-ccccccccCccchhHHHHHHHhhhhhee-ecccccccccccC--cchhhhhhhhccccceeeecchhhhhhh
Confidence 3344455 8999987666666666666667788875 2332333333332 223433321 24666666666666655
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEee-cCcChhhhhhhhcCChhHHHHHHHHH---H-hcCCceEEEeecccccCC
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQE---T-FAGRKVMLGVDRLDMIKG 377 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP-~GID~~~f~~~~~~~~~~~~~~~lr~---~-~~~~~iIl~VgRLd~~KG 377 (673)
++ .|.+ ..+|.++. .++|. +... ..+.+ . ..++.+++..-|....+.
T Consensus 159 ~~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~ 210 (373)
T d1v4va_ 159 LK-----EGKR-----------EEGILVTGQTGVDA--VLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPL 210 (373)
T ss_dssp HT-----TTCC-----------GGGEEECCCHHHHH--HHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGG
T ss_pred hh-----hccc-----------ccceeecccchhhH--HHhh----------hhhcccccccccccceeEEeccccccch
Confidence 42 1211 12232221 13332 1110 00100 0 124567778889888888
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHH
Q 005855 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (673)
Q Consensus 378 i~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (673)
....+.++..+.+..++. .++... +. . +. ....+.+.... ...+.+ ...++..++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~----~~i~p~-~~--~-~~---~~~~~~~~~~~---------~~n~~~-~~~l~~~~~l~ll 269 (373)
T d1v4va_ 211 LSDLAQALKRVAEAFPHL----TFVYPV-HL--N-PV---VREAVFPVLKG---------VRNFVL-LDPLEYGSMAALM 269 (373)
T ss_dssp HHHHHHHHHHHHHHCTTS----EEEEEC-CS--C-HH---HHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccc----eeeeee-cc--c-cc---chhhhhhhhcc---------ccccee-eccchHHHHHHHh
Confidence 899999999988887654 233222 21 1 21 12222222111 124554 5689999999999
Q ss_pred HHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhh-ccCceEEECCCCHHHHHHHHHHHhcCC
Q 005855 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVANAIARALNMS 528 (673)
Q Consensus 458 ~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~-lg~~gllVnP~D~~~lA~aI~~aL~m~ 528 (673)
+.|++++-.| |-...||.+.+ .|+|.=...|-.++ +..+..++-+.|.+++..+|.++|+.+
T Consensus 270 ~~s~~vignS-----ssgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 270 RASLLLVTDS-----GGLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp HTEEEEEESC-----HHHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred hhceeEeccc-----chhhhcchhhc----CcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCH
Confidence 9999998777 36778999994 77776655555544 322333344569999999999999753
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=92.55 E-value=0.062 Score=49.90 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=33.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+.+++.+.|+.|.+.++-.++|+||.+...++..+....
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~g 130 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPG 130 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTT
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhc
Confidence 4668999999999987767899999999998888876544
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=91.49 E-value=0.38 Score=47.09 Aligned_cols=90 Identities=14% Similarity=0.071 Sum_probs=59.9
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
++ +.+.+++. ++|..+|++| .-|-..++.|++++| .|+|+--+.+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~p~~---~~l~~~~~~V----~hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 287 CF-AIGEVNHQ---VLFGRVAAVI----HHGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp EE-ECSSCCHH---HHGGGSSEEE----ECCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EEeccCHH---HHHhhcCEEE----ecCCchHHHHHHHhC----CCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 44 46778765 5578899998 357777888999995 7777765544 22222 1357888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~ 545 (673)
++++++++|.++|+ + +-+++.+++.+.+++
T Consensus 355 ~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 355 TFDSLSAALATALT--P-ETHARATAVAGTIRT 384 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHh
Confidence 69999999999995 3 233344444444444
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=90.31 E-value=14 Score=40.66 Aligned_cols=141 Identities=10% Similarity=0.067 Sum_probs=95.7
Q ss_pred CCceEEEeecccccCChHHHHHH----HHHHHHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~A----f~~ll~~~P~~-~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~ 436 (673)
+..+++++=|+..-|-....+.- +.++.+ .|+. ...+++|..|....++.. -+++-+.|.+++.-||..=...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~-~~~~~~~P~q~IFaGKAhP~d~~-gK~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNKFVVPRTVMIGGKAAPGYHM-AKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTSCCCCEEEEEECCCCTTCHH-HHHHHHHHHHHHHHHTTCTTTG
T ss_pred chhhhhheeechhhhhhhhhHhhHHHHHHHhhh-cccCCCCCeEEEEeCCCCCccHH-HHHHHHHHHHHHHHHhcChhhc
Confidence 56788999999988888774443 345443 4432 225777766655544432 3456667777777676421111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEE
Q 005855 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 509 (673)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllV 509 (673)
+...|+|+. ..+-.--..++.+|||.+.+|+ .|.=|..-+=||.- |++.+|..-|+--++ +.||+++
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEcC-CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc-----CCeeeccccchHHHHHHhcCcccEEEe
Confidence 223578765 4566666788999999999998 48888888888775 889999999986554 4678887
Q ss_pred C
Q 005855 510 N 510 (673)
Q Consensus 510 n 510 (673)
-
T Consensus 701 G 701 (824)
T d2gj4a1 701 G 701 (824)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=90.30 E-value=4.8 Score=44.29 Aligned_cols=146 Identities=16% Similarity=0.180 Sum_probs=100.3
Q ss_pred CCceEEEeecccccCChHHHHHHHHHH---HHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcc--ccCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKF---LEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING--RFGT 435 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~l---l~~~P~~-~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~--~~g~ 435 (673)
+..+++++=|+..-|-....+.-..++ +...|+. +..+++|..|....++.+ -+++-+.|.+++..||. .++
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~-gK~iIk~I~~va~~in~dp~~~- 602 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVADVINNDPLVG- 602 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHH-HHHHHHHHHHHHHHHHTCTTTG-
T ss_pred hhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHH-HHHHHHHHHHHHHHhcCChhhc-
Confidence 566889999999999988866655544 3334432 124777766655544432 34566677777777764 121
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEE
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAIL 508 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gll 508 (673)
+...|+|+. ..+-+--..+..+|||.+.+|. .|.-|..-+=||.- |++.+|..-|.--++ +++|++
T Consensus 603 -~~~kVVFle-nYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~ 675 (796)
T d1l5wa_ 603 -DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFI 675 (796)
T ss_dssp -GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred -cceeEEEeC-CCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEE
Confidence 122577764 5566666788999999999998 49999988888875 899999999986554 478998
Q ss_pred ECCCCHHHH
Q 005855 509 VNPWNITEV 517 (673)
Q Consensus 509 VnP~D~~~l 517 (673)
+- .+.+++
T Consensus 676 fG-~~~~ev 683 (796)
T d1l5wa_ 676 FG-HTVEQV 683 (796)
T ss_dssp CS-CCHHHH
T ss_pred ec-CchHHH
Confidence 84 334443
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=89.50 E-value=0.21 Score=45.14 Aligned_cols=52 Identities=10% Similarity=0.083 Sum_probs=38.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
..+|||.||||........ .....++.+.+.++|+.|.+. .-.++|+|..+.
T Consensus 3 ~Av~~DrDGtl~~~~~y~~------~~~~~~~~~gv~e~l~~L~~~-g~~~~ivTNq~~ 54 (182)
T d2gmwa1 3 PAIFLDRDGTINVDHGYVH------EIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSG 54 (182)
T ss_dssp CEEEECSBTTTBCCCSSCC------SGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTH
T ss_pred CEEEEeCCCCccCCCCCCC------CHHHeeECCCHHHHHHHHhhc-Cchhhhhhccch
Confidence 4699999999986433221 114567789999999999875 468899998863
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=89.44 E-value=0.41 Score=47.17 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=64.3
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
++ +.+.+++.+ ++..+|+||. .|-.-+..||+++| .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 288 v~-~~~~~p~~~---ll~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 288 CF-AIDEVNFQA---LFRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp EE-EESSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EEeccCcHH---HhhhccEEEe----cCCchHHHHHHHhC----CCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 44 457788664 5678999984 56667789999995 7777766655 22223 1357888875
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAET 554 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 554 (673)
+++.++++|.++|+ + +.+++.++..+.+.......=++.
T Consensus 356 ~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ 394 (401)
T d1rrva_ 356 TFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADL 394 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHHHH
Confidence 58999999999995 3 334444455455544444443333
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=88.48 E-value=0.19 Score=47.56 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=34.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHh
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVL 657 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~ 657 (673)
..++||.||||.... .+.+.+.++|++|.+. .-.++++| +|+...+.+.+
T Consensus 3 k~v~fDlDGTL~~~~---------------~~i~~a~~~i~~l~~~-g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 3 QGYLIDLDGTIYLGK---------------EPIPAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CEEEECCBTTTEETT---------------EECHHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHH
T ss_pred CEEEEcCCCccEeCC---------------CcCccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHH
Confidence 468999999997531 1236778899998886 44566665 67777766554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.74 E-value=0.04 Score=49.70 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=27.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKV 656 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~ 656 (673)
+|++||.||||++. .+++|+......+++.|||+.-..+++
T Consensus 3 kli~fDlDGTLl~e------------------------~~~~~a~~~Gi~~~~~tgR~~~~~~~~ 43 (206)
T d1rkua_ 3 EIACLDLEGVLVPE------------------------IWIAFAEKTGIDALKATTRDIPDYDVL 43 (206)
T ss_dssp EEEEEESBTTTBCC------------------------HHHHHHHHHTCGGGGCCTTTCCCHHHH
T ss_pred EEEEEcCccchHHH------------------------HHHHHHHHcCCHHHHHHCCCCCCHHHH
Confidence 79999999999851 234555554556788899976433333
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=87.29 E-value=0.18 Score=47.09 Aligned_cols=53 Identities=19% Similarity=0.309 Sum_probs=38.5
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
+...+|||.||||....+.+. ...+..+-+.+.++|+.|.+. .-.++|+|..+
T Consensus 22 ~~~Aif~DrDGtl~~~~~y~~------~~~~~~l~pgv~e~L~~L~~~-G~~l~IvTNQ~ 74 (209)
T d2o2xa1 22 HLPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANRA-GIPVVVVTNQS 74 (209)
T ss_dssp SCCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECH
T ss_pred CCCEEEEeCCCCeECCCCCCC------CHHHeEecccHHHHHHHHHhh-CCeEEEecccc
Confidence 446799999999986443321 113456789999999999875 46899999643
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.99 E-value=0.33 Score=45.83 Aligned_cols=51 Identities=14% Similarity=0.191 Sum_probs=35.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~ 658 (673)
+.++||.||||.... . +-+...++++.|-+. .-.|+++| +|+.+.+.+.|.
T Consensus 4 k~VifDlDGTL~~~~-------------~--~i~~a~e~i~~l~~~-g~~~~~~TN~~~~~~~~~~~~l~ 57 (250)
T d2c4na1 4 KNVICDIDGVLMHDN-------------V--AVPGAAEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFA 57 (250)
T ss_dssp CEEEEECBTTTEETT-------------E--ECTTHHHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHH
T ss_pred CEEEEECCCeeEECC-------------C--cCccHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHHHh
Confidence 679999999998531 1 223567888888765 34555564 788888877654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=86.65 E-value=0.31 Score=46.08 Aligned_cols=51 Identities=20% Similarity=0.213 Sum_probs=35.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~ 658 (673)
++++||.||||.... .+-+.+.++|+.|.+. .-.++++| +|+...+.+.+.
T Consensus 8 k~vlFDlDGTL~~~~---------------~~i~~a~e~l~~l~~~-g~~~~~~TN~~~~~~~~~~~~~~ 61 (261)
T d1vjra_ 8 ELFILDMDGTFYLDD---------------SLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLR 61 (261)
T ss_dssp CEEEECCBTTTEETT---------------EECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHH
T ss_pred CEEEEeCCCeeEECC---------------ccCchHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHH
Confidence 689999999998631 1235667888888765 45677776 667776666553
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.85 E-value=0.4 Score=44.26 Aligned_cols=60 Identities=13% Similarity=0.228 Sum_probs=37.8
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
.+.++++++||.||||.-... +.-.......-....+.+.++|+.|.++ .-.++|||..+
T Consensus 17 ~~~~~Kia~fDrDGtLik~~~--~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ~ 76 (195)
T d1yj5a1 17 VKPQGKVAAFDLDGTLITTRS--GKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 76 (195)
T ss_dssp CCCCSCEEEECSBTTTEECSS--SCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEECH
T ss_pred CCCcCcEEEEECCCceEeeCC--CCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCcc
Confidence 345678888899999974321 1000000001122468999999999886 57899999863
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=83.38 E-value=0.51 Score=42.60 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=32.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.++|+.|.+ +-.++|+|+.....++..+....
T Consensus 81 ~~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~ 119 (207)
T d2hdoa1 81 IELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYP 119 (207)
T ss_dssp CEECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSG
T ss_pred cccccchhhhhhhhcc--ccccccccccccccccccccccc
Confidence 4567899999999964 57899999999999988887654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.54 E-value=0.74 Score=41.59 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=32.6
Q ss_pred ccCCChhHHHHHHHHhcCCCCeEEEEcCCCHH----------hHHHHhcccc
Q 005855 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN----------VLDKVLDLVL 661 (673)
Q Consensus 620 ~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~----------~L~~~~~~~~ 661 (673)
..+|-++..++|+.|.+.....|+|+|.+... -|++.|+.++
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~ 123 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDF 123 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGG
T ss_pred hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCC
Confidence 35788999999999998766678888987632 4788877765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=81.96 E-value=0.56 Score=42.36 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=32.3
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+.+.+.|+.|.+. .-.++|+||.+...++..+....
T Consensus 94 ~~l~~~~~~~L~~L~~~-g~~~~i~tn~~~~~~~~~l~~~g 133 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQ-GYILAVVTNKPTKHVQPILTAFG 133 (224)
T ss_dssp CEECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHhcc-CCcccccccccHHHHHHHHHhcC
Confidence 34678999999999876 57899999999988877765543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=80.59 E-value=0.69 Score=43.51 Aligned_cols=51 Identities=8% Similarity=0.187 Sum_probs=34.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~ 658 (673)
+.++||.||||.... .+-+...++|+.|.+. .-.++++| .|+.+.+.+.+.
T Consensus 3 k~vlFDlDGTL~~~~---------------~~i~~a~e~l~~l~~~-g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 3 KGYLIDLDGTIYKGK---------------DRIPAGEDFVKRLQER-QLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CEEEEECBTTTEETT---------------EECHHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHH
T ss_pred CEEEEcCcCceEECC---------------CcCccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHHH
Confidence 468999999998631 1236777888887665 34566665 567777776654
|